Pfam ID Description Accession Interpro ID GO ID
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270



zf-C2H2 forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270
 PDB IPFAM 3DID ME DPEA PE GPE DIPD RDFF KGIDDI
GATA GATA zinc finger PF00320 IPR000679
GO:0003700
GO:0006355
GO:0008270
GO:0043565
 PDB IPFAM FUSION
LIM LIM domain PF00412 IPR001781
GO:0008270
 PDB 3DID
Homeobox Homeobox domain PF00046 IPR001356
GO:0003700
GO:0006355
GO:0043565
 HCP ME FUSION GPE RDFF KGIDDI
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
 HCP ME PE GPE RDFF KGIDDI INSITE DOMAINGA
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
 HCP ME FUSION PE GPE KGIDDI
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
HCP ME FUSION PE
zf-C4 Zinc finger, C4 type (two domains) PF00105 IPR001628
GO:0003700
GO:0005634
GO:0006355
GO:0008270
GO:0043565
 HCP ME
Ribosomal_S12 Ribosomal protein S12 PF00164 IPR006032
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 HCP ME DPEA PE
bZIP_1 bZIP transcription factor PF00170 IPR011616
GO:0003700
GO:0006355
GO:0043565
GO:0046983
 HCP ME FUSION INSITE
Myb_DNA-binding Myb-like DNA-binding domain PF00249 IPR014778
HCP ME RDFF
2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF00389 IPR006139
GO:0008152
GO:0016616
GO:0051287
 HCP ME GPE
WD40 WD domain, G-beta repeat PF00400 IPR019781
HCP ME GPE RDFF DOMAINGA
Bromodomain Bromodomain PF00439 IPR001487
HCP ME PVALUE RDFF KGIDDI
TPR_1 Tetratricopeptide repeat PF00515 IPR001440
HCP ME FUSION RDFF INSITE
PDZ PDZ domain (Also known as DHR or GLGF) PF00595 IPR001478
GO:0005515
 HCP ME RDFF
UBA UBA/TS-N domain PF00627 IPR000449
HCP ME
BTB BTB/POZ domain PF00651 IPR013069
GO:0005515
 HCP ME FUSION DIPD
RA Ras association (RalGDS/AF-6) domain PF00788 IPR000159
GO:0007165
 HCP ME
Hist_deacetyl Histone deacetylase domain PF00850 IPR000286
HCP ME KGIDDI
SET SET domain PF00856 IPR001214
HCP ME FUSION
MATH MATH domain PF00917 IPR002083
HCP ME RDFF
2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826 IPR006140
GO:0016616
GO:0048037
 HCP ME KGIDDI
MH2 MH2 domain PF03166 IPR001132
GO:0005622
GO:0006355
 HCP ME
SH3_1 SH3 domain PF00018 IPR001452
MCP RDFF DOMAINGA
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
GO:0003677
 MCP RDFF INSITE
Metallophos Calcineurin-like phosphoesterase PF00149 IPR004843
GO:0016787
 MCP PVALUE DOMAINGA
Proteasome Proteasome A-type and B-type PF00227 IPR001353
GO:0004298
GO:0005839
GO:0051603
 MCP PE RDFF INSITE
Fork_head Fork head domain PF00250 IPR001766
GO:0003700
GO:0005634
GO:0006355
GO:0043565
 MCP FUSION RDFF
UCH Ubiquitin carboxyl-terminal hydrolase PF00443 IPR001394
GO:0004221
GO:0006511
 MCP RDFF DOMAINGA
FHA FHA domain PF00498 IPR000253
MCP PVALUE RDFF
Dynein_light Dynein light chain type 1 PF01221 IPR001372
GO:0003777
GO:0005875
GO:0007017
 MCP DPEA PE GPE
KRAB KRAB box PF01352 IPR001909
GO:0003676
GO:0005622
GO:0006355
 MCP FUSION GPE
LSM LSM domain PF01423 IPR001163
MCP GPE RDFF
FtsJ FtsJ-like methyltransferase PF01728 IPR002877
GO:0003676
GO:0008168
GO:0032259
