Pfam ID
Description
Accession
Interpro ID
GO ID
SNARE
SNARE domain
PF05739
IPR000727
SNARE
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Syntaxin
Syntaxin
PF00804
IPR006011
GO:0016020
SNAP-25
SNAP-25 family
PF00835
IPR000928
Synaptobrevin
Synaptobrevin
PF00957
IPR001388
GO:0016021
GO:0016192
Sec1
Sec1 family
PF00995
IPR001619
GO:0006904
GO:0016192
Peptidase_M27
Clostridial neurotoxin zinc protease
PF01742
IPR000395
GO:0006508
GO:0008233
GO:0009405
V-SNARE
Vesicle transport v-SNARE protein
PF05008
IPR007705
GO:0006886
GO:0016020
SNARE
SNARE domain
PF05739
IPR000727
Synaphin
Synaphin protein
PF05835
IPR008849
GO:0006836
GO:0019905
Adaptin_N
Adaptin N terminal region
PF01602
IPR002553
GO:0005515
GO:0006886
GO:0016192
GO:0030117
CDC48_2
Cell division protein 48 (CDC48), domain 2
PF02933
IPR004201
GO:0005524
Ras
Ras family
PF00071
IPR013753
WD40
WD domain, G-beta repeat
PF00400
IPR019781
PX
PX domain
PF00787
IPR001683
GO:0005515
GO:0007154
GO:0035091
F_actin_cap_B
F-actin capping protein, beta subunit
PF01115
IPR001698
GO:0003779
GO:0005737
GO:0008290
GO:0030036
NSF
Aromatic-di-Alanine (AdAR) repeat
PF02071
IPR000744
GO:0005783
GO:0005794
GO:0006886
MAP1_LC3
Microtubule associated protein 1A/1B, light chain 3
PF02991
IPR004241
Arf
ADP-ribosylation factor family
PF00025
IPR006689
GO:0005525
GST_C
Glutathione S-transferase, C-terminal domain
PF00043
IPR004046
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Metallophos
Calcineurin-like phosphoesterase
PF00149
IPR004843
GO:0016787
Prenyltrans
Prenyltransferase and squalene oxidase repeat
PF00432
IPR001330
GO:0003824
Gelsolin
Gelsolin repeat
PF00626
IPR007123
Clat_adaptor_s
Clathrin adaptor complex small chain
PF01217
UPF0057
Uncharacterized protein family UPF0057
PF01679
IPR000612
GO:0016021
vATP-synt_AC39
ATP synthase (C/AC39) subunit
PF01992
IPR002843
GO:0015078
GO:0015986
GO:0033177
PRA1
PRA1 family protein
PF03208
IPR004895
Coatomer_WDAD
Coatomer WD associated region
PF04053
IPR006692
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030117
APG17
Autophagy protein Apg17
PF04108
IPR007240
GO:0006914
Coatomer_E
Coatomer epsilon subunit
PF04733
IPR006822
GO:0005198
GO:0005515
GO:0006890
GO:0030126
zf-Sec23_Sec24
Sec23/Sec24 zinc finger
PF04810
IPR006895
GO:0005515
GO:0006886
GO:0006888
GO:0008270
GO:0030127
Sec23_trunk
Sec23/Sec24 trunk domain
PF04811
IPR006896
GO:0005515
GO:0006886
GO:0006888
GO:0030127
Sec23_helical
Sec23/Sec24 helical domain
PF04815
IPR006900
GO:0005515
GO:0006886
GO:0006888
GO:0030127
Yip1
Yip1 domain
PF04893
IPR006977
GO:0016020
UPF0220
Uncharacterised protein family (UPF0220)
PF05255
IPR007919
Coatamer_beta_C
Coatamer beta C-terminal region
PF07718
IPR011710
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030126
COPI_assoc
COPI associated protein
PF08507
IPR013714
Vps51
Vps51/Vps67
PF08700
IPR014812
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Copyright © 2007, Raghavachari et al.
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