Pfam ID Description Accession Interpro ID GO ID
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957



zf-C3HC4 forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
PDB 3DID ME PE GPE RDFF
UQ_con Ubiquitin-conjugating enzyme PF00179 IPR000608
GO:0019787
GO:0043687
GO:0051246
 PDB IPFAM 3DID DPEA PE GPE DIPD RDFF KGIDDI INSITE
PHD PHD-finger PF00628 IPR019787
PDB 3DID FUSION
Cullin Cullin family PF00888 IPR001373
GO:0006511
GO:0031461
GO:0031625
 PDB IPFAM
IBR IBR domain PF01485 IPR002867
GO:0008270
 PDB IPFAM FUSION
Cbl_N CBL proto-oncogene N-terminal domain 1 PF02262 IPR003153
GO:0004871
GO:0005634
GO:0007166
 PDB IPFAM
Baculo_IE-1 Baculovirus immediate-early protein (IE-0) PF05290 IPR007954
PDB 3DID
MAT1 CDK-activating kinase assembly factor MAT1 PF06391 IPR015877
GO:0005634
GO:0007049
 PDB IPFAM
Ank Ankyrin repeat PF00023 IPR002110
HCP ME
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
 HCP FUSION RDFF INSITE
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270
 HCP ME FUSION PE
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
GO:0003677
 HCP DPEA PE RDFF INSITE
ubiquitin Ubiquitin family PF00240 IPR000626
HCP ME DPEA PE GPE
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
 HCP ME FUSION
WD40 WD domain, G-beta repeat PF00400 IPR019781
HCP ME FUSION INSITE
LRR_1 Leucine Rich Repeat PF00560 IPR001611
GO:0005515
 HCP ME FUSION
UBA UBA/TS-N domain PF00627 IPR000449
HCP ME FUSION
F-box F-box domain PF00646 IPR001810
HCP PVALUE PE RDFF INSITE
MATH MATH domain PF00917 IPR002083
HCP ME FUSION PE
FYVE FYVE zinc finger PF01363 IPR000306
HCP ME
VHL von Hippel-Lindau disease tumour suppressor protein PF01847
HCP ME
PA PA domain PF02225 IPR003137
HCP ME FUSION
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
 MCP PE RDFF
ADH_zinc_N Zinc-binding dehydrogenase PF00107 IPR013149
GO:0008270
GO:0016491
GO:0055114
 MCP RDFF INSITE
FHA FHA domain PF00498 IPR000253
MCP FUSION DIPD
TPR_1 Tetratricopeptide repeat PF00515 IPR001440
MCP FUSION DOMAINGA
BRCT BRCA1 C Terminus (BRCT) domain PF00533 IPR001357
GO:0005622
 MCP FUSION DIPD
zf-RanBP Zn-finger in Ran binding protein and others PF00641 IPR001876
GO:0005622
GO:0008270
 MCP FUSION PE
BIR Inhibitor of Apoptosis domain PF00653 IPR001370
GO:0005622
 MCP FUSION PE
MAM33 Mitochondrial glycoprotein PF02330 IPR003428
GO:0005759
 MCP DPEA PE RDFF
SWIM SWIM zinc finger PF04434 IPR007527
GO:0008270
 MCP DPEA PE GPE
GTP_EFTU Elongation factor Tu GTP binding domain PF00009 IPR000795
GO:0003924
GO:0005525
 LCP RDFF
HLH Helix-loop-helix DNA-binding domain PF00010 IPR001092
GO:0030528
GO:0045449
 LCP KGIDDI
Actin Actin PF00022 IPR004000
GO:0005515
 LCP RDFF
Arf ADP-ribosylation factor family PF00025 IPR006689
GO:0005525
 LCP FUSION
fn3 Fibronectin type III domain PF00041 IPR003961
LCP FUSION
Myosin_head Myosin head (motor domain) PF00063 IPR001609
GO:0003774
GO:0005524
GO:0016459
 LCP GPE
