| Pfam ID |
Description |
Accession |
Interpro ID |
| E1-E2_ATPase |
E1-E2 ATPase | PF00122 | IPR008250 |
| E1_DerP2_DerF2 |
ML domain | PF02221 | IPR003172 |
| E1_dh |
Dehydrogenase E1 component | PF00676 | IPR001017 |
| E2 |
Bacteriophage E2-like protein | PF08199 | IPR013184 |
| E2F_TDP |
E2F/DP family winged-helix DNA-binding domain | PF02319 | IPR003316 |
| E2_bind |
E2 binding domain | PF08825 | IPR014929 |
| E3_binding |
e3 binding domain | PF02817 | IPR004167 |
| E6 |
Early Protein (E6) | PF00518 | IPR001334 |
| E7 |
E7 protein, Early protein | PF00527 | IPR000148 |
| EAF |
ELL-associated factor | PF09816 | IPR019194 |
| EAL |
EAL domain | PF00563 | IPR001633 |
| EAP30 |
EAP30/Vps36 family | PF04157 | IPR007286 |
| Eapp_C |
E2F-associated phosphoprotein | PF10238 | IPR019370 |
| EAV_GS |
Equine arteritis virus small envelope glycoprotein | PF01309 | IPR001913 |
| EB |
EB module | PF01683 | IPR006149 |
| EB1 |
EB1-like C-terminal motif | PF03271 | IPR004953 |
| EB1_binding |
EB-1 Binding Domain | PF05937 | IPR009232 |
| Ebola_NP |
Ebola nucleoprotein | PF05505 | IPR008609 |
| EBP |
Emopamil binding protein | PF05241 | IPR007905 |
| Ebp2 |
Eukaryotic rRNA processing protein EBP2 | PF05890 | IPR008610 |
| EBP50_C-term |
EBP50, C-terminal | PF09007 | IPR015098 |
| EBV-NA1 |
Epstein Barr virus nuclear antigen-1, DNA-binding domain | PF02905 | IPR004186 |
| EBV-NA3 |
Epstein-Barr virus nuclear antigen 3 (EBNA-3) | PF05009 | IPR007706 |
| EB_dh |
Ethylbenzene dehydrogenase | PF09459 | IPR019020 |
| ECH |
Enoyl-CoA hydratase/isomerase family | PF00378 | IPR001753 |
| Eclosion |
Eclosion hormone | PF04736 | IPR006825 |
| ECM1 |
Extracellular matrix protein 1 (ECM1) | PF05782 | IPR008605 |
| Eco57I |
Eco57I restriction endonuclease | PF07669 | |
| EcoEI_R_C |
EcoEI R protein C-terminal | PF08463 | IPR013670 |
| EcoRI |
Restriction endonuclease EcoRI | PF02963 | IPR004221 |
| EcoRII-C |
EcoRII C terminal | PF09019 | IPR015109 |
| EcoRII-N |
Restriction endonuclease EcoRII, N-terminal | PF09217 | IPR015300 |
| Ecotin |
Ecotin | PF03974 | IPR005658 |
| EcsB |
Bacterial ABC transporter protein EcsB | PF05975 | IPR010288 |
| ECSIT |
ECSIT (evolutionarily conserved signaling intermediate in Toll pathways) | PF06239 | IPR010418 |
| Ectatomin |
Ectatomin | PF06457 | IPR009458 |
| ecTbetaR2 |
Transforming growth factor beta receptor 2 ectodomain | PF08917 | IPR015013 |
| Ectoine_synth |
Ectoine synthase | PF06339 | IPR010462 |
| Eeig1 |
Oestrogen-responsive protein Fam102A-B | PF10358 | IPR019448 |
| EF-1_beta_acid |
Eukaryotic elongation factor 1 beta central acidic region | PF10587 | IPR018940 |
| EF1G |
Elongation factor 1 gamma, conserved domain | PF00647 | IPR001662 |
| EF1_GNE |
EF-1 guanine nucleotide exchange domain | PF00736 | IPR014038 |
| EFG_C |
Elongation factor G C-terminus | PF00679 | IPR000640 |