 MCP RDFF INSITE
MOZ_SAS MOZ/SAS family PF01853 IPR002717
GO:0005634
GO:0016747
GO:0045449
 MCP FUSION PE
ODC_AZ Ornithine decarboxylase antizyme PF02100 IPR002993
GO:0004857
GO:0008073
 MCP DPEA PE GPE
MAM33 Mitochondrial glycoprotein PF02330 IPR003428
GO:0005759
 MCP DPEA PE RDFF
TAF4 Transcription initiation factor TFIID component TAF4 family PF05236 IPR007900
GO:0005669
GO:0006352
GO:0016986
 MCP PE RDFF
ABC_tran ABC transporter PF00005 IPR003439
GO:0005524
GO:0016887
 LCP KGIDDI
HLH Helix-loop-helix DNA-binding domain PF00010 IPR001092
GO:0030528
GO:0045449
 LCP PE
HSP70 Hsp70 protein PF00012 IPR013126
LCP GPE
KH_1 KH domain PF00013 IPR018111
GO:0003723
 LCP RDFF
Actin Actin PF00022 IPR004000
GO:0005515
 LCP RDFF
Ank Ankyrin repeat PF00023 IPR002110
LCP GPE
efhand EF hand PF00036 IPR018248
LCP PE
Kazal_1 Kazal-type serine protease inhibitor domain PF00050 IPR002350
LCP PE
Notch LNR domain PF00066 IPR000800
GO:0016020
GO:0030154
 LCP DPEA
Ras Ras family PF00071 IPR013753
LCP RDFF
RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) PF00078 IPR000477
GO:0003723
GO:0003964
GO:0006278
 LCP FUSION
Peptidase_S8 Subtilase family PF00082 IPR000209
GO:0004252
GO:0006508
 LCP DOMAINGA
Tubulin Tubulin/FtsZ family, GTPase domain PF00091 IPR003008
GO:0043234
GO:0051258
 LCP GPE
VWC von Willebrand factor type C domain PF00093 IPR001007
LCP PE
zf-CCHC Zinc knuckle PF00098 IPR001878
GO:0003676
GO:0008270
 LCP RDFF
Alpha-amylase Alpha amylase, catalytic domain PF00128 IPR006047
GO:0003824
GO:0005975
GO:0043169
 LCP DOMAINGA
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) PF00130 IPR002219
GO:0023034
 LCP KGIDDI
Mito_carr Mitochondrial carrier protein PF00153 IPR018108
LCP DOMAINGA
Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain PF00172 IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
 LCP RDFF
HSP90 Hsp90 protein PF00183 IPR020576
LCP GPE
DnaJ DnaJ domain PF00226 IPR001623
GO:0031072
 LCP FUSION
Ribosomal_L22 Ribosomal protein L22p/L17e PF00237 IPR001063
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
14-3-3 14-3-3 protein PF00244 IPR000308
GO:0019904
 LCP INSITE
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase PF00254 IPR001179
GO:0006457
 LCP RDFF
Tropomyosin Tropomyosin PF00261 IPR000533
LCP DPEA
DEAD DEAD/DEAH box helicase PF00270 IPR011545
GO:0003676
GO:0005524
GO:0008026
 LCP RDFF
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
 LCP RDFF
Ribosomal_L23 Ribosomal protein L23 PF00276 IPR013025
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
Acid_phosphat_A Histidine acid phosphatase PF00328 IPR000560
GO:0003993
 LCP INSITE
TBP Transcription factor TFIID (or TATA-binding protein, TBP) PF00352 IPR000814
GO:0003677
GO:0003702
GO:0006355
GO:0006367
 LCP PE
PFK Phosphofructokinase PF00365 IPR000023
GO:0003872
GO:0005945
GO:0006096
 LCP DOMAINGA
FERM_M FERM central domain PF00373 IPR019748
LCP KGIDDI
TFIIB Transcription factor TFIIB repeat PF00382 IPR013150
GO:0003743
GO:0005515
GO:0006413
 LCP RDFF
Chromo 'chromo' (CHRromatin Organisation MOdifier) domain PF00385 IPR000953
