Pfam ID Description Accession Interpro ID GO ID
TPR_1 Tetratricopeptide repeat PF00515 IPR001440



TPR_1 forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
Ras Ras family PF00071 IPR013753
PDB IPFAM
Metallophos Calcineurin-like phosphoesterase PF00149 IPR004843
GO:0016787
 PDB IPFAM 3DID RCDP PVALUE FUSION DOMAINGA
HSP90 Hsp90 protein PF00183 IPR020576
PDB IPFAM ME PVALUE RDFF INSITE
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase PF00254 IPR001179
GO:0006457
 PDB IPFAM ME FUSION
TPR_1 Tetratricopeptide repeat PF00515 IPR001440
PDB IPFAM 3DID PVALUE PE RDFF DOMAINGA
U-box U-box domain PF04564 IPR003613
GO:0000151
GO:0004842
GO:0016567
 PDB IPFAM
TPR_2 Tetratricopeptide repeat PF07719 IPR013105
PDB 3DID
PPP5 PPP5 PF08321 IPR013235
GO:0004722
GO:0046872
 PDB IPFAM 3DID
APC_CDC26 Anaphase-promoting complex APC subunit PF10471 IPR018860
PDB 3DID
Ank Ankyrin repeat PF00023 IPR002110
HCP ME
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
 HCP ME RCDP RDFF DOMAINGA
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
GO:0005622
GO:0008270
 HCP ME FUSION RDFF INSITE
DnaJ DnaJ domain PF00226 IPR001623
GO:0031072
 HCP FUSION RDFF DOMAINGA
WD40 WD domain, G-beta repeat PF00400 IPR019781
HCP ME RDFF DOMAINGA
CN_hydrolase Carbon-nitrogen hydrolase PF00795 IPR003010
GO:0006807
GO:0016810
 HCP DIPD RDFF DOMAINGA
Hist_deacetyl Histone deacetylase domain PF00850 IPR000286
HCP RCDP PVALUE DIPD
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 IPR003594
GO:0005524
 HCP PVALUE RDFF INSITE
APC10 Anaphase-promoting complex, subunit 10 (APC10) PF03256 IPR004939
GO:0005515
GO:0005680
GO:0030071
 HCP PE INSITE DOMAINGA
HSP70 Hsp70 protein PF00012 IPR013126
MCP PE RDFF
KH_1 KH domain PF00013 IPR018111
GO:0003723
 MCP PE RDFF
SH3_1 SH3 domain PF00018 IPR001452
MCP FUSION DOMAINGA
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase PF00070 IPR001327
GO:0016491
GO:0050660
GO:0055114
 MCP PE RDFF
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
MCP FUSION DOMAINGA
Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF00160 IPR002130
GO:0003755
GO:0006457
 MCP FUSION PE
Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain PF00172 IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
 MCP RDFF DOMAINGA
14-3-3 14-3-3 protein PF00244 IPR000308
GO:0019904
 MCP DPEA PE DIPD
Aldo_ket_red Aldo/keto reductase family PF00248 IPR001395
GO:0016491
GO:0055114
 MCP PE RDFF
GSHPx Glutathione peroxidase PF00255 IPR000889
GO:0004602
GO:0006979
GO:0055114
 MCP PVALUE DIPD
Biotin_lipoyl Biotin-requiring enzyme PF00364 IPR000089
MCP RDFF DOMAINGA
WW WW domain PF00397 IPR001202
GO:0005515
 MCP PE RDFF
Rotamase PPIC-type PPIASE domain PF00639 IPR000297
GO:0016853
 MCP RCDP DIPD RDFF
E3_binding e3 binding domain PF02817 IPR004167
GO:0005515
GO:0008152
GO:0008415
 MCP PVALUE RDFF
Sec62 Translocation protein Sec62 PF03839 IPR004728
GO:0008565
GO:0015031
GO:0016021
 MCP DPEA PE INSITE
Coatomer_WDAD Coatomer WD associated region PF04053 IPR006692
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030117
