Pfam ID
Description
Accession
Interpro ID
GO ID
Cyclin_N
Cyclin, N-terminal domain
PF00134
IPR006671
Cyclin_N
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Cyclin_N
Cyclin, N-terminal domain
PF00134
IPR006671
Tat
Transactivating regulatory protein (Tat)
PF00539
IPR001831
GO:0003700
GO:0006355
GO:0042025
CDI
Cyclin-dependent kinase inhibitor
PF02234
IPR003175
GO:0004861
GO:0005634
GO:0007050
Cyclin_C
Cyclin, C-terminal domain
PF02984
IPR004367
GO:0005634
Rb_C
Rb C-terminal domain
PF08934
IPR015030
K-cyclin_vir_C
K cyclin, C terminal
PF09080
IPR015164
Herp-Cyclin
Herpesviridae viral cyclin
PF09241
IPR015322
F-box
F-box domain
PF00646
IPR001810
E2F_TDP
E2F/DP family winged-helix DNA-binding domain
PF02319
IPR003316
GO:0003700
GO:0005667
GO:0006355
CDC37_N
Cdc37 N terminal kinase binding
PF03234
IPR013855
MinC_C
Septum formation inhibitor MinC, C-terminal domain
PF03775
IPR005526
HSP70
Hsp70 protein
PF00012
IPR013126
Ank
Ankyrin repeat
PF00023
IPR002110
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
AA_permease
Amino acid permease
PF00324
IPR004841
GO:0006810
GO:0016020
GO:0055085
WD40
WD domain, G-beta repeat
PF00400
IPR019781
Bromodomain
Bromodomain
PF00439
IPR001487
CKS
Cyclin-dependent kinase regulatory subunit
PF01111
IPR000789
GO:0007049
GO:0016538
eIF-6
eIF-6 family
PF01912
IPR002769
GO:0042256
GO:0043022
GTP_EFTU_D3
Elongation factor Tu C-terminal domain
PF03143
IPR004160
GO:0005525
GTP_EFTU_D2
Elongation factor Tu domain 2
PF03144
IPR004161
GO:0005525
GTP_EFTU
Elongation factor Tu GTP binding domain
PF00009
IPR000795
GO:0003924
GO:0005525
HSP20
Hsp20/alpha crystallin family
PF00011
IPR002068
Homeobox
Homeobox domain
PF00046
IPR001356
GO:0003700
GO:0006355
GO:0043565
Hormone_recep
Ligand-binding domain of nuclear hormone receptor
PF00104
IPR000536
GO:0003700
GO:0003707
GO:0005634
GO:0006355
Zn_clus
Fungal Zn(2)-Cys(6) binuclear cluster domain
PF00172
IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
ATP-synt
ATP synthase
PF00231
IPR000131
GO:0015986
GO:0045261
GO:0046933
GO:0046961
ubiquitin
Ubiquitin family
PF00240
IPR000626
FKBP_C
FKBP-type peptidyl-prolyl cis-trans isomerase
PF00254
IPR001179
GO:0006457
DEAD
DEAD/DEAH box helicase
PF00270
IPR011545
GO:0003676
GO:0005524
GO:0008026
Pkinase_C
Protein kinase C terminal domain
PF00433
IPR017892
GO:0004674
GO:0005524
GO:0006468
Spectrin
Spectrin repeat
PF00435
IPR002017
HSF_DNA-bind
HSF-type DNA-binding
PF00447
IPR000232
GO:0003700
GO:0005634
GO:0006355
GO:0043565
TPR_1
Tetratricopeptide repeat
PF00515
IPR001440
Rhodanese
Rhodanese-like domain
PF00581
IPR001763
RasGAP
GTPase-activator protein for Ras-like GTPase
PF00616
IPR001936
GO:0005096
GO:0005622
GO:0051056
RasGEF_N
Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
PF00618
IPR000651
GO:0005085
GO:0005622
GO:0051056
Peptidase_M16
Insulinase (Peptidase family M16)
PF00675
IPR011765
GO:0004222
GO:0006508
DnaJ_CXXCXGXG
DnaJ central domain (4 repeats)
PF00684
IPR001305
GO:0006457
GO:0031072
GO:0051082
PBD
P21-Rho-binding domain
PF00786
IPR000095
PUF
Pumilio-family RNA binding repeat
PF00806
IPR001313
GO:0003723
Cullin
Cullin family
PF00888
IPR001373
GO:0006511
GO:0031461
GO:0031625
CbiA
CobQ/CobB/MinD/ParA nucleotide binding domain
PF01656
IPR002586
SCO1-SenC
SCO1/SenC
PF02630
IPR003782
NOT2_3_5
NOT2 / NOT3 / NOT5 family
PF04153
IPR007282
GO:0005634
GO:0030528
GO:0045449
MAT1
CDK-activating kinase assembly factor MAT1
PF06391
IPR015877
GO:0005634
GO:0007049
P19Arf_N
Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus
PF07392
IPR010868
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Copyright © 2007, Raghavachari et al.
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