Pfam ID
Description
Accession
Interpro ID
GO ID
DNA_ligase_A_M
ATP dependent DNA ligase domain
PF01068
IPR012310
GO:0003910
GO:0005524
GO:0006260
GO:0006281
GO:0006310
DNA_ligase_A_M
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
DNA_ligase_A_N
DNA ligase N terminus
PF04675
IPR012308
GO:0003677
GO:0003910
GO:0006260
GO:0006281
GO:0006310
DNA_ligase_A_C
ATP dependent DNA ligase C terminal region
PF04679
IPR012309
GO:0003910
GO:0006260
GO:0006281
GO:0006310
Transket_pyr
Transketolase, pyrimidine binding domain
PF02779
IPR005475
HSP70
Hsp70 protein
PF00012
IPR013126
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
Zn_clus
Fungal Zn(2)-Cys(6) binuclear cluster domain
PF00172
IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
WD40
WD domain, G-beta repeat
PF00400
IPR019781
BRCT
BRCA1 C Terminus (BRCT) domain
PF00533
IPR001357
GO:0005622
zf-PARP
Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
PF00645
IPR001510
GO:0003677
GO:0008270
E1_dh
Dehydrogenase E1 component
PF00676
IPR001017
GO:0008152
GO:0016624
PCNA_N
Proliferating cell nuclear antigen, N-terminal domain
PF00705
IPR022648
GO:0003677
GO:0006275
GO:0030337
GO:0043626
eIF-6
eIF-6 family
PF01912
IPR002769
GO:0042256
GO:0043022
Transketolase_C
Transketolase, C-terminal domain
PF02780
IPR005476
GO:0003824
GO:0008152
HA2
Helicase associated domain (HA2)
PF04408
IPR007502
GO:0004386
RNA_pol_Rpb1_6
RNA polymerase Rpb1, domain 6
PF04992
IPR007075
GO:0003677
GO:0003899
GO:0006350
MreB_Mbl
MreB/Mbl protein
PF06723
IPR004753
GO:0000902
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Copyright © 2007, Raghavachari et al.
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