RNA_pol_Rpb1_3

• Pfam ID: RNA_pol_Rpb1_3
• Description: RNA polymerase Rpb1, domain 3
• Accession: PF04983
• Interpro ID: IPR007066
• GO ID:

  GO:0003677

  GO:0003899

  GO:0006350

RNA_pol_Rpb1_3 forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
RNA_pol_Rpb2_6	RNA polymerase Rpb2, domain 6	PF00562	IPR007120	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	PF00623	IPR000722	GO:0003677 GO:0003899 GO:0006350
RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	PF01000	IPR011262	GO:0003899 GO:0006350 GO:0046983
TFIIS_C	Transcription factor S-II (TFIIS)	PF01096	IPR001222	GO:0003676 GO:0008270 GO:0030528 GO:0045449
RNA_pol_Rpb6	RNA polymerase Rpb6	PF01192	IPR006110	GO:0003677 GO:0003899 GO:0006351
RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain	PF01193	IPR011261	GO:0003899 GO:0006350 GO:0046983
RNA_pol_Rpb8	RNA polymerase Rpb8	PF03870	IPR005570	GO:0006350
RNA_pol_Rpb2_7	RNA polymerase Rpb2, domain 7	PF04560	IPR007641	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb2_1	RNA polymerase beta subunit	PF04563	IPR007644	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_6	RNA polymerase Rpb1, domain 6	PF04992	IPR007075	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_1	RNA polymerase Rpb1, domain 1	PF04997	IPR007080	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_5	RNA polymerase Rpb1, domain 5	PF04998	IPR007081	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb1_4	RNA polymerase Rpb1, domain 4	PF05000	IPR007083	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb5_N	RNA polymerase Rpb5, N-terminal domain	PF03871	IPR005571	GO:0003677 GO:0003899 GO:0005634 GO:0006350
RNA_pol_Rpb2_2	RNA polymerase Rpb2, domain 2	PF04561	IPR007642	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb2_3	RNA polymerase Rpb2, domain 3	PF04565	IPR007645	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb5_C	RNA polymerase Rpb5, C-terminal domain	PF01191	IPR000783	GO:0003677 GO:0003899 GO:0006350
RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit	PF02150	IPR001529	GO:0003677 GO:0003899 GO:0006350
RNA_pol_Rpb7_N	RNA polymerase Rpb7-like, N-terminal domain	PF03876	IPR005576	GO:0003899 GO:0006350
RNA_pol_Rpb2_5	RNA polymerase Rpb2, domain 5	PF04567	IPR007647	GO:0003677 GO:0003899 GO:0006350
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	PF00076	IPR000504	GO:0003676
Helicase_C	Helicase conserved C-terminal domain	PF00271	IPR001650	GO:0003676 GO:0004386 GO:0005524
WW	WW domain	PF00397	IPR001202	GO:0005515
S1	S1 RNA binding domain	PF00575	IPR003029	GO:0003723
PUF	Pumilio-family RNA binding repeat	PF00806	IPR001313	GO:0003723
RNA_pol_N	RNA polymerases N / 8 kDa subunit	PF01194	IPR000268	GO:0003677 GO:0003899 GO:0006351
Sigma70_r3	Sigma-70 region 3	PF04539	IPR007624	GO:0003677 GO:0003700 GO:0006352 GO:0006355 GO:0016987
Sigma70_r2	Sigma-70 region 2	PF04542	IPR007627	GO:0003677 GO:0003700 GO:0006352 GO:0006355 GO:0016987
Sigma70_r4	Sigma-70, region 4	PF04545	IPR007630	GO:0003677 GO:0003700 GO:0006352 GO:0006355 GO:0016987