Pfam ID
Description
Accession
Interpro ID
GO ID
RNA_pol_Rpb7_N
RNA polymerase Rpb7-like, N-terminal domain
PF03876
IPR005576
GO:0003899
GO:0006350
RNA_pol_Rpb7_N
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
S1
S1 RNA binding domain
PF00575
IPR003029
GO:0003723
RNA_pol_Rpb1_2
RNA polymerase Rpb1, domain 2
PF00623
IPR000722
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rpb6
RNA polymerase Rpb6
PF01192
IPR006110
GO:0003677
GO:0003899
GO:0006351
RNA_pol_Rpb4
RNA polymerase Rpb4
PF03874
IPR005574
GO:0003899
GO:0006350
RNA_pol_Rpb7_N
RNA polymerase Rpb7-like, N-terminal domain
PF03876
IPR005576
GO:0003899
GO:0006350
RNA_pol_Rpb2_7
RNA polymerase Rpb2, domain 7
PF04560
IPR007641
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rbc25
RNA polymerase III subunit Rpc25
PF08292
IPR013238
RNA_pol_Rpb5_C
RNA polymerase Rpb5, C-terminal domain
PF01191
IPR000783
GO:0003677
GO:0003899
GO:0006350
RNA_pol_L
RNA polymerase Rpb3/Rpb11 dimerisation domain
PF01193
IPR011261
GO:0003899
GO:0006350
GO:0046983
RNA_pol_Rpb8
RNA polymerase Rpb8
PF03870
IPR005570
GO:0006350
RNA_pol_Rpb5_N
RNA polymerase Rpb5, N-terminal domain
PF03871
IPR005571
GO:0003677
GO:0003899
GO:0005634
GO:0006350
RNA_pol_Rpb2_1
RNA polymerase beta subunit
PF04563
IPR007644
GO:0003677
GO:0003899
GO:0006350
RNA_pol_A_bac
RNA polymerase Rpb3/RpoA insert domain
PF01000
IPR011262
GO:0003899
GO:0006350
GO:0046983
RNA_pol_N
RNA polymerases N / 8 kDa subunit
PF01194
IPR000268
GO:0003677
GO:0003899
GO:0006351
RNA_POL_M_15KD
RNA polymerases M/15 Kd subunit
PF02150
IPR001529
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rpb2_4
RNA polymerase Rpb2, domain 4
PF04566
IPR007646
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rpb1_3
RNA polymerase Rpb1, domain 3
PF04983
IPR007066
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rpb1_1
RNA polymerase Rpb1, domain 1
PF04997
IPR007080
GO:0003677
GO:0003899
GO:0006350
RNA_pol_Rpc34
RNA polymerase Rpc34 subunit
PF05158
IPR007832
GO:0003677
GO:0003899
GO:0005634
GO:0006350
Spt4
Transcription elongation protein Spt4
PF06093
zf-C3HC4
Zinc finger, C3HC4 type (RING finger)
PF00097
IPR018957
RpoE2
Archaeal DNA-directed RNA polymerase subunit E'' (RpoE'' or RpoE2)
PF04035
RNA_pol_Rpc4
RNA polymerase III RPC4
PF05132
IPR007811
GO:0003677
GO:0003899
GO:0005666
GO:0006383
DUF1762
Protein of unknown function (DUF1762)
PF08574
IPR013883
Terms of use
Copyright © 2007, Raghavachari et al.
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