Pfam ID
Description
Accession
Interpro ID
GO ID
UCH
Ubiquitin carboxyl-terminal hydrolase
PF00443
IPR001394
GO:0004221
GO:0006511
UCH
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
ubiquitin
Ubiquitin family
PF00240
IPR000626
UCH
Ubiquitin carboxyl-terminal hydrolase
PF00443
IPR001394
GO:0004221
GO:0006511
UBA
UBA/TS-N domain
PF00627
IPR000449
Sgf11
Sgf11 (transcriptional regulation protein)
PF08209
IPR013246
EnY2
Transcription factor e(y)2
PF10163
IPR018783
Proteasome
Proteasome A-type and B-type
PF00227
IPR001353
GO:0004298
GO:0005839
GO:0051603
Peptidase_C12
Ubiquitin carboxyl-terminal hydrolase, family 1
PF01088
IPR001578
GO:0004221
GO:0005622
GO:0006511
PCI
PCI domain
PF01399
IPR000717
AAA
ATPase family associated with various cellular activities (AAA)
PF00004
IPR003959
GO:0005524
SH3_1
SH3 domain
PF00018
IPR001452
efhand
EF hand
PF00036
IPR018248
Myosin_head
Myosin head (motor domain)
PF00063
IPR001609
GO:0003774
GO:0005524
GO:0016459
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
zf-C2H2
Zinc finger, C2H2 type
PF00096
IPR007087
GO:0005622
GO:0008270
PH
PH domain
PF00169
IPR001849
SH2
SH2 domain
PF00017
IPR000980
GO:0005515
Ank
Ankyrin repeat
PF00023
IPR002110
Ras
Ras family
PF00071
IPR013753
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
ADH_zinc_N
Zinc-binding dehydrogenase
PF00107
IPR013149
GO:0008270
GO:0016491
GO:0055114
Histone
Core histone H2A/H2B/H3/H4
PF00125
IPR007125
GO:0003677
C1_1
Phorbol esters/diacylglycerol binding domain (C1 domain)
PF00130
IPR002219
GO:0023034
Aminotran_1_2
Aminotransferase class I and II
PF00155
IPR004839
GO:0009058
GO:0016769
GO:0030170
Ets
Ets-domain
PF00178
IPR000418
GO:0003700
GO:0006355
GO:0043565
Iso_dh
Isocitrate/isopropylmalate dehydrogenase
PF00180
IPR001804
GO:0000287
GO:0016616
GO:0051287
GO:0055114
14-3-3
14-3-3 protein
PF00244
IPR000308
GO:0019904
Fork_head
Fork head domain
PF00250
IPR001766
GO:0003700
GO:0005634
GO:0006355
GO:0043565
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
SRF-TF
SRF-type transcription factor (DNA-binding and dimerisation domain)
PF00319
IPR002100
GO:0003700
GO:0005634
GO:0006355
GO:0043565
WD40
WD domain, G-beta repeat
PF00400
IPR019781
RCC1
Regulator of chromosome condensation (RCC1)
PF00415
IPR000408
RHD
Rel homology domain (RHD)
PF00554
IPR011539
GO:0003700
GO:0005634
GO:0045449
Rhodanese
Rhodanese-like domain
PF00581
IPR001763
DEP
Domain found in Dishevelled, Egl-10, and Pleckstrin
PF00610
IPR000591
GO:0023034
IQ
IQ calmodulin-binding motif
PF00612
IPR000048
SRP1_TIP1
Seripauperin and TIP1 family
PF00660
IPR000992
GO:0006950
MATH
MATH domain
PF00917
IPR002083
Exonuc_X-T
Exonuclease
PF00929
IPR013520
Ribosomal_S3Ae
Ribosomal S3Ae family
PF01015
IPR001593
GO:0003735
GO:0005622
GO:0005840
GO:0006412
F-actin_cap_A
F-actin capping protein alpha subunit
PF01267
IPR018315
Glyco_hydro_47
Glycosyl hydrolase family 47
PF01532
IPR001382
GO:0004571
GO:0005509
GO:0016020
zf-MYND
MYND finger
PF01753
IPR002893
GO:0008270
Surp
Surp module
PF01805
IPR000061
GO:0003723
GO:0006396
NTF2
Nuclear transport factor 2 (NTF2) domain
PF02136
IPR002075
GO:0005622
GO:0006810
zf-UBP
Zn-finger in ubiquitin-hydrolases and other protein
PF02148
IPR001607
GO:0008270
TFIID-31kDa
Transcription initiation factor IID, 31kD subunit
PF02291
IPR003162
GO:0006352
SMC_N
RecF/RecN/SMC N terminal domain
PF02463
IPR003395
GO:0005524
GO:0005694
UIM
Ubiquitin interaction motif
PF02809
IPR003903
Rad50_zn_hook
Rad50 zinc hook motif
PF04423
IPR007517
GO:0004518
GO:0005524
GO:0006281
GO:0008270
DSS1_SEM1
DSS1/SEM1 family
PF05160
IPR007834
NAD_Gly3P_dh_C
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PF07479
IPR006109
GO:0005975
GO:0016614
GO:0055114
Pkinase_Tyr
Protein tyrosine kinase
PF07714
IPR001245
GO:0004672
GO:0005524
GO:0006468
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Copyright © 2007, Raghavachari et al.
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