Pfam ID
Description
Accession
Interpro ID
GO ID
CK_II_beta
Casein kinase II regulatory subunit
PF01214
IPR000704
GO:0005956
GO:0019887
CK_II_beta
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
CK_II_beta
Casein kinase II regulatory subunit
PF01214
IPR000704
GO:0005956
GO:0019887
CBS
CBS domain pair
PF00571
IPR000644
Hist_deacetyl
Histone deacetylase domain
PF00850
IPR000286
Nrap
Nrap protein
PF03813
IPR005554
BAF1_ABF1
BAF1 / ABF1 chromatin reorganising factor
PF04684
IPR006774
GO:0003677
GO:0005634
GO:0006338
AAA
ATPase family associated with various cellular activities (AAA)
PF00004
IPR003959
GO:0005524
HSP70
Hsp70 protein
PF00012
IPR013126
Globin
Globin
PF00042
IPR000971
GO:0005506
GO:0020037
Ras
Ras family
PF00071
IPR013753
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
Histone
Core histone H2A/H2B/H3/H4
PF00125
IPR007125
GO:0003677
DNA_gyraseB
DNA gyrase B
PF00204
IPR013506
GO:0003677
GO:0003918
GO:0005524
GO:0005694
GO:0006265
Fork_head
Fork head domain
PF00250
IPR001766
GO:0003700
GO:0005634
GO:0006355
GO:0043565
WD40
WD domain, G-beta repeat
PF00400
IPR019781
BRCT
BRCA1 C Terminus (BRCT) domain
PF00533
IPR001357
GO:0005622
CPSase_sm_chain
Carbamoyl-phosphate synthase small chain, CPSase domain
PF00988
IPR002474
GO:0004086
GO:0006807
PCI
PCI domain
PF01399
IPR000717
LSM
LSM domain
PF01423
IPR001163
SIR2
Sir2 family
PF02146
IPR003000
GO:0006342
GO:0006476
GO:0008270
GO:0016811
GO:0045449
GO:0070403
Flavoprotein
Flavoprotein
PF02441
IPR003382
GO:0003824
SOH1
SOH1
PF05669
IPR008831
GO:0016455
GO:0016592
GO:0045449
TIP49
TIP49 C-terminus
PF06068
IPR010339
GO:0003678
GO:0005524
Pescadillo_N
Pescadillo N-terminus
PF06732
IPR010613
GO:0005730
GO:0008283
HLH
Helix-loop-helix DNA-binding domain
PF00010
IPR001092
GO:0030528
GO:0045449
SH3_1
SH3 domain
PF00018
IPR001452
efhand
EF hand
PF00036
IPR018248
Homeobox
Homeobox domain
PF00046
IPR001356
GO:0003700
GO:0006355
GO:0043565
zf-C2H2
Zinc finger, C2H2 type
PF00096
IPR007087
GO:0005622
GO:0008270
GATase
Glutamine amidotransferase class-I
PF00117
IPR000991
GO:0003824
SNF2_N
SNF2 family N-terminal domain
PF00176
IPR000330
GO:0003677
GO:0005524
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
FHA
FHA domain
PF00498
IPR000253
TPR_1
Tetratricopeptide repeat
PF00515
IPR001440
DNA_topoisoIV
DNA gyrase/topoisomerase IV, subunit A
PF00521
IPR002205
GO:0003677
GO:0003918
GO:0005524
GO:0005694
GO:0006265
Nol1_Nop2_Fmu
NOL1/NOP2/sun family
PF01189
IPR001678
Adaptin_N
Adaptin N terminal region
PF01602
IPR002553
GO:0005515
GO:0006886
GO:0016192
GO:0030117
CBM_14
Chitin binding Peritrophin-A domain
PF01607
IPR002557
GO:0005576
GO:0006030
GO:0008061
Ribosomal_L18ae
Ribosomal L18ae protein family
PF01775
IPR021138
GO:0003735
GO:0005622
GO:0005840
GO:0006412
HATPase_c
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02518
IPR003594
GO:0005524
4F5
4F5 protein family
PF04419
IPR007513
CDC73
RNA pol II accessory factor, Cdc73 family
PF05179
IPR007852
eIF-3c_N
Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF3c_N)
PF05470
IPR008905
GO:0003743
GO:0005852
GO:0006413
Spt4
Transcription elongation protein Spt4
PF06093
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Copyright © 2007, Raghavachari et al.
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