Pfam ID Description Accession Interpro ID GO ID
BRCT BRCA1 C Terminus (BRCT) domain PF00533 IPR001357
GO:0005622



BRCT forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
BRCT BRCA1 C Terminus (BRCT) domain PF00533 IPR001357
GO:0005622
PDB IPFAM 3DID ME PE GPE DIPD RDFF
P53 P53 DNA-binding domain PF00870 IPR011615
GO:0003677
GO:0003700
GO:0005634
GO:0006355
PDB IPFAM PE GPE
XRCC4 DNA double-strand break repair and V(D)J recombination protein XRCC4 PF06632 IPR010585
GO:0003677
GO:0005515
GO:0005634
GO:0006302
GO:0006310
PDB IPFAM 3DID
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
HCP ME RCDP RDFF
Myb_DNA-binding Myb-like DNA-binding domain PF00249 IPR014778
HCP ME FUSION
FHA FHA domain PF00498 IPR000253
HCP ME
HHH Helix-hairpin-helix motif PF00633 IPR000445
GO:0003677
HCP ME FUSION
PARP Poly(ADP-ribose) polymerase catalytic domain PF00644 IPR012317
GO:0003950
HCP ME FUSION
DNA_ligase_aden NAD-dependent DNA ligase adenylation domain PF01653 IPR013839
GO:0003911
HCP ME DIMA
eIF-6 eIF-6 family PF01912 IPR002769
GO:0042256
GO:0043022
HCP PE GPE DIPD RDFF
DNA_ligase_ZBD NAD-dependent DNA ligase C4 zinc finger domain PF03119 IPR004149
GO:0003911
GO:0006260
GO:0006281
HCP ME
DNA_ligase_OB NAD-dependent DNA ligase OB-fold domain PF03120 IPR004150
GO:0003911
GO:0006260
GO:0006281
HCP ME DIMA
Brix Brix domain PF04427 IPR007109
HCP PE GPE DIPD INSITE
Ank Ankyrin repeat PF00023 IPR002110
MCP FUSION DIPD
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
MCP RDFF DOMAINGA
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
MCP FUSION DIPD
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
GO:0003677
MCP PE RDFF
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
GO:0003676
GO:0004386
GO:0005524
MCP RDFF KGIDDI
Oxidored_FMN NADH:flavin oxidoreductase / NADH oxidase family PF00724 IPR001155
GO:0010181
GO:0016491
MCP RDFF INSITE
Nol1_Nop2_Fmu NOL1/NOP2/sun family PF01189 IPR001678
MCP GPE RDFF
CK_II_beta Casein kinase II regulatory subunit PF01214 IPR000704
GO:0005956
GO:0019887
MCP DIPD RDFF
IBB Importin beta binding domain PF01749 IPR002652
GO:0005634
GO:0005643
GO:0005737
GO:0006606
GO:0006886
GO:0008565
MCP DIPD RDFF
eIF-5_eIF-2B Domain found in IF2B/IF5 PF01873 IPR002735
GO:0003743
GO:0006413
MCP DIPD RDFF
AAA ATPase family associated with various cellular activities (AAA) PF00004 IPR003959
GO:0005524
LCP FUSION
HSP20 Hsp20/alpha crystallin family PF00011 IPR002068
LCP RDFF
dsrm Double-stranded RNA binding motif PF00035 IPR001159
GO:0003725
GO:0005622
LCP DIMA
fn3 Fibronectin type III domain PF00041 IPR003961
LCP FUSION
VWA von Willebrand factor type A domain PF00092 IPR002035
LCP FUSION
ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain PF00109 IPR014030
LCP DIMA
TIM Triosephosphate isomerase PF00121 IPR000652
GO:0004807
GO:0008152
LCP DIMA
Sigma70_r1_2 Sigma-70 factor, region 1.2 PF00140 IPR009042
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
LCP DIMA
Metallophos Calcineurin-like phosphoesterase PF00149 IPR004843
GO:0016787
LCP RDFF
Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain PF00163 IPR001912
GO:0005622
GO:0019843
LCP DIMA
Cpn10 Chaperonin 10 Kd subunit PF00166 IPR020818
GO:0005737
GO:0006457
LCP DIMA
Ribosomal_L2 Ribosomal Proteins L2, RNA binding domain PF00181 IPR022666
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIPD
