Pfam ID
Description
Accession
Interpro ID
GO ID
UBA
UBA/TS-N domain
PF00627
IPR000449
UBA
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
GTP_EFTU
Elongation factor Tu GTP binding domain
PF00009
IPR000795
GO:0003924
GO:0005525
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
UQ_con
Ubiquitin-conjugating enzyme
PF00179
IPR000608
GO:0019787
GO:0043687
GO:0051246
ubiquitin
Ubiquitin family
PF00240
IPR000626
UCH
Ubiquitin carboxyl-terminal hydrolase
PF00443
IPR001394
GO:0004221
GO:0006511
UBA
UBA/TS-N domain
PF00627
IPR000449
EF_TS
Elongation factor TS
PF00889
IPR014039
GO:0003746
GO:0005622
GO:0006414
NAC
NAC domain
PF01849
IPR002715
XPC-binding
XPC-binding domain
PF09280
IPR015360
GO:0003684
GO:0006289
GO:0043161
AAA
ATPase family associated with various cellular activities (AAA)
PF00004
IPR003959
GO:0005524
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
Thioredoxin
Thioredoxin
PF00085
IPR013766
GO:0045454
zf-C2H2
Zinc finger, C2H2 type
PF00096
IPR007087
GO:0005622
GO:0008270
zf-C3HC4
Zinc finger, C3HC4 type (RING finger)
PF00097
IPR018957
HECT
HECT-domain (ubiquitin-transferase)
PF00632
IPR000569
GO:0005622
GO:0006464
GO:0016881
SH3_1
SH3 domain
PF00018
IPR001452
efhand
EF hand
PF00036
IPR018248
Aldose_epim
Aldose 1-epimerase
PF01263
IPR008183
GO:0005975
GO:0016853
PCI
PCI domain
PF01399
IPR000717
PC_rep
Proteasome/cyclosome repeat
PF01851
IPR002015
SH2
SH2 domain
PF00017
IPR000980
GO:0005515
Ras
Ras family
PF00071
IPR013753
RVP
Retroviral aspartyl protease
PF00077
IPR018061
ADH_zinc_N
Zinc-binding dehydrogenase
PF00107
IPR013149
GO:0008270
GO:0016491
GO:0055114
Histone
Core histone H2A/H2B/H3/H4
PF00125
IPR007125
GO:0003677
PH
PH domain
PF00169
IPR001849
bZIP_1
bZIP transcription factor
PF00170
IPR011616
GO:0003700
GO:0006355
GO:0043565
GO:0046983
Proteasome
Proteasome A-type and B-type
PF00227
IPR001353
GO:0004298
GO:0005839
GO:0051603
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
PGAM
Phosphoglycerate mutase family
PF00300
IPR013078
Chitin_bind_4
Insect cuticle protein
PF00379
IPR000618
GO:0042302
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PF00389
IPR006139
GO:0008152
GO:0016616
GO:0051287
WD40
WD domain, G-beta repeat
PF00400
IPR019781
TBC
TBC domain
PF00566
IPR000195
GO:0005097
GO:0005622
GO:0032313
TUDOR
Tudor domain
PF00567
IPR008191
AhpC-TSA
AhpC/TSA family
PF00578
IPR000866
GO:0016209
GO:0016491
RNA_pol_Rpb1_2
RNA polymerase Rpb1, domain 2
PF00623
IPR000722
GO:0003677
GO:0003899
GO:0006350
UBX
UBX domain
PF00789
IPR001012
IF-2B
Initiation factor 2 subunit family
PF01008
IPR000649
GO:0044237
XPA_N
XPA protein N-terminal
PF01286
Mov34
Mov34/MPN/PAD-1 family
PF01398
IPR000555
ArfGap
Putative GTPase activating protein for Arf
PF01412
IPR001164
GO:0008060
GO:0008270
GO:0032312
ENTH
ENTH domain
PF01417
IPR001026
Rhomboid
Rhomboid family
PF01694
GO:0004252
GO:0016021
Glyco_transf_15
Glycolipid 2-alpha-mannosyltransferase
PF01793
IPR002685
GO:0004377
GO:0006486
GO:0016020
ACT
ACT domain
PF01842
IPR002912
GO:0008152
GO:0016597
PTH2
Peptidyl-tRNA hydrolase PTH2
PF01981
IPR002833
GO:0004045
GO:0006412
zf-UBP
Zn-finger in ubiquitin-hydrolases and other protein
PF02148
IPR001607
GO:0008270
KA1
Kinase associated domain 1
PF02149
IPR001772
GO:0004674
GO:0005524
GO:0006468
Cbl_N
CBL proto-oncogene N-terminal domain 1
PF02262
IPR003153
GO:0004871
GO:0005634
GO:0007166
Cbl_N2
CBL proto-oncogene N-terminus, EF hand-like domain
PF02761
IPR014741
GO:0004871
GO:0005634
GO:0007166
Cbl_N3
CBL proto-oncogene N-terminus, SH2-like domain
PF02762
IPR014742
GO:0004871
GO:0005634
GO:0007166
GTP_EFTU_D3
Elongation factor Tu C-terminal domain
PF03143
IPR004160
GO:0005525
GTP_EFTU_D2
Elongation factor Tu domain 2
PF03144
IPR004161
GO:0005525
NPR2
Nitrogen permease regulator 2
PF06218
IPR009348
NAD_Gly3P_dh_C
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PF07479
IPR006109
GO:0005975
GO:0016614
GO:0055114
ANTH
ANTH domain
PF07651
IPR011417
GO:0005543
Pkinase_Tyr
Protein tyrosine kinase
PF07714
IPR001245
GO:0004672
GO:0005524
GO:0006468
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Copyright © 2007, Raghavachari et al.
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