Pfam ID |
Description |
Accession |
Interpro ID |
GO ID |
Notes |
Source |
KH_1 |
KH domain |
PF00013 |
IPR018111 |
|
 |
|
S1 |
S1 RNA binding domain |
PF00575 |
IPR003029 |
|
 |
|
RNase_PH |
3' exoribonuclease family, domain 1 |
PF01138 |
IPR001247 |
|
 |
|
SH2 |
SH2 domain |
PF00017 |
IPR000980 |
|
 |
|
RRM_1 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
PF00076 |
IPR000504 |
|
 |
|
Ribosomal_S3_C |
Ribosomal protein S3, C-terminal domain |
PF00189 |
IPR001351 |
|
 |
|
DEAD |
DEAD/DEAH box helicase |
PF00270 |
IPR011545 |
|
 |
|
Ribosomal_S3_N |
Ribosomal protein S3, N-terminal domain |
PF00417 |
IPR008282 |
|
 |
|
RNase_PH_C |
3' exoribonuclease family, domain 2 |
PF03725 |
IPR015847 |
|
 |
|
PNPase |
Polyribonucleotide nucleotidyltransferase, RNA binding domain |
PF03726 |
IPR015848 |
|
 |
|
Ras |
Ras family |
PF00071 |
IPR013753 |
|
 |
|
WD40 |
WD domain, G-beta repeat |
PF00400 |
IPR019781 |
|
 |
|
G-alpha |
G-protein alpha subunit |
PF00503 |
IPR001019 |
|
 |
|
TPR_1 |
Tetratricopeptide repeat |
PF00515 |
IPR001440 |
|
 |
|
DUF171 |
Uncharacterized ACR, COG2106 |
PF02598 |
IPR003750 |
|
 |
|
MIF4G |
MIF4G domain |
PF02854 |
IPR003890 |
|
 |
|
Kunitz_BPTI |
Kunitz/Bovine pancreatic trypsin inhibitor domain |
PF00014 |
IPR002223 |
|
 |
|
Ank |
Ankyrin repeat |
PF00023 |
IPR002110 |
|
 |
|
Homeobox |
Homeobox domain |
PF00046 |
IPR001356 |
|
 |
|
Pkinase |
Protein kinase domain |
PF00069 |
IPR017442 |
|
 |
|
zf-C2H2 |
Zinc finger, C2H2 type |
PF00096 |
IPR007087 |
|
 |
|
Y_phosphatase |
Protein-tyrosine phosphatase |
PF00102 |
IPR000242 |
|
 |
|
Histone |
Core histone H2A/H2B/H3/H4 |
PF00125 |
IPR007125 |
|
 |
|
TUDOR |
Tudor domain |
PF00567 |
IPR008191 |
|
 |
|
PDZ |
PDZ domain (Also known as DHR or GLGF) |
PF00595 |
IPR001478 |
|
 |
|
zf-RanBP |
Zn-finger in Ran binding protein and others |
PF00641 |
IPR001876 |
|
 |
|
zf-CCCH |
Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
PF00642 |
IPR000571 |
|
 |
|
Lactamase_B |
Metallo-beta-lactamase superfamily |
PF00753 |
|
|
 |
|
Clat_adaptor_s |
Clathrin adaptor complex small chain |
PF01217 |
|
|
 |
|
Ribosomal_S21e |
Ribosomal protein S21e |
PF01249 |
IPR001931 |
|
 |
|
Adaptin_N |
Adaptin N terminal region |
PF01602 |
IPR002553 |
|
 |
|
IF4E |
Eukaryotic initiation factor 4E |
PF01652 |
IPR001040 |
|
 |
|
FG-GAP |
FG-GAP repeat |
PF01839 |
IPR013517 |
|
 |
|
eIF-5_eIF-2B |
Domain found in IF2B/IF5 |
PF01873 |
IPR002735 |
|
 |
|
SRP19 |
SRP19 protein |
PF01922 |
IPR002778 |
|
 |
|
MMR_HSR1 |
GTPase of unknown function |
PF01926 |
IPR002917 |
|
 |
|
HD |
HD domain |
PF01966 |
IPR006674 |
|
 |
|
HAT |
HAT (Half-A-TPR) repeat |
PF02184 |
IPR003107 |
|
 |
|
Acyl-CoA_dh_M |
Acyl-CoA dehydrogenase, middle domain |
PF02770 |
IPR006091 |
|
 |
|
Acyl-CoA_dh_N |
Acyl-CoA dehydrogenase, N-terminal domain |
PF02771 |
IPR006092 |
|
 |
|
THF_DHG_CYH_C |
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
PF02882 |
IPR020631 |
|
 |
|
Nrap |
Nrap protein |
PF03813 |
IPR005554 |
|
 |
|
LTV |
Low temperature viability protein |
PF04180 |
IPR007307 |
|
 |
|
NOG1 |
Nucleolar GTP-binding protein 1 (NOG1) |
PF06858 |
IPR010674 |
|
 |
|
RMMBL |
RNA-metabolising metallo-beta-lactamase |
PF07521 |
IPR011108 |
|
 |
|
Ribosomal_MRP8 |
Mitochondrial Ribosomal protein MRP8 |
PF07957 |
IPR012917 |
|
 |
|
Integrin_alpha2 |
Integrin alpha |
PF08441 |
IPR013649 |
|
 |
|
PalI |
pH-response regulator, PalI / Rim9 |
PF08739 |
|
|
 |
|