Bac_DNA_binding Bacterial DNA-binding protein PF00216 IPR000119
GO:0003677
LCP DIMA
Ribosomal_L16 Ribosomal protein L16p/L10e PF00252 IPR016180
GO:0003735
GO:0005840
GO:0006412
LCP DIMA
DEAD DEAD/DEAH box helicase PF00270 IPR011545
GO:0003676
GO:0005524
GO:0008026
LCP RDFF
Bac_DnaA Bacterial dnaA protein PF00308 IPR013317
LCP DIMA
WD40 WD domain, G-beta repeat PF00400 IPR019781
LCP RDFF
Ribosomal_S3_N Ribosomal protein S3, N-terminal domain PF00417 IPR008282
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
SSB Single-strand binding protein family PF00436 IPR000424
GO:0003697
LCP DIMA
Ribosomal_L20 Ribosomal protein L20 PF00453 IPR005813
GO:0003735
GO:0005622
GO:0005840
GO:0006412
GO:0019843
LCP DIMA
Ribosomal_L34 Ribosomal protein L34 PF00468 IPR000271
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
RF-1 RF-1 domain PF00472 IPR000352
GO:0003747
GO:0006415
LCP DIMA
DNA_pol_A DNA polymerase family A PF00476 IPR001098
GO:0003677
GO:0003887
GO:0006260
LCP DIMA
MutS_V MutS domain V PF00488 IPR000432
GO:0005524
GO:0006298
GO:0030983
LCP DIMA
Arm Armadillo/beta-catenin-like repeat PF00514 IPR000225
LCP RDFF
Ribosomal_L12 Ribosomal protein L7/L12 C-terminal domain PF00542 IPR013823
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
PP-binding Phosphopantetheine attachment site PF00550 IPR006163
GO:0048037
LCP DIMA
CLP_protease Clp protease PF00574 IPR001907
GO:0004252
GO:0006508
LCP DIMA
RhoGEF RhoGEF domain PF00621 IPR000219
GO:0005089
GO:0005622
GO:0035023
LCP FUSION
Ribonuclease_3 RNase3 domain PF00636 IPR000999
GO:0003723
GO:0004525
GO:0006396
LCP DIMA
E1_dh Dehydrogenase E1 component PF00676 IPR001017
GO:0008152
GO:0016624
LCP RDFF
Acyl_transf_1 Acyl transferase domain PF00698 IPR014043
LCP DIMA
IF3_C Translation initiation factor IF-3, C-terminal domain PF00707 IPR019815
GO:0003743
GO:0006413
LCP DIMA
DNA_pol3_beta DNA polymerase III beta subunit, N-terminal domain PF00712 IPR022634
GO:0003677
GO:0003887
GO:0006260
GO:0008408
GO:0009360
LCP DIMA
DnaB DnaB-like helicase N terminal domain PF00772 IPR007693
GO:0003678
GO:0005524
GO:0006260
LCP DIMA
DSPc Dual specificity phosphatase, catalytic domain PF00782 IPR000340
GO:0006470
GO:0008138
LCP RDFF
IMS impB/mucB/samB family PF00817 IPR001126
GO:0003684
GO:0003887
GO:0006281
LCP FUSION
Ribosomal_L21p Ribosomal prokaryotic L21 protein PF00829 IPR001787
GO:0003723
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
Ribosomal_L28 Ribosomal L28 family PF00830 IPR001383
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
PseudoU_synth_2 RNA pseudouridylate synthase PF00849 IPR006145
GO:0001522
GO:0003723
GO:0009451
GO:0009982
LCP DIMA
Ribosomal_S16 Ribosomal protein S16 PF00886 IPR000307
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
EF_TS Elongation factor TS PF00889 IPR014039
GO:0003746
GO:0005622
GO:0006414
LCP DIMA
Transpeptidase Penicillin binding protein transpeptidase domain PF00905 IPR001460
GO:0008658
GO:0009273
LCP DIMA
Transgly Transglycosylase PF00912 IPR001264
GO:0003824
GO:0009252
GO:0009274
LCP DIMA
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain PF01000 IPR011262
GO:0003899
GO:0006350
GO:0046983
LCP DIMA
Ribosomal_L27 Ribosomal L27 protein PF01016 IPR001684
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
NusB NusB family PF01029 IPR006027
GO:0003723
