Pfam ID Description Accession Interpro ID GO ID
Ribosomal_S8e Ribosomal protein S8e PF01201 IPR022309



Ribosomal_S8e forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
WD40 WD domain, G-beta repeat PF00400 IPR019781
HCP RCDP INSITE DOMAINGA
eIF-6 eIF-6 family PF01912 IPR002769
GO:0042256
GO:0043022
 HCP RCDP DIPD INSITE DIMA
Ribosomal_L10 Ribosomal protein L10 PF00466 IPR001790
GO:0005622
GO:0042254
 MCP DIPD INSITE
Acetyltransf_1 Acetyltransferase (GNAT) family PF00583 IPR022610
MCP RCDP DIPD
Glyco_hydro_47 Glycosyl hydrolase family 47 PF01532 IPR001382
GO:0004571
GO:0005509
GO:0016020
 MCP DIPD INSITE
MMR_HSR1 GTPase of unknown function PF01926 IPR002917
GO:0005525
GO:0005622
 MCP GPE DIPD
Brix Brix domain PF04427 IPR007109
MCP RCDP INSITE
NGP1NT NGP1NT (NUC091) domain PF08153 IPR012971
MCP RCDP DIPD
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
 LCP INSITE
Proteasome Proteasome A-type and B-type PF00227 IPR001353
GO:0004298
GO:0005839
GO:0051603
 LCP DIMA
Ribosomal_L3 Ribosomal protein L3 PF00297 IPR000597
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP INSITE
Ribosomal_S2 Ribosomal protein S2 PF00318 IPR001865
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DOMAINGA
Ribosomal_L30 Ribosomal protein L30p/L7e PF00327 IPR000517
GO:0003735
GO:0005840
GO:0006412
 LCP DIPD
TBP Transcription factor TFIID (or TATA-binding protein, TBP) PF00352 IPR000814
GO:0003677
GO:0003702
GO:0006355
GO:0006367
 LCP DIMA
TFIIB Transcription factor TFIIB repeat PF00382 IPR013150
GO:0003743
GO:0005515
GO:0006413
 LCP DIMA
Ribosomal_60s 60s Acidic ribosomal protein PF00428 IPR001813
GO:0003735
GO:0005622
GO:0005840
GO:0006414
 LCP DIMA
MCM MCM2/3/5 family PF00493 IPR001208
GO:0003677
GO:0005524
GO:0006260
 LCP DIMA
EF1_GNE EF-1 guanine nucleotide exchange domain PF00736 IPR014038
GO:0003746
GO:0005853
GO:0006414
 LCP DIMA
XPG_N XPG N-terminal domain PF00752 IPR006085
GO:0004518
GO:0006281
 LCP DIMA
Ribosomal_L15e Ribosomal L15 PF00827 IPR000439
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_L39 Ribosomal L39 protein PF00832 IPR000077
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
XPG_I XPG I-region PF00867 IPR006086
GO:0004518
GO:0006281
 LCP DIMA
Ribosomal_S4e Ribosomal family S4e PF00900 IPR013845
LCP DIMA
Ribosomal_L44 Ribosomal protein L44 PF00935 IPR000552
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S3Ae Ribosomal S3Ae family PF01015 IPR001593
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S19e Ribosomal protein S19e PF01090 IPR001266
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S6e Ribosomal protein S6e PF01092 IPR001377
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
TFIIS_C Transcription factor S-II (TFIIS) PF01096 IPR001222
GO:0003676
GO:0008270
GO:0030528
GO:0045449
 LCP DIMA
CKS Cyclin-dependent kinase regulatory subunit PF01111 IPR000789
GO:0007049
GO:0016538
 LCP DPEA PE
Ribosomal_L21e Ribosomal protein L21e PF01157 IPR001147
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
ATP_bind_3 PP-loop family PF01171 IPR011063
LCP DIMA
SBDS Shwachman-Bodian-Diamond syndrome (SBDS) protein PF01172 IPR019783
LCP DIMA
eIF-1a Translation initiation factor 1A / IF-1 PF01176 IPR006196
GO:0003723
GO:0003743
GO:0006413
 LCP DIMA
RNA_pol_Rpb5_C RNA polymerase Rpb5, C-terminal domain PF01191 IPR000783
GO:0003677
GO:0003899
GO:0006350
 LCP DIMA
RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain PF01193 IPR011261
GO:0003899
GO:0006350
GO:0046983
 LCP DIMA
RNA_pol_N RNA polymerases N / 8 kDa subunit PF01194 IPR000268
GO:0003677
GO:0003899
GO:0006351
 LCP DIMA
Ribosomal_L31e Ribosomal protein L31e PF01198 IPR000054
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S28e Ribosomal protein S28e PF01200 IPR000289
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_L24e Ribosomal protein L24e PF01246 IPR000988
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Fibrillarin Fibrillarin PF01269 IPR000692
