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Pfam ID Description Accession Interpro ID
1-cysPrx_C C-terminal domain of 1-Cys peroxiredoxin PF10417 IPR019479
14-3-3 14-3-3 protein PF00244 IPR000308
2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF00389 IPR006139
2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF02826 IPR006140
2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF00198 IPR001078
2-ph_phosp 2-phosphosulpholactate phosphatase PF04029 IPR005238
2CSK_N Two-component sensor kinase N-terminal PF08521 IPR013727
2C_adapt 2-cysteine adaptor domain PF08793 IPR014901
2H-phosphodiest Domain of unknown function (DUF1868) PF08975 IPR015069
2HCT 2-hydroxycarboxylate transporter family PF03390 IPR004679
2OG-FeII_Oxy 2OG-Fe(II) oxygenase superfamily PF03171 IPR005123
2_5_RNA_ligase 2',5' RNA ligase family PF02834 IPR014051
3-alpha 3-alpha domain PF03475 IPR005163
3-dmu-9_3-mt 3-demethylubiquinone-9 3-methyltransferase PF06983
3-HAO 3-hydroxyanthranilic acid dioxygenase PF06052 IPR010329
3A 3A/RNA2 movement protein family PF00803 IPR000603
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family PF01073 IPR002225
3D 3D domain PF06725 IPR010611
3H 3H domain PF02829 IPR004173
3HBOH 3HB-oligomer hydrolase (3HBOH) PF10605 IPR016582
3HCDH 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF00725 IPR006108
3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF02737 IPR006176
3_5_exonuc 3'-5' exonuclease PF01612 IPR002562
4F5 4F5 protein family PF04419 IPR007513
4HBT Thioesterase superfamily PF03061 IPR006683
4_1_CTD 4.1 protein C-terminal domain (CTD) PF05902 IPR008379
5-FTHF_cyc-lig 5-formyltetrahydrofolate cyclo-ligase family PF01812 IPR002698
5-nucleotidase 5'-nucleotidase PF06189 IPR010394
53-BP1_Tudor Tumour suppressor p53-binding protein-1 Tudor PF09038 IPR015125
5HT_transporter Serotonin (5-HT) neurotransmitter transporter, N-terminus PF03491 IPR013086
5TM-5TMR_LYT 5TMR of 5TMR-LYT PF07694 IPR011620
5_3_exonuc 5'-3' exonuclease, C-terminal SAM fold PF01367 IPR020047
5_3_exonuc_N 5'-3' exonuclease, N-terminal resolvase-like domain PF02739 IPR020046
5_nucleotid 5' nucleotidase family PF05761 IPR008380
5_nucleotid_C 5'-nucleotidase, C-terminal domain PF02872 IPR008334
60KD_IMP 60Kd inner membrane protein PF02096 IPR001708
6PF2K 6-phosphofructo-2-kinase PF01591 IPR013079
6PGD 6-phosphogluconate dehydrogenase, C-terminal domain PF00393 IPR006114
7kD_coat 7kD viral coat protein PF02495 IPR003411
7kD_DNA_binding 7kD DNA-binding domain PF02294 IPR003212
7TM-7TMR_HD 7TM receptor with intracellular HD hydrolase PF07698 IPR011621
7TMR-DISMED2 7TMR-DISM extracellular 2 PF07696 IPR011622
7TMR-DISM_7TM 7TM diverse intracellular signalling PF07695 IPR011623
7TMR-HDED 7TM-HD extracellular PF07697 IPR011624
7tm_1 7 transmembrane receptor (rhodopsin family) PF00001 IPR000276
7tm_2 7 transmembrane receptor (Secretin family) PF00002 IPR000832
7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR PF00003 IPR017978
7tm_6 7tm Odorant receptor PF02949 IPR004117
7tm_7 7tm Chemosensory receptor PF08395 IPR013604
7TM_GPCR_Sra Serpentine type 7TM GPCR chemoreceptor Sra PF02117 IPR000344
7TM_GPCR_Srab Serpentine type 7TM GPCR receptor class ab chemoreceptor PF10292 IPR019408
7TM_GPCR_Srb Serpentine type 7TM GPCR chemoreceptor Srb PF02175 IPR002184
7TM_GPCR_Srbc Serpentine type 7TM GPCR chemoreceptor Srbc PF10316 IPR019420
7TM_GPCR_Srd Serpentine type 7TM GPCR chemoreceptor Srd PF10317 IPR019421
7TM_GPCR_Srh Serpentine type 7TM GPCR chemoreceptor Srh PF10318 IPR019422
7TM_GPCR_Sri Serpentine type 7TM GPCR chemoreceptor Sri PF10327 IPR019429
7TM_GPCR_Srj Serpentine type 7TM GPCR chemoreceptor Srj PF10319 IPR019423
7TM_GPCR_Srsx Serpentine type 7TM GPCR chemoreceptor Srsx PF10320 IPR019424
7TM_GPCR_Srt Serpentine type 7TM GPCR chemoreceptor Srt PF10321 IPR019425
7TM_GPCR_Sru Serpentine type 7TM GPCR chemoreceptor Sru PF10322 IPR003839
7TM_GPCR_Srv Serpentine type 7TM GPCR chemoreceptor Srv PF10323 IPR019426
7TM_GPCR_Srw Serpentine type 7TM GPCR chemoreceptor Srw PF10324 IPR019427
7TM_GPCR_Srx Serpentine type 7TM GPCR chemoreceptor Srx PF10328 IPR019430
7TM_GPCR_Srz Serpentine type 7TM GPCR chemoreceptor Srz PF10325 IPR018817
7TM_GPCR_Str Serpentine type 7TM GPCR chemoreceptor Srt PF10326 IPR019428
A-2_8-polyST Alpha-2,8-polysialyltransferase (POLYST) PF07388 IPR010866
A1_Propeptide A1 Propeptide PF07966 IPR012848
A2L_zn_ribbon A2L zinc ribbon domain PF08792 IPR014900
A2M Alpha-2-macroglobulin family PF00207 IPR001599
A2M_comp A-macroglobulin complement component PF07678 IPR011626
A2M_N Alpha-2-macroglobulin family N-terminal region PF01835 IPR002890
A2M_N_2 Alpha-2-macroglobulin family N-terminal region PF07703 IPR011625
A2M_recep A-macroglobulin receptor PF07677 IPR009048
A4_EXTRA Amyloid A4 extracellular domain PF02177 IPR008154
AAA ATPase family associated with various cellular activities (AAA) PF00004 IPR003959
AAA-ATPase_like Predicted AAA-ATPase PF09820 IPR018631
AAA_2 ATPase family associated with various cellular activities (AAA) PF07724 IPR013093
AAA_3 ATPase family associated with various cellular activities (AAA) PF07726 IPR011703
AAA_4 Divergent AAA domain PF04326 IPR007421
AAA_5 ATPase family associated with various cellular activities (AAA) PF07728 IPR011704
AAA_PrkA PrkA AAA domain PF08298 IPR013153
AalphaY_MDB Mating type protein A alpha Y mating type dependent binding region PF04611 IPR007689
AAL_decarboxy Alpha-acetolactate decarboxylase PF03306 IPR005128
AAR2 AAR2 protein PF05282 IPR007946
AARP2CN AARP2CN (NUC121) domain PF08142 IPR012948
AAT Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase PF03417 IPR005079
AATase Alcohol acetyltransferase PF07247 IPR010828
AA_kinase Amino acid kinase family PF00696 IPR001048
AA_permease Amino acid permease PF00324 IPR004841
AA_permease_N Amino acid permease N-terminal PF08403 IPR013612
Aa_trans Transmembrane amino acid transporter protein PF01490 IPR013057
ABA_WDS ABA/WDS induced protein PF02496 IPR003496
ABC-3 ABC 3 transport family PF00950 IPR001626
ABC1 ABC1 family PF03109 IPR004147
ABC2_membrane ABC-2 type transporter PF01061 IPR013525
ABC_ATPase Predicted ATPase of the ABC class PF09818 IPR019195
ABC_cobalt ABC-type cobalt transport system, permease component PF09819 IPR017195
ABC_membrane ABC transporter transmembrane region PF00664 IPR001140
ABC_membrane_2 ABC transporter transmembrane region 2 PF06472 IPR010509
ABC_sub_bind ABC transporter substrate binding protein PF04392 IPR007487
ABC_tran ABC transporter PF00005 IPR003439
ABC_transp ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit PF09821 IPR018632
ABC_transp_aux ABC-type uncharacterized transport system PF09822 IPR019196
AbfB Alpha-L-arabinofuranosidase B (ABFB) PF05270 IPR007934
ABG_transport AbgT putative transporter family PF03806 IPR004697
Abhydrolase_1 alpha/beta hydrolase fold PF00561 IPR000073
Abhydrolase_2 Phospholipase/Carboxylesterase PF02230 IPR003140
Abhydrolase_3 alpha/beta hydrolase fold PF07859 IPR013094
Abhydrolase_4 TAP-like protein PF08386 IPR013595
Abhydro_lipase ab-hydrolase associated lipase region PF04083 IPR006693
Abi CAAX amino terminal protease family PF02517 IPR003675
Abi_2 Abi-like protein PF07751 IPR011664
Abi_HHR Abl-interactor HHR PF07815 IPR012849
ABM Antibiotic biosynthesis monooxygenase PF03992 IPR007138
Abp2 ARS binding protein 2 PF09441 IPR018562
ACBP Acyl CoA binding protein PF00887 IPR000582
ACCA Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PF03255 IPR020582
ACC_central Acetyl-CoA carboxylase, central region PF08326 IPR013537
AceK Isocitrate dehydrogenase kinase/phosphatase (AceK) PF06315 IPR010452
Acetate_kinase Acetokinase family PF00871 IPR000890
AcetDehyd-dimer Prokaryotic acetaldehyde dehydrogenase, dimerisation PF09290 IPR015426
Acetone_carb_G Acetone carboxylase gamma subunit PF08882 IPR014979
AcetylCoA_hydro Acetyl-CoA hydrolase/transferase N-terminal domain PF02550 IPR003702
Acetyltransf_1 Acetyltransferase (GNAT) family PF00583 IPR022610
Acetyltransf_2 N-acetyltransferase PF00797 IPR001447
AChE_tetra Acetylcholinesterase tetramerisation domain PF08674 IPR014788
Acid_phosphat_A Histidine acid phosphatase PF00328 IPR000560
Acid_phosphat_B HAD superfamily, subfamily IIIB (Acid phosphatase) PF03767 IPR005519
ACN9 ACN9 family PF05882
Aconitase Aconitase family (aconitate hydratase) PF00330 IPR001030
Aconitase_2_N Aconitate hydratase 2 N-terminus PF06434 IPR015929
Aconitase_C Aconitase C-terminal domain PF00694 IPR000573
ACOX Acyl-CoA oxidase PF01756 IPR002655
Acp26Ab Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) PF05777 IPR008392
ACP53EA Drosophila ACP53EA protein PF06313 IPR009392
ACPS 4'-phosphopantetheinyl transferase superfamily PF01648 IPR008278
ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF08545 IPR013751
ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PF08541 IPR013747
ACR_tran AcrB/AcrD/AcrF family PF00873 IPR001036
ACT ACT domain PF01842 IPR002912
Act-Frag_cataly Actin-fragmin kinase, catalytic PF09192 IPR015275
ActA ActA Protein PF05058 IPR007752
ACTH_domain Corticotropin ACTH domain PF00976 IPR013531
Actin Actin PF00022 IPR004000
Activin_recp Activin types I and II receptor domain PF01064 IPR000472
Acyl-ACP_TE Acyl-ACP thioesterase PF01643 IPR002864
Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain PF00441 IPR006090
Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain PF08028 IPR013107
Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain PF02770 IPR006091
Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain PF02771 IPR006092
Acylphosphatase Acylphosphatase PF00708 IPR001792
Acyltransferase Acyltransferase PF01553 IPR002123
Acyl_CoA_thio Acyl-CoA thioesterase PF02551 IPR003703
Acyl_transf_1 Acyl transferase domain PF00698 IPR014043
Acyl_transf_2 Acyl transferase PF02273 IPR003157
Acyl_transf_3 Acyltransferase family PF01757 IPR002656
AD Anticodon-binding domain PF09793 IPR019181
Ada3 Histone acetyltransferases subunit 3 PF10198 IPR019340
ADAM_CR ADAM cysteine-rich PF08516 IPR006586
ADAM_spacer1 ADAM-TS Spacer 1 PF05986 IPR010294
Adaptin_binding Alpha and gamma adaptin binding protein p34 PF10199 IPR019341
Adaptin_N Adaptin N terminal region PF01602 IPR002553
Adap_comp_sub Adaptor complexes medium subunit family PF00928 IPR008968
Ada_Zn_binding Metal binding domain of Ada PF02805 IPR004026
ADC Acetoacetate decarboxylase (ADC) PF06314 IPR010451
ADC_lyase Aminodeoxychorismate lyase PF02618 IPR003770
Adenine_glyco Methyladenine glycosylase PF03352 IPR005019
Adenosine_kin Adenosine specific kinase PF04008 IPR007153
Adeno_100 Late 100kD protein PF02438 IPR003381
Adeno_52K Adenoviral protein 52K PF03052 IPR004292
Adeno_E1A Early E1A protein PF02703 IPR003853
Adeno_E1B_19K Adenovirus E1B 19K protein / small t-antigen PF01691 IPR002924
Adeno_E1B_55K Adenovirus EB1 55K protein / large t-antigen PF01696 IPR002612
Adeno_E1B_55K_N Adenovirus E1B protein N-terminus PF04623 IPR006717
Adeno_E3 Adenovirus E3 protein PF06040 IPR009266
Adeno_E3A Adenovirus E3A PF05248 IPR007912
Adeno_E3B Adenovirus E3B protein PF03376 IPR005041
Adeno_E3_14_5 Early E3 14.5 kDa protein PF04834 IPR008131
Adeno_E3_15_3 Adenovirus 15.3kD protein in E3 region PF03307 IPR004985
Adeno_E3_CR1 Adenovirus E3 region protein CR1 PF02440 IPR003471
Adeno_E3_CR2 Adenovirus E3 region protein CR2 PF02439 IPR003470
Adeno_E4 Mastadenovirus early E4 13 kDa protein PF05385 IPR008680
Adeno_E4_34 Adenovirus early E4 34 kDa protein conserved region PF04528 IPR007615
Adeno_E4_ORF3 Mastadenovirus E4 ORF3 protein PF06931 IPR009699
Adeno_GP19K Adenovirus GP19K PF04881 IPR006965
Adeno_hexon Hexon, adenovirus major coat protein, N-terminal domain PF01065 IPR016107
Adeno_hexon_C Hexon, adenovirus major coat protein, C-terminal domain PF03678 IPR016108
Adeno_IVa2 Adenovirus IVa2 protein PF02456 IPR003389
Adeno_knob Adenoviral fibre protein (knob domain) PF00541 IPR000978
Adeno_Penton_B Adenovirus penton base protein PF01686 IPR002605
