Pfam ID
Description
Accession
Interpro ID
GO ID
ABC_tran
ABC transporter
PF00005
IPR003439
GO:0005524
GO:0016887
ABC_tran
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
ABC_tran
ABC transporter
PF00005
IPR003439
GO:0005524
GO:0016887
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
PF00528
IPR000515
GO:0005215
GO:0006810
GO:0016020
ABC_membrane
ABC transporter transmembrane region
PF00664
IPR001140
GO:0005524
GO:0006810
GO:0016021
GO:0042626
GO:0055085
FecCD
FecCD transport family
PF01032
IPR000522
GO:0005215
GO:0006810
GO:0016020
UPF0051
Uncharacterized protein family (UPF0051)
PF01458
IPR000825
GO:0005515
GO:0016226
TOBE
TOBE domain
PF03459
IPR005116
GO:0005215
GO:0005524
GO:0006810
GO:0016820
GO:0043190
TOBE_2
TOBE domain
PF08402
IPR013611
GO:0005215
GO:0005524
GO:0006810
GO:0016820
GO:0043190
GTP_EFTU
Elongation factor Tu GTP binding domain
PF00009
IPR000795
GO:0003924
GO:0005525
Fer4
4Fe-4S binding domain
PF00037
IPR001450
GO:0009055
GO:0051536
CBS
CBS domain pair
PF00571
IPR000644
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
eIF-5_eIF-2B
Domain found in IF2B/IF5
PF01873
IPR002735
GO:0003743
GO:0006413
GTP_EFTU_D2
Elongation factor Tu domain 2
PF03144
IPR004161
GO:0005525
EGF
EGF-like domain
PF00008
IPR006209
cNMP_binding
Cyclic nucleotide-binding domain
PF00027
IPR000595
GST_C
Glutathione S-transferase, C-terminal domain
PF00043
IPR004046
Myosin_head
Myosin head (motor domain)
PF00063
IPR001609
GO:0003774
GO:0005524
GO:0016459
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
Peptidase_S8
Subtilase family
PF00082
IPR000209
GO:0004252
GO:0006508
zf-C2H2
Zinc finger, C2H2 type
PF00096
IPR007087
GO:0005622
GO:0008270
Cpn60_TCP1
TCP-1/cpn60 chaperonin family
PF00118
IPR002423
GO:0005515
GO:0005524
GO:0044267
SNF2_N
SNF2 family N-terminal domain
PF00176
IPR000330
GO:0003677
GO:0005524
Aminotran_5
Aminotransferase class-V
PF00266
IPR000192
GO:0008152
DEAD
DEAD/DEAH box helicase
PF00270
IPR011545
GO:0003676
GO:0005524
GO:0008026
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
Pyridoxal_deC
Pyridoxal-dependent decarboxylase conserved domain
PF00282
IPR002129
GO:0016831
GO:0019752
GO:0030170
WD40
WD domain, G-beta repeat
PF00400
IPR019781
HMG_box
HMG (high mobility group) box
PF00505
IPR000910
GO:0003677
GO:0005634
LRR_1
Leucine Rich Repeat
PF00560
IPR001611
GO:0005515
UvrD-helicase
UvrD/REP helicase
PF00580
IPR000212
GO:0003677
GO:0004003
GO:0005524
GO:0006281
PDZ
PDZ domain (Also known as DHR or GLGF)
PF00595
IPR001478
GO:0005515
IQ
IQ calmodulin-binding motif
PF00612
IPR000048
HHH
Helix-hairpin-helix motif
PF00633
IPR000445
GO:0003677
Carn_acyltransf
Choline/Carnitine o-acyltransferase
PF00755
IPR000542
GO:0008415
PUF
Pumilio-family RNA binding repeat
PF00806
IPR001313
GO:0003723
DMRL_synthase
6,7-dimethyl-8-ribityllumazine synthase
PF00885
IPR002180
GO:0009231
GO:0009349
ThiF
ThiF family
PF00899
IPR000594
GO:0003824
Ammonium_transp
Ammonium Transporter Family
PF00909
IPR001905
GO:0006810
GO:0008519
GO:0016020
GO:0055085
Sec7
Sec7 domain
PF01369
IPR000904
GO:0005086
GO:0005622
GO:0032012
LSM
LSM domain
PF01423
IPR001163
DIL
DIL domain
PF01843
IPR018444
W2
eIF4-gamma/eIF5/eIF2-epsilon
PF02020
IPR003307
SIR2
Sir2 family
PF02146
IPR003000
GO:0006342
GO:0006476
GO:0008270
GO:0016811
GO:0045449
GO:0070403
FtsX
Predicted permease
PF02687
IPR003838
GO:0016020
Myosin_N
Myosin N-terminal SH3-like domain
PF02736
IPR004009
GO:0003774
GO:0005524
GO:0016459
GST_N
Glutathione S-transferase, N-terminal domain
PF02798
IPR004045
2-Hacid_dh_C
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PF02826
IPR006140
GO:0016616
GO:0048037
HEAT
HEAT repeat
PF02985
IPR000357
Peptidase_C39
Peptidase C39 family
PF03412
IPR005074
GO:0005524
GO:0006508
GO:0008233
GO:0016021
RLI
Possible metal-binding domain in RNase L inhibitor, RLI
PF04068
IPR007209
SIP
Siderophore-interacting protein
PF04954
IPR007037
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Copyright © 2007, Raghavachari et al.
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