DEAD

• Pfam ID: DEAD
• Description: DEAD/DEAH box helicase
• Accession: PF00270
• Interpro ID: IPR011545
• GO ID:

  GO:0003676

  GO:0005524

  GO:0008026

DEAD forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
DEAD	DEAD/DEAH box helicase	PF00270	IPR011545	GO:0003676 GO:0005524 GO:0008026
Helicase_C	Helicase conserved C-terminal domain	PF00271	IPR001650	GO:0003676 GO:0004386 GO:0005524
Toprim	Toprim domain	PF01751	IPR006171
Mago_nashi	Mago nashi protein	PF02792	IPR004023	GO:0005634
MA3	MA3 domain	PF02847	IPR003891
HA2	Helicase associated domain (HA2)	PF04408	IPR007502	GO:0004386
DSHCT	DSHCT (NUC185) domain	PF08148	IPR012961	GO:0005524 GO:0016818
RQC	RQC domain	PF09382	IPR018982	GO:0006260 GO:0006281 GO:0043140
Btz	CASC3/Barentsz eIF4AIII binding	PF09405	IPR018545
KH_1	KH domain	PF00013	IPR018111	GO:0003723
Pkinase	Protein kinase domain	PF00069	IPR017442	GO:0004672 GO:0005524 GO:0006468
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	PF00076	IPR000504	GO:0003676
zf-CCHC	Zinc knuckle	PF00098	IPR001878	GO:0003676 GO:0008270
2-Hacid_dh	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	PF00389	IPR006139	GO:0008152 GO:0016616 GO:0051287
WD40	WD domain, G-beta repeat	PF00400	IPR019781
RdRP_1	RNA dependent RNA polymerase	PF00680	IPR001205	GO:0003723 GO:0003968 GO:0006350
Peptidase_C4	Peptidase family C4	PF00863	IPR001730	GO:0006508 GO:0008234
Fibrillarin	Fibrillarin	PF01269	IPR000692	GO:0003723 GO:0006364 GO:0008033 GO:0008168
tRNA_anti	OB-fold nucleic acid binding domain	PF01336	IPR004365	GO:0003676
LSM	LSM domain	PF01423	IPR001163
Ribosomal_L3	Ribosomal protein L3	PF00297	IPR000597	GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFK	Phosphofructokinase	PF00365	IPR000023	GO:0003872 GO:0005945 GO:0006096
S1	S1 RNA binding domain	PF00575	IPR003029	GO:0003723
PUF	Pumilio-family RNA binding repeat	PF00806	IPR001313	GO:0003723
Glyco_transf_20	Glycosyltransferase family 20	PF00982	IPR001830	GO:0003824 GO:0005992
RNase_PH	3' exoribonuclease family, domain 1	PF01138	IPR001247	GO:0000175 GO:0003723 GO:0006396
Adaptin_N	Adaptin N terminal region	PF01602	IPR002553	GO:0005515 GO:0006886 GO:0016192 GO:0030117
MutS_I	MutS domain I	PF01624	IPR007695	GO:0005524 GO:0006298 GO:0030983
NTP_transf_2	Nucleotidyltransferase domain	PF01909	IPR002934	GO:0016779
HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	PF02518	IPR003594	GO:0005524
TGS	TGS domain	PF02824	IPR004095
2-Hacid_dh_C	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	PF02826	IPR006140	GO:0016616 GO:0048037
Brix	Brix domain	PF04427	IPR007109
EIF_2_alpha	Eukaryotic translation initiation factor 2 alpha subunit	PF07541	IPR011488	GO:0003723 GO:0003743 GO:0005850 GO:0006412
AAA	ATPase family associated with various cellular activities (AAA)	PF00004	IPR003959	GO:0005524
ABC_tran	ABC transporter	PF00005	IPR003439	GO:0005524 GO:0016887
EGF	EGF-like domain	PF00008	IPR006209
SH3_1	SH3 domain	PF00018	IPR001452
dsrm	Double-stranded RNA binding motif	PF00035	IPR001159	GO:0003725 GO:0005622
Ras	Ras family	PF00071	IPR013753
zf-C2H2	Zinc finger, C2H2 type	PF00096	IPR007087	GO:0005622 GO:0008270
adh_short	short chain dehydrogenase	PF00106	IPR002198	GO:0008152 GO:0016491
Cyclin_N	Cyclin, N-terminal domain	PF00134	IPR006671
Metallophos	Calcineurin-like phosphoesterase	PF00149	IPR004843	GO:0016787
Mito_carr	Mitochondrial carrier protein	PF00153	IPR018108
C2	C2 domain	PF00168	IPR000008
PH	PH domain	PF00169	IPR001849
SNF2_N	SNF2 family N-terminal domain	PF00176	IPR000330	GO:0003677 GO:0005524
UQ_con	Ubiquitin-conjugating enzyme	PF00179	IPR000608	GO:0019787 GO:0043687 GO:0051246
Ribosomal_L2	Ribosomal Proteins L2, RNA binding domain	PF00181	IPR022666	GO:0003735 GO:0005622 GO:0005840 GO:0006412