Adeno_PIX Adenovirus hexon-associated protein (IX) PF03955 IPR005641
Adeno_PV Adenovirus minor core protein PV PF03910 IPR005608
Adeno_PVIII Adenovirus hexon associated protein, protein VIII PF01310 IPR000646
Adeno_PX Adenovirus late L2 mu core protein (Protein X) PF05829 IPR008393
Adeno_shaft Adenoviral fibre protein (repeat/shaft region) PF00608 IPR000939
Adeno_terminal Adenoviral DNA terminal protein PF02459 IPR003391
Adeno_VII Adenoviral core protein VII PF03228 IPR004912
Adenylate_cycl Adenylate cyclase, class-I PF01295 IPR000274
Adenylsucc_synt Adenylosuccinate synthetase PF00709 IPR001114
Adenyl_transf Streptomycin adenylyltransferase PF04439 IPR007530
Adhes-Ig_like Adhesion molecule, immunoglobulin-like PF09085 IPR015169
Adhesin_Dr Dr-family adhesin PF04619 IPR006713
Adhesin_P1 Mycoplasma adhesin P1 PF03257 IPR004940
ADH_N Alcohol dehydrogenase GroES-like domain PF08240 IPR013154
adh_short short chain dehydrogenase PF00106 IPR002198
ADH_zinc_N Zinc-binding dehydrogenase PF00107 IPR013149
Adipokin_hormo Adipokinetic hormone PF06377 IPR010475
ADK Adenylate kinase PF00406 IPR000850
ADK_lid Adenylate kinase, active site lid PF05191 IPR007862
AdoHcyase S-adenosyl-L-homocysteine hydrolase PF05221 IPR000043
AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF00670 IPR015878
AdoMetDC_leader S-adenosyl-l-methionine decarboxylase leader peptide PF08132 IPR012511
AdoMet_dc S-adenosylmethionine decarboxylase PF02675 IPR003826
AdoMet_MTase Predicted AdoMet-dependent methyltransferase PF07757 IPR011671
AdoMet_Synthase S-adenosylmethionine synthetase (AdoMet synthetase) PF01941 IPR002795
ADP_PFK_GK ADP-specific Phosphofructokinase/Glucokinase conserved region PF04587 IPR007666
ADP_ribosyl_GH ADP-ribosylglycohydrolase PF03747 IPR005502
Adrenomedullin Adrenomedullin PF02039
ADSL_C Adenylosuccinate lyase C-terminus PF10397 IPR019468
Ad_cyc_g-alpha Adenylate cyclase G-alpha binding domain PF08509 IPR013716
Aegerolysin Aegerolysin PF06355 IPR009413
Aerolysin Aerolysin toxin PF01117 IPR005830
AF-4 AF-4 proto-oncoprotein PF05110 IPR007797
AfaD Enterobacteria AfaD invasin protein PF05775 IPR008394
AFG1_ATPase AFG1-like ATPase PF03969 IPR005654
AflR Aflatoxin regulatory protein PF08493 IPR013700
AFOR_C Aldehyde ferredoxin oxidoreductase, domains 2 & 3 PF01314 IPR001203
AFOR_N Aldehyde ferredoxin oxidoreductase, N-terminal domain PF02730 IPR013983
AFP Insect antifreeze protein repeat PF02420 IPR003460
AfsA A-factor biosynthesis repeat PF03756 IPR005509
AFT Transcription factor AFT PF08731 IPR014842
Ag332 Erythrocyte membrane-associated giant protein antigen 332 PF04671 IPR006763
Agenet Agenet domain PF05641 IPR008395
Agglutinin Agglutinin PF07468 IPR008998
Agouti Agouti protein PF05039 IPR007733
Ago_hook Argonaute hook PF10427 IPR019486
AgrB Accessory gene regulator B PF04647 IPR006741
AgrD Staphylococcal AgrD protein PF05931 IPR009229
Agro_virD5 Agrobacterium VirD5 protein PF04730 IPR006819
AGTRAP Angiotensin II, type I receptor-associated protein (AGTRAP) PF06396 IPR009436
Aha1_N Activator of Hsp90 ATPase, N-terminal PF09229 IPR015310
AhpC-TSA AhpC/TSA family PF00578 IPR000866
AHS1 Allophanate hydrolase subunit 1 PF02682 IPR003833
AHS2 Allophanate hydrolase subunit 2 PF02626 IPR003778
AHSA1 Activator of Hsp90 ATPase homolog 1-like protein PF08327 IPR013538
AHSP Alpha-haemoglobin stabilising protein PF09236 IPR015317
AICARFT_IMPCHas AICARFT/IMPCHase bienzyme PF01808 IPR013982
AIG1 AIG1 family PF04548 IPR006703
AIG2 AIG2-like family PF06094 IPR009288
Ail_Lom Enterobacterial Ail/Lom protein PF06316 IPR000758
AIP3 Actin interacting protein 3 PF03915
AIPR AIPR protein PF10592 IPR018891
AIRC AIR carboxylase PF00731 IPR000031
AIRS AIR synthase related protein, N-terminal domain PF00586 IPR000728
AIRS_C AIR synthase related protein, C-terminal domain PF02769 IPR010918
AKAP7_NLS Protein kinase A anchor protein nuclear localisation signal PF10469 IPR019510
AKAP7_RIRII_bdg PKA-RI-RII subunit binding domain of A-kinase anchor protein PF10470 IPR019511
AKAP95 A-kinase anchoring protein 95 (AKAP95) PF04988 IPR007071
AKAP_110 A-kinase anchor protein 110 kDa (AKAP 110) PF05716 IPR018292
ALAD Delta-aminolevulinic acid dehydratase PF00490 IPR001731
AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain PF01262 IPR007698
AlaDh_PNT_N Alanine dehydrogenase/PNT, N-terminal domain PF05222 IPR007886
Ala_racemase_C Alanine racemase, C-terminal domain PF00842 IPR011079
Ala_racemase_N Alanine racemase, N-terminal domain PF01168 IPR001608
Alb1 Alb1 PF09135
Alba Alba PF01918 IPR002775
Albicidin_res Albicidin resistance domain PF05583
Albumin_I Albumin I PF08027 IPR012512
AlcB Siderophore biosynthesis protein domain PF10331 IPR019432
Aldedh Aldehyde dehydrogenase family PF00171 IPR015590
Aldolase KDPG and KHG aldolase PF01081 IPR000887
Aldolase_II Class II Aldolase and Adducin N-terminal domain PF00596 IPR001303
Aldose_epim Aldose 1-epimerase PF01263 IPR008183
Aldo_ket_red Aldo/keto reductase family PF00248 IPR001395
Ald_Xan_dh_C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PF01315 IPR000674
Ald_Xan_dh_C2 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain PF02738 IPR008274
ALF Short repeats of unknown function PF03752 IPR005506
Alg14 Oligosaccharide biosynthesis protein Alg14 like PF08660 IPR013969
ALG3 ALG3 protein PF05208 IPR007873
Alg6_Alg8 ALG6, ALG8 glycosyltransferase family PF03155 IPR004856
Alginate_lyase Alginate lyase PF05426
Alginate_lyase2 Alginate lyase PF08787 IPR014895
AlkA_N AlkA N-terminal domain PF06029 IPR010316
Alk_phosphatase Alkaline phosphatase PF00245 IPR001952
Allantoicase Allantoicase repeat PF03561 IPR015908
Allatostatin Allatostatin PF05953 IPR010276
Allene_ox_cyc Allene oxide cyclase PF06351 IPR009410
Allexi_40kDa Allexivirus 40kDa protein PF05549 IPR008398
Alliinase_C Allinase PF04864 IPR006948
ALO D-arabinono-1,4-lactone oxidase PF04030 IPR007173
Alpha-2-MRAP_C Alpha-2-macroglobulin RAP, C-terminal domain PF06401 IPR010483
Alpha-2-MRAP_N Alpha-2-macroglobulin RAP, N-terminal domain PF06400 IPR009066
Alpha-amylase Alpha amylase, catalytic domain PF00128 IPR006047
Alpha-amylase_C Alpha amylase, C-terminal all-beta domain PF02806 IPR006048
Alpha-amylase_N Alpha amylase, N-terminal ig-like domain PF02903 IPR004185
Alpha-amyl_C Alpha-amylase, C terminal PF09071 IPR015156
Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet domain PF07821 IPR012850
Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus PF06964 IPR010720
Alpha-mann_mid Alpha mannosidase, middle domain PF09261 IPR015341
AlphaC_N Alpha C protein N terminal PF08829 IPR014933
Alpha_adaptinC2 Adaptin C-terminal domain PF02883 IPR008152
Alpha_adaptin_C Alpha adaptin AP2, C-terminal domain PF02296 IPR003164
Alpha_E1_glycop Alphavirus E1 glycoprotein PF01589 IPR002548
Alpha_E2_glycop Alphavirus E2 glycoprotein PF00943 IPR000936
Alpha_E3_glycop Alphavirus E3 glycoprotein PF01563 IPR002533
Alpha_GJ Alphavirus glycoprotein J PF03229 IPR004913
Alpha_kinase Alpha-kinase family PF02816 IPR004166
Alpha_L_fucos Alpha-L-fucosidase PF01120 IPR000933
Alpha_TIF Alpha trans-inducing protein (Alpha-TIF) PF02232 IPR003174
Alph_Pro_TM Putative transmembrane protein (Alph_Pro_TM) PF09608 IPR019088
ALS_ss_C Small subunit of acetolactate synthase PF10369 IPR019455
Alum_res Aluminium resistance protein PF06838 IPR009651
AMA-1 Apical membrane antigen 1 PF02430 IPR003298
Amastin Amastin surface glycoprotein PF07344 IPR009944
Amb_V_allergen Amb V Allergen PF03913 IPR005611
Amelin Ameloblastin precursor (Amelin) PF05111 IPR007798
Amelogenin Amelogenin PF02948 IPR004116
AMH_N Anti-Mullerian hormone, N terminal region PF04709 IPR006799
Amidase Amidase PF01425 IPR000120
Amidase_2 N-acetylmuramoyl-L-alanine amidase PF01510 IPR002502
Amidase_3 N-acetylmuramoyl-L-alanine amidase PF01520 IPR002508
Amidase_5 Bacteriophage peptidoglycan hydrolase PF05382 IPR008044
Amidinotransf Amidinotransferase PF02274 IPR003198
Amidohydro_1 Amidohydrolase family PF01979 IPR006680
Amidohydro_2 Amidohydrolase PF04909 IPR006992
Amidohydro_3 Amidohydrolase family PF07969 IPR013108
Amido_AtzD_TrzD Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) PF09663 IPR014086
Aminoglyc_resit Aminoglycoside-2''-adenylyltransferase PF10706 IPR019646
Aminotran_1_2 Aminotransferase class I and II PF00155 IPR004839
Aminotran_3 Aminotransferase class-III PF00202 IPR005814
Aminotran_4 Aminotransferase class IV PF01063 IPR001544
Aminotran_5 Aminotransferase class-V PF00266 IPR000192
Amino_oxidase Flavin containing amine oxidoreductase PF01593 IPR002937
AmiS_UreI AmiS/UreI family transporter PF02293 IPR003211
AMMECR1 AMMECR1 PF01871 IPR002733
Ammonium_transp Ammonium Transporter Family PF00909 IPR001905
AMNp_N Bacterial AMP nucleoside phosphorylase N-terminus PF10423 IPR018953
AMO Ammonia monooxygenase PF02461 IPR003393
AmoA Putative ammonia monooxygenase PF05145 IPR007820
AmoC Ammonia monooxygenase/methane monooxygenase, subunit C PF04896 IPR006980
AMOP AMOP domain PF03782 IPR005533
AMP-binding AMP-binding enzyme PF00501 IPR000873
AMPKBI 5'-AMP-activated protein kinase, beta subunit, complex-interacting region PF04739 IPR006828
AMP_N Aminopeptidase P, N-terminal domain PF05195 IPR007865
ANATO Anaphylotoxin-like domain PF01821 IPR000020
Androgen_recep Androgen receptor PF02166 IPR001103
Anemone_cytotox Sea anemone cytotoxic protein PF06369 IPR009104
AnfG_VnfG Vanadium/alternative nitrogenase delta subunit PF03139 IPR004349
AnfO_nitrog Iron only nitrogenase protein AnfO (AnfO_nitrog) PF09582 IPR014287
ANF_receptor Receptor family ligand binding region PF01094 IPR001828
Ank Ankyrin repeat PF00023 IPR002110
ANKH Progressive ankylosis protein (ANKH) PF07260 IPR009887
Annexin Annexin PF00191 IPR018502
Anophelin Thrombin inhibitor from mosquito PF10731 IPR018932
ANP Atrial natriuretic peptide PF00212 IPR000663
Anp1 Anp1 PF03452 IPR005109
ANT Phage antirepressor protein KilAC domain PF03374 IPR005039
AntA AntA/AntB antirepressor PF08346 IPR013557
ANTAR ANTAR domain PF03861 IPR005561
ANTH ANTH domain PF07651 IPR011417
Anthrax-tox_M Anthrax toxin lethal factor, middle domain PF09156 IPR015239
Anthrax_toxA Anthrax toxin LF subunit PF03497 IPR005165
Anth_Ig Anthrax receptor extracellular domain PF05587 IPR008400
Anth_synt_I_N Anthranilate synthase component I, N terminal region PF04715 IPR006805
Anti-adapt_IraP Sigma-S stabilisation anti-adaptor protein PF10796 IPR019732
Antibiotic_NAT Aminoglycoside 3-N-acetyltransferase PF02522 IPR003679
Anticodon_1 Anticodon-binding domain PF08264 IPR013155
Antig_Caf1 Caf1 Capsule antigen PF09255 IPR015335
Antimicrobial10 Metchnikowin family PF08105 IPR012513
Antimicrobial11 Formaecin family PF08106 IPR012514
Antimicrobial12 Pleurocidin family PF08107 IPR012515
Antimicrobial13 Halocidin family PF08108 IPR012516
Antimicrobial14 Lactocin 705 family PF08109 IPR012517
Antimicrobial15 Ocellatin family PF08110 IPR012518
Antimicrobial16 Double glycine cleavage site bacteriolysin PF08128
Antimicrobial17 Alpha/beta enterocin family PF08129 IPR012950
Antimicrobial18 Type A lantibiotic family PF08130 IPR012519
Antimicrobial19 Pseudin antimicrobial peptide PF08225 IPR013156
Antimicrobial20 Aurein-like antibiotic peptide PF08256 IPR013157
Antimicrobial_1 Frog antimicrobial peptide PF08018 IPR012520
Antimicrobial_2 Frog antimicrobial peptide PF08023 IPR012521
Antimicrobial_3 Spider antimicrobial peptide PF08025 IPR012522
Antimicrobial_4 Ant antimicrobial peptide PF08024 IPR012523
Antimicrobial_5 Bee antimicrobial peptide PF08026 IPR012524
Antimicrobial_6 Diapausin family of antimicrobial peptide PF08036 IPR012525
Antimicrobial_7 Scorpion antimicrobial peptide PF08102 IPR012526
Antimicrobial_8 Uperin family PF08103 IPR012527
Antimicrobial_9 Ponericin L family PF08104 IPR012528
Antirestrict Antirestriction protein PF03230 IPR004914
Antistasin Antistasin family PF02822 IPR004094
Antiterm Antitermination protein PF03589 IPR003222
Ant_C Anthrax receptor C-terminus region PF05586 IPR008399
