Pfam ID Description Accession Interpro ID GO ID
PDZ PDZ domain (Also known as DHR or GLGF) PF00595 IPR001478
GO:0005515



PDZ forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
fn3 Fibronectin type III domain PF00041 IPR003961
PDB 3DID
Ras Ras family PF00071 IPR013753
PDB IPFAM 3DID ME
Trypsin Trypsin PF00089 IPR001254
GO:0004252
GO:0006508
 PDB IPFAM 3DID ME FUSION DIPD
Metallophos Calcineurin-like phosphoesterase PF00149 IPR004843
GO:0016787
 PDB 3DID
SAM_1 SAM domain (Sterile alpha motif) PF00536 IPR021129
PDB 3DID FUSION
PDZ PDZ domain (Also known as DHR or GLGF) PF00595 IPR001478
GO:0005515
 PDB IPFAM 3DID ME PE DIPD
Peptidase_S41 Peptidase family S41 PF03572 IPR005151
GO:0006508
GO:0008236
 PDB IPFAM 3DID ME FUSION
EB1_binding EB-1 Binding Domain PF05937 IPR009232
GO:0005515
GO:0016055
 PDB IPFAM
EBP50_C-term EBP50, C-terminal PF09007 IPR015098
PDB 3DID
7tm_1 7 transmembrane receptor (rhodopsin family) PF00001 IPR000276
GO:0007186
GO:0016021
 HCP ME
SH3_1 SH3 domain PF00018 IPR001452
HCP ME FUSION
Lig_chan Ligand-gated ion channel PF00060 IPR001320
GO:0004970
GO:0005234
GO:0016020
 HCP ME KGIDDI
Myosin_head Myosin head (motor domain) PF00063 IPR001609
GO:0003774
GO:0005524
GO:0016459
 HCP ME FUSION
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
 HCP ME FUSION
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270
 HCP ME RDFF
Y_phosphatase Protein-tyrosine phosphatase PF00102 IPR000242
GO:0004725
GO:0006470
 HCP ME FUSION
C2 C2 domain PF00168 IPR000008
HCP ME FUSION
CH Calponin homology (CH) domain PF00307 IPR001715
HCP ME PE
FERM_M FERM central domain PF00373 IPR019748
HCP ME FUSION
WW WW domain PF00397 IPR001202
GO:0005515
 HCP ME FUSION
Pkinase_C Protein kinase C terminal domain PF00433 IPR017892
GO:0004674
GO:0005524
GO:0006468
 HCP ME GPE
LRR_1 Leucine Rich Repeat PF00560 IPR001611
GO:0005515
 HCP ME
RhoGEF RhoGEF domain PF00621 IPR000219
GO:0005089
GO:0005622
GO:0035023
 HCP ME FUSION
Guanylate_kin Guanylate kinase PF00625 IPR008144
HCP ME FUSION DIPD
PID Phosphotyrosine interaction domain (PTB/PID) PF00640 IPR006020
HCP ME FUSION DIPD
ERM Ezrin/radixin/moesin family PF00769 IPR011259
GO:0005737
GO:0008092
GO:0019898
 HCP ME DIPD
DIX DIX domain PF00778 IPR001158
GO:0004871
GO:0005622
GO:0007275
 HCP FUSION GPE DIPD
RA Ras association (RalGDS/AF-6) domain PF00788 IPR000159
GO:0007165
 HCP ME FUSION
Ephrin Ephrin PF00812 IPR001799
GO:0016020
 HCP ME
NO_synthase Nitric oxide synthase, oxygenase domain PF02898 IPR004030
GO:0004517
GO:0006809
GO:0055114
 HCP ME FUSION
MH2 MH2 domain PF03166 IPR001132
GO:0005622
GO:0006355
 HCP ME
HOOK HOOK protein PF05622
GO:0000226
GO:0005737
GO:0008017
 HCP DPEA PE GPE DIPD
p450 Cytochrome P450 PF00067 IPR001128
GO:0004497
GO:0005506
GO:0009055
GO:0020037
 MCP PE DIPD
PH PH domain PF00169 IPR001849
MCP FUSION PE
Proteasome Proteasome A-type and B-type PF00227 IPR001353
GO:0004298
GO:0005839
GO:0051603
 MCP RDFF INSITE
LIM LIM domain PF00412 IPR001781
GO:0008270
 MCP FUSION PE
PB1 PB1 domain PF00564 IPR000270
MCP FUSION DIPD
DEP Domain found in Dishevelled, Egl-10, and Pleckstrin PF00610 IPR000591
GO:0023034
 MCP FUSION GPE
RGS Regulator of G protein signaling domain PF00615 IPR000342
GO:0004871
 MCP FUSION GPE
K_tetra K+ channel tetramerisation domain PF02214 IPR003131
GO:0005249
GO:0006813
GO:0008076
GO:0016020
 MCP PE DIPD
Dishevelled Dishevelled specific domain PF02377 IPR003351
GO:0004871
GO:0007275
 MCP GPE DIPD
Sina Seven in absentia protein family PF03145 IPR018121
GO:0005634
GO:0006511
GO:0007275
 MCP GPE DIPD
MSSP Male specific sperm protein PF03940 IPR005634
MCP DPEA PE DIPD
AAA ATPase family associated with various cellular activities (AAA) PF00004 IPR003959
GO:0005524
 LCP RDFF
ABC_tran ABC transporter PF00005 IPR003439
GO:0005524
GO:0016887
 LCP KGIDDI
GTP_EFTU Elongation factor Tu GTP binding domain PF00009 IPR000795
GO:0003924
GO:0005525
 LCP GPE
HSP20 Hsp20/alpha crystallin family PF00011 IPR002068
LCP PE
KH_1 KH domain PF00013 IPR018111
