TFIIB_Zn_Ribbon

• Pfam ID: TFIIB_Zn_Ribbon
• Description: TFIIB zinc-binding
• Accession: PF08271
• Interpro ID: IPR013137
• GO ID:

  GO:0008270

  GO:0045449

TFIIB_Zn_Ribbon forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
RNA_pol_Rpb2_6	RNA polymerase Rpb2, domain 6	PF00562	IPR007120	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	PF00623	IPR000722	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_1	RNA polymerase Rpb1, domain 1	PF04997	IPR007080	GO:0003677 GO:0003899 GO:0006350
Aldedh	Aldehyde dehydrogenase family	PF00171	IPR015590	GO:0008152 GO:0016491 GO:0055114
Thymidylat_synt	Thymidylate synthase	PF00303	IPR000398	GO:0004799 GO:0006231
DLH	Dienelactone hydrolase family	PF01738	IPR002925	GO:0016787
HLH	Helix-loop-helix DNA-binding domain	PF00010	IPR001092	GO:0030528 GO:0045449
Arf	ADP-ribosylation factor family	PF00025	IPR006689	GO:0005525
cNMP_binding	Cyclic nucleotide-binding domain	PF00027	IPR000595
Ras	Ras family	PF00071	IPR013753
SCP	SCP-like extracellular protein	PF00188	IPR014044
TBP	Transcription factor TFIID (or TATA-binding protein, TBP)	PF00352	IPR000814	GO:0003677 GO:0003702 GO:0006355 GO:0006367
Rotamase	PPIC-type PPIASE domain	PF00639	IPR000297	GO:0016853
FAD_binding_6	Oxidoreductase FAD-binding domain	PF00970	IPR008333	GO:0016491 GO:0055114
Ribosomal_S7e	Ribosomal protein S7e	PF01251	IPR000554	GO:0003735 GO:0005622 GO:0005840 GO:0006412
RRF	Ribosome recycling factor	PF01765	IPR002661	GO:0006412
UBACT	Repeat in ubiquitin-activating (UBA) protein	PF02134	IPR000127	GO:0005524 GO:0006464 GO:0008641
CBM_48	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)	PF02922	IPR004193	GO:0004553 GO:0005975
Rcd1	Cell differentiation family, Rcd1-like	PF04078	IPR007216
OST3_OST6	OST3 / OST6 family	PF04756	IPR021149
Actin	Actin	PF00022	IPR004000	GO:0005515
Thioredoxin	Thioredoxin	PF00085	IPR013766	GO:0045454
zf-C2H2	Zinc finger, C2H2 type	PF00096	IPR007087	GO:0005622 GO:0008270
Alpha-amylase	Alpha amylase, catalytic domain	PF00128	IPR006047	GO:0003824 GO:0005975 GO:0043169
Metallophos	Calcineurin-like phosphoesterase	PF00149	IPR004843	GO:0016787
ubiquitin	Ubiquitin family	PF00240	IPR000626
PGAM	Phosphoglycerate mutase family	PF00300	IPR013078
GATase_2	Glutamine amidotransferases class-II	PF00310	IPR000583	GO:0008152
Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	PF00317	IPR013509	GO:0004748 GO:0005524 GO:0006260 GO:0055114
Glyco_hydro_17	Glycosyl hydrolases family 17	PF00332	IPR000490	GO:0004553 GO:0005975
dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	PF00383	IPR002125	GO:0008270 GO:0016787
WW	WW domain	PF00397	IPR001202	GO:0005515
WD40	WD domain, G-beta repeat	PF00400	IPR019781
Ribosomal_60s	60s Acidic ribosomal protein	PF00428	IPR001813	GO:0003735 GO:0005622 GO:0005840 GO:0006414
Glutaredoxin	Glutaredoxin	PF00462	IPR002109	GO:0009055 GO:0015035 GO:0045454
SRP1_TIP1	Seripauperin and TIP1 family	PF00660	IPR000992	GO:0006950
DUP	DUP family	PF00674	IPR001142
THF_DHG_CYH	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	PF00763	IPR020630	GO:0003824 GO:0009396
PWWP	PWWP domain	PF00855	IPR000313
ThiF	ThiF family	PF00899	IPR000594	GO:0003824
ETF	Electron transfer flavoprotein domain	PF01012	IPR014730
Peptidase_M3	Peptidase family M3	PF01432	IPR001567	GO:0004222 GO:0006508
eIF-5_eIF-2B	Domain found in IF2B/IF5	PF01873	IPR002735	GO:0003743 GO:0006413
SRP19	SRP19 protein	PF01922	IPR002778	GO:0006614 GO:0008312 GO:0048500
RIIa	Regulatory subunit of type II PKA R-subunit	PF02197	IPR003117	GO:0007165 GO:0008603
PC4	Transcriptional Coactivator p15 (PC4)	PF02229	IPR003173	GO:0003677 GO:0003713 GO:0006355
TFIIA_gamma_N	Transcription initiation factor IIA, gamma subunit, helical domain	PF02268	IPR015872	GO:0003702 GO:0005672 GO:0006367
TFIIF_beta	Transcription initiation factor IIF, beta subunit	PF02270	IPR003196	GO:0003702 GO:0005524 GO:0005674 GO:0006367
Zip	ZIP Zinc transporter	PF02535	IPR003689	GO:0016020 GO:0030001 GO:0046873 GO:0055085
HEAT	HEAT repeat	PF02985	IPR000357
TFIIA	Transcription factor IIA, alpha/beta subunit	PF03153	IPR004855	GO:0003702 GO:0005672 GO:0006367
ATP-cone	ATP cone domain	PF03477	IPR005144
Mtc	Tricarboxylate carrier	PF03820	IPR004686	GO:0006812 GO:0008324 GO:0016020 GO:0055085
Sec62	Translocation protein Sec62	PF03839	IPR004728	GO:0008565 GO:0015031 GO:0016021
Psf2	Partner of SLD five, PSF2	PF04128
Spc97_Spc98	Spc97 / Spc98 family	PF04130	IPR007259	GO:0000226 GO:0000922 GO:0005815
EAP30	EAP30/Vps36 family	PF04157	IPR007286
RTA1	RTA1 like protein	PF04479	IPR007568	GO:0006950 GO:0016021
Rft-1	Rft protein	PF04506	IPR007594	GO:0005319 GO:0006869 GO:0016021
ATP-synt_G	Mitochondrial ATP synthase g subunit	PF04718	IPR006808	GO:0000276 GO:0015078 GO:0015986
Glu_syn_central	Glutamate synthase central domain	PF04898	IPR006982	GO:0006807 GO:0015930 GO:0055114
PEX11	Peroxisomal biogenesis factor 11 (PEX11)	PF05648
Sad1_UNC	Sad1 / UNC-like C-terminal	PF07738	IPR012919
FAD_binding_8	FAD-binding domain	PF08022	IPR013112
NBP1	Fungal Nap binding protein NBP1	PF08537	IPR013743
NCA2	ATP synthase regulation protein NCA2	PF08637	IPR013946
DUF1892	Protein of unknown function (DUF1892)	PF08987	IPR015080