An_peroxidase Animal haem peroxidase PF03098 IPR002007
AOX Alternative oxidase PF01786 IPR002680
AP2 AP2 domain PF00847 IPR001471
ApbA Ketopantoate reductase PanE/ApbA PF02558 IPR013332
ApbA_C Ketopantoate reductase PanE/ApbA C terminal PF08546 IPR013752
ApbE ApbE family PF02424 IPR003374
APC10 Anaphase-promoting complex, subunit 10 (APC10) PF03256 IPR004939
Apc13p Apc13p protein PF05839 IPR008401
Apc15p Apc15p protein PF05841 IPR008402
APC2 Anaphase promoting complex (APC) subunit 2 PF08672 IPR014786
APC8 Anaphase promoting complex subunit 8 / Cdc23 PF04049 IPR007192
APC_15aa APC 15 residue motif PF05972 IPR009240
APC_basic APC basic domain PF05956 IPR009234
APC_CDC26 Anaphase-promoting complex APC subunit PF10471 IPR018860
APC_crr APC cysteine-rich region PF05923 IPR009223
APG12 Ubiquitin-like autophagy protein Apg12 PF04110 IPR007242
APG17 Autophagy protein Apg17 PF04108 IPR007240
APG5 Autophagy protein Apg5 PF04106 IPR007239
APG6 Autophagy protein Apg6 PF04111 IPR007243
APG9 Autophagy protein Apg9 PF04109 IPR007241
APH Phosphotransferase enzyme family PF01636 IPR002575
Aph-1 Aph-1 protein PF06105 IPR009294
aPHC Alkaline phytoceramidase (aPHC) PF05875 IPR008901
APH_6_hur Aminoglycoside/hydroxyurea antibiotic resistance kinase PF04655 IPR006748
API5 Apoptosis inhibitory protein 5 (API5) PF05918 IPR008383
Apidaecin Apidaecin PF00807 IPR004828
Apo-CII Apolipoprotein C-II PF05355 IPR008019
Apo-CIII Apolipoprotein CIII (Apo-CIII) PF05778 IPR008403
Apo-VLDL-II Apovitellenin I (Apo-VLDL-II) PF05418 IPR008404
ApoA-II Apolipoprotein A-II (ApoA-II) PF04711 IPR006801
APOBEC_C APOBEC-like C-terminal domain PF05240 IPR007904
APOBEC_N APOBEC-like N-terminal domain PF08210 IPR013158
ApoC-I Apolipoprotein C-I (ApoC-1) PF04691 IPR006781
Apocytochr_F_C Apocytochrome F, C-terminal PF01333 IPR002325
ApoL Apolipoprotein L PF05461 IPR008405
Apolipoprotein Apolipoprotein A1/A4/E domain PF01442 IPR000074
ApoLp-III Apolipophorin-III precursor (apoLp-III) PF07464 IPR010009
ApoO Apolipoprotein O PF09769 IPR019166
APP_amyloid beta-amyloid precursor protein C-terminus PF10515 IPR019543
APS_kinase Adenylylsulphate kinase PF01583 IPR002891
APT Aerolysin/Pertussis toxin (APT) domain PF03440 IPR005138
Apt1 Golgi-body localisation protein domain PF10351 IPR019443
Apyrase Apyrase PF06079 IPR009283
AP_endonuc_2 Xylose isomerase-like TIM barrel PF01261 IPR012307
AP_endonuc_2_N AP endonuclease family 2 C terminus PF07582 IPR011418
ArabFuran-catal Alpha-L-arabinofuranosidase B, catalytic PF09206 IPR015289
Arabinose_Isome L-arabinose isomerase PF02610 IPR003762
Arabinose_trans Mycobacterial cell wall arabinan synthesis protein PF04602 IPR007680
AraC_binding AraC-like ligand binding domain PF02311
AraC_E_bind Bacterial transcription activator, effector binding domain PF06445 IPR010499
AraC_N AraC-type transcriptional regulator N-terminus PF06719 IPR009594
Arb1 Argonaute siRNA chaperone (ARC) complex subunit Arb1 PF09692 IPR018606
Arb2 Arb2 domain PF09757 IPR019154
Arc Arc-like DNA binding domain PF03869 IPR005569
ARC105_Med_act ARC105 domain PF09606 IPR019087
Arc32 Mediator of RNA polymerase II transcription PF10232 IPR019364
Arch_ATPase Archaeal ATPase PF01637 IPR011579
Arch_flagellin Archaebacterial flagellin PF01917 IPR002774
Arch_fla_DE Archaeal flagella protein PF04659 IPR006752
Arc_PepC Archaeal Peptidase A24 C-terminal Domain PF06819 IPR009639
Arc_PepC_II Archaeal Peptidase A24 C-terminus Type II PF06847 IPR009655
Arc_trans_TRASH Archaeal TRASH domain PF08394 IPR013603
ARD ARD/ARD' family PF03079 IPR004313
ArdA Antirestriction protein (ArdA) PF07275 IPR009899
AreA_N Nitrogen regulatory protein AreA N terminus PF07573 IPR011420
Arena_glycoprot Arenavirus glycoprotein PF00798 IPR001535
Arena_nucleocap Arenavirus nucleocapsid protein PF00843 IPR000229
Arena_RNA_pol Arenavirus RNA polymerase PF06317 IPR010453
Arf ADP-ribosylation factor family PF00025 IPR006689
Arfaptin Arfaptin-like domain PF06456 IPR010504
ArfGap Putative GTPase activating protein for Arf PF01412 IPR001164
Arginase Arginase family PF00491 IPR006035
Arginosuc_synth Arginosuccinate synthase PF00764 IPR001518
ArgJ ArgJ family PF01960 IPR002813
ArgK ArgK protein PF03308 IPR005129
Arg_repressor Arginine repressor, DNA binding domain PF01316
Arg_repressor_C Arginine repressor, C-terminal domain PF02863 IPR020899
Arg_tRNA_synt_N Arginyl tRNA synthetase N terminal domain PF03485 IPR005148
ARID ARID/BRIGHT DNA binding domain PF01388 IPR001606
Arif-1 Actin-rearrangement-inducing factor (Arif-1) PF06770 IPR010639
Arm Armadillo/beta-catenin-like repeat PF00514 IPR000225
Armet Degradation arginine-rich protein for mis-folding PF10208 IPR019345
ARM_1 Adhesion regulating molecule conserved region PF04683 IPR006773
AroM AroM protein PF07302 IPR010843
ARPC4 ARP2/3 complex 20 kDa subunit (ARPC4) PF05856 IPR008384
Arrestin_C Arrestin (or S-antigen), C-terminal domain PF02752 IPR011022
Arrestin_N Arrestin (or S-antigen), N-terminal domain PF00339 IPR011021
ARS2 Arsenite-resistance protein 2 PF04959 IPR007042
ArsA_ATPase Anion-transporting ATPase PF02374
ArsB Arsenical pump membrane protein PF02040 IPR000802
ArsC ArsC family PF03960 IPR006660
ArsD Arsenical resistance operon trans-acting repressor ArsD PF06953 IPR010712
ArsR ArsR transcriptional regulator PF09824 IPR014517
ART NAD:arginine ADP-ribosyltransferase PF01129 IPR000768
Arteri_env Arterivirus envelope protein PF01606 IPR002556
Arteri_Gl Arterivirus GL envelope glycoprotein PF00951 IPR001332
Arteri_GP4 Arterivirus glycoprotein PF02497 IPR003412
Arteri_nucleo Arterivirus nucleocapsid protein PF01481 IPR002484
Arv1 Arv1-like family PF04161 IPR007290
Arylesterase Arylesterase PF01731 IPR002640
Arylsulfotrans Arylsulfotransferase (ASST) PF05935 IPR010262
ASC Amiloride-sensitive sodium channel PF00858 IPR001873
ASCH ASCH domain PF04266 IPR007374
ASD1 Apx/Shroom domain ASD1 PF08688 IPR014800
ASD2 Apx/Shroom domain ASD2 PF08687 IPR014799
ASF1_hist_chap ASF1 like histone chaperone PF04729 IPR006818
ASFV_360 African swine fever virus multigene family 360 protein PF01671 IPR002595
ASFV_J13L African swine fever virus J13L protein PF05568 IPR008385
ASFV_L11L African swine fever virus (ASFV) L11L protein PF05293 IPR007957
ASFV_p27 IAP-like protein p27 C-terminus PF06556 IPR010549
AsiA Anti-Sigma Factor A PF09010 IPR015100
ASL_C Adenylosuccinate lyase C-terminal PF08328 IPR013539
AsmA AsmA family PF05170 IPR007844
AsnA Aspartate-ammonia ligase PF03590 IPR004618
AsnC_trans_reg AsnC family PF01037 IPR019887
Asn_synthase Asparagine synthase PF00733 IPR001962
Asp Eukaryotic aspartyl protease PF00026 IPR001461
Asp-Al_Ex Predicted Permease Membrane Region PF06826 IPR006512
Asp-B-Hydro_N Aspartyl beta-hydroxylase N-terminal region PF05279 IPR007943
Asparaginase Asparaginase PF00710 IPR006034
Asparaginase_2 Asparaginase PF01112 IPR000246
Asparaginase_II L-asparaginase II PF06089 IPR010349
Asp_Arg_Hydrox Aspartyl/Asparaginyl beta-hydroxylase PF05118 IPR007803
Asp_decarbox Aspartate decarboxylase PF02261 IPR003190
Asp_Glu_race Asp/Glu/Hydantoin racemase PF01177 IPR015942
Asp_protease Aspartyl protease PF09668 IPR019103
Asr Acid shock protein repeat PF06392 IPR009435
AstA Arginine N-succinyltransferase beta subunit PF04958 IPR007041
Astacin Astacin (Peptidase family M12A) PF01400 IPR001506
AstB Succinylarginine dihydrolase PF04996 IPR007079
AstE_AspA Succinylglutamate desuccinylase / Aspartoacylase family PF04952 IPR007036
Astro_capsid Astrovirus capsid protein precursor PF03115 IPR004337
ATE_C Arginine-tRNA-protein transferase, C terminus PF04377 IPR007472
ATE_N Arginine-tRNA-protein transferase, N terminus PF04376 IPR007471
ATG11 Autophagy-related protein 11 PF10377 IPR019460
ATG13 Autophagy-related protein 13 PF10033 IPR018731
ATG16 Autophagy protein 16 (ATG16) PF08614 IPR013923
ATG27 Autophagy-related protein 27 PF09451 IPR018939
Atg31 Autophagy-related protein 31 PF09795 IPR018621
ATG_C ATG C terminal domain PF09333 IPR015412
ATHILA ATHILA ORF-1 family PF03078 IPR004312
ATLF Anthrax toxin lethal factor, N- and C-terminal domain PF07737 IPR014781
ATP-cone ATP cone domain PF03477 IPR005144
ATP-grasp ATP-grasp domain PF02222 IPR003135
ATP-grasp_2 ATP-grasp domain PF08442 IPR013650
ATP-grasp_3 ATP-grasp domain PF02655 IPR003806
ATP-gua_Ptrans ATP:guanido phosphotransferase, C-terminal catalytic domain PF00217 IPR022414
ATP-gua_PtransN ATP:guanido phosphotransferase, N-terminal domain PF02807 IPR022413
ATP-sulfurylase ATP-sulfurylase PF01747 IPR002650
ATP-synt ATP synthase PF00231 IPR000131
ATP-synt_10 ATP10 protein PF05176 IPR007849
ATP-synt_8 ATP synthase protein 8 PF00895 IPR001421
ATP-synt_A ATP synthase A chain PF00119 IPR000568
ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain PF00006 IPR000194
ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain PF00306 IPR000793
ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain PF02874 IPR004100
ATP-synt_B ATP synthase B/B' CF(0) PF00430 IPR002146
ATP-synt_C ATP synthase subunit C PF00137 IPR002379
ATP-synt_D ATP synthase subunit D PF01813 IPR002699
ATP-synt_DE ATP synthase, Delta/Epsilon chain, long alpha-helix domain PF00401 IPR020547
ATP-synt_DE_N ATP synthase, Delta/Epsilon chain, beta-sandwich domain PF02823 IPR020546
ATP-synt_E ATP synthase E chain PF05680 IPR008386
ATP-synt_Eps Mitochondrial ATP synthase epsilon chain PF04627 IPR006721
ATP-synt_E_2 ATP synthase epsilon subunit PF08112 IPR012508
ATP-synt_F ATP synthase (F/14-kDa) subunit PF01990 IPR008218
ATP-synt_F6 Mitochondrial ATP synthase coupling factor 6 PF05511 IPR008387
ATP-synt_G Mitochondrial ATP synthase g subunit PF04718 IPR006808
ATP-synt_J ATP synthase j chain PF04911 IPR006995
ATP-synt_S1 Vacuolar ATP synthase subunit S1 (ATP6S1) PF05827
ATP11 ATP11 protein PF06644 IPR010591
ATP12 ATP12 chaperone protein PF07542 IPR011419
ATP1G1_PLM_MAT8 ATP1G1/PLM/MAT8 family PF02038 IPR000272
ATPase_gene1 Putative F0F1-ATPase subunit (ATPase_gene1) PF09527
ATP_bind_1 Conserved hypothetical ATP binding protein PF03029 IPR004130
ATP_bind_2 P-loop ATPase protein family PF03668 IPR005337
ATP_bind_3 PP-loop family PF01171 IPR011063
ATP_bind_4 ATP-binding region PF01902 IPR002761
ATP_sub_h ATP synthase complex subunit h PF10775 IPR019711
ATP_synt_H ATP synthase subunit H PF05493 IPR008389
ATP_synt_I ATP synthase I chain PF03899 IPR005598
ATP_transf ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) PF09830 IPR019200
Atracotoxin Delta Atracotoxin PF05353 IPR008017
Atrophin-1 Atrophin-1 family PF03154 IPR002951
ATS3 Embryo-specific protein 3, (ATS3) PF06232 IPR010417
Attacin_C Attacin, C-terminal region PF03769 IPR005521
Attacin_N Attacin, N-terminal region PF03768 IPR005520
Attractin Attractin family PF08037 IPR012529
Atx10homo_assoc Spinocerebellar ataxia type 10 protein domain PF09759 IPR019156
ATX_III Anemonia sulcata toxin III family PF08098 IPR012509
AT_hook AT hook motif PF02178 IPR017956
Aurora-A_bind Aurora-A binding PF09041 IPR015128
Autoind_bind Autoinducer binding domain PF03472 IPR005143
Autoind_synth Autoinducer synthetase PF00765 IPR001690
Autophagy_act_C Autophagocytosis associated protein, active-site domain PF03987 IPR007135
Autophagy_Cterm Autophagocytosis associated protein, very C-terminal domain PF10381 IPR019461
Autophagy_N Autophagocytosis associated protein (Atg3), N-terminal domain PF03986 IPR007134
Autotransporter Autotransporter beta-domain PF03797 IPR005546
Auto_anti-p27 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PF06677 IPR009563
Auxin_BP Auxin binding protein PF02041 IPR000526
Auxin_inducible Auxin responsive protein PF02519 IPR003676
Auxin_repressed Dormancy/auxin associated protein PF05564 IPR008406
Auxin_resp Auxin response factor PF06507 IPR010525
AUX_IAA AUX/IAA family PF02309 IPR003311
Avian_gp85 Avian retrovirus envelope protein, gp85 PF03708 IPR005166
Avidin Avidin family PF01382 IPR005468
Avirulence Xanthomonas avirulence protein, Avr/PthA PF03377 IPR005042
Avl9 Transport protein Avl9 PF09794 IPR018307
