Pfam ID Description Accession Interpro ID GO ID
HhH-GPD HhH-GPD superfamily base excision DNA repair protein PF00730 IPR003265
GO:0006284



HhH-GPD forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
HHH Helix-hairpin-helix motif PF00633 IPR000445
GO:0003677
PDB IPFAM 3DID ME FUSION
HhH-GPD HhH-GPD superfamily base excision DNA repair protein PF00730 IPR003265
GO:0006284
PDB IPFAM 3DID ME
AlkA_N AlkA N-terminal domain PF06029 IPR010316
PDB IPFAM 3DID
OGG_N 8-oxoguanine DNA glycosylase, N-terminal domain PF07934 IPR012904
GO:0003684
GO:0006289
GO:0008534
PDB IPFAM 3DID
EndIII_4Fe-2S Iron-sulfur binding domain of endonuclease III PF10576 IPR003651
GO:0004519
GO:0051539
PDB 3DID
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
GO:0003677
HCP DPEA PE GPE RDFF
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
MCP GPE RDFF
IMPDH IMP dehydrogenase / GMP reductase domain PF00478 IPR001093
GO:0003824
GO:0055114
MCP GPE RDFF
CBS CBS domain pair PF00571 IPR000644
MCP GPE RDFF
AAA ATPase family associated with various cellular activities (AAA) PF00004 IPR003959
GO:0005524
LCP RDFF
Actin Actin PF00022 IPR004000
GO:0005515
LCP RDFF
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
LCP RDFF
HTH_AraC Bacterial regulatory helix-turn-helix proteins, AraC family PF00165 IPR000005
GO:0003700
GO:0005622
GO:0006355
GO:0043565
LCP FUSION
Iso_dh Isocitrate/isopropylmalate dehydrogenase PF00180 IPR001804
GO:0000287
GO:0016616
GO:0051287
GO:0055114
LCP RDFF
DEAD DEAD/DEAH box helicase PF00270 IPR011545
GO:0003676
GO:0005524
GO:0008026
LCP RDFF
WD40 WD domain, G-beta repeat PF00400 IPR019781
LCP RDFF
Linker_histone linker histone H1 and H5 family PF00538 IPR005818
GO:0000786
GO:0003677
GO:0005634
GO:0006334
LCP DPEA PE
RTC RNA 3'-terminal phosphate cyclase PF01137 IPR000228
LCP DIPD
Ada_Zn_binding Metal binding domain of Ada PF02805 IPR004026
GO:0003677
GO:0006281
GO:0006355
GO:0008168
GO:0008270
LCP FUSION
MIF4G MIF4G domain PF02854 IPR003890
GO:0005515
GO:0016070
LCP RDFF
Nrap Nrap protein PF03813 IPR005554
LCP DPEA PE
RTC_insert RNA 3'-terminal phosphate cyclase (RTC), insert domain PF05189 IPR013796
LCP RCDP
RNA_pol_Rpc82 RNA polymerase III subunit RPC82 PF05645 IPR008806
GO:0003677
GO:0003899
GO:0006350
LCP DPEA PE




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