 MCP RCDP DIPD
AAA ATPase family associated with various cellular activities (AAA) PF00004 IPR003959
GO:0005524
 LCP RDFF
ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain PF00006 IPR000194
GO:0005524
 LCP RDFF
Asp Eukaryotic aspartyl protease PF00026 IPR001461
GO:0004190
GO:0006508
 LCP RDFF
Globin Globin PF00042 IPR000971
GO:0005506
GO:0020037
 LCP RDFF
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
 LCP RDFF
ADH_zinc_N Zinc-binding dehydrogenase PF00107 IPR013149
GO:0008270
GO:0016491
GO:0055114
 LCP PE
Peptidase_C1 Papain family cysteine protease PF00112 IPR000668
GO:0006508
GO:0008234
 LCP PE
tRNA-synt_1 tRNA synthetases class I (I, L, M and V) PF00133 IPR002300
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
 LCP RDFF
Cyclin_N Cyclin, N-terminal domain PF00134 IPR006671
LCP RDFF
tRNA-synt_2 tRNA synthetases class II (D, K and N) PF00152 IPR004364
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
 LCP RDFF
NAD_binding_1 Oxidoreductase NAD-binding domain PF00175 IPR001433
GO:0016491
GO:0055114
 LCP RDFF
UQ_con Ubiquitin-conjugating enzyme PF00179 IPR000608
GO:0019787
GO:0043687
GO:0051246
 LCP DOMAINGA
Aminotran_3 Aminotransferase class-III PF00202 IPR005814
GO:0008483
GO:0030170
 LCP PE
Lyase_1 Lyase PF00206 IPR022761
LCP PE
MIP Major intrinsic protein PF00230 IPR000425
GO:0005215
GO:0006810
GO:0016020
 LCP PE
Calreticulin Calreticulin family PF00262 IPR001580
GO:0005509
 LCP PE
DEAD DEAD/DEAH box helicase PF00270 IPR011545
GO:0003676
GO:0005524
GO:0008026
 LCP RDFF
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
 LCP RDFF
Ribosomal_L23 Ribosomal protein L23 PF00276 IPR013025
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
PALP Pyridoxal-phosphate dependent enzyme PF00291 IPR001926
GO:0003824
GO:0008152
GO:0030170
 LCP RDFF
PGAM Phosphoglycerate mutase family PF00300 IPR013078
LCP RDFF
ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain PF00306 IPR000793
GO:0015986
GO:0016820
GO:0033178
 LCP RDFF
GATase_2 Glutamine amidotransferases class-II PF00310 IPR000583
GO:0008152
 LCP RDFF
Tetraspannin Tetraspanin family PF00335 IPR018499
GO:0016021
 LCP PE
Ribosomal_S10 Ribosomal protein S10p/S20e PF00338 IPR001848
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP PE
Chitin_bind_4 Insect cuticle protein PF00379 IPR000618
GO:0042302
 LCP DPEA PE
PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain PF00408 IPR005843
GO:0005975
GO:0016868
 LCP RDFF
HSF_DNA-bind HSF-type DNA-binding PF00447 IPR000232
GO:0003700
GO:0005634
GO:0006355
GO:0043565
 LCP INSITE
SRP54 SRP54-type protein, GTPase domain PF00448 IPR000897
GO:0005525
GO:0006614
 LCP FUSION
PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase PF00454 IPR000403
GO:0016773
 LCP RDFF
KOW KOW motif PF00467 IPR005824
LCP PE
Trans_reg_C Transcriptional regulatory protein, C terminal PF00486 IPR001867
GO:0000156
GO:0000160
GO:0003677
GO:0006355
 LCP FUSION
AMP-binding AMP-binding enzyme PF00501 IPR000873
GO:0003824
GO:0008152
 LCP RDFF