AvrB_AvrC Avirulence protein PF05394 IPR008798
AvrD Pseudomonas avirulence D protein (AvrD) PF05655 IPR008799
AvrPphF-ORF-2 AvrPphF-ORF-2 PF09143 IPR015226
AvrPtoB-E3_ubiq AvrPtoB E3 ubiquitin ligase PF09046 IPR015133
Av_adeno_fibre Avian adenovirus fibre PF06536 IPR010537
AWPM-19 AWPM-19-like family PF05512 IPR008390
AXE1 Acetyl xylan esterase (AXE1) PF05448 IPR008391
AXH Ataxin-1 and HBP1 module (AXH) PF08517 IPR013723
Axin_b-cat_bind Axin beta-catenin binding domain PF08833 IPR014936
Ax_dynein_light Axonemal dynein light chain PF10211 IPR019347
AzlC AzlC protein PF03591 IPR011606
AzlD Branched-chain amino acid transport protein (AzlD) PF05437 IPR008407
A_amylase_inhib Alpha amylase inhibitor PF01356 IPR000833
A_deamin Adenosine-deaminase (editase) domain PF02137 IPR002466
A_deaminase Adenosine/AMP deaminase PF00962 IPR001365
A_deaminase_N Adenosine/AMP deaminase N-terminal PF08451 IPR013659
A_thal_3526 Plant protein 1589 of unknown function (A_thal_3526) PF09713 IPR006476
B B domain PF02216 IPR003132
B-block_TFIIIC B-block binding subunit of TFIIIC PF04182 IPR007309
B1 Protein L b1 domain PF02246 IPR003147
B12-binding B12 binding domain PF02310 IPR006158
B12-binding_2 B12 binding domain PF02607 IPR003759
B12D B12D protein PF06522 IPR010530
B2-adapt-app_C Beta2-adaptin appendage, C-terminal sub-domain PF09066 IPR015151
B3 B3 DNA binding domain PF02362 IPR003340
B3_4 B3/4 domain PF03483 IPR005146
B5 tRNA synthetase B5 domain PF03484 IPR005147
B56 Protein phosphatase 2A regulatory B subunit (B56 family) PF01603 IPR002554
B9 B9 protein PF07162 IPR010796
BA14K BA14K-like protein PF07886 IPR012413
BAALC_N BAALC N-terminus PF06989 IPR009728
BAAT_C BAAT / Acyl-CoA thioester hydrolase C terminal PF08840 IPR014940
BacA Bacitracin resistance protein BacA PF02673 IPR003824
Bacillus_HBL Bacillus haemolytic enterotoxin (HBL) PF05791 IPR008414
Bacillus_PapR Bacillus PapR protein PF05968 IPR009239
BACK BTB And C-terminal Kelch PF07707 IPR011705
bact-PGI_C Bacterial phospho-glucose isomerase C-terminal region PF10432 IPR019490
Bacteriocin_II Class II bacteriocin PF01721 IPR002633
Bacteriocin_IIc Bacteriocin class II with double-glycine leader peptide PF10439 IPR019493
Bacterioc_AS-48 Bacteriocin AS-48 PF09221 IPR009086
Bact_transglu_N Bacterial transglutaminase-like N-terminal region PF08379 IPR013589
Baculo_11_kDa Baculovirus 11 kDa family PF06143 IPR009313
Baculo_19 Baculovirus 19 kDa protein conserved region PF04798 IPR006883
Baculo_44 Baculovirus hypothetical protein PF04631 IPR006725
Baculo_8kDa Baculoviridae 8.2 KDa protein PF06096 IPR009289
Baculo_DNA_bind ssDNA binding protein PF04786 IPR006871
Baculo_E25 Occlusion-derived virus envelope protein E25 PF05274
Baculo_E56 Baculoviral E56 protein, specific to ODV envelope PF04639 IPR006733
Baculo_E66 Baculovirus E66 occlusion-derived virus envelope protein PF04850 IPR006934
Baculo_FP Baculovirus FP protein PF03258 IPR004941
Baculo_gp41 Structural glycoprotein p40/gp41 conserved region PF04700 IPR006790
Baculo_gp64 Baculovirus gp64 envelope glycoprotein family PF03273 IPR004955
Baculo_helicase Baculovirus DNA helicase PF04735 IPR006824
Baculo_IE-1 Baculovirus immediate-early protein (IE-0) PF05290 IPR007954
Baculo_LEF-10 Baculovirus late expression factor 10 (LEF-10) PF07206 IPR009855
Baculo_LEF-11 Baculovirus LEF-11 protein PF06385 IPR009429
Baculo_LEF-2 lef-2 PF03041 IPR004283
Baculo_LEF-3 Nucleopolyhedrovirus late expression factor 3 (LEF-3) PF05847 IPR008415
Baculo_LEF5 Baculoviridae late expression factor 5 PF04838 IPR006923
Baculo_ME53 Baculoviridae ME53 PF06061 IPR010336
Baculo_ODV-E27 Baculovirus occlusion-derived virus envelope protein EC27 PF05314 IPR007978
Baculo_p24 Baculovirus P24 capsid protein PF05073 IPR007765
Baculo_p26 Nucleopolyhedrovirus p26 protein PF04766 IPR006853
Baculo_p33 Baculovirus P33 PF05214 IPR007879
Baculo_p47 Baculovirus P47 protein PF05112 IPR007799
Baculo_p48 Baculovirus P48 protein PF04878 IPR006962
Baculo_p74 Baculoviridae p74 conserved region PF04583 IPR007663
Baculo_p74_N Baculoviridae P74 N-terminal PF08404 IPR013613
Baculo_PEP_C Baculovirus polyhedron envelope protein, PEP, C terminus PF04513 IPR007601
Baculo_PEP_N Baculovirus polyhedron envelope protein, PEP, N terminus PF04512 IPR007600
Baculo_PP31 Baculovirus 33KDa late protein (PP31) PF05311 IPR007975
Baculo_RING Baculovirus U-box/Ring-like domain PF05883 IPR008573
Baculo_VP1054 Baculovirus VP1054 protein PF05789 IPR008416
Baculo_VP39 Baculovirus major capsid protein VP39 PF04501 IPR007589
Baculo_VP91_N Viral capsid protein 91 N-terminal PF08475 IPR013682
Baculo_Y142 Baculovirus Y142 protein PF04913 IPR006997
Bac_ATP_syn_I Bacterial ATP synthase I PF05468
Bac_chlorC Bacteriochlorophyll C binding protein PF02043 IPR001470
Bac_DnaA Bacterial dnaA protein PF00308 IPR013317
Bac_DnaA_C Bacterial dnaA protein helix-turn-helix domain PF08299 IPR013159
Bac_DNA_binding Bacterial DNA-binding protein PF00216 IPR000119
Bac_export_1 Bacterial export proteins, family 1 PF01311 IPR002010
Bac_export_2 FlhB HrpN YscU SpaS Family PF01312 IPR006135
Bac_export_3 Bacterial export proteins, family 3 PF01313 IPR002191
Bac_GDH Bacterial NAD-glutamate dehydrogenase PF05088 IPR007780
Bac_globin Bacterial-like globin PF01152 IPR001486
Bac_luciferase Luciferase-like monooxygenase PF00296 IPR016048
Bac_rhamnosid Bacterial alpha-L-rhamnosidase PF05592 IPR008902
Bac_rhamnosid_N Alpha-L-rhamnosidase N-terminal domain PF08531 IPR013737
Bac_rhodopsin Bacteriorhodopsin PF01036 IPR001425
Bac_small_YrzI Probable sporulation protein (Bac_small_yrzI) PF09501 IPR012655
Bac_surface_Ag Surface antigen PF01103 IPR000184
Bac_thur_toxin Bacillus thuringiensis toxin PF01338 IPR001615
Bac_transf Bacterial sugar transferase PF02397 IPR003362
Bac_Ubq_Cox Bacterial Cytochrome Ubiquinol Oxidase PF01654 IPR002585
BAF Barrier to autointegration factor PF02961 IPR004122
BAF1_ABF1 BAF1 / ABF1 chromatin reorganising factor PF04684 IPR006774
BaffR-Tall_bind BAFF-R, TALL-1 binding PF09256 IPR015336
BAG BAG domain PF02179 IPR003103
BAGE B melanoma antigen family PF08180 IPR012530
BAH BAH domain PF01426 IPR001025
BALF1 BALF1 protein PF06861 IPR010677
BAMBI BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain PF06211 IPR009345
BamHI Restriction endonuclease BamHI PF02923 IPR004194
Band_3_cyto Band 3 cytoplasmic domain PF07565 IPR013769
Band_7 SPFH domain / Band 7 family PF01145 IPR001107
BAP Basal layer antifungal peptide (BAP) PF06639 IPR009540
Bap31 B-cell receptor-associated protein 31-like PF05529 IPR008417
BAR BAR domain PF03114 IPR004148
Barren Barren protein PF05786
Barstar Barstar (barnase inhibitor) PF01337 IPR000468
Barwin Barwin family PF00967 IPR001153
BAR_2 Bin/amphiphysin/Rvs domain for vesicular trafficking PF10455 IPR018859
BAR_3_WASP_bdg WASP-binding domain of Sorting nexin protein PF10456 IPR019497
Baseplate_J Baseplate J-like protein PF04865 IPR006949
Basic Myogenic Basic domain PF01586 IPR002546
BASP1 Brain acid soluble protein 1 (BASP1 protein) PF05466 IPR008408
BAT2_N BAT2 N-terminus PF07001 IPR009738
BATS Biotin and Thiamin Synthesis associated domain PF06968 IPR010722
BB1 BB1 family PF08185 IPR012531
BBE Berberine and berberine like PF08031 IPR012951
BC10 Bladder cancer-related protein BC10 PF06726 IPR018015
BCAS2 Breast carcinoma amplified sequence 2 (BCAS2) PF05700 IPR008409
BCCT BCCT family transporter PF02028 IPR000060
BCDHK_Adom3 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase PF10436 IPR018955
BCHF 2-vinyl bacteriochlorophyllide hydratase (BCHF) PF07284 IPR009905
BChl_A Bacteriochlorophyll A protein PF02327 IPR003426
Bcl-2 Apoptosis regulator proteins, Bcl-2 family PF00452 IPR000712
Bcl-2_BAD Pro-apoptotic Bcl-2 protein, BAD PF10514 IPR018868
Bclx_interact Bcl-x interacting PF08945 IPR015040
BCL_N BCL7, N-terminal conserver region PF04714 IPR006804
BCMA-Tall_bind BCMA, TALL-1 binding PF09257 IPR015337
BCNT Bucentaur or craniofacial development PF07572 IPR011421
Bcr-Abl_Oligo Bcr-Abl oncoprotein oligomerisation domain PF09036 IPR015123
BcrAD_BadFG BadF/BadG/BcrA/BcrD ATPase family PF01869 IPR002731
BCS1_N BCS1 N terminal PF08740 IPR014851
BcsB Bacterial cellulose synthase subunit PF03170 IPR018513
BCSC_C Cellulose synthase operon protein C C-terminus (BCSC_C) PF05420 IPR008410
BDHCT BDHCT (NUC031) domain PF08072 IPR012532
BDM Putative biofilm-dependent modulation protein PF10684 IPR019625
BDS_I_II Antihypertensive protein BDS-I/II PF07936 IPR012414
BDV_G Borna disease virus G protein PF06208 IPR009344
BDV_P10 Borna disease virus P10 protein PF06515 IPR009485
BDV_P24 Borna disease virus P24 protein PF06595 IPR009517
BDV_P40 Borna disease virus P40 protein PF06407 IPR009441
Beach Beige/BEACH domain PF02138 IPR000409
BEN BEN domain PF10523 IPR018379
BenE Benzoate membrane transport protein PF03594 IPR004711
Benyvirus_14KDa Benyvirus 14KDa protein PF07255 IPR009884
Benyvirus_P25 Benyvirus P25 protein PF05744 IPR008419
Beny_P26 Furovirus P26 PF03019
BESS BESS motif PF02944 IPR004210
Bestrophin Bestrophin PF01062 IPR021134
Beta-APP Beta-amyloid peptide (beta-APP) PF03494 IPR013803
Beta-lactamase Beta-lactamase PF00144 IPR001466
Beta-trefoil Beta-trefoil PF09270 IPR015350
BetaGal_dom2 Beta-galactosidase, domain 2 PF10435 IPR018954
Beta_elim_lyase Beta-eliminating lyase PF01212 IPR001597
Beta_propel Beta propeller domain PF09826 IPR019198
BetR BetR domain PF08667 IPR013975
Bet_v_I Pathogenesis-related protein Bet v I family PF00407 IPR000916
BEX Brain expressed X-linked like family PF04538 IPR021156
Bgal_small_N Beta galactosidase small chain PF02929 IPR004199
BH4 Bcl-2 homology region 4 PF02180 IPR003093
BHD_1 Rad4 beta-hairpin domain 1 PF10403 IPR018326
BHD_2 Rad4 beta-hairpin domain 2 PF10404 IPR018327
BHD_3 Rad4 beta-hairpin domain 3 PF10405 IPR018328
BicD Microtubule-associated protein Bicaudal-D PF09730 IPR018477
BID BH3 interacting domain (BID) PF06393 IPR010479
BIG1 ER protein BIG1 PF08319
Big_1 Bacterial Ig-like domain (group 1) PF02369 IPR003344
Big_2 Bacterial Ig-like domain (group 2) PF02368 IPR003343
Big_3 Bacterial Ig-like domain (group 3) PF07523 IPR011080
Big_4 Bacterial Ig-like domain (group 4) PF07532 IPR011081
Bile_Hydr_Trans Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase PF04775 IPR006862
Biliv-reduc_cat Biliverdin reductase, catalytic PF09166 IPR015249
Bim_N Bim protein N-terminus PF06773 IPR014771
Bin3 Bicoid-interacting protein 3 (Bin3) PF06859 IPR010675
Binary_toxA Clostridial binary toxin A PF03496 IPR003540
Binary_toxB Clostridial binary toxin B/anthrax toxin PA PF03495 IPR003896
Bindin Bindin PF02084 IPR000775
BING4CT BING4CT (NUC141) domain PF08149 IPR012952
Biopterin_H Biopterin-dependent aromatic amino acid hydroxylase PF00351 IPR019774
Biotin_carb_C Biotin carboxylase C-terminal domain PF02785 IPR005482
Biotin_lipoyl Biotin-requiring enzyme PF00364 IPR000089
BioW 6-carboxyhexanoate--CoA ligase PF03744 IPR005499
BioY BioY family PF02632 IPR003784
BiPBP_C Penicillin-Binding Protein C-terminus Family PF06832 IPR009647
BIR Inhibitor of Apoptosis domain PF00653 IPR001370
Birna_RdRp Birnavirus RNA dependent RNA polymerase (VP1) PF04197 IPR007100
Birna_VP2 Birnavirus VP2 protein PF01766 IPR002662
Birna_VP3 Birnavirus VP3 protein PF01767 IPR002663
Birna_VP4 Birnavirus VP4 protein PF01768 IPR002664
Birna_VP5 Birnavirus VP5 protein PF03042 IPR004284
BIV_Env Bovine immunodeficiency virus surface envelope protein (ENV) PF05858 IPR008411
BK_channel_a Calcium-activated BK potassium channel alpha subunit PF03493 IPR003929
BLIP Beta-lactamase inhibitor (BLIP) PF07467 IPR009099
BLOC1_2 Biogenesis of lysosome-related organelles complex-1 subunit 2 PF10046 IPR019269
BLUF Sensors of blue-light using FAD PF04940 IPR007024
BLVR Bovine leukaemia virus receptor (BLVR) PF06375 IPR010474
BLYB Borrelia hemolysin accessory protein PF05289 IPR007953
BMC BMC domain PF00936 IPR000249
BmKK2_toxic BmKK2 toxic PF09146 IPR015229
BmKX BmKX PF09132
