S1

• Pfam ID: S1
• Description: S1 RNA binding domain
• Accession: PF00575
• Interpro ID: IPR003029
• GO ID:

  GO:0003723

S1 forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
KH_1	KH domain	PF00013	IPR018111	GO:0003723
Pkinase	Protein kinase domain	PF00069	IPR017442	GO:0004672 GO:0005524 GO:0006468
S1	S1 RNA binding domain	PF00575	IPR003029	GO:0003723
RNB	RNB domain	PF00773	IPR001900	GO:0003723 GO:0004540
RNase_PH	3' exoribonuclease family, domain 1	PF01138	IPR001247	GO:0000175 GO:0003723 GO:0006396
RNA_pol_Rpb4	RNA polymerase Rpb4	PF03874	IPR005574	GO:0003899 GO:0006350
RNA_pol_Rpb7_N	RNA polymerase Rpb7-like, N-terminal domain	PF03876	IPR005576	GO:0003899 GO:0006350
EIF_2_alpha	Eukaryotic translation initiation factor 2 alpha subunit	PF07541	IPR011488	GO:0003723 GO:0003743 GO:0005850 GO:0006412
RNase_E_G	Ribonuclease E/G family	PF10150	IPR019307
RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain	PF01193	IPR011261	GO:0003899 GO:0006350 GO:0046983
RNase_PH_C	3' exoribonuclease family, domain 2	PF03725	IPR015847	GO:0000175 GO:0003723 GO:0006396
PNPase	Polyribonucleotide nucleotidyltransferase, RNA binding domain	PF03726	IPR015848	GO:0000175 GO:0003723 GO:0006396
GTP_EFTU	Elongation factor Tu GTP binding domain	PF00009	IPR000795	GO:0003924 GO:0005525
DEAD	DEAD/DEAH box helicase	PF00270	IPR011545	GO:0003676 GO:0005524 GO:0008026
Helicase_C	Helicase conserved C-terminal domain	PF00271	IPR001650	GO:0003676 GO:0004386 GO:0005524
WD40	WD domain, G-beta repeat	PF00400	IPR019781
RNA_pol_Rpb2_6	RNA polymerase Rpb2, domain 6	PF00562	IPR007120	GO:0003677 GO:0003899 GO:0006350
IF-2B	Initiation factor 2 subunit family	PF01008	IPR000649	GO:0044237
Spt4	Transcription elongation protein Spt4	PF06093
SH2	SH2 domain	PF00017	IPR000980	GO:0005515
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	PF00097	IPR018957
zf-CCHC	Zinc knuckle	PF00098	IPR001878	GO:0003676 GO:0008270
Enolase_C	Enolase, C-terminal TIM barrel domain	PF00113	IPR020810	GO:0000015 GO:0000287 GO:0004634 GO:0006096
Hexapep	Bacterial transferase hexapeptide (three repeats)	PF00132	IPR001451
Metallophos	Calcineurin-like phosphoesterase	PF00149	IPR004843	GO:0016787
ATP-synt	ATP synthase	PF00231	IPR000131	GO:0015986 GO:0045261 GO:0046933 GO:0046961
PALP	Pyridoxal-phosphate dependent enzyme	PF00291	IPR001926	GO:0003824 GO:0008152 GO:0030170
KOW	KOW motif	PF00467	IPR005824
RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	PF00623	IPR000722	GO:0003677 GO:0003899 GO:0006350
ThiF	ThiF family	PF00899	IPR000594	GO:0003824
A_deaminase	Adenosine/AMP deaminase	PF00962	IPR001365	GO:0009168 GO:0019239
TFIIS_C	Transcription factor S-II (TFIIS)	PF01096	IPR001222	GO:0003676 GO:0008270 GO:0030528 GO:0045449
Bac_export_2	FlhB HrpN YscU SpaS Family	PF01312	IPR006135	GO:0009306 GO:0016020
IF4E	Eukaryotic initiation factor 4E	PF01652	IPR001040	GO:0003723 GO:0003743 GO:0005737 GO:0006413
RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit	PF02150	IPR001529	GO:0003677 GO:0003899 GO:0006350
MIF4G	MIF4G domain	PF02854	IPR003890	GO:0005515 GO:0016070
RNA_pol_Rpb8	RNA polymerase Rpb8	PF03870	IPR005570	GO:0006350
Enolase_N	Enolase, N-terminal domain	PF03952	IPR020811	GO:0000015 GO:0000287 GO:0004634 GO:0006096
RpoE2	Archaeal DNA-directed RNA polymerase subunit E'' (RpoE'' or RpoE2)	PF04035
HA2	Helicase associated domain (HA2)	PF04408	IPR007502	GO:0004386
RNA_pol_Rpb2_7	RNA polymerase Rpb2, domain 7	PF04560	IPR007641	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb2_2	RNA polymerase Rpb2, domain 2	PF04561	IPR007642	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb2_1	RNA polymerase beta subunit	PF04563	IPR007644	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb2_3	RNA polymerase Rpb2, domain 3	PF04565	IPR007645	GO:0003677 GO:0003899 GO:0006350
IATP	Mitochondrial ATPase inhibitor, IATP	PF04568	IPR007648	GO:0004857 GO:0005739 GO:0045980
RNA_pol_Rpb1_3	RNA polymerase Rpb1, domain 3	PF04983	IPR007066	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_1	RNA polymerase Rpb1, domain 1	PF04997	IPR007080	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_5	RNA polymerase Rpb1, domain 5	PF04998	IPR007081	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_4	RNA polymerase Rpb1, domain 4	PF05000	IPR007083	GO:0003677 GO:0003899 GO:0006350
DUF1762	Protein of unknown function (DUF1762)	PF08574	IPR013883