Pfam ID |
Description |
Accession |
Interpro ID |
GO ID |
Notes |
Source |
efhand |
EF hand |
PF00036 |
IPR018248 |
|
 |
|
Metallophos |
Calcineurin-like phosphoesterase |
PF00149 |
IPR004843 |
|
 |
|
Pro_isomerase |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
PF00160 |
IPR002130 |
|
 |
|
FKBP_C |
FKBP-type peptidyl-prolyl cis-trans isomerase |
PF00254 |
IPR001179 |
|
 |
|
TPR_1 |
Tetratricopeptide repeat |
PF00515 |
IPR001440 |
|
 |
|
PDZ |
PDZ domain (Also known as DHR or GLGF) |
PF00595 |
IPR001478 |
|
 |
|
B56 |
Protein phosphatase 2A regulatory B subunit (B56 family) |
PF01603 |
IPR002554 |
|
 |
|
5_nucleotid_C |
5'-nucleotidase, C-terminal domain |
PF02872 |
IPR008334 |
|
 |
|
HEAT |
HEAT repeat |
PF02985 |
IPR000357 |
|
 |
|
IPP-2 |
Protein phosphatase inhibitor 2 (IPP-2) |
PF04979 |
IPR007062 |
|
 |
|
PPP5 |
PPP5 |
PF08321 |
IPR013235 |
|
 |
|
Pkinase |
Protein kinase domain |
PF00069 |
IPR017442 |
|
 |
|
Proteasome |
Proteasome A-type and B-type |
PF00227 |
IPR001353 |
|
 |
|
WD40 |
WD domain, G-beta repeat |
PF00400 |
IPR019781 |
|
 |
|
RhoGAP |
RhoGAP domain |
PF00620 |
IPR000198 |
|
 |
|
Ferrochelatase |
Ferrochelatase |
PF00762 |
IPR001015 |
|
 |
|
cNMP_binding |
Cyclic nucleotide-binding domain |
PF00027 |
IPR000595 |
|
 |
|
Gp_dh_N |
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain |
PF00044 |
IPR020828 |
|
 |
|
RRM_1 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
PF00076 |
IPR000504 |
|
 |
|
zf-C2H2 |
Zinc finger, C2H2 type |
PF00096 |
IPR007087 |
|
 |
|
Cpn60_TCP1 |
TCP-1/cpn60 chaperonin family |
PF00118 |
IPR002423 |
|
 |
|
ATP-synt |
ATP synthase |
PF00231 |
IPR000131 |
|
 |
|
PFK |
Phosphofructokinase |
PF00365 |
IPR000023 |
|
 |
|
AMP-binding |
AMP-binding enzyme |
PF00501 |
IPR000873 |
|
 |
|
Abhydrolase_1 |
alpha/beta hydrolase fold |
PF00561 |
IPR000073 |
|
 |
|
RNA_pol_Rpb2_6 |
RNA polymerase Rpb2, domain 6 |
PF00562 |
IPR007120 |
|
 |
|
UPF0016 |
Uncharacterized protein family UPF0016 |
PF01169 |
IPR001727 |
|
 |
|
LSM |
LSM domain |
PF01423 |
IPR001163 |
|
 |
|
NTP_transf_2 |
Nucleotidyltransferase domain |
PF01909 |
IPR002934 |
|
 |
|
GST_N |
Glutathione S-transferase, N-terminal domain |
PF02798 |
IPR004045 |
|
 |
|
AAA |
ATPase family associated with various cellular activities (AAA) |
PF00004 |
IPR003959 |
|
 |
|
SH3_1 |
SH3 domain |
PF00018 |
IPR001452 |
|
 |
|
Actin |
Actin |
PF00022 |
IPR004000 |
|
 |
|
GST_C |
Glutathione S-transferase, C-terminal domain |
PF00043 |
IPR004046 |
|
 |
|
Ldh_1_N |
lactate/malate dehydrogenase, NAD binding domain |
PF00056 |
IPR001236 |
|
 |
|
Myosin_head |
Myosin head (motor domain) |
PF00063 |
IPR001609 |
|
 |
|
Pyr_redox |
Pyridine nucleotide-disulphide oxidoreductase |
PF00070 |
IPR001327 |
|
 |
|
Response_reg |
Response regulator receiver domain |
PF00072 |
IPR001789 |
|
 |
|
Sugar_tr |
Sugar (and other) transporter |
PF00083 |
IPR005828 |
|
 |
|
Histone |
Core histone H2A/H2B/H3/H4 |
PF00125 |
IPR007125 |
|
 |
|
HSP90 |
Hsp90 protein |
PF00183 |
IPR020576 |
|
 |
|
TPP_enzyme_M |
Thiamine pyrophosphate enzyme, central domain |
PF00205 |
IPR012000 |
|
 |
|
Ribonuc_red_sm |
Ribonucleotide reductase, small chain |
PF00268 |
IPR000358 |
|
 |
|
DEAD |
DEAD/DEAH box helicase |
PF00270 |
IPR011545 |
|
 |
|
Helicase_C |
Helicase conserved C-terminal domain |
PF00271 |
IPR001650 |
|
 |
|
CPSase_L_chain |
Carbamoyl-phosphate synthase L chain, N-terminal domain |
PF00289 |
IPR005481 |
|
 |
|
PfkB |
pfkB family carbohydrate kinase |
PF00294 |
IPR011611 |
|
 |
|
Glyco_hydro_17 |
Glycosyl hydrolases family 17 |
PF00332 |
IPR000490 |
|
 |
|
Biotin_lipoyl |
Biotin-requiring enzyme |
PF00364 |
IPR000089 |
|
 |
|
TFIIB |
Transcription factor TFIIB repeat |