Ras Ras family PF00071 IPR013753
LCP RDFF
SNF2_N SNF2 family N-terminal domain PF00176 IPR000330
GO:0003677
GO:0005524
 LCP FUSION
Iso_dh Isocitrate/isopropylmalate dehydrogenase PF00180 IPR001804
GO:0000287
GO:0016616
GO:0051287
GO:0055114
 LCP PE
HSP90 Hsp90 protein PF00183 IPR020576
LCP INSITE
Fork_head Fork head domain PF00250 IPR001766
GO:0003700
GO:0005634
GO:0006355
GO:0043565
 LCP PE
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase PF00254 IPR001179
GO:0006457
 LCP PE
Arrestin_N Arrestin (or S-antigen), N-terminal domain PF00339 IPR011021
LCP PE
HMG-CoA_red Hydroxymethylglutaryl-coenzyme A reductase PF00368 IPR002202
GO:0004420
GO:0015936
GO:0050662
GO:0055114
 LCP RDFF
Ribosomal_S9 Ribosomal protein S9/S16 PF00380 IPR000754
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
TFIIB Transcription factor TFIIB repeat PF00382 IPR013150
GO:0003743
GO:0005515
GO:0006413
 LCP PVALUE
Chromo 'chromo' (CHRromatin Organisation MOdifier) domain PF00385 IPR000953
GO:0000785
GO:0003682
GO:0005634
GO:0006333
 LCP PE
2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF00389 IPR006139
GO:0008152
GO:0016616
GO:0051287
 LCP GPE
Bromodomain Bromodomain PF00439 IPR001487
LCP FUSION
SHMT Serine hydroxymethyltransferase PF00464 IPR001085
GO:0004372
GO:0006544
GO:0006563
 LCP INSITE
IMPDH IMP dehydrogenase / GMP reductase domain PF00478 IPR001093
GO:0003824
GO:0055114
 LCP RDFF
HMG_box HMG (high mobility group) box PF00505 IPR000910
GO:0003677
GO:0005634
 LCP INSITE
Arm Armadillo/beta-catenin-like repeat PF00514 IPR000225
LCP RDFF
Ion_trans Ion transport protein PF00520 IPR005821
GO:0005216
GO:0006811
GO:0016020
GO:0055085
 LCP PE
Peptidase_M24 metallopeptidase family M24 PF00557 IPR000994
GO:0009987
 LCP INSITE
TBC TBC domain PF00566 IPR000195
GO:0005097
GO:0005622
GO:0032313
 LCP RDFF
CBS CBS domain pair PF00571 IPR000644
LCP RDFF
S1 S1 RNA binding domain PF00575 IPR003029
GO:0003723
 LCP INSITE
AhpC-TSA AhpC/TSA family PF00578 IPR000866
GO:0016209
GO:0016491
 LCP RDFF
Acetyltransf_1 Acetyltransferase (GNAT) family PF00583 IPR022610
LCP FUSION
tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T) PF00587 IPR002314
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
 LCP RDFF
PDZ PDZ domain (Also known as DHR or GLGF) PF00595 IPR001478
GO:0005515
 LCP FUSION
CARD Caspase recruitment domain PF00619 IPR001315
GO:0005515
GO:0005622
GO:0042981
 LCP FUSION
SPRY SPRY domain PF00622 IPR003877
LCP FUSION
Filamin Filamin/ABP280 repeat PF00630 IPR017868
LCP FUSION
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) PF00642 IPR000571
GO:0003676
GO:0008270
 LCP FUSION
zf-B_box B-box zinc finger PF00643 IPR000315
GO:0005622
GO:0008270
 LCP FUSION
Peptidase_C2 Calpain family cysteine protease PF00648 IPR001300
GO:0004198
GO:0005622
GO:0006508
 LCP GPE
EFG_C Elongation factor G C-terminus PF00679 IPR000640
GO:0005525
 LCP GPE
