PHD

• Pfam ID: PHD
• Description: PHD-finger
• Accession: PF00628
• Interpro ID: IPR019787

PHD forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	PF00076	IPR000504	GO:0003676
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	PF00097	IPR018957
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	PF00130	IPR002219	GO:0023034
PHD	PHD-finger	PF00628	IPR019787
JmjC	JmjC domain	PF02373	IPR013129
zf-RING-like	RING-like domain	PF08746	IPR014857
Histone	Core histone H2A/H2B/H3/H4	PF00125	IPR007125	GO:0003677
Myb_DNA-binding	Myb-like DNA-binding domain	PF00249	IPR014778
Helicase_C	Helicase conserved C-terminal domain	PF00271	IPR001650	GO:0003676 GO:0004386 GO:0005524
WD40	WD domain, G-beta repeat	PF00400	IPR019781
Bromodomain	Bromodomain	PF00439	IPR001487
TUDOR	Tudor domain	PF00567	IPR008191
Hist_deacetyl	Histone deacetylase domain	PF00850	IPR000286
SET	SET domain	PF00856	IPR001214
MOZ_SAS	MOZ/SAS family	PF01853	IPR002717	GO:0005634 GO:0016747 GO:0045449
HLH	Helix-loop-helix DNA-binding domain	PF00010	IPR001092	GO:0030528 GO:0045449
Actin	Actin	PF00022	IPR004000	GO:0005515
Asp	Eukaryotic aspartyl protease	PF00026	IPR001461	GO:0004190 GO:0006508
Homeobox	Homeobox domain	PF00046	IPR001356	GO:0003700 GO:0006355 GO:0043565
Sugar_tr	Sugar (and other) transporter	PF00083	IPR005828	GO:0005215 GO:0006810 GO:0016021 GO:0055085
zf-C2H2	Zinc finger, C2H2 type	PF00096	IPR007087	GO:0005622 GO:0008270
Zn_clus	Fungal Zn(2)-Cys(6) binuclear cluster domain	PF00172	IPR001138	GO:0003700 GO:0005634 GO:0006355 GO:0008270
SNF2_N	SNF2 family N-terminal domain	PF00176	IPR000330	GO:0003677 GO:0005524
Chromo	'chromo' (CHRromatin Organisation MOdifier) domain	PF00385	IPR000953	GO:0000785 GO:0003682 GO:0005634 GO:0006333
LIM	LIM domain	PF00412	IPR001781	GO:0008270
HMG_box	HMG (high mobility group) box	PF00505	IPR000910	GO:0003677 GO:0005634
TPR_1	Tetratricopeptide repeat	PF00515	IPR001440
Acetyltransf_1	Acetyltransferase (GNAT) family	PF00583	IPR022610
zf-B_box	B-box zinc finger	PF00643	IPR000315	GO:0005622 GO:0008270
PUF	Pumilio-family RNA binding repeat	PF00806	IPR001313	GO:0003723
PWWP	PWWP domain	PF00855	IPR000313
SAND	SAND domain	PF01342	IPR000770	GO:0003677 GO:0005634
ARID	ARID/BRIGHT DNA binding domain	PF01388	IPR001606	GO:0003677 GO:0005622
BAH	BAH domain	PF01426	IPR001025	GO:0003677
MBD	Methyl-CpG binding domain	PF01429	IPR001739	GO:0003677 GO:0005634
zf-MYND	MYND finger	PF01753	IPR002893	GO:0008270
zf-CXXC	CXXC zinc finger domain	PF02008	IPR002857	GO:0003677 GO:0008270
SIR2	Sir2 family	PF02146	IPR003000	GO:0006342 GO:0006476 GO:0008270 GO:0016811 GO:0045449 GO:0070403
AT_hook	AT hook motif	PF02178	IPR017956	GO:0003677
zf-UBR	Putative zinc finger in N-recognin (UBR box)	PF02207	IPR003126	GO:0004842 GO:0008270
JmjN	jmjN domain	PF02375	IPR003349
PhzC-PhzF	Phenazine biosynthesis-like protein	PF02567	IPR003719	GO:0003824 GO:0009058
DUF171	Uncharacterized ACR, COG2106	PF02598	IPR003750
PAH	Paired amphipathic helix repeat	PF02671	IPR003822	GO:0005634 GO:0006355
DDT	DDT domain	PF02791	IPR004022
zf-C5HC2	C5HC2 zinc finger	PF02928	IPR004198	GO:0005634
Sp100	Sp100 domain	PF03172	IPR004865	GO:0005634
Dpy-30	Dpy-30 motif	PF05186	IPR007858
Cps15	Chromatin remodelling complex component cps15	PF05205
MRG	MRG	PF05712	IPR008676	GO:0005634
TFIIS_M	Transcription factor S-II (TFIIS), central domain	PF07500	IPR003618	GO:0006350
CT20	CT20 family	PF07904	IPR012423	GO:0005634 GO:0043189 GO:0045449
Rxt3	Histone deacetylation protein Rxt3	PF08642	IPR013951
Vps51	Vps51/Vps67	PF08700	IPR014812