Bmp Basic membrane protein PF02608 IPR003760
BNIP3 BNIP3 PF06553 IPR010548
BNR BNR/Asp-box repeat PF02012 IPR002860
BOF Bacterial OB fold (BOF) protein PF04076 IPR005220
BofA SigmaK-factor processing regulatory protein BofA PF07441 IPR010001
BOFC_N Bypass of Forespore C, N terminal PF08977 IPR015071
BolA BolA-like protein PF01722 IPR002634
Bombesin Bombesin-like peptide PF02044 IPR000874
Bombinin Bombinin PF05298 IPR007962
Bombolitin Bombolitin family PF08096 IPR012534
BON Putative phospholipid-binding domain PF04972 IPR007055
BOP1NT BOP1NT (NUC169) domain PF08145 IPR012953
Borealin Cell division cycle-associated protein 8 PF10512 IPR018867
Borrelia_lipo_1 Borrelia burgdorferi virulent strain associated lipoprotein PF05714 IPR008421
Borrelia_lipo_2 Borrelia burgdorferi BBR25 lipoprotein PF06238 IPR009358
Borrelia_orfA Borrelia ORF-A PF02414 IPR003459
Borrelia_orfD Borrelia orf-D family PF02999 IPR004248
Borrelia_orfX Orf-X protein PF04160 IPR007289
Borrelia_P13 Borrelia membrane protein P13 PF05628 IPR008420
Borrelia_P83 Borrelia P83/100 protein PF05262 IPR007926
Borrelia_rep Borrelia repeat protein PF03183 IPR004874
Borrelia_REV Borrelia burgdorferi REV protein PF03978 IPR007126
Botulinum_HA-17 Clostridium botulinum HA-17 protein PF05588 IPR008903
Bowman-Birk_leg Bowman-Birk serine protease inhibitor family PF00228 IPR000877
BP28CT BP28CT (NUC211) domain PF08146 IPR012954
BPD_transp_1 Binding-protein-dependent transport system inner membrane component PF00528 IPR000515
BPD_transp_2 Branched-chain amino acid transport system / permease component PF02653 IPR001851
BphX BphX-like PF06139 IPR009310
BPL_C Biotin protein ligase C terminal domain PF02237 IPR003142
BPL_LipA_LipB Biotin/lipoate A/B protein ligase family PF03099 IPR004143
BPL_N Biotin-protein ligase, N terminal PF09825 IPR019197
BPS BPS (Between PH and SH2) PF08947 IPR015042
Bradykinin Bradykinin PF06753 IPR009608
Branch Core-2/I-Branching enzyme PF02485 IPR021141
Branch_AA_trans Branched-chain amino acid transport protein PF05525 IPR004685
BRAP2 BRCA1-associated protein 2 PF07576 IPR011422
BRCA-2_helical BRCA2, helical PF09169 IPR015252
BRCA-2_OB1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 PF09103 IPR015187
BRCA-2_OB3 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 PF09104 IPR015188
BRCA2 BRCA2 repeat PF00634 IPR002093
BRCT BRCA1 C Terminus (BRCT) domain PF00533 IPR001357
BRE Brain and reproductive organ-expressed protein (BRE) PF06113 IPR010358
BRE1 BRE1 E3 ubiquitin ligase PF08647 IPR013956
Brevenin Brevenin/esculentin/gaegurin/rugosin family PF03032 IPR004275
BRF1 Brf1-like TBP-binding domain PF07741 IPR011665
BRICHOS BRICHOS domain PF04089 IPR007084
Brix Brix domain PF04427 IPR007109
BRK BRK domain PF07533 IPR006576
BrkDBD Brinker DNA-binding domain PF09607 IPR018586
Bro-N BRO family, N-terminal domain PF02498 IPR003497
BRO1 BRO1-like domain PF03097 IPR004328
Bromodomain Bromodomain PF00439 IPR001487
Bromo_coat Bromovirus coat protein PF01318 IPR002009
Bromo_MP Bromovirus movement protein PF01573 IPR002538
Bromo_TP Bromodomain associated PF07524 IPR006565
Brr6_like_C_C Di-sulfide bridge nucleocytoplasmic transport domain PF10104 IPR018767
Brucella_OMP2 Brucella outer membrane protein 2 PF05244 IPR007908
BSD BSD domain PF03909 IPR005607
Bse634I Cfr10I/Bse634I restriction endonuclease PF07832 IPR012415
BSP Plant Basic Secretory Protein PF04450 IPR007541
BSP_II Bone sialoprotein II (BSP-II) PF05432 IPR008412
BSRF1 BSRF1-like protein PF04743
BssC_TutF BssC/TutF protein PF08201 IPR013161
BssS Biofilm regulator BssS PF10774 IPR019710
BsuBI_PstI_RE BsuBI/PstI restriction endonuclease C-terminus PF06616 IPR009528
BT1 BT1 family PF03092 IPR004324
BTAD Bacterial transcriptional activator domain PF03704 IPR005158
BTB BTB/POZ domain PF00651 IPR013069
BTG BTG family PF07742 IPR002087
BTK BTK motif PF00779 IPR001562
BTP Bacterial Transmembrane Pair family PF05232 IPR007896
BtpA BtpA family PF03437 IPR005137
BTV_NS2 Bluetongue virus non-structural protein NS2 PF04514 IPR007602
Btz CASC3/Barentsz eIF4AIII binding PF09405 IPR018545
Bt_P21 Bacillus thuringiensis P21 molecular chaperone protein PF05560 IPR008423
BUD22 BUD22 PF09073 IPR015158
Bug Bordetella uptake gene (bug) product PF03401 IPR005064
Bul1_C Bul1 C terminus PF04426
Bul1_N Bul1 N terminus PF04425 IPR007519
Bundlin Bundlin PF05307 IPR007971
Bunya_G1 Bunyavirus glycoprotein G1 PF03557 IPR005167
Bunya_G2 Bunyavirus glycoprotein G2 PF03563 IPR005168
Bunya_NS-S Bunyavirus non-structural protein NS-s PF01104 IPR000797
Bunya_NS-S_2 Bunyavirus non-structural protein NS-S PF03231 IPR004915
Bunya_NSM Non-structural protein NSM PF04804
Bunya_nucleocap Bunyavirus nucleocapsid (N) protein PF00952 IPR001784
Bunya_RdRp Bunyavirus RNA dependent RNA polymerase PF04196 IPR007322
BURP BURP domain PF03181 IPR004873
But2 Ubiquitin 3 binding protein But2 PF09792
Bvg_acc_factor Bordetella pertussis Bvg accessory factor family PF03309 IPR004619
Bys1 Blastomyces yeast-phase-specific protein PF04681 IPR006771
Bystin Bystin PF05291 IPR007955
bZIP_1 bZIP transcription factor PF00170 IPR011616
bZIP_2 Basic region leucine zipper PF07716 IPR011700
bZIP_Maf bZIP Maf transcription factor PF03131 IPR004826
B_lectin D-mannose binding lectin PF01453 IPR001480
c-SKI_SMAD_bind c-SKI Smad4 binding domain PF08782 IPR014890
C1-set Immunoglobulin C1-set domain PF07654 IPR003597
C1q C1q domain PF00386 IPR001073
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) PF00130 IPR002219
C1_2 C1 domain PF03107 IPR004146
C1_3 C1-like domain PF07649 IPR011424
C1_4 TFIIH C1-like domain PF07975 IPR004595
C2 C2 domain PF00168 IPR000008
C2-set Immunoglobulin C2-set domain PF05790 IPR008424
C2-set_2 CD80-like C2-set immunoglobulin domain PF08205 IPR013162
C4 C-terminal tandem repeated domain in type 4 procollagen PF01413 IPR001442
C4dic_mal_tran C4-dicarboxylate transporter/malic acid transport protein PF03595 IPR004695
C5-epim_C D-glucuronyl C5-epimerase C-terminus PF06662 IPR010598
C6 C6 domain PF01681 IPR002601
C6_DPF Cysteine-rich domain PF10170 IPR018785
C8 C8 domain PF08742 IPR014853
Caa3_CtaG Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PF09678 IPR019108
Cache_1 Cache domain PF02743 IPR004010
Cache_2 Cache domain PF08269 IPR013163
CactinC_cactus Cactus-binding C-terminus of cactin protein PF09732 IPR019134
Cactin_mid Conserved mid region of cactin PF10312 IPR018816
Cad Cadmium resistance transporter PF03596 IPR004676
Cadherin Cadherin domain PF00028 IPR002126
Cadherin_2 Cadherin-like PF08266 IPR013164
Cadherin_C Cadherin cytoplasmic region PF01049 IPR000233
Cadherin_pro Cadherin prodomain like PF08758 IPR014868
Caenor_Her-1 Caenorhabditis elegans Her-1 PF09232 IPR015313
Caerin_1 Caerin 1 protein PF07440 IPR010000
CAF1 CAF1 family ribonuclease PF04857 IPR006941
CagA CagA exotoxin PF03507 IPR005169
CagE_TrbE_VirB CagE, TrbE, VirB family, component of type IV transporter system PF03135 IPR018145
CagX Conjugal transfer protein PF03524 IPR010258
CagY_M DC-EC Repeat PF07337 IPR010853
CagZ CagZ PF09053 IPR015139
CaKB Calcium-activated potassium channel, beta subunit PF03185 IPR003930
Calcipressin Calcipressin PF04847 IPR006931
CALCOCO1 Calcium binding and coiled-coil domain (CALCOCO1) like PF07888 IPR012852
Calcyon D1 dopamine receptor-interacting protein (calcyon) PF06387 IPR009431
Calc_CGRP_IAPP Calcitonin / CGRP / IAPP family PF00214 IPR021116
Caldesmon Caldesmon PF02029 IPR006018
Caleosin Caleosin related protein PF05042 IPR007736
Calici_coat Calicivirus coat protein PF00915 IPR004005
Calici_coat_C Calicivirus coat protein C-terminal PF08435 IPR013643
Calici_MSP Calicivirus minor structural protein PF05752 IPR008437
Calici_PP_N Viral polyprotein N-terminal PF08405 IPR013614
Calmodulin_bind Calmodulin binding protein-like PF07887 IPR012416
Calpain_III Calpain large subunit, domain III PF01067 IPR022682
Calpain_inhib Calpain inhibitor PF00748 IPR001259
Calponin Calponin family repeat PF00402 IPR000557
Calreticulin Calreticulin family PF00262 IPR001580
Calsarcin Calcineurin-binding protein (Calsarcin) PF05556 IPR008438
Calsequestrin Calsequestrin PF01216 IPR001393
Calx-beta Calx-beta domain PF03160 IPR003644
CaMBD Calmodulin binding domain PF02888 IPR004178
CaMKII_AD Calcium/calmodulin dependent protein kinase II Association PF08332 IPR013543
Campylo_MOMP Campylobacter major outer membrane protein PF05538 IPR008439
CAMP_factor CAMP factor (Cfa) PF07373 IPR010860
CamS CamS sex pheromone cAM373 precursor PF07537 IPR011426
CaM_bdg_C0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit PF10562 IPR018882
CaM_binding Plant calmodulin-binding domain PF07839 IPR012417
Candida_ALS Candida agglutinin-like protein (ALS) PF05792 IPR008440
CAP160 CAP160 repeat PF07918 IPR012418
Capsid_NCLDV Large eukaryotic DNA virus major capsid protein PF04451 IPR007542
Capsule_synth Capsule polysaccharide biosynthesis protein PF05159 IPR007833
Caps_synth Capsular polysaccharide synthesis protein PF05704 IPR008441
CAP_C DE Adenylate cyclase associated (CAP) C terminal PF08603 IPR013912
CAP_GLY CAP-Gly domain PF01302 IPR000938
CAP_N Adenylate cyclase associated (CAP) N terminal PF01213 IPR013992
Carboxyl_trans Carboxyl transferase domain PF01039 IPR000022
CarbpepA_inh Carboxypeptidase A inhibitor PF02977 IPR004231
Carbpep_Y_N Carboxypeptidase Y pro-peptide PF05388 IPR008442
Carb_anhydrase Eukaryotic-type carbonic anhydrase PF00194 IPR001148
Carb_bind Carbohydrate binding PF10645 IPR018909
Carb_kinase Carbohydrate kinase PF01256 IPR000631
Carcinustatin Carcinustatin peptide PF08261 IPR013165
CARD Caspase recruitment domain PF00619 IPR001315
CARDB CARDB PF07705 IPR011635
CarD_TRCF CarD-like/TRCF domain PF02559 IPR003711
Carla_C4 Carlavirus putative nucleic acid binding protein PF01623 IPR002568
Carmo_coat_C Carmovirus coat protein PF08462 IPR013669
Carn_acyltransf Choline/Carnitine o-acyltransferase PF00755 IPR000542
Carot_N Orange carotenoid protein, N-terminal PF09150 IPR015233
CART Cocaine and amphetamine regulated transcript protein (CART) PF06373 IPR009106
Cas1p Cas1p-like protein PF07779 IPR012419
Cas6 Cas6 Crispr PF09559 IPR014174
Casein Casein PF00363 IPR001588
Casein_kappa Kappa casein PF00997 IPR000117
CASP_C CASP C terminal PF08172 IPR012955
Cast RIM-binding protein of the cytomatrix active zone PF10174 IPR019323
Cas_APE2256 CRISPR-associated protein (Cas_APE2256) PF09651 IPR013442
Cas_Cas02710 CRISPR-associated protein (Cas_Cas02710) PF09670
Cas_Cas2CT1978 CRISPR-associated protein (Cas_Cas2CT1978) PF09707 IPR010152
Cas_Cas5a CRISPR-associated protein (Cas_Cas5a) PF09705
Cas_Cas5d CRISPR-associated protein (Cas_Cas5d) PF09704 IPR021124
Cas_Cas5e CRISPR-associated protein (Cas_Cas5e) PF09708
Cas_Cmr3 CRISPR-associated protein (Cas_Cmr3) PF09700 IPR019117
Cas_Cmr5 CRISPR-associated protein (Cas_Cmr5) PF09701 IPR010160
Cas_Csa4 CRISPR-associated protein (Cas_Csa4) PF09703 IPR010184
Cas_Csa5 CRISPR-associated protein (Cas_Csa5) PF09702 IPR010157
Cas_Csd1 CRISPR-associated protein (Cas_Csd1) PF09709 IPR010144
CAS_CSE1 CAS/CSE protein, C-terminus PF03378 IPR005043
Cas_Csm6 CRISPR-associated protein (Cas_Csm6) PF09659
Cas_Csn2 CRISPR-associated protein (Cas_Csn2) PF09711 IPR010146
Cas_csx3 CRISPR-associated protein (Cas_csx3) PF09620 IPR013409
Cas_Csx8 CRISPR-associated protein Csx8 (Cas_Csx8) PF09657 IPR013487
Cas_Csx9 CRISPR-associated protein (Cas_Csx9) PF09658 IPR013488
Cas_Csy1 CRISPR-associated protein (Cas_Csy1) PF09611 IPR013397
Cas_Csy2 CRISPR-associated protein (Cas_Csy2) PF09614 IPR013398
Cas_Csy3 CRISPR-associated protein (Cas_Csy3) PF09615 IPR013399
Cas_Csy4 CRISPR-associated protein (Cas_Csy4) PF09618 IPR013396
Cas_CT1975 CT1975-like protein PF09344 IPR010148
Cas_CXXC_CXXC CRISPR-associated protein (Cas_CXXC_CXXC) PF09706 IPR019121
Cas_DxTHG CRISPR-associated (Cas) DxTHG family PF09455 IPR019016
Cas_GSU0053 CRISPR-associated protein GSU0053 (Cas_GSU0053) PF09617 IPR013403
Cas_GSU0054 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) PF09609 IPR019089
