| Pfam ID |
Description |
Accession |
Interpro ID |
GO ID |
Notes |
Source |
| GTP_EFTU |
Elongation factor Tu GTP binding domain |
PF00009 |
IPR000795 |
|
 |
|
| MHC_I |
Class I Histocompatibility antigen, domains alpha 1 and 2 |
PF00129 |
IPR001039 |
|
 |
|
| UBA |
UBA/TS-N domain |
PF00627 |
IPR000449 |
|
 |
|
| EFG_C |
Elongation factor G C-terminus |
PF00679 |
IPR000640 |
|
 |
|
| EF1_GNE |
EF-1 guanine nucleotide exchange domain |
PF00736 |
IPR014038 |
|
 |
|
| EF_TS |
Elongation factor TS |
PF00889 |
IPR014039 |
|
 |
|
| PAPS_reduct |
Phosphoadenosine phosphosulfate reductase family |
PF01507 |
IPR002500 |
|
 |
|
| eIF-5_eIF-2B |
Domain found in IF2B/IF5 |
PF01873 |
IPR002735 |
|
 |
|
| MMR_HSR1 |
GTPase of unknown function |
PF01926 |
IPR002917 |
|
 |
|
| GTP_EFTU_D3 |
Elongation factor Tu C-terminal domain |
PF03143 |
IPR004160 |
|
 |
|
| GTP_EFTU_D2 |
Elongation factor Tu domain 2 |
PF03144 |
IPR004161 |
|
 |
|
| RNA_replicase_B |
RNA replicase, beta-chain |
PF03431 |
IPR005093 |
|
 |
|
| EFG_IV |
Elongation factor G, domain IV |
PF03764 |
IPR005517 |
|
 |
|
| LepA_C |
GTP-binding protein LepA C-terminus |
PF06421 |
IPR013842 |
|
 |
|
| V-set |
Immunoglobulin V-set domain |
PF07686 |
IPR013106 |
|
 |
|
| eIF2_C |
Initiation factor eIF2 gamma, C terminal |
PF09173 |
IPR015256 |
|
 |
|
| ABC_tran |
ABC transporter |
PF00005 |
IPR003439 |
|
 |
|
| IF-2B |
Initiation factor 2 subunit family |
PF01008 |
IPR000649 |
|
 |
|
| LSM |
LSM domain |
PF01423 |
IPR001163 |
|
 |
|
| APS_kinase |
Adenylylsulphate kinase |
PF01583 |
IPR002891 |
|
 |
|
| Pkinase |
Protein kinase domain |
PF00069 |
IPR017442 |
|
 |
|
| WD40 |
WD domain, G-beta repeat |
PF00400 |
IPR019781 |
|
 |
|
| Ribosomal_L13 |
Ribosomal protein L13 |
PF00572 |
IPR005822 |
|
 |
|
| S1 |
S1 RNA binding domain |
PF00575 |
IPR003029 |
|
 |
|
| EF1G |
Elongation factor 1 gamma, conserved domain |
PF00647 |
IPR001662 |
|
 |
|
| Skp1 |
Skp1 family, dimerisation domain |
PF01466 |
IPR016072 |
|
 |
|
| PUA |
PUA domain |
PF01472 |
IPR002478 |
|
 |
|
| SKIP_SNW |
SKIP/SNW domain |
PF02731 |
IPR004015 |
|
 |
|
| GST_N |
Glutathione S-transferase, N-terminal domain |
PF02798 |
IPR004045 |
|
 |
|
| 7tm_1 |
7 transmembrane receptor (rhodopsin family) |
PF00001 |
IPR000276 |
|
 |
|
| AAA |
ATPase family associated with various cellular activities (AAA) |
PF00004 |
IPR003959 |
|
 |
|
| SH3_1 |
SH3 domain |
PF00018 |
IPR001452 |
|
 |
|
| Actin |
Actin |
PF00022 |
IPR004000 |
|
 |
|
| GST_C |
Glutathione S-transferase, C-terminal domain |
PF00043 |
IPR004046 |
|
 |
|
| Homeobox |
Homeobox domain |
PF00046 |
IPR001356 |
|
 |
|
| Ras |
Ras family |
PF00071 |
IPR013753 |
|
 |
|
| RRM_1 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
PF00076 |
IPR000504 |
|
 |
|
| zf-C3HC4 |
Zinc finger, C3HC4 type (RING finger) |
PF00097 |
IPR018957 |
|
 |
|
| Hormone_recep |
Ligand-binding domain of nuclear hormone receptor |
PF00104 |
IPR000536 |
|
 |
|
| zf-C4 |
Zinc finger, C4 type (two domains) |
PF00105 |
IPR001628 |
|
 |
|
| Hexapep |
Bacterial transferase hexapeptide (three repeats) |
PF00132 |
IPR001451 |
|
 |
|
| Cyclin_N |
Cyclin, N-terminal domain |
PF00134 |
IPR006671 |
|
 |
|
| Mito_carr |
