Pfam ID Description Accession Interpro ID GO ID
GAF GAF domain PF01590 IPR003018



GAF forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
PDEase_I 3'5'-cyclic nucleotide phosphodiesterase PF00233 IPR002073
GO:0004114
GO:0007165
PDB 3DID ME FUSION
Phytochrome Phytochrome region PF00360 IPR013515
GO:0004872
GO:0006355
GO:0007600
GO:0008020
GO:0018298
PDB 3DID
GAF GAF domain PF01590 IPR003018
PDB IPFAM 3DID ME
PAS_2 PAS fold PF08446 IPR013654
GO:0007600
GO:0008020
GO:0018298
GO:0045449
PDB IPFAM 3DID
Pkinase Protein kinase domain PF00069 IPR017442
GO:0004672
GO:0005524
GO:0006468
HCP ME FUSION
Response_reg Response regulator receiver domain PF00072 IPR001789
GO:0000156
GO:0000160
GO:0006355
HCP ME FUSION
Sigma54_activat Sigma-54 interaction domain PF00158 IPR002078
GO:0005524
GO:0005622
GO:0006355
GO:0008134
HCP ME FUSION
PEP-utilizers PEP-utilising enzyme, mobile domain PF00391 IPR008279
GO:0016310
GO:0016772
HCP ME FUSION
HAMP HAMP domain PF00672 IPR003660
GO:0004871
GO:0007165
GO:0016021
HCP ME FUSION
PAS PAS fold PF00989 IPR013767
GO:0006355
HCP ME FUSION
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 IPR003594
GO:0005524
HCP ME FUSION
PEP-utilizers_C PEP-utilising enzyme, TIM barrel domain PF02896 IPR000121
GO:0016310
GO:0016772
HCP ME FUSION
HTH_8 Bacterial regulatory protein, Fis family PF02954 IPR002197
GO:0003700
GO:0006355
HCP ME FUSION
PEP-utilisers_N PEP-utilising enzyme, N-terminal PF05524 IPR008731
GO:0005351
GO:0005737
GO:0008965
GO:0009401
HCP ME FUSION
MCPsignal Methyl-accepting chemotaxis protein (MCP) signaling domain PF00015 IPR004089
GO:0004871
GO:0007165
GO:0016020
LCP FUSION
Trans_reg_C Transcriptional regulatory protein, C terminal PF00486 IPR001867
GO:0000156
GO:0000160
GO:0003677
GO:0006355
LCP FUSION
HisKA His Kinase A (phosphoacceptor) domain PF00512 IPR003661
GO:0000155
GO:0007165
GO:0016020
LCP FUSION
EAL EAL domain PF00563 IPR001633
LCP FUSION
GGDEF GGDEF domain PF00990 IPR000160
LCP FUSION
Clathrin_lg_ch Clathrin light chain PF01086 IPR000996
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030130
GO:0030132
LCP INSITE




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Copyright © 2007, Raghavachari et al.
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