Cation_ATPase_N Cation transporter/ATPase, N-terminus PF00690 IPR004014
GO:0006754
GO:0006812
GO:0015662
GO:0016020
 LCP GPE
AA_kinase Amino acid kinase family PF00696 IPR001048
GO:0008652
 LCP INSITE
AIRC AIR carboxylase PF00731 IPR000031
GO:0004638
GO:0006189
 LCP PVALUE
XPG_N XPG N-terminal domain PF00752 IPR006085
GO:0004518
GO:0006281
 LCP GPE
Furin-like Furin-like cysteine rich region PF00757 IPR006211
GO:0004714
GO:0005524
GO:0006468
GO:0007169
GO:0016020
 LCP GPE
Ribosomal_L15e Ribosomal L15 PF00827 IPR000439
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
Ribosomal_S17e Ribosomal S17 PF00833 IPR001210
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
SET SET domain PF00856 IPR001214
LCP KGIDDI
Innexin Innexin PF00876 IPR000990
GO:0005921
 LCP PE
Ribosomal_L44 Ribosomal protein L44 PF00935 IPR000552
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
Recep_L_domain Receptor L domain PF01030 IPR000494
GO:0016020
 LCP GPE
TFIIS_C Transcription factor S-II (TFIIS) PF01096 IPR001222
GO:0003676
GO:0008270
GO:0030528
GO:0045449
 LCP RDFF
CKS Cyclin-dependent kinase regulatory subunit PF01111 IPR000789
GO:0007049
GO:0016538
 LCP PE
RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain PF01193 IPR011261
GO:0003899
GO:0006350
GO:0046983
 LCP INSITE
F-actin_cap_A F-actin capping protein alpha subunit PF01267 IPR018315
LCP INSITE
Ribosomal_S26e Ribosomal protein S26e PF01283 IPR000892
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
Mov34 Mov34/MPN/PAD-1 family PF01398 IPR000555
LCP PE
zf-NF-X1 NF-X1 type zinc finger PF01422 IPR000967
GO:0003700
GO:0005634
GO:0006355
GO:0008270
 LCP FUSION
LSM LSM domain PF01423 IPR001163
LCP RDFF
R3H R3H domain PF01424 IPR001374
GO:0003676
 LCP FUSION
NHL NHL repeat PF01436 IPR001258
LCP FUSION
PUA PUA domain PF01472 IPR002478
GO:0003723
 LCP INSITE
Acyltransferase Acyltransferase PF01553 IPR002123
GO:0008152
GO:0008415
 LCP RDFF
G-patch G-patch domain PF01585 IPR000467
GO:0003676
GO:0005622
 LCP PE
MutS_I MutS domain I PF01624 IPR007695
GO:0005524
GO:0006298
GO:0030983
 LCP RDFF
IBB Importin beta binding domain PF01749 IPR002652
GO:0005634
GO:0005643
GO:0005737
GO:0006606
GO:0006886
GO:0008565
 LCP RDFF
Ribosomal_L18ae Ribosomal L18ae protein family PF01775 IPR021138
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DPEA PE
Ribosomal_L38e Ribosomal L38e protein family PF01781 IPR002675
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP INSITE
Methyltransf_5 MraW methylase family PF01795 IPR002903
GO:0008168
 LCP DPEA PE
PC_rep Proteasome/cyclosome repeat PF01851 IPR002015
LCP PE
SAP SAP domain PF02037 IPR003034
GO:0003676
 LCP FUSION
zf-UBP Zn-finger in ubiquitin-hydrolases and other protein PF02148 IPR001607
GO:0008270
 LCP FUSION
RNA_POL_M_15KD RNA polymerases M/15 Kd subunit PF02150 IPR001529
GO:0003677
GO:0003899
GO:0006350
 LCP RDFF
GBP Guanylate-binding protein, N-terminal domain PF02263 IPR015894
