Pfam ID
Description
Accession
Interpro ID
GO ID
FHA
FHA domain
PF00498
IPR000253
FHA
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Trans_reg_C
Transcriptional regulatory protein, C terminal
PF00486
IPR001867
GO:0000156
GO:0000160
GO:0003677
GO:0006355
FHA
FHA domain
PF00498
IPR000253
ArfGap
Putative GTPase activating protein for Arf
PF01412
IPR001164
GO:0008060
GO:0008270
GO:0032312
BTAD
Bacterial transcriptional activator domain
PF03704
IPR005158
Rad9_Rad53_bind
Fungal Rad9-like Rad53-binding
PF08605
IPR013914
PH
PH domain
PF00169
IPR001849
Kinesin
Kinesin motor domain
PF00225
IPR001752
GO:0003777
GO:0005524
GO:0007018
BRCT
BRCA1 C Terminus (BRCT) domain
PF00533
IPR001357
GO:0005622
zf-C2H2
Zinc finger, C2H2 type
PF00096
IPR007087
GO:0005622
GO:0008270
zf-C3HC4
Zinc finger, C3HC4 type (RING finger)
PF00097
IPR018957
Histone
Core histone H2A/H2B/H3/H4
PF00125
IPR007125
GO:0003677
ubiquitin
Ubiquitin family
PF00240
IPR000626
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
polyprenyl_synt
Polyprenyl synthetase
PF00348
IPR000092
GO:0008299
HMG_box
HMG (high mobility group) box
PF00505
IPR000910
GO:0003677
GO:0005634
IF-2B
Initiation factor 2 subunit family
PF01008
IPR000649
GO:0044237
MORN
MORN repeat
PF02493
IPR003409
ERCC4
ERCC4 domain
PF02732
IPR006166
GO:0003677
GO:0004518
GO:0005515
GO:0006259
AAA
ATPase family associated with various cellular activities (AAA)
PF00004
IPR003959
GO:0005524
dsrm
Double-stranded RNA binding motif
PF00035
IPR001159
GO:0003725
GO:0005622
GST_C
Glutathione S-transferase, C-terminal domain
PF00043
IPR004046
Homeobox
Homeobox domain
PF00046
IPR001356
GO:0003700
GO:0006355
GO:0043565
Sugar_tr
Sugar (and other) transporter
PF00083
IPR005828
GO:0005215
GO:0006810
GO:0016021
GO:0055085
ADH_zinc_N
Zinc-binding dehydrogenase
PF00107
IPR013149
GO:0008270
GO:0016491
GO:0055114
GATase
Glutamine amidotransferase class-I
PF00117
IPR000991
GO:0003824
tRNA-synt_1
tRNA synthetases class I (I, L, M and V)
PF00133
IPR002300
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
Metallophos
Calcineurin-like phosphoesterase
PF00149
IPR004843
GO:0016787
Zn_clus
Fungal Zn(2)-Cys(6) binuclear cluster domain
PF00172
IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
SNF2_N
SNF2 family N-terminal domain
PF00176
IPR000330
GO:0003677
GO:0005524
Fork_head
Fork head domain
PF00250
IPR001766
GO:0003700
GO:0005634
GO:0006355
GO:0043565
PALP
Pyridoxal-phosphate dependent enzyme
PF00291
IPR001926
GO:0003824
GO:0008152
GO:0030170
GATase_2
Glutamine amidotransferases class-II
PF00310
IPR000583
GO:0008152
WD40
WD domain, G-beta repeat
PF00400
IPR019781
PP2C
Protein phosphatase 2C
PF00481
IPR014045
Glycos_transf_1
Glycosyl transferases group 1
PF00534
IPR001296
GO:0009058
EAL
EAL domain
PF00563
IPR001633
TBC
TBC domain
PF00566
IPR000195
GO:0005097
GO:0005622
GO:0032313
CBS
CBS domain pair
PF00571
IPR000644
AhpC-TSA
AhpC/TSA family
PF00578
IPR000866
GO:0016209
GO:0016491
PDZ
PDZ domain (Also known as DHR or GLGF)
PF00595
IPR001478
GO:0005515
F-box
F-box domain
PF00646
IPR001810
RA
Ras association (RalGDS/AF-6) domain
PF00788
IPR000159
GO:0007165
GGDEF
GGDEF domain
PF00990
IPR000160
RNA_pol_A_bac
RNA polymerase Rpb3/RpoA insert domain
PF01000
IPR011262
GO:0003899
GO:0006350
GO:0046983
RNA_pol_L
RNA polymerase Rpb3/Rpb11 dimerisation domain
PF01193
IPR011261
GO:0003899
GO:0006350
GO:0046983
CK_II_beta
Casein kinase II regulatory subunit
PF01214
IPR000704
GO:0005956
GO:0019887
Granin
Granin (chromogranin or secretogranin)
PF01271
IPR001990
CAP_GLY
CAP-Gly domain
PF01302
IPR000938
mRNA_cap_enzyme
mRNA capping enzyme, catalytic domain
PF01331
IPR001339
GO:0004484
GO:0006370
GO:0006397
SIS
SIS domain
PF01380
IPR001347
GO:0005529
GO:0005975
DIL
DIL domain
PF01843
IPR018444
eIF-5_eIF-2B
Domain found in IF2B/IF5
PF01873
IPR002735
GO:0003743
GO:0006413
Thi4
Thi4 family
PF01946
SMC_N
RecF/RecN/SMC N terminal domain
PF02463
IPR003395
GO:0005524
GO:0005694
GST_N
Glutathione S-transferase, N-terminal domain
PF02798
IPR004045
Spo12
Spo12 family
PF05032
IPR007727
Glycogen_syn
Glycogen synthase
PF05693
IPR008631
GO:0004373
GO:0005978
SMC_hinge
SMC proteins Flexible Hinge Domain
PF06470
IPR010935
GO:0005515
GO:0005524
GO:0005694
GO:0051276
Shugoshin_C
Shugoshin C terminus
PF07557
IPR011515
GO:0000775
GO:0005634
GO:0045132
Shugoshin_N
N-terminal coiled-coil region of kinetochore-attachment protein
PF07558
IPR011516
GO:0000775
GO:0005634
GO:0045132
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Copyright © 2007, Raghavachari et al.
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