Pfam ID |
Description |
Accession |
Interpro ID |
GO ID |
Notes |
Source |
Cys_knot |
Cystine-knot domain |
PF00007 |
IPR006208 |
|
 |
|
Cadherin |
Cadherin domain |
PF00028 |
IPR002126 |
|
 |
|
Lys |
C-type lysozyme/alpha-lactalbumin family |
PF00062 |
IPR001916 |
|
 |
|
Ras |
Ras family |
PF00071 |
IPR013753 |
|
 |
|
RnaseA |
Pancreatic ribonuclease |
PF00074 |
IPR001427 |
|
 |
|
RRM_1 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
PF00076 |
IPR000504 |
|
 |
|
Trypsin |
Trypsin |
PF00089 |
IPR001254 |
|
 |
|
VWA |
von Willebrand factor type A domain |
PF00092 |
IPR002035 |
|
 |
|
Hormone_6 |
Glycoprotein hormone |
PF00236 |
IPR000476 |
|
 |
|
Prenyltrans |
Prenyltransferase and squalene oxidase repeat |
PF00432 |
IPR001330 |
|
 |
|
LRR_1 |
Leucine Rich Repeat |
PF00560 |
IPR001611 |
|
 |
|
LRRNT |
Leucine rich repeat N-terminal domain |
PF01462 |
IPR000372 |
|
 |
|
TIG |
IPT/TIG domain |
PF01833 |
IPR002909 |
|
 |
|
E1_DerP2_DerF2 |
ML domain |
PF02221 |
IPR003172 |
|
 |
|
Skp1_POZ |
Skp1 family, tetramerisation domain |
PF03931 |
IPR016073 |
|
 |
|
RabGGT_insert |
Rab geranylgeranyl transferase alpha-subunit, insert domain |
PF07711 |
IPR009087 |
|
 |
|
LRR_adjacent |
LRR adjacent |
PF08191 |
IPR012569 |
|
 |
|
LRRNT_2 |
Leucine rich repeat N-terminal domain |
PF08263 |
IPR013210 |
|
 |
|
Tap-RNA_bind |
Tap, RNA-binding |
PF09162 |
|
|
 |
|
7tm_1 |
7 transmembrane receptor (rhodopsin family) |
PF00001 |
IPR000276 |
|
 |
|
EGF |
EGF-like domain |
PF00008 |
IPR006209 |
|
 |
|
fn3 |
Fibronectin type III domain |
PF00041 |
IPR003961 |
|
 |
|
ig |
Immunoglobulin domain |
PF00047 |
IPR013151 |
|
 |
|
Pkinase |
Protein kinase domain |
PF00069 |
IPR017442 |
|
 |
|
zf-C3HC4 |
Zinc finger, C3HC4 type (RING finger) |
PF00097 |
IPR018957 |
|
 |
|
PDZ |
PDZ domain (Also known as DHR or GLGF) |
PF00595 |
IPR001478 |
|
 |
|
Guanylate_kin |
Guanylate kinase |
PF00625 |
IPR008144 |
|
 |
|
F-box |
F-box domain |
PF00646 |
IPR001810 |
|
 |
|
TIR |
TIR domain |
PF01582 |
IPR000157 |
|
 |
|
Cofilin_ADF |
Cofilin/tropomyosin-type actin-binding protein |
PF00241 |
IPR002108 |
|
 |
|
CBS |
CBS domain pair |
PF00571 |
IPR000644 |
|
 |
|
ABC_tran |
ABC transporter |
PF00005 |
IPR003439 |
|
 |
|
SH3_1 |
SH3 domain |
PF00018 |
IPR001452 |
|
 |
|
Actin |
Actin |
PF00022 |
IPR004000 |
|
 |
|
Ank |
Ankyrin repeat |
PF00023 |
IPR002110 |
|
 |
|
Arf |
ADP-ribosylation factor family |
PF00025 |
IPR006689 |
|
 |
|
Laminin_G_1 |
Laminin G domain |
PF00054 |
IPR012679 |
|
 |
|
Ldl_recept_a |
Low-density lipoprotein receptor domain class A |
PF00057 |
|
|
 |
|
Lectin_C |
Lectin C-type domain |
PF00059 |
IPR001304 |
|
 |
|
Tubulin |
Tubulin/FtsZ family, GTPase domain |
PF00091 |
IPR003008 |
|
 |
|
VWC |
von Willebrand factor type C domain |
PF00093 |
IPR001007 |
|
 |
|
zf-C2H2 |
Zinc finger, C2H2 type |
PF00096 |
IPR007087 |
|
 |
|
Cpn60_TCP1 |
TCP-1/cpn60 chaperonin family |
PF00118 |
IPR002423 |
|
 |
|
E1-E2_ATPase |
E1-E2 ATPase |
PF00122 |
IPR008250 |
|
 |
|
Histone |
Core histone H2A/H2B/H3/H4 |
PF00125 |
IPR007125 |
|
 |
|
Hexapep |
Bacterial transferase hexapeptide (three repeats) |
PF00132 |
IPR001451 |
|
 |
|