Cas_NE0113 CRISPR-associated protein NE0113 (Cas_NE0113) PF09623 IPR019092
Cas_TM1802 CRISPR-associated protein TM1802 (cas_TM1802) PF09484 IPR013389
Cas_TM1812 CRISPR-associated protein (cas_TM1812) PF09530 IPR011742
Cas_VVA1548 Putative CRISPR-associated protein (Cas_VVA1548) PF09652 IPR013443
CAT Chloramphenicol acetyltransferase PF00302 IPR001707
Catalase Catalase PF00199 IPR018028
Catalase-rel Catalase-related immune-responsive PF06628 IPR010582
Cathelicidins Cathelicidin PF00666 IPR001894
CathepsinC_exc Cathepsin C exclusion domain PF08773 IPR014882
Cation_ATPase_C Cation transporting ATPase, C-terminus PF00689 IPR006068
Cation_ATPase_N Cation transporter/ATPase, N-terminus PF00690 IPR004014
Cation_efflux Cation efflux family PF01545 IPR002524
CAT_RBD CAT RNA binding domain PF03123 IPR004341
Caudal_act Caudal like protein activation region PF04731 IPR006820
Caudo_TAP Caudovirales tail fibre assembly protein PF02413 IPR003458
Cauli_AT Aphid transmission protein PF03233 IPR004917
Cauli_DNA-bind Caulimovirus DNA-binding protein PF03310 IPR004986
Cauli_VI Caulimovirus viroplasmin PF01693 IPR011320
Caveolin Caveolin PF01146 IPR001612
CAV_VP3 Chicken anaemia virus VP-3 protein PF04771 IPR006858
Ca_channel_B Dihydropyridine sensitive L-type calcium channel (Beta subunit) PF00774
Ca_chan_IQ Voltage gated calcium channel IQ domain PF08763 IPR014873
CBAH Linear amide C-N hydrolases, choloylglycine hydrolase family PF02275 IPR003199
Cbb3_Q_epsi Cytochrome c oxidase cbb3-type (Cbb3_Q_epsi) PF09672
CbbQ_C CbbQ/NirQ/NorQ C-terminal PF08406 IPR013615
CBF CBF/Mak21 family PF03914 IPR005612
CBFB_NFYA CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B PF02045 IPR001289
CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone PF00808 IPR003958
CBFNT CBFNT (NUC161) domain PF08143 IPR012956
CBF_beta Core binding factor beta subunit PF02312 IPR003417
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain PF01656 IPR002586
CbiC Precorrin-8X methylmutase PF02570 IPR003722
CbiD CbiD PF01888 IPR002748
CbiG CbiG PF01890 IPR002750
CbiJ Precorrin-6x reductase CbiJ/CobK PF02571 IPR003723
CbiK Cobalt chelatase (CbiK) PF06180 IPR010388
CbiM Cobalt uptake substrate-specific transmembrane region PF01891 IPR002751
CbiN Cobalt transport protein component CbiN PF02553 IPR003705
CbiQ Cobalt transport protein PF02361 IPR003339
CbiX CbiX PF01903 IPR002762
CbiZ Adenosylcobinamide amidohydrolase PF01955 IPR002808
CblD CblD like pilus biogenesis initiator PF07434 IPR010888
Cbl_N CBL proto-oncogene N-terminal domain 1 PF02262 IPR003153
Cbl_N2 CBL proto-oncogene N-terminus, EF hand-like domain PF02761 IPR014741
Cbl_N3 CBL proto-oncogene N-terminus, SH2-like domain PF02762 IPR014742
CBM27 Carbohydrate binding module 27 PF09212 IPR015295
CBM49 Carbohydrate binding domain CBM49 PF09478 IPR019028
CBM_1 Fungal cellulose binding domain PF00734 IPR000254
CBM_10 Cellulose or protein binding domain PF02013 IPR002883
CBM_11 Carbohydrate binding domain (family 11) PF03425 IPR005087
CBM_14 Chitin binding Peritrophin-A domain PF01607 IPR002557
CBM_15 Carbohydrate binding domain (family 15) PF03426 IPR005088
CBM_17_28 Carbohydrate binding domain (family 17/28) PF03424 IPR005086
CBM_19 Carbohydrate binding domain (family 19) PF03427 IPR005089
CBM_2 Cellulose binding domain PF00553 IPR001919
CBM_20 Starch binding domain PF00686 IPR002044
CBM_21 Putative phosphatase regulatory subunit PF03370 IPR005036
CBM_25 Carbohydrate binding domain (family 25) PF03423 IPR005085
CBM_3 Cellulose binding domain PF00942 IPR001956
CBM_48 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PF02922 IPR004193
CBM_4_9 Carbohydrate binding domain PF02018 IPR003305
CBM_5_12 Carbohydrate binding domain PF02839 IPR003610
CBM_6 Carbohydrate binding module (family 6) PF03422 IPR005084
CBM_X Putative carbohydrate binding domain PF06204 IPR009342
CBP4 CBP4 PF07960 IPR012420
CBS CBS domain pair PF00571 IPR000644
CbtA Probable cobalt transporter subunit (CbtA) PF09490
CbtB Probable cobalt transporter subunit (CbtB) PF09489 IPR012667
CC CC domain PF04942 IPR007026
CCD WisP family C-Terminal Region PF07860 IPR012421
CcdA Post-segregation antitoxin CcdA PF07362 IPR009956
CcdB CcdB protein PF01845 IPR002712
CCG Cysteine-rich domain PF02754 IPR004017
CcmB CcmB protein PF03379 IPR003544
CcmD Heme exporter protein D (CcmD) PF04995 IPR007078
CcmE CcmE PF03100 IPR004329
CcmH Cytochrome C biogenesis protein PF03918 IPR005616
CcoS Cytochrome oxidase maturation protein cbb3-type PF03597 IPR004714
CCP_MauG Di-haem cytochrome c peroxidase PF03150 IPR004852
CCT CCT motif PF06203 IPR010402
CCT_2 Divergent CCT motif PF09425 IPR018467
CD20 CD20/IgE Fc receptor beta subunit family PF04103 IPR007237
CD225 Interferon-induced transmembrane protein PF04505 IPR007593
CD34_antigen CD34/Podocalyxin family PF06365 IPR013836
CD36 CD36 family PF01130 IPR002159
CD4-extracel CD4, extracellular PF09191 IPR015274
CD47 CD47 transmembrane region PF04549 IPR013147
CDC13-DNA-bind CDC13, ssDNA binding PF09283
CDC14 Cell division control protein 14, SIN component PF08045 IPR012535
CDC24 CDC24 Calponin PF06395 IPR010481
CDC27 DNA polymerase subunit Cdc27 PF09507 IPR019038
CDC37_C Cdc37 C terminal domain PF08564 IPR013873
CDC37_M Cdc37 Hsp90 binding domain PF08565 IPR013874
CDC37_N Cdc37 N terminal kinase binding PF03234 IPR013855
CDC45 CDC45-like protein PF02724 IPR003874
CDC48_2 Cell division protein 48 (CDC48), domain 2 PF02933 IPR004201
CDC48_N Cell division protein 48 (CDC48), N-terminal domain PF02359 IPR003338
CDC50 LEM3 (ligand-effect modulator 3) family / CDC50 family PF03381 IPR005045
Cdc6_C CDC6, C terminal PF09079 IPR015163
CDC73 RNA pol II accessory factor, Cdc73 family PF05179 IPR007852
CdCA1 Cadmium carbonic anhydrase repeat PF10563 IPR018883
CDH CDP-diacylglycerol pyrophosphatase PF02611 IPR003763
CdhC CO dehydrogenase/acetyl-CoA synthase complex beta subunit PF03598 IPR004461
CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit PF03599 IPR016041
CDI Cyclin-dependent kinase inhibitor PF02234 IPR003175
CDK2AP Cyclin-dependent kinase 2-associated protein PF09806 IPR019187
CDK5_activator Cyclin-dependent kinase 5 activator protein PF03261 IPR004944
CDKN3 Cyclin-dependent kinase inhibitor 3 (CDKN3) PF05706
CDO_I Cysteine dioxygenase type I PF05995 IPR010300
CDP-OH_P_transf CDP-alcohol phosphatidyltransferase PF01066 IPR000462
CDP-OH_P_tran_2 CDP-alcohol phosphatidyltransferase 2 PF08009 IPR012616
CDRN Cysteine-rich D. radiodurans N terminus PF05174 IPR007847
CDT1 DNA replication factor CDT1 like PF08839 IPR014939
CDtoxinA Cytolethal distending toxin A/C family PF03498 IPR003558
Cecropin Cecropin family PF00272 IPR000875
CedA Cell division activator CedA PF10729 IPR019666
CelD_N N-terminal ig-like domain of cellulase PF02927 IPR004197
Cellsynth_D Cellulose synthase subunit D PF03500
Cellulase Cellulase (glycosyl hydrolase family 5) PF00150 IPR001547
Cellulose_synt Cellulose synthase PF03552 IPR005150
CemA CemA family PF03040 IPR004282
Cementoin Trappin protein transglutaminase binding domain PF10511 IPR019541
Cenp-B_dimeris Centromere protein B dimerisation domain PF09026 IPR015115
CENP-B_N CENP-B N-terminal DNA-binding domain PF04218 IPR006695
Cenp-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PF10473 IPR019513
Cenp-F_N Cenp-F N-terminal domain PF10481 IPR018463
CENP-H Centromere protein H (CENP-H) PF05837 IPR008426
Cenp-O Cenp-O kinetochore centromere component PF09496 IPR018464
CenpB-DNA-bind Centromere binding protein B, DNA binding PF09091
CEP1-DNA_bind CEP-1, DNA binding PF09287 IPR015367
Ceramidase_alk Neutral/alkaline non-lysosomal ceramidase PF04734
Cerato-platanin Cerato-platanin PF07249 IPR010829
CesT Tir chaperone protein (CesT) PF05932 IPR010261
CfAFP Choristoneura fumiferana antifreeze protein (CfAFP) PF05264 IPR007928
CFC Cripto_Frl-1_Cryptic (CFC) PF09443 IPR019011
CFEM CFEM domain PF05730 IPR008427
CG-1 CG-1 domain PF03859 IPR005559
Cg6151-P Uncharacterized conserved protein CG6151-P PF10233 IPR019365
CGGC CGGC domain PF08821 IPR014925
CGI-121 Kinase binding protein CGI-121 PF08617 IPR013926
Cgr1 Cgr1 family PF03879 IPR005579
CgtA Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) PF06306 IPR010446
CH Calponin homology (CH) domain PF00307 IPR001715
ChaB ChaB PF06150 IPR009317
ChaC ChaC-like protein PF04752 IPR006840
CHAD CHAD domain PF05235 IPR007899
Chagasin_I42 Chagasin peptidase inhibitor I42 PF09394 IPR018990
Chalcone Chalcone-flavanone isomerase PF02431 IPR003466
Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain PF02797 IPR012328
Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain PF00195 IPR001099
Channel_Tsx Nucleoside-specific channel-forming protein, Tsx PF03502 IPR018013
CHAP CHAP domain PF05257 IPR007921
chaperone_DMP 20S proteasome chaperone PF10448 IPR018854
Chaperone_III Type III secretion chaperone domain PF07824 IPR013095
ChAPs ChAPs (Chs5p-Arf1p-binding proteins) PF09295 IPR015374
CHASE CHASE domain PF03924 IPR006189
CHASE2 CHASE2 domain PF05226 IPR007890
CHASE3 CHASE3 domain PF05227 IPR007891
CHASE4 CHASE4 domain PF05228 IPR007892
CHB_HEX Putative carbohydrate binding domain PF03173 IPR004866
CHB_HEX_C Chitobiase/beta-hexosaminidase C-terminal domain PF03174 IPR004867
CHCH CHCH domain PF06747 IPR010625
CHD5 CHD5-like protein PF04420 IPR007514
CHDCT2 CHDCT2 (NUC038) domain PF08074 IPR012957
CHDNT CHDNT (NUC034) domain PF08073 IPR012958
CheB_methylest CheB methylesterase PF01339 IPR000673
CheC CheC-like family PF04509 IPR007597
CheD CheD PF03975 IPR005659
CheR CheR methyltransferase, SAM binding domain PF01739 IPR022642
CheR_N CheR methyltransferase, all-alpha domain PF03705 IPR022641
CheW CheW-like domain PF01584 IPR002545
CheY-binding CheY binding PF09078 IPR015162
CheZ Chemotaxis phosphatase, CheZ PF04344 IPR007439
CHGN Chondroitin N-acetylgalactosaminyltransferase PF05679 IPR008428
ChiC Chitinase C PF06483 IPR009470
ChitinaseA_N Chitinase A, N-terminal domain PF08329 IPR013540
Chitin_bind_1 Chitin recognition protein PF00187 IPR001002
Chitin_bind_3 Chitin binding domain PF03067 IPR004302
Chitin_bind_4 Insect cuticle protein PF00379 IPR000618
Chitin_synth_1 Chitin synthase PF01644 IPR004834
Chitin_synth_1N Chitin synthase N-terminal PF08407 IPR013616
Chitin_synth_2 Chitin synthase PF03142 IPR004835
Chitosanase Fungal chitosanase PF07335 IPR009939
CHL4 Kinetochore protein CHL4 like PF05238 IPR007902
ChlamPMP_M Chlamydia polymorphic membrane protein middle domain PF07548 IPR011427
Chlamy_scaf Chlamydia-phage Chp2 scaffold (Chlamy_scaf) PF09675 IPR014131
Chlam_OMP Chlamydia major outer membrane protein PF01308 IPR000604
Chlam_OMP3 Chlamydia cysteine-rich outer membrane protein 3 PF03503 IPR003517
Chlam_OMP6 Chlamydia cysteine-rich outer membrane protein 6 PF03504 IPR003506
Chlam_PMP Chlamydia polymorphic membrane protein (Chlamydia_PMP) PF02415 IPR003368
Chlam_vir Chlamydia virulence protein PGP3-D PF05475 IPR008444
Chloroa_b-bind Chlorophyll A-B binding protein PF00504
Chlorophyllase Chlorophyllase PF07224 IPR010821
Chlorovi_GP_rpt Chlorovirus glycoprotein repeat PF06598 IPR010568
Chlor_dismutase Chlorite dismutase PF06778 IPR010644
CHMI 5-carboxymethyl-2-hydroxymuconate isomerase PF02962 IPR004220
CholecysA-Rec_N Cholecystokinin A receptor, N-terminal PF09193 IPR015276
Choline_kinase Choline/ethanolamine kinase PF01633 IPR002573
Choline_kin_N Choline kinase N terminus PF04428 IPR007521
Chol_subst-bind Cholesterol oxidase, substrate-binding PF09129 IPR015213
Chon_Sulph_att Chondroitin sulphate attachment domain PF06566 IPR010555
CHORD CHORD PF04968 IPR007051
Chordopox_A13L Chordopoxvirus A13L protein PF05961 IPR009236
Chordopox_A15 Chordopoxvirus A15 protein PF05846 IPR008445
Chordopox_A20R Chordopoxvirus A20R protein PF05941 IPR010267
Chordopox_A30L Chordopoxvirus A30L protein PF06015 IPR009257
Chordopox_A33R Chordopoxvirus A33R protein PF05966 IPR009238
Chordopox_A35R Chordopoxvirus A35R protein PF05989 IPR009247
