Pfam ID Description Accession Interpro ID GO ID
Myb_DNA-binding Myb-like DNA-binding domain PF00249 IPR014778



Myb_DNA-binding forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
Myb_DNA-binding Myb-like DNA-binding domain PF00249 IPR014778
PDB IPFAM 3DID ME
Amino_oxidase Flavin containing amine oxidoreductase PF01593 IPR002937
PDB 3DID
Rap1-DNA-bind Rap1, DNA-binding PF09197 IPR015280
PDB IPFAM
Response_reg Response regulator receiver domain PF00072 IPR001789
GO:0000156
GO:0000160
GO:0006355
HCP ME
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270
HCP ME RDFF
bZIP_1 bZIP transcription factor PF00170 IPR011616
GO:0003700
GO:0006355
GO:0043565
GO:0046983
HCP ME
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
HCP FUSION PE RDFF
BRCT BRCA1 C Terminus (BRCT) domain PF00533 IPR001357
GO:0005622
HCP ME FUSION
F-box F-box domain PF00646 IPR001810
HCP ME
Mov34 Mov34/MPN/PAD-1 family PF01398 IPR000555
HCP ME
HSP20 Hsp20/alpha crystallin family PF00011 IPR002068
MCP PE RDFF
Homeobox Homeobox domain PF00046 IPR001356
GO:0003700
GO:0006355
GO:0043565
MCP PE RDFF
SNF2_N SNF2 family N-terminal domain PF00176 IPR000330
GO:0003677
GO:0005524
MCP FUSION GPE
DnaJ DnaJ domain PF00226 IPR001623
GO:0031072
MCP FUSION RDFF
TBP Transcription factor TFIID (or TATA-binding protein, TBP) PF00352 IPR000814
GO:0003677
GO:0003702
GO:0006355
GO:0006367
MCP DPEA PE RDFF
Bromodomain Bromodomain PF00439 IPR001487
MCP PVALUE PE
PHD PHD-finger PF00628 IPR019787
MCP FUSION RDFF
BAH BAH domain PF01426 IPR001025
GO:0003677
MCP FUSION GPE
RFX_DNA_binding RFX DNA-binding domain PF02257 IPR003150
GO:0003677
GO:0006355
MCP GPE RDFF
TAF TATA box binding protein associated factor (TAF) PF02969 IPR004823
GO:0005634
GO:0006352
GO:0016986
MCP PVALUE RDFF
TFIID_30kDa Transcription initiation factor TFIID 23-30kDa subunit PF03540 IPR003923
GO:0003702
GO:0005634
GO:0006352
MCP PE GPE
SWIRM SWIRM domain PF04433 IPR007526
MCP FUSION GPE
GTP_EFTU Elongation factor Tu GTP binding domain PF00009 IPR000795
GO:0003924
GO:0005525
LCP RDFF
fn3 Fibronectin type III domain PF00041 IPR003961
LCP KGIDDI
zf-CCHC Zinc knuckle PF00098 IPR001878
GO:0003676
GO:0008270
LCP RDFF
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
GO:0003677
LCP INSITE
Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain PF00172 IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
LCP RDFF
Ribosomal_L16 Ribosomal protein L16p/L10e PF00252 IPR016180
GO:0003735
GO:0005840
GO:0006412
LCP RDFF
DEAD DEAD/DEAH box helicase PF00270 IPR011545
GO:0003676
GO:0005524
GO:0008026
LCP GPE
NUDIX NUDIX domain PF00293 IPR000086
GO:0016787
LCP RDFF
GATA GATA zinc finger PF00320 IPR000679
GO:0003700
GO:0006355
GO:0008270
GO:0043565
LCP FUSION
Dynamin_N Dynamin family PF00350 IPR001401
GO:0003924
GO:0005525
LCP RDFF
Chromo 'chromo' (CHRromatin Organisation MOdifier) domain PF00385 IPR000953
GO:0000785
GO:0003682
GO:0005634
GO:0006333
LCP FUSION
WD40 WD domain, G-beta repeat PF00400 IPR019781
LCP RDFF
MutS_V MutS domain V PF00488 IPR000432
GO:0005524
GO:0006298
GO:0030983
LCP RDFF
HMG_box HMG (high mobility group) box PF00505 IPR000910
GO:0003677
GO:0005634
LCP RDFF
ZZ Zinc finger, ZZ type PF00569 IPR000433
GO:0008270
LCP FUSION
RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 PF00623 IPR000722
GO:0003677
GO:0003899
GO:0006350
LCP RDFF
EFG_C Elongation factor G C-terminus PF00679 IPR000640
GO:0005525
LCP RDFF
Hydrolase haloacid dehalogenase-like hydrolase PF00702 IPR005834
GO:0003824
GO:0008152
LCP PE
SET SET domain PF00856 IPR001214
LCP PE
IF-2B Initiation factor 2 subunit family PF01008 IPR000649
GO:0044237
LCP RDFF
Dynamin_M Dynamin central region PF01031 IPR000375
GO:0005525
LCP RDFF
G10 G10 protein PF01125 IPR001748
GO:0005634
LCP RDFF
LSM LSM domain PF01423 IPR001163
LCP PE
MutS_I MutS domain I PF01624 IPR007695
GO:0005524
GO:0006298
GO:0030983
LCP RDFF
NTP_transf_2 Nucleotidyltransferase domain PF01909 IPR002934
GO:0016779
LCP RDFF
SIR2 Sir2 family PF02146 IPR003000
GO:0006342
GO:0006476
GO:0008270
GO:0016811
GO:0045449
GO:0070403
LCP RDFF
HAT HAT (Half-A-TPR) repeat PF02184 IPR003107
GO:0005622
GO:0006396
LCP RDFF
GED Dynamin GTPase effector domain PF02212 IPR003130
GO:0003924
GO:0005525
LCP RDFF
PAH Paired amphipathic helix repeat PF02671 IPR003822
GO:0005634
GO:0006355
LCP RDFF
CDC45 CDC45-like protein PF02724 IPR003874
GO:0006270
LCP INSITE
AIRS_C AIR synthase related protein, C-terminal domain PF02769 IPR010918
LCP RDFF
GARS_C Phosphoribosylglycinamide synthetase, C domain PF02843 IPR020560
GO:0004637
GO:0009113
LCP RDFF
GARS_N Phosphoribosylglycinamide synthetase, N domain PF02844 IPR020562
GO:0004637
GO:0009113
LCP RDFF
zf-BED BED zinc finger PF02892 IPR003656
GO:0003677
LCP RDFF
TFIID_20kDa Transcription initiation factor TFIID subunit A PF03847 IPR003228
GO:0005669
GO:0006352
GO:0016986
LCP RDFF
DUF348 Domain of unknown function (DUF348) PF03990 IPR007137
LCP FUSION
HA2 Helicase associated domain (HA2) PF04408 IPR007502
GO:0004386
LCP GPE
DSS1_SEM1 DSS1/SEM1 family PF05160 IPR007834
LCP INSITE
Pkinase_Tyr Protein tyrosine kinase PF07714 IPR001245
GO:0004672
GO:0005524
GO:0006468
LCP KGIDDI




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