Pro_isomerase |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
PF00160 |
IPR002130 |
|
 |
|
TPP_enzyme_M |
Thiamine pyrophosphate enzyme, central domain |
PF00205 |
IPR012000 |
|
 |
|
Guanylate_cyc |
Adenylate and Guanylate cyclase catalytic domain |
PF00211 |
IPR001054 |
|
 |
|
ubiquitin |
Ubiquitin family |
PF00240 |
IPR000626 |
|
 |
|
Ribosomal_L16 |
Ribosomal protein L16p/L10e |
PF00252 |
IPR016180 |
|
 |
|
PALP |
Pyridoxal-phosphate dependent enzyme |
PF00291 |
IPR001926 |
|
 |
|
CH |
Calponin homology (CH) domain |
PF00307 |
IPR001715 |
|
 |
|
WD40 |
WD domain, G-beta repeat |
PF00400 |
IPR019781 |
|
 |
|
PP2C |
Protein phosphatase 2C |
PF00481 |
IPR014045 |
|
 |
|
TPR_1 |
Tetratricopeptide repeat |
PF00515 |
IPR001440 |
|
 |
|
FCH |
Fes/CIP4 homology domain |
PF00611 |
IPR001060 |
|
 |
|
IQ |
IQ calmodulin-binding motif |
PF00612 |
IPR000048 |
|
 |
|
RasGAP |
GTPase-activator protein for Ras-like GTPase |
PF00616 |
IPR001936 |
|
 |
|
Gelsolin |
Gelsolin repeat |
PF00626 |
IPR007123 |
|
 |
|
Cation_ATPase_N |
Cation transporter/ATPase, N-terminus |
PF00690 |
IPR004014 |
|
 |
|
Hydrolase |
haloacid dehalogenase-like hydrolase |
PF00702 |
IPR005834 |
|
 |
|
Carn_acyltransf |
Choline/Carnitine o-acyltransferase |
PF00755 |
IPR000542 |
|
 |
|
RA |
Ras association (RalGDS/AF-6) domain |
PF00788 |
IPR000159 |
|
 |
|
PKD |
PKD domain |
PF00801 |
IPR000601 |
|
 |
|
Adap_comp_sub |
Adaptor complexes medium subunit family |
PF00928 |
IPR008968 |
|
 |
|
NB-ARC |
NB-ARC domain |
PF00931 |
IPR002182 |
|
 |
|
Cys_Met_Meta_PP |
Cys/Met metabolism PLP-dependent enzyme |
PF01053 |
IPR000277 |
|
 |
|
Ubie_methyltran |
ubiE/COQ5 methyltransferase family |
PF01209 |
IPR004033 |
|
 |
|
Dynein_light |
Dynein light chain type 1 |
PF01221 |
IPR001372 |
|
 |
|
PPTA |
Protein prenyltransferase alpha subunit repeat |
PF01239 |
IPR002088 |
|
 |
|
CAP_GLY |
CAP-Gly domain |
PF01302 |
IPR000938 |
|
 |
|
Porin_3 |
Eukaryotic porin |
PF01459 |
IPR001925 |
|
 |
|
LRRCT |
Leucine rich repeat C-terminal domain |
PF01463 |
IPR000483 |
|
 |
|
PLAT |
PLAT/LH2 domain |
PF01477 |
IPR001024 |
|
 |
|
IF4E |
Eukaryotic initiation factor 4E |
PF01652 |
IPR001040 |
|
 |
|
WSC |
WSC domain |
PF01822 |
IPR002889 |
|
 |
|
GPS |
Latrophilin/CL-1-like GPS domain |
PF01825 |
IPR000203 |
|
 |
|
REJ |
REJ domain |
PF02010 |
IPR002859 |
|
 |
|
NTF2 |
Nuclear transport factor 2 (NTF2) domain |
PF02136 |
IPR002075 |
|
 |
|
PAH |
Paired amphipathic helix repeat |
PF02671 |
IPR003822 |
|
 |
|
PAAD_DAPIN |
PAAD/DAPIN/Pyrin domain |
PF02758 |
IPR004020 |
|
 |
|
TPP_enzyme_C |
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain |
PF02775 |
IPR011766 |
|
 |
|
TPP_enzyme_N |
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain |
PF02776 |
IPR012001 |
|
 |
|
WRKY |
WRKY DNA -binding domain |
PF03106 |
IPR003657 |
|
 |
|
Exo_endo_phos |
Endonuclease/Exonuclease/phosphatase family |
PF03372 |
IPR005135 |
|
 |
|
TAP_C |
TAP C-terminal domain |
PF03943 |
IPR005637 |
|
 |
|
Dynamitin |
Dynamitin |
PF04912 |
IPR006996 |
|
 |
|
NACHT |
NACHT domain |
PF05729 |
|
|
 |
|
Mod_r |
Modifier of rudimentary (Mod(r)) protein |
PF07200 |
IPR009851 |
|
 |
|