GO:0000785
GO:0003682
GO:0005634
GO:0006333
 LCP PE
RrnaAD Ribosomal RNA adenine dimethylase PF00398 IPR001737
GO:0000154
GO:0000179
GO:0008649
 LCP INSITE
ADK Adenylate kinase PF00406 IPR000850
GO:0005524
GO:0006139
GO:0019205
 LCP DOMAINGA
Ribosomal_S8 Ribosomal protein S8 PF00410 IPR000630
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
Pkinase_C Protein kinase C terminal domain PF00433 IPR017892
GO:0004674
GO:0005524
GO:0006468
 LCP KGIDDI
Transketolase_N Transketolase, thiamine diphosphate binding domain PF00456 IPR005474
LCP DOMAINGA
Inositol_P Inositol monophosphatase family PF00459 IPR000760
GO:0004437
 LCP RDFF
SQS_PSY Squalene/phytoene synthase PF00494 IPR002060
GO:0009058
GO:0016740
 LCP DOMAINGA
AMP-binding AMP-binding enzyme PF00501 IPR000873
GO:0003824
GO:0008152
 LCP DOMAINGA
HMG_box HMG (high mobility group) box PF00505 IPR000910
GO:0003677
GO:0005634
 LCP GPE
Arm Armadillo/beta-catenin-like repeat PF00514 IPR000225
LCP RDFF
RHD Rel homology domain (RHD) PF00554 IPR011539
GO:0003700
GO:0005634
GO:0045449
 LCP GPE
LRR_1 Leucine Rich Repeat PF00560 IPR001611
GO:0005515
 LCP PE
Abhydrolase_1 alpha/beta hydrolase fold PF00561 IPR000073
LCP DOMAINGA
CBS CBS domain pair PF00571 IPR000644
LCP DOMAINGA
SpoU_methylase SpoU rRNA Methylase family PF00588 IPR001537
GO:0003723
GO:0006396
GO:0008173
 LCP PE
RhoGAP RhoGAP domain PF00620 IPR000198
GO:0005622
GO:0007165
 LCP DOMAINGA
SPRY SPRY domain PF00622 IPR003877
LCP DOMAINGA
PHD PHD-finger PF00628 IPR019787
LCP FUSION
zf-RanBP Zn-finger in Ran binding protein and others PF00641 IPR001876
GO:0005622
GO:0008270
 LCP FUSION
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) PF00642 IPR000571
GO:0003676
GO:0008270
 LCP FUSION
zf-B_box B-box zinc finger PF00643 IPR000315
GO:0005622
GO:0008270
 LCP GPE
Peptidase_C2 Calpain family cysteine protease PF00648 IPR001300
GO:0004198
GO:0005622
GO:0006508
 LCP GPE
XPG_N XPG N-terminal domain PF00752 IPR006085
GO:0004518
GO:0006281
 LCP PE
ERM Ezrin/radixin/moesin family PF00769 IPR011259
GO:0005737
GO:0008092
GO:0019898
 LCP KGIDDI
DIX DIX domain PF00778 IPR001158
GO:0004871
GO:0005622
GO:0007275
 LCP GPE
PBD P21-Rho-binding domain PF00786 IPR000095
LCP DOMAINGA
PUF Pumilio-family RNA binding repeat PF00806 IPR001313
GO:0003723
 LCP PVALUE
GDI GDP dissociation inhibitor PF00996 IPR018203
LCP RDFF
Uricase Uricase PF01014 IPR002042
GO:0006144
GO:0016491
GO:0055114
 LCP PE
Ribosomal_S19e Ribosomal protein S19e PF01090 IPR001266
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
EMP24_GP25L emp24/gp25L/p24 family/GOLD PF01105 IPR000348
GO:0006810
GO:0016021
 LCP DOMAINGA
UPF0027 Uncharacterized protein family UPF0027 PF01139 IPR001233
LCP PE
Tub Tub family PF01167 IPR000007
LCP PE
Ribosomal_L31e Ribosomal protein L31e PF01198 IPR000054
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
CK_II_beta Casein kinase II regulatory subunit PF01214 IPR000704
GO:0005956
GO:0019887
 LCP INSITE
HIT HIT domain PF01230 IPR001310
LCP DIPD