Chordopox_E11 Chordopoxvirus E11 protein PF06138 IPR009201
Chordopox_G2 Chordopoxvirus protein G2 PF05796 IPR008446
Chordopox_G3 Chordopoxvirus G3 protein PF06129 IPR010367
Chordopox_L2 Chordopoxvirus L2 protein PF05803 IPR008447
Chordopox_RPO7 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) PF05864 IPR008448
Chorion_1 Chorion protein PF01723 IPR002635
Chorion_2 Chorion family 2 PF03964 IPR005649
Chorion_3 Chorion family 3 PF05387
Chorion_S16 Chorion protein S16 PF05836 IPR008450
Chorismate_bind chorismate binding enzyme PF00425 IPR015890
Chorismate_synt Chorismate synthase PF01264 IPR000453
Chor_lyase Chorismate lyase PF04345 IPR007440
ChpXY CO2 hydration protein (ChpXY) PF10216 IPR010220
CHRD CHRD domain PF07452 IPR010895
Chromadorea_ALT Chromadorea ALT protein PF05535 IPR008451
Chromate_transp Chromate transporter PF02417 IPR003370
Chrome_Resist Chromate resistance exported protein PF09828 IPR018634
Chromo 'chromo' (CHRromatin Organisation MOdifier) domain PF00385 IPR000953
Chromo_shadow Chromo shadow domain PF01393 IPR008251
Churchill Churchill protein PF06573 IPR009508
ChW Clostridial hydrophobic W PF07538 IPR006637
CHZ Histone chaperone domain CHZ PF09649 IPR019098
CI-B14_5a NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) PF07347 IPR009947
CIA30 Complex I intermediate-associated protein 30 (CIA30) PF08547 IPR013857
Cid2 Caffeine-induced death protein 2 PF09774 IPR019171
CIDE-N CIDE-N domain PF02017 IPR003508
cIII cIII protein family PF08134 IPR012995
CIMR Cation-independent mannose-6-phosphate receptor repeat PF00878 IPR000479
CinA Competence-damaged protein PF02464 IPR008136
Circo_capsid Circovirus capsid protein PF02443 IPR003383
Cir_Bir_Yir Plasmodium variant antigen protein Cir/Yir/Bir PF06022 IPR006477
Cir_N N-terminal domain of CBF1 interacting co-repressor CIR PF10197 IPR019339
CitD Citrate lyase, gamma subunit PF04953
CITED CITED PF04487 IPR007576
CitF Citrate lyase, alpha subunit (CitF) PF04223 IPR006472
CitG ATP:dephospho-CoA triphosphoribosyl transferase PF01874 IPR002736
CitMHS Citrate transporter PF03600 IPR004680
Citrate_ly_lig Citrate lyase ligase C-terminal domain PF08218 IPR013166
Citrate_synt Citrate synthase PF00285 IPR002020
Citrus_P18 Citrus tristeza virus P18 protein PF05520 IPR008452
CitX Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase PF03802 IPR005551
CKS Cyclin-dependent kinase regulatory subunit PF01111 IPR000789
CK_II_beta Casein kinase II regulatory subunit PF01214 IPR000704
CLAG Cytoadherence-linked asexual protein PF03805 IPR005553
Class_IIIsignal Class III signal peptide PF04021 IPR007166
Clathrin Region in Clathrin and VPS PF00637
Clathrin-link Clathrin, heavy-chain linker PF09268 IPR015348
Clathrin_lg_ch Clathrin light chain PF01086 IPR000996
Clathrin_propel Clathrin propeller repeat PF01394 IPR022365
Clat_adaptor_s Clathrin adaptor complex small chain PF01217
Clavanin Clavanin PF05452 IPR008453
Clc-like Clc-like PF07062 IPR010761
CLCA_N Calcium-activated chloride channel PF08434 IPR013642
Cleaved_Adhesin Cleaved Adhesin Domain PF07675 IPR011628
Clenterotox Clostridium enterotoxin PF03505 IPR003897
CLN3 CLN3 protein PF02487 IPR003492
Cloacin Cloacin PF03515 IPR003058
Cloacin_immun Cloacin immunity protein PF03513 IPR003063
Closter_coat Closterovirus coat protein PF01785 IPR002679
Clostridium_P47 Clostridium P-47 protein PF06597 IPR010567
Clp1 Pre-mRNA cleavage complex II protein Clp1 PF06807 IPR010655
ClpB_D2-small C-terminal, D2-small domain, of ClpB protein PF10431 IPR019489
ClpS ATP-dependent Clp protease adaptor protein ClpS PF02617 IPR003769
CLPTM1 Cleft lip and palate transmembrane protein 1 (CLPTM1) PF05602 IPR008429
Clp_N Clp amino terminal domain PF02861 IPR004176
CLP_protease Clp protease PF00574 IPR001907
Clr2 Transcription-silencing protein Clr2 PF10383 IPR018839
Cluap1 Clusterin-associated protein-1 PF10234 IPR019366
Clusterin Clusterin PF01093 IPR000753
CM1 Influenza C virus M1 protein PF03026 IPR004271
CM2 Influenza C virus M2 protein PF03021 IPR004267
CMAS Cyclopropane-fatty-acyl-phospholipid synthase PF02353 IPR003333
Cmc1 Cytochrome c oxidase biogenesis protein Cmc1 like PF08583 IPR013892
CmcH_NodU Carbamoyltransferase PF02543 IPR003696
CmcI Cephalosporin hydroxylase PF04989 IPR007072
CMD Carboxymuconolactone decarboxylase family PF02627 IPR003779
CMV_US CMV US PF08001 IPR012536
Cmyb_C C-myb, C-terminal PF09316 IPR015395
CM_1 Chorismate mutase type I PF07736 IPR008243
CM_2 Chorismate mutase type II PF01817 IPR020822
Cm_res_leader Chloramphenicol resistance gene leader peptide PF08077 IPR012537
Cna_B Cna protein B-type domain PF05738 IPR008454
CNF1 Rho-activating domain of cytotoxic necrotizing factor PF05785 IPR008430
CNH CNH domain PF00780 IPR001180
Cnl2_NKP2 Cnl2/NKP2 family protein PF09447 IPR018565
cNMP_binding Cyclic nucleotide-binding domain PF00027 IPR000595
CNP1 CNP1-like family PF08750 IPR014861
CNPase 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) PF05881 IPR008431
CNTF Ciliary neurotrophic factor PF01110 IPR000151
CN_hydrolase Carbon-nitrogen hydrolase PF00795 IPR003010
CoaE Dephospho-CoA kinase PF01121 IPR001977
Coagulase Staphylococcus aureus coagulase PF08764 IPR014874
Coagulin Coagulin PF02035 IPR000275
Coatamer_beta_C Coatamer beta C-terminal region PF07718 IPR011710
CoatB Bacteriophage coat protein B PF10389 IPR019463
Coatomer_E Coatomer epsilon subunit PF04733 IPR006822
Coatomer_WDAD Coatomer WD associated region PF04053 IPR006692
Coat_F Coat F domain PF07875 IPR012851
Coat_X Spore Coat Protein X and V domain PF07552 IPR011428
CoA_binding CoA binding domain PF02629 IPR003781
CoA_trans Coenzyme A transferase PF01144 IPR004165
CoA_transf_3 CoA-transferase family III PF02515 IPR003673
Cobalamin_bind Eukaryotic cobalamin-binding protein PF01122 IPR002157
CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PF02572 IPR003724
CobD_Cbib CobD/Cbib protein PF03186 IPR004485
Cobl Cordon-bleu domain PF09469 IPR019025
CobN-Mg_chel CobN/Magnesium Chelatase PF02514 IPR003672
COBRA COBRA-like protein PF04833 IPR006918
COBRA1 Cofactor of BRCA1 (COBRA1) PF06209 IPR010405
CobS Cobalamin-5-phosphate synthase PF02654 IPR003805
CobT Cobalamin biosynthesis protein CobT PF06213 IPR006538
CobU Cobinamide kinase / cobinamide phosphate guanyltransferase PF02283 IPR003203
cobW CobW/HypB/UreG, nucleotide-binding domain PF02492 IPR003495
CobW_C Cobalamin synthesis protein cobW C-terminal domain PF07683 IPR011629
Cob_adeno_trans Cobalamin adenosyltransferase PF01923 IPR002779
CodY CodY GAF-like domain PF06018 IPR010312
COesterase Carboxylesterase PF00135 IPR002018
Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein PF00241 IPR002108
COG2 COG (conserved oligomeric Golgi) complex component, COG2 PF06148 IPR009316
COG4 COG4 transport protein PF08318 IPR013167
COG5 Golgi transport complex subunit 5 PF10392 IPR019465
COG6 Conserved oligomeric complex COG6 PF06419 IPR010490
COG7 Golgi complex component 7 (COG7) PF10191 IPR019335
Cohesin Cohesin domain PF00963 IPR002102
Cohesin_load Cohesin loading factor PF10345 IPR019440
CoiA Competence protein CoiA-like family PF06054 IPR010330
Coiled Coiled coil PF05710 IPR008455
Coiled-coil_56 Coiled-coil domain-containing protein 56 PF09813 IPR018628
Coil_helix Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 PF09800
Coleoptericin Coleoptericin PF06286 IPR009382
COLFI Fibrillar collagen C-terminal domain PF01410 IPR000885
Colicin Colicin pore forming domain PF01024 IPR000293
ColicinD Colicin D PF09204 IPR015287
Colicin_im Colicin immunity protein PF03857 IPR005557
Colicin_Pyocin Colicin immunity protein / pyocin immunity protein PF01320 IPR000290
Colicin_V Colicin V production protein PF02674 IPR003825
Colipase Colipase, N-terminal domain PF01114 IPR017913
Colipase_C Colipase, C-terminal domain PF02740 IPR017914
Collagen Collagen triple helix repeat (20 copies) PF01391 IPR008160
Collagen_bind Collagen binding domain PF05737 IPR008456
Collar Phage Tail Collar Domain PF07484 IPR011083
Col_cuticle_N Nematode cuticle collagen N-terminal domain PF01484 IPR002486
ComA (2R)-phospho-3-sulfolactate synthase (ComA) PF02679 IPR003830
ComC COMC family PF03047 IPR004288
ComFB Late competence development protein ComFB PF10719 IPR019657
ComK ComK protein PF06338 IPR010461
Como_LCP Large coat protein PF02247 IPR003181
Como_SCP Small coat protein PF02248 IPR003182
Competence Competence protein PF03772 IPR004477
Complex1_24kDa Respiratory-chain NADH dehydrogenase 24 Kd subunit PF01257 IPR002023
Complex1_30kDa Respiratory-chain NADH dehydrogenase, 30 Kd subunit PF00329 IPR001268
Complex1_49kDa Respiratory-chain NADH dehydrogenase, 49 Kd subunit PF00346 IPR001135
Complex1_51K Respiratory-chain NADH dehydrogenase 51 Kd subunit PF01512 IPR011538
Complex1_LYR Complex 1 protein (LYR family) PF05347 IPR008011
ComX Bacillus competence pheromone ComX PF05952 IPR009233
Con-6 Conidiation protein 6 PF10346 IPR018824
Condensation Condensation domain PF00668 IPR001242
Connexin Connexin PF00029 IPR013092
Connexin43 Gap junction alpha-1 protein (Cx43) PF03508 IPR013124
Connexin50 Gap junction alpha-8 protein (Cx50) PF03509 IPR002266
Connexin_CCC Gap junction channel protein cysteine-rich domain PF10582 IPR019570
Conotoxin Conotoxin PF02950 IPR004214
Cons_hypoth698 Conserved hypothetical protein 698 PF03601 IPR018383
Cons_hypoth95 Conserved hypothetical protein 95 PF03602 IPR004398
CopB Copper resistance protein B precursor (CopB) PF05275 IPR007939
CopC Copper resistance protein CopC PF04234 IPR007348
CopD Copper resistance protein D PF05425 IPR008457
Copine Copine PF07002 IPR010734
COPI_assoc COPI associated protein PF08507 IPR013714
COPI_C Coatomer (COPI) alpha subunit C-terminus PF06957 IPR010714
Copper-bind Copper binding proteins, plastocyanin/azurin family PF00127 IPR000923
Copper-fist Copper fist DNA binding domain PF00649 IPR001083
Coprinus_mating Coprinus cinereus mating-type protein PF05920 IPR008422
Coprogen_oxidas Coproporphyrinogen III oxidase PF01218 IPR001260
Coq4 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 PF05019 IPR007715
COQ7 Ubiquinone biosynthesis protein COQ7 PF03232 IPR011566
COQ9 COQ9 PF08511 IPR013718
Cor1 Cor1/Xlr/Xmr conserved region PF04803 IPR006888
CorA CorA-like Mg2+ transporter protein PF01544 IPR002523
CorC_HlyC Transporter associated domain PF03471 IPR005170
Cornichon Cornichon protein PF03311 IPR003377
Cornifin Cornifin (SPRR) family PF02389 IPR003302
Coronavirus_5 Coronavirus gene 5 protein PF05528 IPR008458
Coronavirus_NS4 Coronavirus nonstructural protein 4 PF05780
Corona_3 Coronavirus ORF3 protein PF04694 IPR006784
Corona_5a Coronavirus 5a protein PF06336 IPR009404
Corona_6B_7B Coronavirus 6B/7B protein PF03262 IPR004945
Corona_7 Coronavirus protein 7 PF02398 IPR003449
Corona_I Corona nucleocapsid I protein PF03187 IPR004876
Corona_M Coronavirus M matrix/glycoprotein PF01635 IPR002574
Corona_NS1 Coronavirus nonstructural protein NS1 PF06145 IPR009314
Corona_NS2 Coronavirus non-structural protein NS2 PF04753 IPR006841
Corona_NS2A Coronavirus NS2A protein PF05213
Corona_NS3b ORF3b coronavirus protein PF03053 IPR004293
Corona_NS4 Coronavirus non-structural protein NS4 PF03905 IPR005603
Corona_nucleoca Coronavirus nucleocapsid protein PF00937 IPR001218
Corona_RPol_N Coronavirus RPol N-terminus PF06478 IPR009469
Corona_S1 Coronavirus S1 glycoprotein PF01600 IPR002551
Corona_S2 Coronavirus S2 glycoprotein PF01601 IPR002552
CortBP2 Cortactin-binding protein-2 PF09727 IPR019131
Cortex-I_coil Cortexillin I, coiled coil PF09304 IPR015383
CotE Outer spore coat protein E (CotE) PF10628 IPR018901
CotH CotH protein PF08757 IPR014867
COX1 Cytochrome C and Quinol oxidase polypeptide I PF00115 IPR000883
COX15-CtaA Cytochrome oxidase assembly protein PF02628 IPR003780
COX17 Cytochrome C oxidase copper chaperone (COX17) PF05051 IPR007745
COX2 Cytochrome C oxidase subunit II, periplasmic domain PF00116 IPR002429
COX2-transmemb Cytochrome C oxidase subunit II, transmembrane PF09125 IPR015209