GO:0006355
LCP DIMA
DNA_ligase_A_M ATP dependent DNA ligase domain PF01068 IPR012310
GO:0003910
GO:0005524
GO:0006260
GO:0006281
GO:0006310
LCP FUSION
Ribosomal_S18 Ribosomal protein S18 PF01084 IPR001648
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
FTSW_RODA_SPOVE Cell cycle protein PF01098 IPR001182
GO:0007049
GO:0016021
LCP DIMA
DNA_mis_repair DNA mismatch repair protein, C-terminal domain PF01119 IPR013507
GO:0005524
GO:0006298
GO:0030983
LCP DIMA
CoaE Dephospho-CoA kinase PF01121 IPR001977
GO:0004140
GO:0005524
GO:0015937
LCP DIMA
EFP Elongation factor P (EF-P) OB domain PF01132 IPR001059
GO:0003746
GO:0006414
LCP DIMA
GIDA Glucose inhibited division protein A PF01134 IPR002218
GO:0008033
GO:0050660
LCP DIMA
CTP_transf_1 Cytidylyltransferase family PF01148 IPR000374
GO:0016020
GO:0016772
LCP DIMA
Pept_tRNA_hydro Peptidyl-tRNA hydrolase PF01195 IPR001328
GO:0004045
GO:0006412
LCP DIMA
Ribosomal_L17 Ribosomal protein L17 PF01196 IPR000456
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
SKI Shikimate kinase PF01202 IPR000623
GO:0004765
GO:0005524
LCP DIMA
Dus Dihydrouridine synthase (Dus) PF01207 IPR001269
GO:0008033
GO:0017150
GO:0050660
GO:0055114
LCP DIMA
Mur_ligase Mur ligase family, catalytic domain PF01225 IPR000713
GO:0005524
GO:0009058
LCP DIMA
Ribosomal_L19 Ribosomal protein L19 PF01245 IPR001857
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
Peptidase_A8 Signal peptidase (SPase) II PF01252 IPR001872
GO:0004190
GO:0006508
GO:0016020
LCP DIMA
Fibrillarin Fibrillarin PF01269 IPR000692
GO:0003723
GO:0006364
GO:0008033
GO:0008168
LCP RDFF
Ribosomal_L9_N Ribosomal protein L9, N-terminal domain PF01281 IPR020070
LCP DIMA
Ribosomal_L15 Ribosomal protein L15 amino terminal region PF01305
LCP DIMA
Pep_deformylase Polypeptide deformylase PF01327 IPR000181
GO:0005506
GO:0006412
GO:0042586
LCP DIMA
5_3_exonuc 5'-3' exonuclease, C-terminal SAM fold PF01367 IPR020047
GO:0003677
GO:0008409
LCP DIMA
Peptidase_M41 Peptidase family M41 PF01434 IPR000642
GO:0004222
GO:0005524
GO:0006508
LCP DIMA
LysM LysM domain PF01476 IPR018392
GO:0016998
LCP DIMA
Acyltransferase Acyltransferase PF01553 IPR002123
GO:0008152
GO:0008415
LCP DIMA
Ribosomal_L35p Ribosomal protein L35 PF01632 IPR021137
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIMA
DUF28 Domain of unknown function DUF28 PF01709 IPR002876
LCP DIMA
IPPT IPP transferase PF01715 IPR002627
GO:0004811
GO:0005524
GO:0008033
LCP DIMA
PolyA_pol Poly A polymerase head domain PF01743 IPR002646
GO:0003723
GO:0006396
GO:0016779
LCP DIMA
tRNA_m1G_MT tRNA (Guanine-1)-methyltransferase PF01746 IPR016009
LCP DIMA
RRF Ribosome recycling factor PF01765 IPR002661
GO:0006412
LCP DIMA
RimM RimM N-terminal domain PF01782 IPR002676
GO:0006364
LCP DIMA
LGT Prolipoprotein diacylglyceryl transferase PF01790 IPR001640
GO:0009249
GO:0016020
GO:0016757
GO:0042158
LCP DIMA
Methyltransf_5 MraW methylase family PF01795 IPR002903
GO:0008168
LCP DIMA
zf-CHC2 CHC2 zinc finger PF01807 IPR002694
GO:0003677
GO:0003896
GO:0006260
GO:0008270
LCP DIMA
XRCC1_N XRCC1 N terminal domain PF01834 IPR002706
GO:0000012
GO:0003684
GO:0005634
LCP FUSION
NTP_transf_2 Nucleotidyltransferase domain PF01909 IPR002934
GO:0016779
LCP FUSION
W2 eIF4-gamma/eIF5/eIF2-epsilon PF02020 IPR003307
LCP RDFF
60KD_IMP 60Kd inner membrane protein PF02096 IPR001708