| EFG_IV |
Elongation factor G, domain IV | PF03764 | IPR005517 |
| efhand |
EF hand | PF00036 | IPR018248 |
| efhand_1 |
EF hand | PF09068 | IPR015153 |
| efhand_2 |
EF-hand | PF09069 | IPR015154 |
| efhand_Ca_insen |
Ca2+ insensitive EF hand | PF08726 | IPR014837 |
| efhand_like |
Phosphoinositide-specific phospholipase C, efhand-like | PF09279 | IPR015359 |
| EFP |
Elongation factor P (EF-P) OB domain | PF01132 | IPR001059 |
| EFP_N |
Elongation factor P (EF-P) KOW-like domain | PF08207 | IPR013185 |
| EF_assoc_1 |
EF hand associated | PF08355 | IPR013566 |
| EF_assoc_2 |
EF hand associated | PF08356 | IPR013567 |
| EF_TS |
Elongation factor TS | PF00889 | IPR014039 |
| EGF |
EGF-like domain | PF00008 | IPR006209 |
| EGF_2 |
EGF-like domain | PF07974 | IPR013111 |
| EGF_alliinase |
Alliinase EGF-like domain | PF04863 | IPR006947 |
| EGF_CA |
Calcium binding EGF domain | PF07645 | IPR013091 |
| Egg_lysin |
Egg lysin (Sperm-lysin) | PF01303 | IPR001379 |
| Ehbp |
Energy-converting hydrogenase B subunit P (EhbP) | PF10622 | IPR019597 |
| EHN |
Epoxide hydrolase N terminus | PF06441 | IPR010497 |
| Ehrlichia_rpt |
Ehrlichia tandem repeat (Ehrlichia_rpt) | PF09528 | IPR019048 |
| EI24 |
Etoposide-induced protein 2.4 (EI24) | PF07264 | IPR009890 |
| EIAV_GP45 |
EIAV glycoprotein, gp45 | PF01045 | |
| EIAV_GP90 |
EIAV coat protein, gp90 | PF00971 | IPR001361 |
| eIF-1a |
Translation initiation factor 1A / IF-1 | PF01176 | IPR006196 |
| eIF-3c_N |
Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF3c_N) | PF05470 | IPR008905 |
| eIF-3_zeta |
Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | PF05091 | IPR007783 |
| eIF-4B |
Plant specific eukaryotic initiation factor 4B | PF06273 | IPR010433 |
| eIF-5a |
Eukaryotic initiation factor 5A hypusine, DNA-binding OB fold | PF01287 | IPR020189 |
| eIF-5_eIF-2B |
Domain found in IF2B/IF5 | PF01873 | IPR002735 |
| eIF-6 |
eIF-6 family | PF01912 | IPR002769 |
| eIF2A |
Eukaryotic translation initiation factor eIF2A | PF08662 | IPR013979 |
| eIF2_C |
Initiation factor eIF2 gamma, C terminal | PF09173 | IPR015256 |
| eIF3_N |
eIF3 subunit 6 N terminal domain | PF09440 | IPR019010 |
| eIF3_subunit |
Translation initiation factor eIF3 subunit | PF08597 | IPR013906 |
| EIF4E-T |
Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E | PF10477 | IPR018862 |
| EIF_2_alpha |
Eukaryotic translation initiation factor 2 alpha subunit | PF07541 | IPR011488 |
| eIF_4EBP |
Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) | PF05456 | IPR008606 |
| EII-GUT |
PTS system enzyme II sorbitol-specific factor | PF03608 | IPR004699 |
| EII-Sor |
PTS system sorbose-specific iic component | PF03609 | IPR004700 |
| EIIA-man |
PTS system fructose IIA component | PF03610 | IPR004701 |
| EIIBC-GUT_C |
Sorbitol phosphotransferase enzyme II C-terminus | PF07663 | IPR011638 |