Ribosomal_L24e Ribosomal protein L24e PF01246 IPR000988
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
Ribosomal_L35Ae Ribosomal protein L35Ae PF01247 IPR001780
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
Ribosomal_S21e Ribosomal protein S21e PF01249 IPR001931
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
F-actin_cap_A F-actin capping protein alpha subunit PF01267 IPR018315
LCP PE
Ribosomal_S26e Ribosomal protein S26e PF01283 IPR000892
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA
FYVE FYVE zinc finger PF01363 IPR000306
LCP FUSION
ARID ARID/BRIGHT DNA binding domain PF01388 IPR001606
GO:0003677
GO:0005622
 LCP FUSION
PCI PCI domain PF01399 IPR000717
LCP RDFF
ENTH ENTH domain PF01417 IPR001026
LCP PE
Cation_efflux Cation efflux family PF01545 IPR002524
GO:0006812
GO:0008324
GO:0016020
GO:0055085
 LCP DOMAINGA
DnaJ_C DnaJ C terminal region PF01556 IPR002939
GO:0006457
GO:0051082
 LCP GPE
Myosin_tail_1 Myosin tail PF01576 IPR002928
GO:0003774
GO:0016459
 LCP PE
G-patch G-patch domain PF01585 IPR000467
GO:0003676
GO:0005622
 LCP FUSION
CBM_14 Chitin binding Peritrophin-A domain PF01607 IPR002557
GO:0005576
GO:0006030
GO:0008061
 LCP PE
PMSR Peptide methionine sulfoxide reductase PF01625 IPR002569
GO:0016671
GO:0019538
GO:0055114
 LCP PE
ACPS 4'-phosphopantetheinyl transferase superfamily PF01648 IPR008278
GO:0000287
GO:0008897
GO:0009059
 LCP DPEA PE
Ribosomal_S27e Ribosomal protein S27 PF01667 IPR000592
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DOMAINGA
DUF28 Domain of unknown function DUF28 PF01709 IPR002876
LCP PE
IBB Importin beta binding domain PF01749 IPR002652
GO:0005634
GO:0005643
GO:0005737
GO:0006606
GO:0006886
GO:0008565
 LCP RDFF
Ribosomal_L18ae Ribosomal L18ae protein family PF01775 IPR021138
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DOMAINGA
TIL Trypsin Inhibitor like cysteine rich domain PF01826 IPR018453
LCP PE
TIG IPT/TIG domain PF01833 IPR002909
LCP PE
MMR_HSR1 GTPase of unknown function PF01926 IPR002917
GO:0005525
GO:0005622
 LCP PE
vATP-synt_AC39 ATP synthase (C/AC39) subunit PF01992 IPR002843
GO:0015078
GO:0015986
GO:0033177
 LCP PE
SCAN SCAN domain PF02023 IPR003309
GO:0003700
GO:0005634
GO:0006355
 LCP FUSION
Metallothio_5 Metallothionein family 5 PF02067 IPR000966
GO:0046872
 LCP PE
NTF2 Nuclear transport factor 2 (NTF2) domain PF02136 IPR002075
GO:0005622
GO:0006810
 LCP KGIDDI
AT_hook AT hook motif PF02178 IPR017956
GO:0003677
 LCP FUSION
GoLoco GoLoco motif PF02188 IPR003109
GO:0005096
GO:0007165
 LCP DPEA
STE STE like transcription factor PF02200 IPR003120
GO:0003700
GO:0005634
GO:0006355
 LCP FUSION
CDI Cyclin-dependent kinase inhibitor PF02234 IPR003175
GO:0004861
GO:0005634
GO:0007050
 LCP KGIDDI
JmjC JmjC domain PF02373 IPR013129
LCP FUSION
JmjN jmjN domain PF02375 IPR003349
LCP FUSION
Dishevelled Dishevelled specific domain PF02377 IPR003351
GO:0004871
GO:0007275
 LCP GPE
Reticulon Reticulon PF02453 IPR003388
GO:0005783
 LCP PE
Arrestin_C Arrestin (or S-antigen), C-terminal domain PF02752 IPR011022
LCP GPE
