RVT_1

• Pfam ID: RVT_1
• Description: Reverse transcriptase (RNA-dependent DNA polymerase)
• Accession: PF00078
• Interpro ID: IPR000477
• GO ID:

  GO:0003723

  GO:0003964

  GO:0006278

RVT_1 forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
RnaseH	RNase H	PF00075	IPR002156	GO:0003676 GO:0004523
RVP	Retroviral aspartyl protease	PF00077	IPR018061
RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	PF00078	IPR000477	GO:0003723 GO:0003964 GO:0006278
MHC_I	Class I Histocompatibility antigen, domains alpha 1 and 2	PF00129	IPR001039	GO:0006955 GO:0016020 GO:0019882 GO:0042612
RVT_connect	Reverse transcriptase connection domain	PF06815	IPR010659	GO:0003964 GO:0006278
RVT_thumb	Reverse transcriptase thumb domain	PF06817	IPR010661	GO:0003964 GO:0006278
V-set	Immunoglobulin V-set domain	PF07686	IPR013106
Gag_p17	gag gene protein p17 (matrix protein)	PF00540	IPR000071	GO:0005198
Integrase	Integrase DNA binding domain	PF00552	IPR001037	GO:0003676 GO:0008907
Gag_p24	gag gene protein p24 (core nucleocapsid protein)	PF00607	IPR000721	GO:0016032
rve	Integrase core domain	PF00665	IPR001584	GO:0003677 GO:0015074
dUTPase	dUTPase	PF00692	IPR008180	GO:0016787 GO:0046080
HNH	HNH endonuclease	PF01844	IPR002711	GO:0003676 GO:0004519
Integrase_Zn	Integrase Zinc binding domain	PF02022	IPR003308	GO:0003677 GO:0008270 GO:0008907 GO:0015074
Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	PF03372	IPR005135
Lectin_C	Lectin C-type domain	PF00059	IPR001304	GO:0005488
zf-C2H2	Zinc finger, C2H2 type	PF00096	IPR007087	GO:0005622 GO:0008270
zf-CCHC	Zinc knuckle	PF00098	IPR001878	GO:0003676 GO:0008270
COX1	Cytochrome C and Quinol oxidase polypeptide I	PF00115	IPR000883	GO:0005506 GO:0009055 GO:0009060 GO:0016021 GO:0020037
Spuma_A9PTase	Spumavirus aspartic protease (A9)	PF03539	IPR001641	GO:0004190 GO:0006508