GO:0003723
 LCP PE
Ank Ankyrin repeat PF00023 IPR002110
LCP FUSION
cNMP_binding Cyclic nucleotide-binding domain PF00027 IPR000595
LCP FUSION
Kazal_1 Kazal-type serine protease inhibitor domain PF00050 IPR002350
LCP FUSION
Lectin_C Lectin C-type domain PF00059 IPR001304
GO:0005488
 LCP DIPD
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
 LCP DIPD
TSP_1 Thrombospondin type 1 domain PF00090 IPR000884
LCP DIPD
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
LCP FUSION
zf-C4 Zinc finger, C4 type (two domains) PF00105 IPR001628
GO:0003700
GO:0005634
GO:0006355
GO:0008270
GO:0043565
 LCP PE
Peptidase_C1 Papain family cysteine protease PF00112 IPR000668
GO:0006508
GO:0008234
 LCP DIPD
E1-E2_ATPase E1-E2 ATPase PF00122 IPR008250
GO:0005524
GO:0006754
GO:0016020
GO:0016820
 LCP KGIDDI
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) PF00130 IPR002219
GO:0023034
 LCP GPE
NAD_binding_1 Oxidoreductase NAD-binding domain PF00175 IPR001433
GO:0016491
GO:0055114
 LCP FUSION
UQ_con Ubiquitin-conjugating enzyme PF00179 IPR000608
GO:0019787
GO:0043687
GO:0051246
 LCP PE
Ribosomal_S3_C Ribosomal protein S3, C-terminal domain PF00189 IPR001351
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIPD
Lyase_1 Lyase PF00206 IPR022761
LCP PE
Flavodoxin_1 Flavodoxin PF00258 IPR008254
GO:0010181
GO:0016491
 LCP FUSION
CSD 'Cold-shock' DNA-binding domain PF00313 IPR002059
GO:0003677
GO:0006355
 LCP PE
PI-PLC-Y Phosphatidylinositol-specific phospholipase C, Y domain PF00387 IPR001711
GO:0004435
GO:0006629
GO:0007165
GO:0023034
 LCP KGIDDI
PI-PLC-X Phosphatidylinositol-specific phospholipase C, X domain PF00388 IPR000909
GO:0004629
GO:0006629
GO:0023034
 LCP KGIDDI
FHA FHA domain PF00498 IPR000253
LCP FUSION
ZZ Zinc finger, ZZ type PF00569 IPR000433
GO:0008270
 LCP PE
IQ IQ calmodulin-binding motif PF00612 IPR000048
LCP FUSION
RasGEF RasGEF domain PF00617 IPR001895
GO:0005085
GO:0005622
GO:0007264
 LCP FUSION
RasGEF_N Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif PF00618 IPR000651
GO:0005085
GO:0005622
GO:0051056
 LCP FUSION
zf-B_box B-box zinc finger PF00643 IPR000315
GO:0005622
GO:0008270
 LCP DIPD
BTB BTB/POZ domain PF00651 IPR013069
GO:0005515
 LCP PE
FAD_binding_1 FAD binding domain PF00667 IPR003097
GO:0016491
GO:0055114
 LCP FUSION
Hydrolase haloacid dehalogenase-like hydrolase PF00702 IPR005834
GO:0003824
GO:0008152
 LCP KGIDDI
ZU5 ZU5 domain PF00791 IPR000906
LCP FUSION
IF_tail Intermediate filament tail domain PF00932 IPR001322
LCP DIPD
Collagen Collagen triple helix repeat (20 copies) PF01391 IPR008160
LCP DIPD
Col_cuticle_N Nematode cuticle collagen N-terminal domain PF01484 IPR002486
GO:0042302
 LCP DIPD
CBM_14 Chitin binding Peritrophin-A domain PF01607 IPR002557
GO:0005576
GO:0006030
GO:0008061
 LCP DIPD
DIL DIL domain PF01843 IPR018444
LCP FUSION
Rap_GAP Rap/ran-GAP PF02145 IPR000331
GO:0005096
GO:0005622
GO:0051056
 LCP FUSION
Peptidase_M50 Peptidase family M50 PF02163 IPR008915
GO:0004222
GO:0006508
 LCP FUSION
HR1 Hr1 repeat PF02185 IPR000861
GO:0005622
GO:0007165
 LCP FUSION
GoLoco GoLoco motif PF02188 IPR003109
GO:0005096
GO:0007165
 LCP FUSION
RBD Raf-like Ras-binding domain PF02196 IPR003116
GO:0005057
GO:0007165
 LCP FUSION
RPH3A_effector Rabphilin-3A effector domain PF02318 IPR003315
GO:0005515
GO:0006886
GO:0008270
GO:0017137
 LCP FUSION
L27 L27 domain PF02828 IPR014775
LCP FUSION
BRO1 BRO1-like domain PF03097 IPR004328
LCP FUSION
GTP_EFTU_D3 Elongation factor Tu C-terminal domain PF03143 IPR004160
GO:0005525
 LCP GPE
GTP_EFTU_D2 Elongation factor Tu domain 2 PF03144 IPR004161
GO:0005525
 LCP GPE
DCX Doublecortin PF03607 IPR003533
GO:0023034
 LCP DIPD
Arfaptin Arfaptin-like domain PF06456 IPR010504
LCP FUSION
DUF1213 Protein of unknown function (DUF1213) PF06740 IPR009603
LCP PE
EGF_CA Calcium binding EGF domain PF07645 IPR013091
LCP PE
KH_2 KH domain PF07650 IPR004044
GO:0003723
 LCP DIPD
SH3_2 Variant SH3 domain PF07653 IPR011511
LCP GPE



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