Arm Armadillo/beta-catenin-like repeat PF00514 IPR000225
LCP PE
Glycos_transf_2 Glycosyl transferase family 2 PF00535 IPR001173
LCP FUSION
LRR_1 Leucine Rich Repeat PF00560 IPR001611
GO:0005515
 LCP RDFF
PB1 PB1 domain PF00564 IPR000270
LCP FUSION
IQ IQ calmodulin-binding motif PF00612 IPR000048
LCP PE
RasGEF RasGEF domain PF00617 IPR001895
GO:0005085
GO:0005622
GO:0007264
 LCP PE
RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 PF00623 IPR000722
GO:0003677
GO:0003899
GO:0006350
 LCP RDFF
PHD PHD-finger PF00628 IPR019787
LCP RDFF
Ran_BP1 RanBP1 domain PF00638 IPR000156
GO:0046907
 LCP FUSION
zf-RanBP Zn-finger in Ran binding protein and others PF00641 IPR001876
GO:0005622
GO:0008270
 LCP FUSION
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) PF00642 IPR000571
GO:0003676
GO:0008270
 LCP FUSION
F-box F-box domain PF00646 IPR001810
LCP RDFF
Copper-fist Copper fist DNA binding domain PF00649 IPR001083
GO:0003677
GO:0003700
GO:0005507
GO:0005634
GO:0006355
 LCP RDFF
Sulfotransfer_1 Sulfotransferase domain PF00685 IPR000863
GO:0008146
 LCP FUSION
Septin Septin PF00735 IPR000038
GO:0005525
GO:0007049
 LCP RDFF
Carn_acyltransf Choline/Carnitine o-acyltransferase PF00755 IPR000542
GO:0008415
 LCP PE
Ferrochelatase Ferrochelatase PF00762 IPR001015
GO:0004325
GO:0006783
 LCP DIPD
PUF Pumilio-family RNA binding repeat PF00806 IPR001313
GO:0003723
 LCP PVALUE
TCTP Translationally controlled tumour protein PF00838 IPR018105
LCP DPEA PE
Cullin Cullin family PF00888 IPR001373
GO:0006511
GO:0031461
GO:0031625
 LCP PVALUE
NB-ARC NB-ARC domain PF00931 IPR002182
GO:0005524
GO:0006915
 LCP FUSION
FAD_binding_6 Oxidoreductase FAD-binding domain PF00970 IPR008333
GO:0016491
GO:0055114
 LCP RDFF
Sec1 Sec1 family PF00995 IPR001619
GO:0006904
GO:0016192
 LCP PE
Bac_rhodopsin Bacteriorhodopsin PF01036 IPR001425
GO:0005216
GO:0006811
GO:0016020
 LCP INSITE
F_actin_cap_B F-actin capping protein, beta subunit PF01115 IPR001698
GO:0003779
GO:0005737
GO:0008290
GO:0030036
 LCP DPEA PE
RNase_PH 3' exoribonuclease family, domain 1 PF01138 IPR001247
GO:0000175
GO:0003723
GO:0006396
 LCP RDFF
CK_II_beta Casein kinase II regulatory subunit PF01214 IPR000704
GO:0005956
GO:0019887
 LCP RDFF
eIF-5a Eukaryotic initiation factor 5A hypusine, DNA-binding OB fold PF01287 IPR020189
GO:0003723
GO:0003746
GO:0006452
GO:0043022
GO:0045901
GO:0045905
 LCP RDFF
tRNA_anti OB-fold nucleic acid binding domain PF01336 IPR004365
GO:0003676
 LCP RDFF
SIS SIS domain PF01380 IPR001347
GO:0005529
GO:0005975
 LCP RDFF
Mov34 Mov34/MPN/PAD-1 family PF01398 IPR000555
LCP RDFF
PCI PCI domain PF01399 IPR000717
LCP DOMAINGA
tRNA-synt_2c tRNA synthetases class II (A) PF01411 IPR018164
GO:0000166
GO:0004813
GO:0005524
GO:0005737
GO:0006412
GO:0006419
 LCP RDFF
LSM LSM domain PF01423 IPR001163
LCP RDFF
Peptidase_M1 Peptidase family M1 PF01433 IPR014782
GO:0008237
GO:0008270
 LCP RDFF
CBM_14 Chitin binding Peritrophin-A domain PF01607 IPR002557
GO:0005576
GO:0006030
GO:0008061
 LCP PE
Rhomboid Rhomboid family PF01694
GO:0004252