| EIIBC-GUT_N |
Sorbitol phosphotransferase enzyme II N-terminus | PF03612 | IPR011618 |
| EIIC-GAT |
PTS system Galactitol-specific IIC component | PF03611 | IPR004703 |
| EIID-AGA |
PTS system mannose/fructose/sorbose family IID component | PF03613 | IPR004704 |
| EIN3 |
Ethylene insensitive 3 | PF04873 | IPR006957 |
| EKR |
Domain of unknown function | PF10371 | IPR019456 |
| ELF |
ELF protein | PF03317 | IPR004990 |
| Elf1 |
Transcription elongation factor Elf1 like | PF05129 | IPR007808 |
| ELFV_dehydrog |
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase | PF00208 | IPR006096 |
| ELFV_dehydrog_N |
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain | PF02812 | IPR006097 |
| ELH |
Egg-laying hormone precursor | PF02323 | IPR003424 |
| Elicitin |
Elicitin | PF00964 | IPR002200 |
| ELK |
ELK domain | PF03789 | IPR005539 |
| ELL |
RNA polymerase II elongation factor ELL | PF10390 | IPR019464 |
| ELM2 |
ELM2 domain | PF01448 | IPR000949 |
| ELMO_CED12 |
ELMO/CED-12 family | PF04727 | IPR006816 |
| ELO |
GNS1/SUR4 family | PF01151 | IPR002076 |
| Elong-fact-P_C |
Elongation factor P, C-terminal | PF09285 | IPR015365 |
| Elongin_A |
RNA polymerase II transcription factor SIII (Elongin) subunit A | PF06881 | IPR010684 |
| EMA |
Merozoite Antigen | PF02488 | IPR003407 |
| EMG1 |
EMG1/NEP1 methyltransferase | PF03587 | IPR005304 |
| EMI |
EMI domain | PF07546 | IPR011489 |
| EMP24_GP25L |
emp24/gp25L/p24 family/GOLD | PF01105 | IPR000348 |
| EMP70 |
Endomembrane protein 70 | PF02990 | IPR004240 |
| EndIII_4Fe-2S |
Iron-sulfur binding domain of endonuclease III | PF10576 | IPR003651 |
| Endomucin |
Endomucin | PF07010 | IPR010740 |
| Endonuc-BglII |
Restriction endonuclease BglII | PF09195 | IPR015278 |
| Endonuc-BsobI |
Restriction endonuclease BsobI | PF09194 | IPR015277 |
| Endonuc-dimeris |
T4 recombination endonuclease VII, dimerisation | PF09124 | IPR015208 |
| Endonuc-EcoRV |
Restriction endonuclease EcoRV | PF09233 | IPR015314 |
| Endonuc-FokI_C |
Restriction endonuclease FokI, C terminal | PF09254 | IPR015334 |
| Endonuc-HincII |
Restriction endonuclease HincII | PF09226 | IPR015307 |
| Endonuc-MspI |
Restriction endonuclease MspI | PF09208 | IPR015291 |
| Endonuc-PvuII |
Restriction endonuclease PvuII | PF09225 | IPR015306 |
| Endonuclease_1 |
Endonuclease I | PF04231 | IPR007346 |
| Endonuclease_5 |
Endonuclease V | PF04493 | IPR007581 |
| Endonuclease_7 |
Recombination endonuclease VII | PF02945 | IPR004211 |
| Endonuclease_NS |
DNA/RNA non-specific endonuclease | PF01223 | IPR001604 |
| Endonuc_Holl |
Endonuclease related to archaeal Holliday junction resolvase | PF10107 | IPR019287 |
| Endonuc_subdom |
PI-PfuI Endonuclease subdomain | PF09062 | IPR015147 |
| Endostatin |
Collagenase NC10 and Endostatin | PF06482 | IPR010515 |