GST_N Glutathione S-transferase, N-terminal domain PF02798 IPR004045
LCP GPE
TAF TATA box binding protein associated factor (TAF) PF02969 IPR004823
GO:0005634
GO:0006352
GO:0016986
 LCP RDFF
Nucleoplasmin Nucleoplasmin PF03066 IPR004301
GO:0003676
 LCP DPEA PE
GTP_EFTU_D3 Elongation factor Tu C-terminal domain PF03143 IPR004160
GO:0005525
 LCP GPE
Sina Seven in absentia protein family PF03145 IPR018121
GO:0005634
GO:0006511
GO:0007275
 LCP DPEA
Tektin Tektin family PF03148 IPR000435
GO:0000226
GO:0005874
 LCP DPEA PE
TFIIA Transcription factor IIA, alpha/beta subunit PF03153 IPR004855
GO:0003702
GO:0005672
GO:0006367
 LCP PE
YEATS YEATS family PF03366 IPR005033
GO:0005634
GO:0006355
 LCP RDFF
TFIID_30kDa Transcription initiation factor TFIID 23-30kDa subunit PF03540 IPR003923
GO:0003702
GO:0005634
GO:0006352
 LCP PE
Mob1_phocein Mob1/phocein family PF03637 IPR005301
GO:0005515
 LCP DOMAINGA
MSSP Male specific sperm protein PF03940 IPR005634
LCP DPEA PE
Ribosomal_L11_N Ribosomal protein L11, N-terminal domain PF03946 IPR020784
LCP DOMAINGA
Tubulin_C Tubulin/FtsZ family, C-terminal domain PF03953 IPR018316
GO:0003924
GO:0005525
GO:0043234
GO:0051258
 LCP GPE
Las1 Las1-like PF04031 IPR007174
LCP DPEA PE
DUF382 Domain of unknown function (DUF382) PF04037 IPR007180
GO:0005634
GO:0006397
 LCP GPE
Ssl1 Ssl1-like PF04056 IPR007198
GO:0006281
GO:0008270
GO:0045449
 LCP FUSION
Mss4 Mss4 protein PF04421 IPR007515
GO:0005085
GO:0007264
 LCP DPEA PE
SWIM SWIM zinc finger PF04434 IPR007527
GO:0008270
 LCP PE
PA26 PA26 p53-induced protein (sestrin) PF04636 IPR006730
GO:0005634
GO:0007050
 LCP PE
Calcipressin Calcipressin PF04847 IPR006931
GO:0019722
 LCP DPEA PE
IPP-2 Protein phosphatase inhibitor 2 (IPP-2) PF04979 IPR007062
GO:0004864
GO:0009966
GO:0043666
 LCP PE
RNA_pol_Rpc34 RNA polymerase Rpc34 subunit PF05158 IPR007832
GO:0003677
GO:0003899
GO:0005634
GO:0006350
 LCP PE
zf-DNL DNL zinc finger PF05180 IPR007853
LCP DPEA PE
Dpy-30 Dpy-30 motif PF05186 IPR007858
LCP DPEA
SH3BP5 SH3 domain-binding protein 5 (SH3BP5) PF05276 IPR007940
LCP PE
HOOK HOOK protein PF05622
GO:0000226
GO:0005737
GO:0008017
 LCP PE
SAP18 Sin3 associated polypeptide p18 (SAP18) PF06487 IPR010516
LCP PE
NOA36 NOA36 protein PF06524 IPR010531
GO:0005634
GO:0008270
 LCP PE
DUF1253 Protein of unknown function (DUF1253) PF06862 IPR010678
GO:0005634
 LCP PE
Pericardin_rpt Pericardin like repeat PF07054 IPR009765
LCP PE
NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PF07479 IPR006109
GO:0005975
GO:0016614
GO:0055114
 LCP DOMAINGA
Shugoshin_C Shugoshin C terminus PF07557 IPR011515
GO:0000775
GO:0005634
GO:0045132
 LCP GPE
Shugoshin_N N-terminal coiled-coil region of kinetochore-attachment protein PF07558 IPR011516
GO:0000775
GO:0005634
GO:0045132
 LCP GPE
TPR_2 Tetratricopeptide repeat PF07719 IPR013105
LCP INSITE
TFIIB_Zn_Ribbon TFIIB zinc-binding PF08271 IPR013137
GO:0008270
GO:0045449
 LCP PVALUE
PPP5 PPP5 PF08321 IPR013235
GO:0004722
GO:0046872
 LCP PVALUE



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