GO:0016021
GO:0051205
LCP DIMA
E2F_TDP E2F/DP family winged-helix DNA-binding domain PF02319 IPR003316
GO:0003700
GO:0005667
GO:0006355
LCP GPE
NusG Transcription termination factor nusG PF02357 IPR006645
GO:0003711
GO:0032968
LCP DIMA
UPF0079 Uncharacterised P-loop hydrolase UPF0079 PF02367 IPR003442
LCP DIMA
Methyltransf_4 Putative methyltransferase PF02390 IPR003358
GO:0006400
GO:0008176
LCP DIMA
DUF143 Domain of unknown function DUF143 PF02410 IPR004394
LCP DIMA
5_3_exonuc_N 5'-3' exonuclease, N-terminal resolvase-like domain PF02739 IPR020046
GO:0003677
GO:0008409
LCP DIMA
DNA_pol3_beta_2 DNA polymerase III beta subunit, central domain PF02767 IPR022637
GO:0003677
GO:0003887
GO:0006260
GO:0008408
GO:0009360
LCP DIMA
DNA_pol3_beta_3 DNA polymerase III beta subunit, C-terminal domain PF02768 IPR022635
GO:0003677
GO:0003887
GO:0006260
GO:0008408
GO:0009360
LCP DIMA
Transket_pyr Transketolase, pyrimidine binding domain PF02779 IPR005475
LCP RDFF
Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain PF02801 IPR014031
LCP DIMA
MIF4G MIF4G domain PF02854 IPR003890
GO:0005515
GO:0016070
LCP RDFF
MurB_C UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PF02873 IPR011601
GO:0008762
GO:0009252
GO:0055114
LCP DIMA
PARP_reg Poly(ADP-ribose) polymerase, regulatory domain PF02877 IPR004102
GO:0003950
GO:0006471
LCP FUSION
Formyl_trans_C Formyl transferase, C-terminal domain PF02911 IPR005793
GO:0009058
GO:0016742
LCP DIMA
Phe_tRNA-synt_N Aminoacyl tRNA synthetase class II, N-terminal domain PF02912 IPR004188
GO:0000166
GO:0004826
GO:0005524
GO:0005737
GO:0006412
GO:0006432
LCP DIMA
NIF NLI interacting factor-like phosphatase PF03031 IPR004274
LCP FUSION
Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain PF03033 IPR004276
GO:0005975
GO:0016758
GO:0030259
LCP DIMA
tRNA_Me_trans tRNA methyl transferase PF03054
GO:0005737
GO:0008033
GO:0016740
LCP DIMA
FDX-ACB Ferredoxin-fold anticodon binding domain PF03147 IPR005121
GO:0000049
GO:0000287
GO:0004826
GO:0005524
GO:0006432
GO:0008033
LCP DIMA
TRCF TRCF domain PF03461 IPR005118
GO:0003684
GO:0004386
GO:0005524
GO:0006281
LCP DIMA
PCRF PCRF domain PF03462 IPR005139
GO:0005737
GO:0006415
GO:0016149
LCP DIMA
CorC_HlyC Transporter associated domain PF03471 IPR005170
LCP DIMA
Cons_hypoth95 Conserved hypothetical protein 95 PF03602 IPR004398
GO:0008168
GO:0031167
LCP DIMA
PBP_dimer Penicillin-binding Protein dimerisation domain PF03717 IPR005311
GO:0008658
LCP DIMA
DnaB_C DnaB-like helicase C terminal domain PF03796 IPR007694
GO:0003678
GO:0005524
GO:0006260
LCP DIMA
SecG Preprotein translocase SecG subunit PF03840 IPR004692
GO:0009306
GO:0015450
GO:0016021
LCP DIMA
Nup84_Nup100 Nuclear pore protein 84 / 107 PF04121 IPR007252
GO:0005643
GO:0006810
LCP INSITE
Rad9 Rad9 PF04139 IPR007268
GO:0006281
LCP DPEA PE
DNA_ligase_A_N DNA ligase N terminus PF04675 IPR012308
GO:0003677
GO:0003910
GO:0006260
GO:0006281
GO:0006310
LCP FUSION
DNA_ligase_A_C ATP dependent DNA ligase C terminal region PF04679 IPR012309
GO:0003910
GO:0006260
GO:0006281
GO:0006310
LCP FUSION
WGR WGR domain PF05406 IPR008893
LCP FUSION
zf-DBF DBF zinc finger PF07535 IPR006572
GO:0003676
GO:0008270
LCP FUSION
ChAPs ChAPs (Chs5p-Arf1p-binding proteins) PF09295 IPR015374
LCP INSITE




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