Mitochondrial carrier protein |
PF00153 |
IPR018108 |
|
 |
|
| UQ_con |
Ubiquitin-conjugating enzyme |
PF00179 |
IPR000608 |
|
 |
|
| Myb_DNA-binding |
Myb-like DNA-binding domain |
PF00249 |
IPR014778 |
|
 |
|
| Helicase_C |
Helicase conserved C-terminal domain |
PF00271 |
IPR001650 |
|
 |
|
| GATA |
GATA zinc finger |
PF00320 |
IPR000679 |
|
 |
|
| AA_permease |
Amino acid permease |
PF00324 |
IPR004841 |
|
 |
|
| Chromo |
'chromo' (CHRromatin Organisation MOdifier) domain |
PF00385 |
IPR000953 |
|
 |
|
| LIM |
LIM domain |
PF00412 |
IPR001781 |
|
 |
|
| AMP-binding |
AMP-binding enzyme |
PF00501 |
IPR000873 |
|
 |
|
| ZZ |
Zinc finger, ZZ type |
PF00569 |
IPR000433 |
|
 |
|
| AhpC-TSA |
AhpC/TSA family |
PF00578 |
IPR000866 |
|
 |
|
| PDZ |
PDZ domain (Also known as DHR or GLGF) |
PF00595 |
IPR001478 |
|
 |
|
| DEP |
Domain found in Dishevelled, Egl-10, and Pleckstrin |
PF00610 |
IPR000591 |
|
 |
|
| Ran_BP1 |
RanBP1 domain |
PF00638 |
IPR000156 |
|
 |
|
| zf-B_box |
B-box zinc finger |
PF00643 |
IPR000315 |
|
 |
|
| F-box |
F-box domain |
PF00646 |
IPR001810 |
|
 |
|
| THF_DHG_CYH |
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain |
PF00763 |
IPR020630 |
|
 |
|
| RNB |
RNB domain |
PF00773 |
IPR001900 |
|
 |
|
| PUF |
Pumilio-family RNA binding repeat |
PF00806 |
IPR001313 |
|
 |
|
| SET |
SET domain |
PF00856 |
IPR001214 |
|
 |
|
| Adap_comp_sub |
Adaptor complexes medium subunit family |
PF00928 |
IPR008968 |
|
 |
|
| RNase_PH |
3' exoribonuclease family, domain 1 |
PF01138 |
IPR001247 |
|
 |
|
| RNA_pol_L |
RNA polymerase Rpb3/Rpb11 dimerisation domain |
PF01193 |
IPR011261 |
|
 |
|
| Clat_adaptor_s |
Clathrin adaptor complex small chain |
PF01217 |
|
|
 |
|
| Ribosomal_L7Ae |
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family |
PF01248 |
IPR004038 |
|
 |
|
| FTHFS |
Formate--tetrahydrofolate ligase |
PF01268 |
IPR000559 |
|
 |
|
| Fibrillarin |
Fibrillarin |
PF01269 |
IPR000692 |
|
 |
|
| TruB_N |
TruB family pseudouridylate synthase (N terminal domain) |
PF01509 |
IPR002501 |
|
 |
|
| Nop |
Putative snoRNA binding domain |
PF01798 |
IPR002687 |
|
 |
|
| W2 |
eIF4-gamma/eIF5/eIF2-epsilon |
PF02020 |
IPR003307 |
|
 |
|
| K_tetra |
K+ channel tetramerisation domain |
PF02214 |
IPR003131 |
|
 |
|
| ERCC4 |
ERCC4 domain |
PF02732 |
IPR006166 |
|
 |
|
| Ku |
Ku70/Ku80 beta-barrel domain |
PF02735 |
IPR006164 |
|
 |
|
| MIF4G |
MIF4G domain |
PF02854 |
IPR003890 |
|
 |
|
| THF_DHG_CYH_C |
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
PF02882 |
IPR020631 |
|
 |
|
| Cyclin_C |
Cyclin, C-terminal domain |
PF02984 |
IPR004367 |
|
 |
|
| eRF1_1 |
eRF1 domain 1 |
PF03463 |
IPR005140 |
|
 |
|
| eRF1_3 |
eRF1 domain 3 |
PF03465 |
IPR005142 |
|
 |
|
| RNase_PH_C |
3' exoribonuclease family, domain 2 |
PF03725 |
IPR015847 |
|
 |
|
| SPK |
Domain of unknown function (DUF545) |
PF04435 |
IPR006570 |
|
 |
|
| Pre-SET |
Pre-SET motif |
PF05033 |
IPR007728 |
|
 |
|
| D123 |
D123 |
PF07065 |
IPR009772 |
|
 |
|
| EIF_2_alpha |
Eukaryotic translation initiation factor 2 alpha subunit |
PF07541 |
IPR011488 |
|
 |
|
| AAA_2 |
ATPase family associated with various cellular activities (AAA) |
PF07724 |
IPR013093 |
|
 |
|