Pfam ID
Description
Accession
Interpro ID
GO ID
RVP
Retroviral aspartyl protease
PF00077
IPR018061
RVP
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
RVP
Retroviral aspartyl protease
PF00077
IPR018061
RVT_1
Reverse transcriptase (RNA-dependent DNA polymerase)
PF00078
IPR000477
GO:0003723
GO:0003964
GO:0006278
Gag_p17
gag gene protein p17 (matrix protein)
PF00540
IPR000071
GO:0005198
RnaseH
RNase H
PF00075
IPR002156
GO:0003676
GO:0004523
ubiquitin
Ubiquitin family
PF00240
IPR000626
Integrase
Integrase DNA binding domain
PF00552
IPR001037
GO:0003676
GO:0008907
Gag_p24
gag gene protein p24 (core nucleocapsid protein)
PF00607
IPR000721
GO:0016032
rve
Integrase core domain
PF00665
IPR001584
GO:0003677
GO:0015074
dUTPase
dUTPase
PF00692
IPR008180
GO:0016787
GO:0046080
Integrase_Zn
Integrase Zinc binding domain
PF02022
IPR003308
GO:0003677
GO:0008270
GO:0008907
GO:0015074
RVT_connect
Reverse transcriptase connection domain
PF06815
IPR010659
GO:0003964
GO:0006278
RVT_thumb
Reverse transcriptase thumb domain
PF06817
IPR010661
GO:0003964
GO:0006278
zf-CCHC
Zinc knuckle
PF00098
IPR001878
GO:0003676
GO:0008270
TBC
TBC domain
PF00566
IPR000195
GO:0005097
GO:0005622
GO:0032313
UBA
UBA/TS-N domain
PF00627
IPR000449
Aldose_epim
Aldose 1-epimerase
PF01263
IPR008183
GO:0005975
GO:0016853
G-patch
G-patch domain
PF01585
IPR000467
GO:0003676
GO:0005622
Gag_p10
Retroviral GAG p10 protein
PF02337
IPR003322
GO:0005198
GO:0019028
Retro_M
Retroviral M domain
PF02813
IPR004028
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Copyright © 2007, Raghavachari et al.
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