Pfam ID Description Accession Interpro ID GO ID
RNA_pol_Rpb7_N RNA polymerase Rpb7-like, N-terminal domain PF03876 IPR005576
GO:0003899
GO:0006350



RNA_pol_Rpb7_N forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
S1 S1 RNA binding domain PF00575 IPR003029
GO:0003723
PDB IPFAM 3DID FUSION
RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 PF00623 IPR000722
GO:0003677
GO:0003899
GO:0006350
PDB IPFAM DIPD
RNA_pol_Rpb6 RNA polymerase Rpb6 PF01192 IPR006110
GO:0003677
GO:0003899
GO:0006351
PDB IPFAM 3DID
RNA_pol_Rpb4 RNA polymerase Rpb4 PF03874 IPR005574
GO:0003899
GO:0006350
PDB IPFAM 3DID
RNA_pol_Rpb7_N RNA polymerase Rpb7-like, N-terminal domain PF03876 IPR005576
GO:0003899
GO:0006350
PDB 3DID
RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 PF04560 IPR007641
GO:0003677
GO:0003899
GO:0006350
PDB IPFAM
RNA_pol_Rbc25 RNA polymerase III subunit Rpc25 PF08292 IPR013238
PDB 3DID
RNA_pol_Rpb5_C RNA polymerase Rpb5, C-terminal domain PF01191 IPR000783
GO:0003677
GO:0003899
GO:0006350
HCP GPE DIPD
RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain PF01193 IPR011261
GO:0003899
GO:0006350
GO:0046983
HCP RCDP GPE DIPD INSITE
RNA_pol_Rpb8 RNA polymerase Rpb8 PF03870 IPR005570
GO:0006350
HCP RCDP PE GPE DIPD INSITE
RNA_pol_Rpb5_N RNA polymerase Rpb5, N-terminal domain PF03871 IPR005571
GO:0003677
GO:0003899
GO:0005634
GO:0006350
HCP RCDP GPE DIPD
RNA_pol_Rpb2_1 RNA polymerase beta subunit PF04563 IPR007644
GO:0003677
GO:0003899
GO:0006350
HCP RCDP DIPD
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain PF01000 IPR011262
GO:0003899
GO:0006350
GO:0046983
MCP DIPD
RNA_pol_N RNA polymerases N / 8 kDa subunit PF01194 IPR000268
GO:0003677
GO:0003899
GO:0006351
MCP DIPD INSITE
RNA_POL_M_15KD RNA polymerases M/15 Kd subunit PF02150 IPR001529
GO:0003677
GO:0003899
GO:0006350
MCP DIPD
RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 PF04566 IPR007646
GO:0003677
GO:0003899
GO:0006350
MCP DIPD
RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 PF04983 IPR007066
GO:0003677
GO:0003899
GO:0006350
MCP RCDP
RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 PF04997 IPR007080
GO:0003677
GO:0003899
GO:0006350
MCP DIPD
RNA_pol_Rpc34 RNA polymerase Rpc34 subunit PF05158 IPR007832
GO:0003677
GO:0003899
GO:0005634
GO:0006350
MCP INSITE
Spt4 Transcription elongation protein Spt4 PF06093
MCP RCDP DIPD INSITE
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
LCP INSITE
RpoE2 Archaeal DNA-directed RNA polymerase subunit E'' (RpoE'' or RpoE2) PF04035
LCP FUSION
RNA_pol_Rpc4 RNA polymerase III RPC4 PF05132 IPR007811
GO:0003677
GO:0003899
GO:0005666
GO:0006383
LCP DIPD
DUF1762 Protein of unknown function (DUF1762) PF08574 IPR013883
LCP INSITE




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