Myb_DNA-binding	Myb-like DNA-binding domain	PF00249	IPR014778
CPSase_L_chain	Carbamoyl-phosphate synthase L chain, N-terminal domain	PF00289	IPR005481	GO:0003824 GO:0008152
Acid_phosphat_A	Histidine acid phosphatase	PF00328	IPR000560	GO:0003993
Ribosomal_S9	Ribosomal protein S9/S16	PF00380	IPR000754	GO:0003735 GO:0005622 GO:0005840 GO:0006412
WW	WW domain	PF00397	IPR001202	GO:0005515
PP2C	Protein phosphatase 2C	PF00481	IPR014045
MutS_V	MutS domain V	PF00488	IPR000432	GO:0005524 GO:0006298 GO:0030983
Arm	Armadillo/beta-catenin-like repeat	PF00514	IPR000225
TPR_1	Tetratricopeptide repeat	PF00515	IPR001440
BRCT	BRCA1 C Terminus (BRCT) domain	PF00533	IPR001357	GO:0005622
HRDC	HRDC domain	PF00570	IPR002121	GO:0003676 GO:0005622
SPRY	SPRY domain	PF00622	IPR003877
HECT	HECT-domain (ubiquitin-transferase)	PF00632	IPR000569	GO:0005622 GO:0006464 GO:0016881
HHH	Helix-hairpin-helix motif	PF00633	IPR000445	GO:0003677
Ribonuclease_3	RNase3 domain	PF00636	IPR000999	GO:0003723 GO:0004525 GO:0006396
F-box	F-box domain	PF00646	IPR001810
Pyrophosphatase	Inorganic pyrophosphatase	PF00719	IPR008162	GO:0000287 GO:0004427 GO:0005737 GO:0006796
HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	PF00730	IPR003265	GO:0006284
XPG_N	XPG N-terminal domain	PF00752	IPR006085	GO:0004518 GO:0006281
GTP1_OBG	GTP1/OBG	PF01018	IPR006169	GO:0005525
EMP24_GP25L	emp24/gp25L/p24 family/GOLD	PF01105	IPR000348	GO:0006810 GO:0016021
Topoisom_bac	DNA topoisomerase	PF01131	IPR013497	GO:0003677 GO:0003916 GO:0005694 GO:0006265
Nol1_Nop2_Fmu	NOL1/NOP2/sun family	PF01189	IPR001678
Ribosomal_L7Ae	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	PF01248	IPR004038
Mov34	Mov34/MPN/PAD-1 family	PF01398	IPR000555
PUA	PUA domain	PF01472	IPR002478	GO:0003723
TruB_N	TruB family pseudouridylate synthase (N terminal domain)	PF01509	IPR002501	GO:0006396
3_5_exonuc	3'-5' exonuclease	PF01612	IPR002562	GO:0003676 GO:0005622 GO:0006139 GO:0008408
IF4E	Eukaryotic initiation factor 4E	PF01652	IPR001040	GO:0003723 GO:0003743 GO:0005737 GO:0006413
ACT	ACT domain	PF01842	IPR002912	GO:0008152 GO:0016597
eIF-6	eIF-6 family	PF01912	IPR002769	GO:0042256 GO:0043022
MMR_HSR1	GTPase of unknown function	PF01926	IPR002917	GO:0005525 GO:0005622
zf-CXXC	CXXC zinc finger domain	PF02008	IPR002857	GO:0003677 GO:0008270
UVR	UvrB/uvrC motif	PF02151	IPR001943	GO:0003677 GO:0004518 GO:0006289
HAT	HAT (Half-A-TPR) repeat	PF02184	IPR003107	GO:0005622 GO:0006396
ERCC4	ERCC4 domain	PF02732	IPR006166	GO:0003677 GO:0004518 GO:0005515 GO:0006259
Transket_pyr	Transketolase, pyrimidine binding domain	PF02779	IPR005475
CPSase_L_D3	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	PF02787	IPR005480	GO:0004086 GO:0006807
MIF4G	MIF4G domain	PF02854	IPR003890	GO:0005515 GO:0016070
PGM_PMM_III	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	PF02880	IPR005846	GO:0005975 GO:0016868
Sec63	Sec63 Brl domain	PF02889	IPR004179
RNase_PH_C	3' exoribonuclease family, domain 2	PF03725	IPR015847	GO:0000175 GO:0003723 GO:0006396
DbpA	DbpA RNA binding domain	PF03880	IPR005580
CBF	CBF/Mak21 family	PF03914	IPR005612
Ribosomal_L2_C	Ribosomal Proteins L2, C-terminal domain	PF03947	IPR022669	GO:0003735 GO:0005622 GO:0005840 GO:0006412
PWP2	Periodic tryptophan protein 2 WD repeat associated presumed domain	PF04047
Coatomer_WDAD	Coatomer WD associated region	PF04053	IPR006692	GO:0005198 GO:0005515 GO:0006886 GO:0016192 GO:0030117
CHL4	Kinetochore protein CHL4 like	PF05238	IPR007902
KRE9	Yeast cell wall synthesis protein KRE9/KNH1	PF05390	IPR008659	GO:0005576 GO:0042546
CTP_synth_N	CTP synthase N-terminus	PF06418	IPR017456	GO:0003883 GO:0006221
EGF_CA	Calcium binding EGF domain	PF07645	IPR013091
DUF1753	Golgi protein of unknown function (DUF1753)	PF08552	IPR013862