Pfam ID
Description
Accession
Interpro ID
GO ID
GAF
GAF domain
PF01590
IPR003018
GAF
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
PDEase_I
3'5'-cyclic nucleotide phosphodiesterase
PF00233
IPR002073
GO:0004114
GO:0007165
Phytochrome
Phytochrome region
PF00360
IPR013515
GO:0004872
GO:0006355
GO:0007600
GO:0008020
GO:0018298
GAF
GAF domain
PF01590
IPR003018
PAS_2
PAS fold
PF08446
IPR013654
GO:0007600
GO:0008020
GO:0018298
GO:0045449
Pkinase
Protein kinase domain
PF00069
IPR017442
GO:0004672
GO:0005524
GO:0006468
Response_reg
Response regulator receiver domain
PF00072
IPR001789
GO:0000156
GO:0000160
GO:0006355
Sigma54_activat
Sigma-54 interaction domain
PF00158
IPR002078
GO:0005524
GO:0005622
GO:0006355
GO:0008134
PEP-utilizers
PEP-utilising enzyme, mobile domain
PF00391
IPR008279
GO:0016310
GO:0016772
HAMP
HAMP domain
PF00672
IPR003660
GO:0004871
GO:0007165
GO:0016021
PAS
PAS fold
PF00989
IPR013767
GO:0006355
HATPase_c
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02518
IPR003594
GO:0005524
PEP-utilizers_C
PEP-utilising enzyme, TIM barrel domain
PF02896
IPR000121
GO:0016310
GO:0016772
HTH_8
Bacterial regulatory protein, Fis family
PF02954
IPR002197
GO:0003700
GO:0006355
PEP-utilisers_N
PEP-utilising enzyme, N-terminal
PF05524
IPR008731
GO:0005351
GO:0005737
GO:0008965
GO:0009401
MCPsignal
Methyl-accepting chemotaxis protein (MCP) signaling domain
PF00015
IPR004089
GO:0004871
GO:0007165
GO:0016020
Trans_reg_C
Transcriptional regulatory protein, C terminal
PF00486
IPR001867
GO:0000156
GO:0000160
GO:0003677
GO:0006355
HisKA
His Kinase A (phosphoacceptor) domain
PF00512
IPR003661
GO:0000155
GO:0007165
GO:0016020
EAL
EAL domain
PF00563
IPR001633
GGDEF
GGDEF domain
PF00990
IPR000160
Clathrin_lg_ch
Clathrin light chain
PF01086
IPR000996
GO:0005198
GO:0005515
GO:0006886
GO:0016192
GO:0030130
GO:0030132
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Copyright © 2007, Raghavachari et al.
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