Pfam ID
Description
Accession
Interpro ID
GO ID
Pro_isomerase
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
PF00160
IPR002130
GO:0003755
GO:0006457
Pro_isomerase
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
efhand
EF hand
PF00036
IPR018248
Metallophos
Calcineurin-like phosphoesterase
PF00149
IPR004843
GO:0016787
Pro_isomerase
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
PF00160
IPR002130
GO:0003755
GO:0006457
Gag_p24
gag gene protein p24 (core nucleocapsid protein)
PF00607
IPR000721
GO:0016032
PRP4
pre-mRNA processing factor 4 (PRP4) like
PF08799
IPR014906
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
GSHPx
Glutathione peroxidase
PF00255
IPR000889
GO:0004602
GO:0006979
GO:0055114
Hist_deacetyl
Histone deacetylase domain
PF00850
IPR000286
SUI1
Translation initiation factor SUI1
PF01253
IPR001950
GO:0003743
GO:0006413
ArsA_ATPase
Anion-transporting ATPase
PF02374
Zip
ZIP Zinc transporter
PF02535
IPR003689
GO:0016020
GO:0030001
GO:0046873
GO:0055085
SOH1
SOH1
PF05669
IPR008831
GO:0016455
GO:0016592
GO:0045449
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Histone
Core histone H2A/H2B/H3/H4
PF00125
IPR007125
GO:0003677
HSP90
Hsp90 protein
PF00183
IPR020576
ubiquitin
Ubiquitin family
PF00240
IPR000626
TPR_1
Tetratricopeptide repeat
PF00515
IPR001440
Rhodanese
Rhodanese-like domain
PF00581
IPR001763
Peptidase_M18
Aminopeptidase I zinc metalloprotease (M18)
PF02127
IPR001948
GO:0004177
GO:0005773
GO:0006508
GO:0008270
HATPase_c
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02518
IPR003594
GO:0005524
V-ATPase_G
Vacuolar (H+)-ATPase G subunit
PF03179
IPR005124
GO:0015992
GO:0016471
GO:0016820
TIP49
TIP49 C-terminus
PF06068
IPR010339
GO:0003678
GO:0005524
MFS_1
Major Facilitator Superfamily
PF07690
IPR011701
GO:0055085
AAA
ATPase family associated with various cellular activities (AAA)
PF00004
IPR003959
GO:0005524
SH3_1
SH3 domain
PF00018
IPR001452
Ank
Ankyrin repeat
PF00023
IPR002110
Ras
Ras family
PF00071
IPR013753
ADH_zinc_N
Zinc-binding dehydrogenase
PF00107
IPR013149
GO:0008270
GO:0016491
GO:0055114
Mito_carr
Mitochondrial carrier protein
PF00153
IPR018108
C2
C2 domain
PF00168
IPR000008
Helicase_C
Helicase conserved C-terminal domain
PF00271
IPR001650
GO:0003676
GO:0004386
GO:0005524
WW
WW domain
PF00397
IPR001202
GO:0005515
WD40
WD domain, G-beta repeat
PF00400
IPR019781
LRR_1
Leucine Rich Repeat
PF00560
IPR001611
GO:0005515
Ran_BP1
RanBP1 domain
PF00638
IPR000156
GO:0046907
Rotamase
PPIC-type PPIASE domain
PF00639
IPR000297
GO:0016853
zf-RanBP
Zn-finger in Ran binding protein and others
PF00641
IPR001876
GO:0005622
GO:0008270
F-box
F-box domain
PF00646
IPR001810
Septin
Septin
PF00735
IPR000038
GO:0005525
GO:0007049
CN_hydrolase
Carbon-nitrogen hydrolase
PF00795
IPR003010
GO:0006807
GO:0016810
PMSR
Peptide methionine sulfoxide reductase
PF01625
IPR002569
GO:0016671
GO:0019538
GO:0055114
SelR
SelR domain
PF01641
IPR002579
GO:0008113
GO:0055114
CbiA
CobQ/CobB/MinD/ParA nucleotide binding domain
PF01656
IPR002586
MORN
MORN repeat
PF02493
IPR003409
2-Hacid_dh_C
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PF02826
IPR006140
GO:0016616
GO:0048037
Succ_DH_flav_C
Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain
PF02910
IPR004112
GO:0016491
GO:0055114
Ndr
Ndr family
PF03096
IPR004142
BAR
BAR domain
PF03114
IPR004148
GO:0005515
GO:0005737
Coatomer_WDAD
Coatomer WD associated region
PF04053
IPR006692
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030117
zf-HIT
HIT zinc finger
PF04438
IPR007529
Endosulfine
cAMP-regulated phosphoprotein/endosulfine conserved region
PF04667
IPR006760
NuA4
Histone acetyltransferase subunit NuA4
PF09340
IPR015418
Terms of use
Copyright © 2007, Raghavachari et al.
Comments or questions on the site? Send an email to jothi AT mail.nih.gov