GO:0003924
GO:0005525
 LCP FUSION
TFIIF_beta Transcription initiation factor IIF, beta subunit PF02270 IPR003196
GO:0003702
GO:0005524
GO:0005674
GO:0006367
 LCP INSITE
SMC_N RecF/RecN/SMC N terminal domain PF02463 IPR003395
GO:0005524
GO:0005694
 LCP RDFF
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 IPR003594
GO:0005524
 LCP INSITE
DUF171 Uncharacterized ACR, COG2106 PF02598 IPR003750
LCP INSITE
Arrestin_C Arrestin (or S-antigen), C-terminal domain PF02752 IPR011022
LCP GPE
TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF02775 IPR011766
GO:0003824
GO:0030976
 LCP RDFF
WWE WWE domain PF02825 IPR004170
LCP FUSION
2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826 IPR006140
GO:0016616
GO:0048037
 LCP RDFF
CUE CUE domain PF02845 IPR003892
LCP FUSION
MIF4G MIF4G domain PF02854 IPR003890
GO:0005515
GO:0016070
 LCP RDFF
BAR BAR domain PF03114 IPR004148
GO:0005515
GO:0005737
 LCP INSITE
GTP_EFTU_D3 Elongation factor Tu C-terminal domain PF03143 IPR004160
GO:0005525
 LCP GPE
GTP_EFTU_D2 Elongation factor Tu domain 2 PF03144 IPR004161
GO:0005525
 LCP GPE
Tctex-1 Tctex-1 family PF03645 IPR005334
LCP DPEA PE
Scramblase Scramblase PF03803 IPR005552
LCP PE
IBN_N Importin-beta N-terminal domain PF03810 IPR001494
GO:0006886
GO:0008565
 LCP PE
RNA_pol_Rpb7_N RNA polymerase Rpb7-like, N-terminal domain PF03876 IPR005576
GO:0003899
GO:0006350
 LCP INSITE
Skp1_POZ Skp1 family, tetramerisation domain PF03931 IPR016073
GO:0006511
 LCP PE
Vps52 Vps52 / Sac2 family PF04129 IPR007258
LCP DPEA PE
U-box U-box domain PF04564 IPR003613
GO:0000151
GO:0004842
GO:0016567
 LCP FUSION
RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 PF04567 IPR007647
GO:0003677
GO:0003899
GO:0006350
 LCP GPE
SPC22 Signal peptidase subunit PF04573 IPR007653
GO:0005787
GO:0006465
GO:0008233
GO:0016021
 LCP DPEA PE
P16-Arc ARP2/3 complex 16 kDa subunit (p16-Arc) PF04699 IPR006789
GO:0005856
GO:0030833
 LCP INSITE
Pex2_Pex12 Pex2 / Pex12 amino terminal region PF04757 IPR006845
GO:0005778
GO:0007031
 LCP FUSION
PRMT5 PRMT5 arginine-N-methyltransferase PF05185 IPR007857
GO:0005737
GO:0008168
 LCP FUSION
AMP_N Aminopeptidase P, N-terminal domain PF05195 IPR007865
GO:0004177
GO:0030145
 LCP INSITE
CHL4 Kinetochore protein CHL4 like PF05238 IPR007902
LCP INSITE
zf-CHY CHY zinc finger PF05495 IPR008913
GO:0008270
 LCP FUSION
RWD RWD domain PF05773 IPR006575
LCP FUSION
SMC_hinge SMC proteins Flexible Hinge Domain PF06470 IPR010935
GO:0005515
GO:0005524
GO:0005694
GO:0051276
 LCP GPE
Neuralized Neuralized PF07177 IPR006573
LCP FUSION
BRAP2 BRCA1-associated protein 2 PF07576 IPR011422
LCP GPE
KH_2 KH domain PF07650 IPR004044
GO:0003723
 LCP PE
ADH_N Alcohol dehydrogenase GroES-like domain PF08240 IPR013154
GO:0016491
 LCP INSITE
DUF1762 Protein of unknown function (DUF1762) PF08574 IPR013883
LCP INSITE



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