| Endosulfine |
cAMP-regulated phosphoprotein/endosulfine conserved region | PF04667 | IPR006760 |
| Endothelin |
Endothelin family | PF00322 | IPR001928 |
| Endotoxin_C |
delta endotoxin | PF03944 | IPR005638 |
| Endotoxin_M |
delta endotoxin | PF00555 | IPR015790 |
| Endotoxin_mid |
Bacillus thuringiensis delta-Endotoxin, middle domain | PF09131 | IPR015214 |
| Endotoxin_N |
delta endotoxin, N-terminal domain | PF03945 | IPR005639 |
| Engrail_1_C_sig |
Engrailed homeobox C-terminal signature domain | PF10525 | IPR019549 |
| Enhancin |
Viral enhancin protein | PF03272 | IPR004954 |
| ENOD40 |
ENOD40 protein | PF08247 | IPR013186 |
| ENOD93 |
Early nodulin 93 ENOD93 protein | PF03386 | IPR005050 |
| Enolase_C |
Enolase, C-terminal TIM barrel domain | PF00113 | IPR020810 |
| Enolase_N |
Enolase, N-terminal domain | PF03952 | IPR020811 |
| ENT |
ENT domain | PF03735 | IPR005491 |
| EntA_Immun |
Enterocin A Immunity | PF08951 | IPR015046 |
| Entericidin |
Entericidin EcnA/B family | PF08085 | IPR012556 |
| Enterotoxin_a |
Heat-labile enterotoxin alpha chain | PF01375 | IPR001144 |
| Enterotoxin_b |
Heat-labile enterotoxin beta chain | PF01376 | IPR001835 |
| Enterotoxin_HS1 |
Heat stable E.coli enterotoxin 1 | PF08090 | IPR012557 |
| Enterotoxin_ST |
Heat-stable enterotoxin ST | PF02048 | IPR001489 |
| ENTH |
ENTH domain | PF01417 | IPR001026 |
| Env-gp36 |
Env-gp36 lentivirus glycoprotein | PF09590 | IPR018582 |
| EnY2 |
Transcription factor e(y)2 | PF10163 | IPR018783 |
| Ependymin |
Ependymin | PF00811 | IPR001299 |
| Ephrin |
Ephrin | PF00812 | IPR001799 |
| Ephrin_lbd |
Ephrin receptor ligand binding domain | PF01404 | IPR001090 |
| Epimerase |
NAD dependent epimerase/dehydratase family | PF01370 | IPR001509 |
| Epimerase_2 |
UDP-N-acetylglucosamine 2-epimerase | PF02350 | IPR003331 |
| EPL1 |
Enhancer of polycomb-like | PF10513 | IPR019542 |
| EpoR_lig-bind |
Erythropoietin receptor, ligand binding | PF09067 | IPR015152 |
| EPO_TPO |
Erythropoietin/thrombopoietin | PF00758 | IPR001323 |
| EppA_BapA |
Exported protein precursor (EppA/BapA) | PF07268 | IPR009894 |
| Epsilon_antitox |
Bacterial epsilon antitoxin | PF08998 | IPR015090 |
| EPSP_synthase |
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) | PF00275 | IPR001986 |
| EPTP |
EPTP domain | PF03736 | IPR005492 |
| EPV_E5 |
Major transforming protein E5 family | PF08135 | IPR012555 |
| Equine_IAV_S2 |
Equine infectious anaemia virus S2 protein | PF06502 | IPR009480 |
| ER |
Enhancer of rudimentary | PF01133 | IPR000781 |
| ERCC4 |
ERCC4 domain | PF02732 | IPR006166 |
| ERF |
ERF superfamily | PF04404 | IPR007499 |
| eRF1_1 |
eRF1 domain 1 | PF03463 | IPR005140 |
| eRF1_2 |
eRF1 domain 2 | PF03464 | IPR005141 |
| eRF1_3 |
eRF1 domain 3 | PF03465 | IPR005142 |
| Erf4 |
Golgin subfamily A member 7/ERF4 family | PF10256 | IPR019383 |