GO:0016021
 LCP FUSION
CheR CheR methyltransferase, SAM binding domain PF01739 IPR022642
LCP FUSION
ACOX Acyl-CoA oxidase PF01756 IPR002655
GO:0003997
GO:0005777
GO:0006635
GO:0055114
 LCP RDFF
Nop Putative snoRNA binding domain PF01798 IPR002687
LCP RDFF
AICARFT_IMPCHas AICARFT/IMPCHase bienzyme PF01808 IPR013982
GO:0003824
GO:0006188
 LCP RDFF
NAC NAC domain PF01849 IPR002715
LCP PE
PTH2 Peptidyl-tRNA hydrolase PTH2 PF01981 IPR002833
GO:0004045
GO:0006412
 LCP DPEA PE
MAS20 MAS20 protein import receptor PF02064 IPR002056
GO:0005742
GO:0006605
GO:0006886
 LCP DOMAINGA
NSF Aromatic-di-Alanine (AdAR) repeat PF02071 IPR000744
GO:0005783
GO:0005794
GO:0006886
 LCP DOMAINGA
AT_hook AT hook motif PF02178 IPR017956
GO:0003677
 LCP PE
GoLoco GoLoco motif PF02188 IPR003109
GO:0005096
GO:0007165
 LCP FUSION
FAT FAT domain PF02259 IPR003151
LCP RDFF
FATC FATC domain PF02260 IPR003152
LCP RDFF
DHHA1 DHHA1 domain PF02272 IPR003156
GO:0003676
 LCP RDFF
JmjC JmjC domain PF02373 IPR013129
LCP FUSION
NAD_synthase NAD synthase PF02540 IPR022310
LCP RCDP
ERCC4 ERCC4 domain PF02732 IPR006166
GO:0003677
GO:0004518
GO:0005515
GO:0006259
 LCP RDFF
Thiolase_C Thiolase, C-terminal domain PF02803 IPR020617
GO:0008152
GO:0016747
 LCP RDFF
TGS TGS domain PF02824 IPR004095
LCP PE
ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain PF02874 IPR004100
GO:0015992
GO:0016469
GO:0046034
GO:0046933
GO:0046961
 LCP RDFF
PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF02878 IPR005844
GO:0005975
GO:0016868
 LCP RDFF
PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF02879 IPR005845
GO:0005975
GO:0016868
 LCP RDFF
PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF02880 IPR005846
GO:0005975
GO:0016868
 LCP RDFF
SRP54_N SRP54-type protein, helical bundle domain PF02881 IPR013822
GO:0005515
GO:0005525
GO:0006614
 LCP FUSION
Sec63 Sec63 Brl domain PF02889 IPR004179
LCP RDFF
Cyclin_C Cyclin, C-terminal domain PF02984 IPR004367
GO:0005634
 LCP RDFF
BAR BAR domain PF03114 IPR004148
GO:0005515
GO:0005737
 LCP INSITE
V-ATPase_G Vacuolar (H+)-ATPase G subunit PF03179 IPR005124
GO:0015992
GO:0016471
GO:0016820
 LCP DIPD
CheR_N CheR methyltransferase, all-alpha domain PF03705 IPR022641
LCP FUSION
SWIM SWIM zinc finger PF04434 IPR007527
GO:0008270
 LCP DPEA PE
MED6 MED6 mediator sub complex component PF04934 IPR007018
GO:0006357
GO:0016455
GO:0016592
 LCP DPEA PE
CS CS domain PF04969 IPR017447
LCP FUSION
SGS SGS domain PF05002 IPR007699
LCP FUSION
Serendipity_A Serendipity locus alpha protein (SRY-A) PF05482 IPR008837
GO:0005737
GO:0007349
GO:0016020
 LCP DPEA PE
TIP49 TIP49 C-terminus PF06068 IPR010339
GO:0003678
GO:0005524
 LCP INSITE
PRP1_N PRP1 splicing factor, N-terminal PF06424 IPR010491
GO:0000398
GO:0005634
 LCP FUSION
I-set Immunoglobulin I-set domain PF07679 IPR013098
LCP PE
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase PF07992 IPR013027
LCP RCDP



Terms of use
Copyright © 2007, Raghavachari et al.
Comments or questions on the site? Send an email to jothi AT mail.nih.gov