Pfam ID
Description
Accession
Interpro ID
GO ID
SMC_N
RecF/RecN/SMC N terminal domain
PF02463
IPR003395
GO:0005524
GO:0005694
SMC_N
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
SMC_N
RecF/RecN/SMC N terminal domain
PF02463
IPR003395
GO:0005524
GO:0005694
Rad50_zn_hook
Rad50 zinc hook motif
PF04423
IPR007517
GO:0004518
GO:0005524
GO:0006281
GO:0008270
Rad21_Rec8
Conserved region of Rad21 / Rec8 like protein
PF04824
IPR006909
GO:0000228
SMC_hinge
SMC proteins Flexible Hinge Domain
PF06470
IPR010935
GO:0005515
GO:0005524
GO:0005694
GO:0051276
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
RNA_pol_L
RNA polymerase Rpb3/Rpb11 dimerisation domain
PF01193
IPR011261
GO:0003899
GO:0006350
GO:0046983
Peptidase_M16_C
Peptidase M16 inactive domain
PF05193
IPR007863
GO:0004222
GO:0006508
GO:0008270
HSP70
Hsp70 protein
PF00012
IPR013126
Actin
Actin
PF00022
IPR004000
GO:0005515
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
zf-C3HC4
Zinc finger, C3HC4 type (RING finger)
PF00097
IPR018957
Cpn60_TCP1
TCP-1/cpn60 chaperonin family
PF00118
IPR002423
GO:0005515
GO:0005524
GO:0044267
Cofilin_ADF
Cofilin/tropomyosin-type actin-binding protein
PF00241
IPR002108
GO:0003779
GO:0005622
Ribonuc_red_sm
Ribonucleotide reductase, small chain
PF00268
IPR000358
GO:0004748
GO:0009186
GO:0055114
UCH
Ubiquitin carboxyl-terminal hydrolase
PF00443
IPR001394
GO:0004221
GO:0006511
FHA
FHA domain
PF00498
IPR000253
Peptidase_M16
Insulinase (Peptidase family M16)
PF00675
IPR011765
GO:0004222
GO:0006508
Ribosomal_L15e
Ribosomal L15
PF00827
IPR000439
GO:0003735
GO:0005622
GO:0005840
GO:0006412
RNA_pol_A_bac
RNA polymerase Rpb3/RpoA insert domain
PF01000
IPR011262
GO:0003899
GO:0006350
GO:0046983
MAGE
MAGE family
PF01454
IPR002190
Toprim
Toprim domain
PF01751
IPR006171
NTP_transf_2
Nucleotidyltransferase domain
PF01909
IPR002934
GO:0016779
KID
KID repeat
PF02524
IPR003900
RecO
Recombination protein O
PF02565
IPR003717
GO:0006281
GO:0006310
PHP
PHP domain
PF02811
IPR004013
GO:0003824
zf-Tim10_DDP
Tim10/DDP family zinc finger
PF02953
IPR004217
GO:0006626
GO:0042719
GO:0045039
Nuf2
Nuf2 family
PF03800
IPR005549
GO:0000775
GO:0007067
Nucleoporin2
Nucleoporin autopeptidase
PF04096
IPR007230
GO:0005643
GO:0006810
SMC_Nse1
Nse1 non-SMC component of SMC5-6 complex
PF07574
IPR011513
Spc24
Spc24 subunit of Ndc80
PF08286
IPR013252
Nse4
Nse4
PF08743
IPR014854
zf-RING-like
RING-like domain
PF08746
IPR014857
Terms of use
Copyright © 2007, Raghavachari et al.
Comments or questions on the site? Send an email to jothi AT mail.nih.gov