| Erg28 |
Erg28 like protein | PF03694 | IPR005352 |
| ERG2_Sigma1R |
ERG2 and Sigma1 receptor like protein | PF04622 | IPR006716 |
| ERG4_ERG24 |
Ergosterol biosynthesis ERG4/ERG24 family | PF01222 | IPR001171 |
| ERM |
Ezrin/radixin/moesin family | PF00769 | IPR011259 |
| ErmC |
23S rRNA methylase leader peptide (ErmC) | PF06308 | IPR009391 |
| ERO1 |
Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | PF04137 | IPR007266 |
| ERp29 |
Endoplasmic reticulum protein ERp29, C-terminal domain | PF07749 | IPR011679 |
| ERp29_N |
ERp29, N-terminal domain | PF07912 | IPR012883 |
| Erp_C |
Erp protein C-terminus | PF06780 | IPR009618 |
| Erv26 |
Transmembrane adaptor Erv26 | PF04148 | IPR007277 |
| Erythro-docking |
Erythronolide synthase, docking | PF09277 | IPR015357 |
| Erythrovirus_X |
Erythrovirus X protein | PF06795 | IPR009629 |
| Erythro_esteras |
Erythromycin esterase | PF05139 | IPR007815 |
| Ery_res_leader1 |
Erythromycin resistance leader peptide | PF08051 | IPR012558 |
| Ery_res_leader2 |
Erythromycin resistance leader peptide | PF08057 | IPR012559 |
| ER_lumen_recept |
ER lumen protein retaining receptor | PF00810 | IPR000133 |
| Es2 |
Nuclear protein Es2 | PF09751 | IPR019148 |
| ESAG1 |
ESAG protein | PF03238 | IPR004922 |
| ESCRT-II |
ESCRT-II complex subunit | PF05871 | IPR008570 |
| EspA |
EspA-like secreted protein | PF03433 | IPR005095 |
| EspB |
Enterobacterial EspB protein | PF05802 | |
| EspF |
EspF protein repeat | PF04806 | IPR006891 |
| EspG |
EspG protein | PF06872 | IPR009669 |
| EssA |
Firmicute eSAT-6 protein secretion system EssA | PF10661 | IPR018920 |
| essB |
Predicted membrane protein essB | PF10140 | IPR018778 |
| ESSS |
ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) | PF10183 | IPR019329 |
| EST1 |
Telomerase activating protein Est1 | PF10374 | IPR019458 |
| EST1_DNA_bind |
Est1 DNA/RNA binding domain | PF10373 | IPR018834 |
| Est3 |
Telomerase holoenzyme, Est3 subunit | PF10341 | IPR019437 |
| Esterase |
Putative esterase | PF00756 | IPR000801 |
| Esterase_phd |
Esterase PHB depolymerase | PF10503 | |
| EsxB |
Virulence factor EsxB | PF10663 | IPR018921 |
| ET |
ET module | PF01684 | IPR002603 |
| ETC_C1_NDUFA4 |
ETC complex I subunit conserved region | PF04800 | IPR006885 |
| ETC_C1_NDUFA5 |
ETC complex I subunit conserved region | PF04716 | IPR006806 |
| ETF |
Electron transfer flavoprotein domain | PF01012 | IPR014730 |
| ETF_alpha |
Electron transfer flavoprotein FAD-binding domain | PF00766 | IPR014731 |
| ETF_QO |
Electron transfer flavoprotein-ubiquinone oxidoreductase | PF05187 | IPR007859 |
| EthD |
EthD protein | PF07110 | IPR009799 |
| Etmic-2 |
Microneme protein Etmic-2 | PF06670 | IPR009556 |
| ETRAMP |
Malarial early transcribed membrane protein (ETRAMP) | PF09716 | IPR006389 |
| Ets |
Ets-domain | PF00178 | IPR000418 |
