Pfam ID
Description
Accession
Interpro ID
GO ID
PAS
PAS fold
PF00989
IPR013767
GO:0006355
PAS
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Ras
Ras family
PF00071
IPR013753
Response_reg
Response regulator receiver domain
PF00072
IPR001789
GO:0000156
GO:0000160
GO:0006355
PAS
PAS fold
PF00989
IPR013767
GO:0006355
HLH
Helix-loop-helix DNA-binding domain
PF00010
IPR001092
GO:0030528
GO:0045449
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Sigma54_activat
Sigma-54 interaction domain
PF00158
IPR002078
GO:0005524
GO:0005622
GO:0006355
GO:0008134
Zn_clus
Fungal Zn(2)-Cys(6) binuclear cluster domain
PF00172
IPR001138
GO:0003700
GO:0005634
GO:0006355
GO:0008270
HAMP
HAMP domain
PF00672
IPR003660
GO:0004871
GO:0007165
GO:0016021
GAF
GAF domain
PF01590
IPR003018
Hpt
Hpt domain
PF01627
IPR008207
GO:0000160
GO:0004871
HATPase_c
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02518
IPR003594
GO:0005524
HTH_8
Bacterial regulatory protein, Fis family
PF02954
IPR002197
GO:0003700
GO:0006355
Hormone_recep
Ligand-binding domain of nuclear hormone receptor
PF00104
IPR000536
GO:0003700
GO:0003707
GO:0005634
GO:0006355
zf-C4
Zinc finger, C4 type (two domains)
PF00105
IPR001628
GO:0003700
GO:0005634
GO:0006355
GO:0008270
GO:0043565
GATA
GATA zinc finger
PF00320
IPR000679
GO:0003700
GO:0006355
GO:0008270
GO:0043565
Phytochrome
Phytochrome region
PF00360
IPR013515
GO:0004872
GO:0006355
GO:0007600
GO:0008020
GO:0018298
PDEase_I
3'5'-cyclic nucleotide phosphodiesterase
PF00233
IPR002073
GO:0004114
GO:0007165
SBP_bac_3
Bacterial extracellular solute-binding proteins, family 3
PF00497
IPR001638
GO:0005215
GO:0006810
GO:0030288
AMP-binding
AMP-binding enzyme
PF00501
IPR000873
GO:0003824
GO:0008152
HisKA
His Kinase A (phosphoacceptor) domain
PF00512
IPR003661
GO:0000155
GO:0007165
GO:0016020
EAL
EAL domain
PF00563
IPR001633
GGDEF
GGDEF domain
PF00990
IPR000160
CheB_methylest
CheB methylesterase
PF01339
IPR000673
GO:0000156
GO:0000160
GO:0005737
GO:0006935
GO:0008984
CheR
CheR methyltransferase, SAM binding domain
PF01739
IPR022642
CheR_N
CheR methyltransferase, all-alpha domain
PF03705
IPR022641
MHYT
Bacterial signalling protein N terminal repeat
PF03707
IPR005330
DUF1518
Domain of unknown function (DUF1518)
PF07469
IPR010011
GO:0003713
GO:0005634
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Copyright © 2007, Raghavachari et al.
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