GO:0003723
GO:0006364
GO:0008033
GO:0008168
 LCP DIMA
Ribosomal_L19e Ribosomal protein L19e PF01280 IPR000196
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S24e Ribosomal protein S24e PF01282 IPR001976
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
LSM LSM domain PF01423 IPR001163
LCP DIMA
Ribosomal_S27 Ribosomal protein S27a PF01599 IPR002906
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_L32e Ribosomal protein L32 PF01655 IPR001515
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_S27e Ribosomal protein S27 PF01667 IPR000592
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Ribosomal_L37ae Ribosomal L37ae protein family PF01780 IPR002674
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
Nop Putative snoRNA binding domain PF01798 IPR002687
LCP DIMA
DUF46 Putative integral membrane protein DUF46 PF01864 IPR002726
LCP DIMA
Diphthamide_syn Putative diphthamide synthesis protein PF01866 IPR002728
LCP DIMA
Hjc Archaeal holliday junction resolvase (hjc) PF01870 IPR002732
LCP DIMA
AMMECR1 AMMECR1 PF01871 IPR002733
LCP DIMA
eIF-5_eIF-2B Domain found in IF2B/IF5 PF01873 IPR002735
GO:0003743
GO:0006413
 LCP DIMA
Memo Memo-like protein PF01875 IPR002737
LCP DIMA
DUF54 Protein of unknown function DUF54 PF01877 IPR002739
LCP DIMA
DNA_primase_S Eukaryotic and archaeal DNA primase small subunit PF01896 IPR002755
GO:0003896
GO:0006269
 LCP DIMA
ATP_bind_4 ATP-binding region PF01902 IPR002761
LCP DIMA
Ribosomal_L37e Ribosomal protein L37e PF01907 IPR001569
GO:0003735
GO:0005622
GO:0005840
GO:0006412
 LCP DIMA
DS Deoxyhypusine synthase PF01916 IPR002773
GO:0008612
 LCP DIMA
Prefoldin_2 Prefoldin subunit PF01920 IPR002777
GO:0006457
GO:0016272
GO:0051082
 LCP DIMA
SRP19 SRP19 protein PF01922 IPR002778
GO:0006614
GO:0008312
GO:0048500
 LCP DIMA
Thi4 Thi4 family PF01946
LCP DIMA
tRNA_int_endo tRNA intron endonuclease, catalytic C-terminal domain PF01974 IPR006677
GO:0000213
GO:0006388
 LCP DIMA
PTH2 Peptidyl-tRNA hydrolase PTH2 PF01981 IPR002833
GO:0004045
GO:0006412
 LCP DIMA
CTP-dep_RFKase Domain of unknown function DUF120 PF01982 IPR002834
GO:0000166
GO:0000287
GO:0008531
GO:0009398
 LCP DIMA
dsDNA_bind Double-stranded DNA-binding domain PF01984 IPR002836
GO:0003677
 LCP DIMA
TFIIE_alpha TFIIE alpha subunit PF02002
LCP DIMA
TRM N2,N2-dimethylguanosine tRNA methyltransferase PF02005 IPR002905
GO:0003723
GO:0004809
GO:0008033
 LCP DIMA
DUF137 Protein of unknown function DUF137 PF02006 IPR002855
LCP DIMA
CBFB_NFYA CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B PF02045 IPR001289
GO:0003700
GO:0005634
GO:0006355
 LCP DIPD
RNA_POL_M_15KD RNA polymerases M/15 Kd subunit PF02150 IPR001529
GO:0003677
GO:0003899
GO:0006350
 LCP DIMA
MAM33 Mitochondrial glycoprotein PF02330 IPR003428
GO:0005759
 LCP DPEA PE
CDC48_N Cell division protein 48 (CDC48), N-terminal domain PF02359 IPR003338
GO:0005524
 LCP DIMA
Met_10 Met-10+ like-protein PF02475 IPR003402
LCP DIMA
DUF171 Uncharacterized ACR, COG2106 PF02598 IPR003750
LCP DIMA
TYW3 Methyltransferase TYW3 PF02676 IPR003827
LCP DIMA
ERCC4 ERCC4 domain PF02732 IPR006166
GO:0003677
GO:0004518
GO:0005515
GO:0006259
 LCP DIMA
CDC48_2 Cell division protein 48 (CDC48), domain 2 PF02933 IPR004201
GO:0005524
 LCP DIMA
Prefoldin Prefoldin subunit PF02996 IPR004127
GO:0006457
GO:0016272
GO:0051082
 LCP DIMA
ATP_bind_1 Conserved hypothetical ATP binding protein PF03029 IPR004130
GO:0000166
 LCP DIMA
zf-ZPR1 ZPR1 zinc-finger domain PF03367 IPR004457
GO:0005515
GO:0008270
 LCP DIMA
eRF1_1 eRF1 domain 1 PF03463 IPR005140
LCP DIMA
eRF1_2 eRF1 domain 2 PF03464 IPR005141
LCP DIMA
eRF1_3 eRF1 domain 3 PF03465 IPR005142
LCP DIMA
EMG1 EMG1/NEP1 methyltransferase PF03587 IPR005304
LCP DIMA
SDA1 SDA1 PF05285 IPR007949
LCP DIPD
Bystin Bystin PF05291 IPR007955
LCP INSITE
GET2 GET complex subunit GET2 PF08690 IPR014802
LCP INSITE



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