| ETS_PEA3_N |
PEA3 subfamily ETS-domain transcription factor N terminal domain | PF04621 | IPR006715 |
| ETX_MTX2 |
Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 | PF03318 | |
| Euplotes_phero |
Euplotes octocarinatus mating pheromone protein | PF05842 | IPR008612 |
| EURL |
EURL protein | PF06937 | IPR009704 |
| EutA |
Ethanolamine utilisation protein EutA | PF06277 | IPR009377 |
| EutB |
Ethanolamine ammonia lyase large subunit (EutB) | PF06751 | IPR010628 |
| EutC |
Ethanolamine ammonia-lyase light chain (EutC) | PF05985 | IPR009246 |
| EutH |
Ethanolamine utilisation protein, EutH | PF04346 | IPR007441 |
| EutN_CcmL |
Ethanolamine utilisation protein EutN/carboxysome structural protein Ccml | PF03319 | IPR004992 |
| EutQ |
Ethanolamine utilisation protein EutQ | PF06249 | IPR010424 |
| EVI2A |
Ectropic viral integration site 2A protein (EVI2A) | PF05399 | IPR008608 |
| Evr1_Alr |
Erv1 / Alr family | PF04777 | IPR006863 |
| ExbD |
Biopolymer transport protein ExbD/TolR | PF02472 | IPR003400 |
| Exc |
Excisionase-like protein | PF07825 | IPR012884 |
| Excalibur |
Excalibur calcium-binding domain | PF05901 | IPR008613 |
| Exo70 |
Exo70 exocyst complex subunit | PF03081 | IPR004140 |
| ExoD |
Exopolysaccharide synthesis, ExoD | PF06055 | IPR010331 |
| Exonuc_VIII |
Enterobacterial exodeoxyribonuclease VIII | PF06630 | IPR010584 |
| Exonuc_VII_L |
Exonuclease VII, large subunit | PF02601 | IPR020579 |
| Exonuc_VII_S |
Exonuclease VII small subunit | PF02609 | IPR003761 |
| Exonuc_V_gamma |
Exodeoxyribonuclease V, gamma subunit | PF04257 | |
| Exonuc_X-T |
Exonuclease | PF00929 | IPR013520 |
| Exonuc_X-T_C |
Exonuclease C-terminal | PF08411 | IPR013620 |
| Exon_PolB |
Predicted 3'-5' exonuclease related to the exonuclease domain of PolB | PF10108 | IPR019288 |
| EXOSC1 |
Exosome component EXOSC1/CSL4 | PF10447 | IPR019495 |
| Exosortase_EpsH |
Transmembrane exosortase (Exosortase_EpsH) | PF09721 | IPR019127 |
| Exostosin |
Exostosin family | PF03016 | IPR004263 |
| Exotox-A_bind |
Exotoxin A binding | PF09101 | IPR015185 |
| Exotox-A_cataly |
Exotoxin A catalytic | PF09009 | IPR015099 |
| Exotox-A_target |
Exotoxin A, targeting | PF09102 | IPR015186 |
| ExoV |
ExoV-like protein | PF08871 | |
| Exo_endo_phos |
Endonuclease/Exonuclease/phosphatase family | PF03372 | IPR005135 |
| EXS |
EXS family | PF03124 | IPR004342 |
| ExsB |
ExsB | PF06508 | IPR018317 |
| Extensin-like_C |
Extensin-like protein C-terminus | PF06904 | IPR009683 |
| Extensin_1 |
Extensin-like protein repeat | PF02095 | IPR003883 |
| Extensin_2 |
Extensin-like region | PF04554 | IPR006706 |
| EzrA |
Septation ring formation regulator, EzrA | PF06160 | IPR010379 |
| E_Pc_C |
Enhancer of Polycomb C-terminus | PF06752 | IPR009607 |
| E_raikovi_mat |
Euplotes raikovi mating pheromone | PF06360 | IPR009064 |
