Pfam ID |
Description |
Accession |
Interpro ID |
GO ID |
Notes |
Source |
MutS_V |
MutS domain V |
PF00488 |
IPR000432 |
|
 |
|
MutS_II |
MutS domain II |
PF05188 |
IPR007860 |
|
 |
|
MutS_III |
MutS domain III |
PF05192 |
IPR007696 |
|
 |
|
DNA_mis_repair |
DNA mismatch repair protein, C-terminal domain |
PF01119 |
IPR013507 |
|
 |
|
MutS_I |
MutS domain I |
PF01624 |
IPR007695 |
|
 |
|
MutS_IV |
MutS family domain IV |
PF05190 |
IPR007861 |
|
 |
|
Helicase_C |
Helicase conserved C-terminal domain |
PF00271 |
IPR001650 |
|
 |
|
tRNA_anti |
OB-fold nucleic acid binding domain |
PF01336 |
IPR004365 |
|
 |
|
HATPase_c |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
PF02518 |
IPR003594 |
|
 |
|
dsrm |
Double-stranded RNA binding motif |
PF00035 |
IPR001159 |
|
 |
|
efhand |
EF hand |
PF00036 |
IPR018248 |
|
 |
|
Pkinase |
Protein kinase domain |
PF00069 |
IPR017442 |
|
 |
|
RRM_1 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
PF00076 |
IPR000504 |
|
 |
|
ketoacyl-synt |
Beta-ketoacyl synthase, N-terminal domain |
PF00109 |
IPR014030 |
|
 |
|
Ribosomal_S4 |
Ribosomal protein S4/S9 N-terminal domain |
PF00163 |
IPR001912 |
|
 |
|
Cpn10 |
Chaperonin 10 Kd subunit |
PF00166 |
IPR020818 |
|
 |
|
Aldedh |
Aldehyde dehydrogenase family |
PF00171 |
IPR015590 |
|
 |
|
HSP90 |
Hsp90 protein |
PF00183 |
IPR020576 |
|
 |
|
Aminotran_3 |
Aminotransferase class-III |
PF00202 |
IPR005814 |
|
 |
|
Myb_DNA-binding |
Myb-like DNA-binding domain |
PF00249 |
IPR014778 |
|
 |
|
Ribosomal_L16 |
Ribosomal protein L16p/L10e |
PF00252 |
IPR016180 |
|
 |
|
DEAD |
DEAD/DEAH box helicase |
PF00270 |
IPR011545 |
|
 |
|
Dynamin_N |
Dynamin family |
PF00350 |
IPR001401 |
|
 |
|
PI3_PI4_kinase |
Phosphatidylinositol 3- and 4-kinase |
PF00454 |
IPR000403 |
|
 |
|
KOW |
KOW motif |
PF00467 |
IPR005824 |
|
 |
|
RF-1 |
RF-1 domain |
PF00472 |
IPR000352 |
|
 |
|
DNA_pol_A |
DNA polymerase family A |
PF00476 |
IPR001098 |
|
 |
|
BRCT |
BRCA1 C Terminus (BRCT) domain |
PF00533 |
IPR001357 |
|
 |
|
Ribosomal_L12 |
Ribosomal protein L7/L12 C-terminal domain |
PF00542 |
IPR013823 |
|
 |
|
PP-binding |
Phosphopantetheine attachment site |
PF00550 |
IPR006163 |
|
 |
|
ZZ |
Zinc finger, ZZ type |
PF00569 |
IPR000433 |
|
 |
|
CLP_protease |
Clp protease |
PF00574 |
IPR001907 |
|
 |
|
Peptidase_M16 |
Insulinase (Peptidase family M16) |
PF00675 |
IPR011765 |
|
 |
|
DNA_pol3_beta |
DNA polymerase III beta subunit, N-terminal domain |
PF00712 |
IPR022634 |
|
 |
|
Septin |
Septin |
PF00735 |
IPR000038 |
|
 |
|
PseudoU_synth_2 |
RNA pseudouridylate synthase |
PF00849 |
IPR006145 |
|
 |
|
Hist_deacetyl |
Histone deacetylase domain |
PF00850 |
IPR000286 |
|
 |
|
PWWP |
PWWP domain |
PF00855 |
IPR000313 |
|
 |
|
Transpeptidase |
Penicillin binding protein transpeptidase domain |
PF00905 |
IPR001460 |
|
 |
|
Ribosomal_L27 |
Ribosomal L27 protein |
PF01016 |
IPR001684 |
|
 |
|
Dynamin_M |
Dynamin central region |
PF01031 |
IPR000375 |
|
 |
|
FTSW_RODA_SPOVE |
Cell cycle protein |
PF01098 |
IPR001182 |
|
 |
|
CoaE |
Dephospho-CoA kinase |
PF01121 |
IPR001977 |
|
 |
|
Pept_tRNA_hydro |
Peptidyl-tRNA hydrolase |
PF01195 |
IPR001328 |
|
 |
|
Dus |
Dihydrouridine synthase (Dus) |
PF01207 |
IPR001269 |
|
 |
|
XPA_N |
XPA protein N-terminal |
PF01286 |
|
|
 |
|
Ribosomal_L15 |
Ribosomal protein L15 amino terminal region |
PF01305 |
|
|
 |
|
LysM |
LysM domain |
PF01476 |
IPR018392 |
|
 |
|
Smr |
Smr domain |
PF01713 |
IPR002625 |
|
 |
|
IPPT |
IPP transferase |
PF01715 |
IPR002627 |
|
 |
|
PolyA_pol |
Poly A polymerase head domain |
PF01743 |
IPR002646 |
|
 |
|
RRF |
Ribosome recycling factor |
PF01765 |
IPR002661 |
|
 |
|
HNH |
HNH endonuclease |
PF01844 |
IPR002711 |
|
 |
|
60KD_IMP |
60Kd inner membrane protein |
PF02096 |
IPR001708 |
|
 |
|
GED |
Dynamin GTPase effector domain |
PF02212 |
IPR003130 |
|
 |
|
FAT |
FAT domain |
PF02259 |
IPR003151 |
|
 |
|
FATC |
FATC domain |
PF02260 |
IPR003152 |
|
 |
|
Ketoacyl-synt_C |
Beta-ketoacyl synthase, C-terminal domain |
PF02801 |
IPR014031 |
|
 |
|
MurB_C |
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain |
PF02873 |
IPR011601 |
|
 |
|
Glyco_transf_28 |
Glycosyltransferase family 28 N-terminal domain |
PF03033 |
IPR004276 |
|
 |
|
FDX-ACB |
Ferredoxin-fold anticodon binding domain |
PF03147 |
IPR005121 |
|
 |
|
PCRF |
PCRF domain |
PF03462 |
IPR005139 |
|
 |
|
Rad50_zn_hook |
Rad50 zinc hook motif |
PF04423 |
IPR007517 |
|
 |
|