Pfam ID
Description
Accession
Interpro ID
GO ID
RnaseH
RNase H
PF00075
IPR002156
GO:0003676
GO:0004523
RnaseH
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
RnaseH
RNase H
PF00075
IPR002156
GO:0003676
GO:0004523
RVT_1
Reverse transcriptase (RNA-dependent DNA polymerase)
PF00078
IPR000477
GO:0003723
GO:0003964
GO:0006278
SBP_bac_1
Bacterial extracellular solute-binding protein
PF01547
IPR006059
GO:0005215
GO:0006810
RVT_connect
Reverse transcriptase connection domain
PF06815
IPR010659
GO:0003964
GO:0006278
RVT_thumb
Reverse transcriptase thumb domain
PF06817
IPR010661
GO:0003964
GO:0006278
RVP
Retroviral aspartyl protease
PF00077
IPR018061
Gag_p17
gag gene protein p17 (matrix protein)
PF00540
IPR000071
GO:0005198
Integrase
Integrase DNA binding domain
PF00552
IPR001037
GO:0003676
GO:0008907
Gag_p24
gag gene protein p24 (core nucleocapsid protein)
PF00607
IPR000721
GO:0016032
rve
Integrase core domain
PF00665
IPR001584
GO:0003677
GO:0015074
dUTPase
dUTPase
PF00692
IPR008180
GO:0016787
GO:0046080
Integrase_Zn
Integrase Zinc binding domain
PF02022
IPR003308
GO:0003677
GO:0008270
GO:0008907
GO:0015074
Homeobox
Homeobox domain
PF00046
IPR001356
GO:0003700
GO:0006355
GO:0043565
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
zf-C4
Zinc finger, C4 type (two domains)
PF00105
IPR001628
GO:0003700
GO:0005634
GO:0006355
GO:0008270
GO:0043565
PGAM
Phosphoglycerate mutase family
PF00300
IPR013078
EMP24_GP25L
emp24/gp25L/p24 family/GOLD
PF01105
IPR000348
GO:0006810
GO:0016021
Spuma_A9PTase
Spumavirus aspartic protease (A9)
PF03539
IPR001641
GO:0004190
GO:0006508
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Copyright © 2007, Raghavachari et al.
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