PF00382 |
IPR013150 |
|
 |
|
HSF_DNA-bind |
HSF-type DNA-binding |
PF00447 |
IPR000232 |
|
 |
|
Fe-ADH |
Iron-containing alcohol dehydrogenase |
PF00465 |
IPR001670 |
|
 |
|
FHA |
FHA domain |
PF00498 |
IPR000253 |
|
 |
|
BRCT |
BRCA1 C Terminus (BRCT) domain |
PF00533 |
IPR001357 |
|
 |
|
Glycos_transf_1 |
Glycosyl transferases group 1 |
PF00534 |
IPR001296 |
|
 |
|
SNase |
Staphylococcal nuclease homologue |
PF00565 |
IPR006021 |
|
 |
|
S1 |
S1 RNA binding domain |
PF00575 |
IPR003029 |
|
 |
|
IQ |
IQ calmodulin-binding motif |
PF00612 |
IPR000048 |
|
 |
|
zf-CCCH |
Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
PF00642 |
IPR000571 |
|
 |
|
EF1G |
Elongation factor 1 gamma, conserved domain |
PF00647 |
IPR001662 |
|
 |
|
Copper-fist |
Copper fist DNA binding domain |
PF00649 |
IPR001083 |
|
 |
|
AA_kinase |
Amino acid kinase family |
PF00696 |
IPR001048 |
|
 |
|
Carboxyl_trans |
Carboxyl transferase domain |
PF01039 |
IPR000022 |
|
 |
|
PCMT |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
PF01135 |
IPR000682 |
|
 |
|
TSC22 |
TSC-22/dip/bun family |
PF01166 |
IPR000580 |
|
 |
|
RNA_pol_L |
RNA polymerase Rpb3/Rpb11 dimerisation domain |
PF01193 |
IPR011261 |
|
 |
|
tRNA_anti |
OB-fold nucleic acid binding domain |
PF01336 |
IPR004365 |
|
 |
|
Kelch_1 |
Kelch motif |
PF01344 |
IPR006652 |
|
 |
|
FYVE |
FYVE zinc finger |
PF01363 |
IPR000306 |
|
 |
|
PUA |
PUA domain |
PF01472 |
IPR002478 |
|
 |
|
Aa_trans |
Transmembrane amino acid transporter protein |
PF01490 |
IPR013057 |
|
 |
|
PIP5K |
Phosphatidylinositol-4-phosphate 5-Kinase |
PF01504 |
IPR002498 |
|
 |
|
FtsJ |
FtsJ-like methyltransferase |
PF01728 |
IPR002877 |
|
 |
|
Diphthamide_syn |
Putative diphthamide synthesis protein |
PF01866 |
IPR002728 |
|
 |
|
eIF-5_eIF-2B |
Domain found in IF2B/IF5 |
PF01873 |
IPR002735 |
|
 |
|
RIIa |
Regulatory subunit of type II PKA R-subunit |
PF02197 |
IPR003117 |
|
 |
|
STE |
STE like transcription factor |
PF02200 |
IPR003120 |
|
 |
|
Flavoprotein |
Flavoprotein |
PF02441 |
IPR003382 |
|
 |
|
HATPase_c |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
PF02518 |
IPR003594 |
|
 |
|
Tyr_Deacylase |
D-Tyr-tRNA(Tyr) deacylase |
PF02580 |
IPR003732 |
|
 |
|
Biotin_carb_C |
Biotin carboxylase C-terminal domain |
PF02785 |
IPR005482 |
|
 |
|
CPSase_L_D2 |
Carbamoyl-phosphate synthase L chain, ATP binding domain |
PF02786 |
IPR005479 |
|
 |
|
Gp_dh_C |
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain |
PF02800 |
IPR020829 |
|
 |
|
ATP_bind_1 |
Conserved hypothetical ATP binding protein |
PF03029 |
IPR004130 |
|
 |
|
Vps35 |
Vacuolar protein sorting-associated protein 35 |
PF03635 |
IPR005378 |
|
 |
|
Vps26 |
Vacuolar protein sorting-associated protein 26 |
PF03643 |
IPR005377 |
|
 |
|
Malic_M |
Malic enzyme, NAD binding domain |
PF03949 |
IPR012302 |
|
 |
|
Mre11_DNA_bind |
Mre11 DNA-binding presumed domain |
PF04152 |
IPR007281 |
|
 |
|
Glu_syn_central |
Glutamate synthase central domain |
PF04898 |
IPR006982 |
|
 |
|
PAP_central |
Poly(A) polymerase central domain |
PF04928 |
IPR007012 |
|
 |
|
SapB_1 |
Saposin-like type B, region 1 |
PF05184 |
IPR007856 |
|
 |
|
MutS_III |
MutS domain III |
PF05192 |
IPR007696 |
|
 |
|
SNARE |
SNARE domain |
PF05739 |
IPR000727 |
|
 |
|
TIP49 |
TIP49 C-terminus |
PF06068 |
IPR010339 |
|
 |
|
Pescadillo_N |
Pescadillo N-terminus |
PF06732 |
IPR010613 |
|
 |
|
MFS_1 |
Major Facilitator Superfamily |
PF07690 |
IPR011701 |
|
 |
|
Pyr_redox_2 |
Pyridine nucleotide-disulphide oxidoreductase |
PF07992 |
IPR013027 |
|
 |
|
TFIIB_Zn_Ribbon |
TFIIB zinc-binding |
PF08271 |
IPR013137 |
|
 |
|
HMG_CoA_synt_C |
Hydroxymethylglutaryl-coenzyme A synthase C terminal |
PF08540 |
IPR013746 |
|
 |
|