COX2_TM Cytochrome C oxidase subunit II, transmembrane domain PF02790 IPR011759
COX3 Cytochrome c oxidase subunit III PF00510 IPR000298
COX4 Cytochrome c oxidase subunit IV PF02936 IPR004203
COX4_pro Prokaryotic Cytochrome C oxidase subunit IV PF03626 IPR005171
COX4_pro_2 Bacterial aa3 type cytochrome c oxidase subunit IV PF07835 IPR012422
COX5A Cytochrome c oxidase subunit Va PF02284 IPR003204
COX5B Cytochrome c oxidase subunit Vb PF01215 IPR002124
COX5C Cytochrome c oxidase subunit Vc (COX5C) PF05799 IPR008432
COX6A Cytochrome c oxidase subunit VIa PF02046 IPR001349
COX6B Cytochrome oxidase c subunit VIb PF02297 IPR003213
COX6C Cytochrome c oxidase subunit VIc PF02937 IPR004204
COX7a Cytochrome c oxidase subunit VIIa PF02238 IPR003177
COX7B Cytochrome C oxidase chain VIIB PF05392 IPR008433
COX7C Cytochrome c oxidase subunit VIIc PF02935
COX8 Cytochrome oxidase c subunit VIII PF02285 IPR003205
COX9 Cytochrome c oxidase subunit COX9 PF09576 IPR014368
COXG Carbon monoxide dehydrogenase subunit G (CoxG) PF06240 IPR010419
CoxIIa Cytochrome c oxidase subunit IIa family PF08113 IPR012538
COX_ARM COX Aromatic Rich Motif PF06481 IPR010514
CO_deh_flav_C CO dehydrogenase flavoprotein C-terminal domain PF03450 IPR005107
CO_dh CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit PF02552 IPR003704
CP12 CP12 domain PF02672 IPR003823
CP2 CP2 transcription factor PF04516 IPR007604
CpcD CpcD/allophycocyanin linker domain PF01383 IPR008213
CPDase Cyclic phosphodiesterase-like protein PF07823 IPR012386
CpeS CpeS-like protein PF09367 IPR018536
CPL CPL (NUC119) domain PF08144 IPR012959
Cpl-7 Cpl-7 lysozyme C-terminal domain PF08230 IPR013168
Cpn10 Chaperonin 10 Kd subunit PF00166 IPR020818
Cpn60_TCP1 TCP-1/cpn60 chaperonin family PF00118 IPR002423
Cps15 Chromatin remodelling complex component cps15 PF05205
CPSase_L_chain Carbamoyl-phosphate synthase L chain, N-terminal domain PF00289 IPR005481
CPSase_L_D2 Carbamoyl-phosphate synthase L chain, ATP binding domain PF02786 IPR005479
CPSase_L_D3 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PF02787 IPR005480
CPSase_sm_chain Carbamoyl-phosphate synthase small chain, CPSase domain PF00988 IPR002474
CPSF_A CPSF A subunit region PF03178 IPR004871
CPT Chloramphenicol phosphotransferase-like protein PF07931 IPR012853
CPW_WPC Plasmodium falciparum domain of unknown function (CPW_WPC) PF09717 IPR006387
CR6_interact Growth arrest and DNA-damage-inducible proteins-interacting protein 1 PF10147 IPR018472
CRA Circumsporozoite-related antigen (CRA) PF06589 IPR009512
CRAL_TRIO CRAL/TRIO domain PF00650 IPR001251
CRAL_TRIO_N CRAL/TRIO, N-terminus PF03765 IPR008273
CRAM_rpt Cysteine-rich, acidic integral membrane protein precursor (CRAM) repeat PF07016 IPR009745
CRA_rpt Cytoplasmic repetitive antigen (CRA) like repeat PF07046 IPR009761
CRCB CrcB-like protein PF02537 IPR003691
CRC_subunit Chromatin remodelling complex subunit PF08624 IPR013933
CreA CreA protein PF05981 IPR010292
Creatinase_N Creatinase/Prolidase N-terminal domain PF01321 IPR000587
Creatininase Creatinine amidohydrolase PF02633 IPR003785
Creb_binding Creb binding PF09030 IPR014744
CreD Inner membrane protein CreD PF06123 IPR010364
CReP_N eIF2-alpha phosphatase phosphorylation constitutive repressor PF10472 IPR019512
CRF Corticotropin-releasing factor family PF00473 IPR000187
CRF-BP Corticotropin-releasing factor binding protein (CRF-BP) PF05428 IPR008435
CRF1 Transcription factor CRF1 PF10380 IPR018837
CRIC_ras_sig Connector enhancer of kinase suppressor of ras PF10534 IPR019555
Crinivirus_P26 Crinivirus P26 protein PF07416 IPR009985
Cript Microtubule-associated protein CRIPT PF10235 IPR019367
Crisp Crisp PF08562 IPR013871
CRISPR_assoc CRISPR associated protein PF08798 IPR010179
CRISPR_Cas2 CRISPR associated protein Cas2 PF09827 IPR019199
CRISPR_Cse1 CRISPR-associated protein Cse1 (CRISPR_cse1) PF09481 IPR013381
CRISPR_Cse2 CRISPR-associated protein Cse2 (CRISPR_cse2) PF09485 IPR013382
Crl Transcriptional regulator Crl PF07417 IPR009986
CRM1_C CRM1 C terminal PF08767 IPR014877
Cro Cro PF09048 IPR000655
Crp Bacterial regulatory proteins, crp family PF00325 IPR001808
CRPA Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) PF05745 IPR008436
CRPV_capsid CRPV capsid protein like PF08762 IPR014872
CRS1_YhbY CRS1 / YhbY (CRM) domain PF01985 IPR001890
CRT-like CRT-like PF08627 IPR013936
CRT10 CRT10 PF08728 IPR014839
CrtC Hydroxyneurosporene synthase (CrtC) PF07143 IPR010791
Crust_neurohorm Crustacean CHH/MIH/GIH neurohormone family PF01147 IPR001166
Crust_neuro_H Crustacean neurohormone H PF03858 IPR005558
CryBP1 CryBP1 protein PF07029 IPR009751
Crystall Beta/Gamma crystallin PF00030 IPR001064
Crystallin Alpha crystallin A chain, N terminal PF00525 IPR003090
CS CS domain PF04969 IPR017447
CsbD CsbD-like PF05532 IPR008462
CSD 'Cold-shock' DNA-binding domain PF00313 IPR002059
Cse1 Cse1 PF08506 IPR013713
CSE2 RNA polymerase II transcription mediator PF07544 IPR011425
CSF-1 Macrophage colony stimulating factor-1 (CSF-1) PF05337 IPR008001
CsgE Curli assembly protein CsgE PF10627 IPR018900
CsgG Curli production assembly/transport component CsgG PF03783 IPR005534
CsiD CsiD PF08943 IPR015038
CsoSCA Carboxysome Shell Carbonic Anhydrase PF08936 IPR014074
CsrA Global regulator protein family PF02599 IPR003751
CST-I Alpha-2,3-sialyltransferase (CST-I) PF06002 IPR009251
CstA Carbon starvation protein CstA PF02554 IPR003706
CT20 CT20 family PF07904 IPR012423
CtaG_Cox11 Cytochrome c oxidase assembly protein CtaG / Cox11 PF04442 IPR007533
Ctf8 Ctf8 PF09696 IPR018607
CTF_NFI CTF/NF-I family transcription modulation region PF00859 IPR000647
CTI Fatty acid cis/trans isomerase (CTI) PF06934 IPR010706
CtIP_N Tumour-suppressor protein CtIP N-terminal domain PF10482 IPR019518
CtnDOT_TraJ Homologues of TraJ from Bacteroides conjugative transposon PF07863 IPR012424
CTNNB1_binding N-terminal CTNNB1 binding PF08347 IPR013558
CTP-dep_RFKase Domain of unknown function DUF120 PF01982 IPR002834
CTP_synth_N CTP synthase N-terminus PF06418 IPR017456
CTP_transf_1 Cytidylyltransferase family PF01148 IPR000374
CTP_transf_2 Cytidylyltransferase PF01467 IPR004820
CTP_transf_3 Cytidylyltransferase PF02348 IPR003329
Ctr Ctr copper transporter family PF04145 IPR007274
CtsR Firmicute transcriptional repressor of class III stress genes (CtsR) PF05848 IPR008463
CTV_P13 Citrus tristeza virus P13 protein PF06922 IPR009692
CTV_P23 Citrus tristeza virus (CTV) P23 protein PF04808 IPR006893
CTV_P33 Citrus tristeza virus P33 protein PF07184 IPR010803
CTV_P6 Citrus tristeza virus 6-kDa protein PF06706 IPR009584
CTX_RstB CTX phage RstB protein PF07459 IPR010008
Cu-oxidase Multicopper oxidase PF00394 IPR001117
Cu-oxidase_2 Multicopper oxidase PF07731 IPR011706
Cu-oxidase_3 Multicopper oxidase PF07732 IPR011707
Cu-oxidase_4 Multi-copper polyphenol oxidoreductase laccase PF02578 IPR003730
Cu2_monooxygen Copper type II ascorbate-dependent monooxygenase, N-terminal domain PF01082 IPR000323
Cu2_monoox_C Copper type II ascorbate-dependent monooxygenase, C-terminal domain PF03712
CUB CUB domain PF00431 IPR000859
CUB_2 CUB-like domain PF02408 IPR003366
Cucumo_2B Cucumovirus protein 2B PF03263 IPR004946
Cucumo_coat Cucumovirus coat protein PF00760 IPR000247
CUE CUE domain PF02845 IPR003892
Cullin Cullin family PF00888 IPR001373
Cullin_Nedd8 Cullin protein neddylation domain PF10557 IPR019559
Cupin_1 Cupin PF00190 IPR006045
Cupin_2 Cupin domain PF07883 IPR013096
Cupin_3 Protein of unknown function (DUF861) PF05899 IPR008579
Cupin_4 Cupin superfamily protein PF08007
Cupin_5 Cupin superfamily (DUF985) PF06172 IPR009327
Curlin_rpt Curlin associated repeat PF07012 IPR009742
Curto_V2 Curtovirus V2 protein PF07325 IPR009931
Curto_V3 Curtovirus V3 protein PF07436 IPR009997
CUT CUT domain PF02376 IPR003350
Cut8 Cut8 PF08559 IPR013868
CutA1 CutA1 divalent ion tolerance protein PF03091 IPR004323
CutC CutC family PF03932 IPR005627
Cuticle_1 Crustacean cuticle protein repeat PF08140 IPR012539
Cuticle_2 Cuticle protein 7 isoform family PF08184 IPR012540
Cutinase Cutinase PF01083 IPR000675
Cu_amine_oxid Copper amine oxidase, enzyme domain PF01179 IPR015798
Cu_amine_oxidN1 Copper amine oxidase N-terminal domain PF07833 IPR012854
Cu_amine_oxidN2 Copper amine oxidase, N2 domain PF02727 IPR015800
Cu_amine_oxidN3 Copper amine oxidase, N3 domain PF02728 IPR015802
Cu_bind_like Plastocyanin-like domain PF02298 IPR003245
CVNH CVNH domain PF08881 IPR011058
Cw-hydrolase Cell wall-associated hydrolase PF10695 IPR019636
cwf18 cwf18 pre-mRNA splicing factor PF08315 IPR013169
cwf21 cwf21 PF08312 IPR013170
CwfJ_C_1 Protein similar to CwfJ C-terminus 1 PF04677 IPR006768
CwfJ_C_2 Protein similar to CwfJ C-terminus 2 PF04676 IPR006767
Cwf_Cwc_15 Cwf15/Cwc15 cell cycle control protein PF04889 IPR006973
CW_binding_1 Putative cell wall binding repeat PF01473 IPR002479
CW_binding_2 Putative cell wall binding repeat 2 PF04122 IPR007253
CX CX module PF01705 IPR002619
CXC Tesmin/TSO1-like CXC domain PF03638 IPR005172
CXCXC CXCXC repeat PF03128
CxxC_CxxC_SSSS Putative regulatory protein (CxxC_CxxC_SSSS) PF09723 IPR013429
Cyanate_lyase Cyanate lyase C-terminal domain PF02560 IPR003712
CybS CybS PF05328 IPR007992
Cyc-maltodext_C Cyclo-malto-dextrinase C-terminal domain PF10438 IPR019492
Cyc-maltodext_N Cyclomaltodextrinase, N-terminal PF09087 IPR015171
Cyclase Putative cyclase PF04199 IPR007325
Cyclase_polyket Polyketide synthesis cyclase PF04673 IPR006765
Cyclin Cyclin PF08613 IPR013922
Cyclin_C Cyclin, C-terminal domain PF02984 IPR004367
Cyclin_N Cyclin, N-terminal domain PF00134 IPR006671
Cyclotide Cyclotide family PF03784 IPR005535
Cyd_oper_YbgE Cyd operon protein YbgE (Cyd_oper_YbgE) PF09600 IPR011846
Cypo_polyhedrin Cypovirus polyhedrin protein PF05865 IPR008464
CysG_dimeriser Sirohaem synthase dimerisation region PF10414 IPR019478
Cystatin Cystatin domain PF00031 IPR000010
Cys_knot Cystine-knot domain PF00007 IPR006208
Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme PF01053 IPR000277
Cys_rich_FGFR Cysteine rich repeat PF00839 IPR001893
Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain PF00173 IPR001199
Cytadhesin_P30 Cytadhesin P30/P32 PF07271 IPR009896
CytB6-F_Fe-S Cytochrome B6-F complex Fe-S subunit PF08802 IPR014909
CYTH CYTH domain PF01928 IPR008172
Cytidylate_kin Cytidylate kinase PF02224 IPR011994
CytochromB561_N Cytochrome B561, N terminal PF09786 IPR019176
Cytochrome-c551 Photosystem P840 reaction-centre cytochrome c-551 PF10643 IPR019604
Cytochrom_B558a Cytochrome Cytochrome b558 alpha-subunit PF05038 IPR007732
Cytochrom_B559 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits PF00283 IPR013081
Cytochrom_B559a Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit PF00284 IPR013082
Cytochrom_B561 Eukaryotic cytochrome b561 PF03188 IPR004877
Cytochrom_B562 Cytochrome b562 PF07361 IPR009155
Cytochrom_B_C Cytochrome b(C-terminal)/b6/petD PF00032 IPR005798
Cytochrom_B_N Cytochrome b(N-terminal)/b6/petB PF00033 IPR005797
Cytochrom_C Cytochrome c PF00034 IPR003088
Cytochrom_C1 Cytochrome C1 family PF02167 IPR002326
Cytochrom_C552 Cytochrome c552 PF02335 IPR003321
Cytochrom_CIII Class III cytochrome C family PF02085 IPR020942
Cytochrom_C_2 Cytochrome C' PF01322 IPR002321
Cytochrom_C_asm Cytochrome C assembly protein PF01578 IPR002541
Cytochrom_D1 Cytochrome D1 heme domain PF02239
Cytochrom_NNT NapC/NirT cytochrome c family, N-terminal region PF03264 IPR005126
CytoC_RC Photosynthetic reaction centre cytochrome C subunit PF02276 IPR003158
Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding PF09265 IPR015345
Cytokin_check_N Cdc14 phosphatase binding protein N-terminus PF10407 IPR018844
Cytomega_gL Cytomegalovirus glycoprotein L PF01801 IPR002689
Cytomega_TRL10 Cytomegalovirus TRL10 protein PF06084 IPR009284
Cytomega_UL20A Cytomegalovirus UL20A protein PF05984 IPR009245
Cytomega_UL84 Cytomegalovirus UL84 protein PF06284 IPR010436
Cytomega_US3 Cytomegalovirus US3 protein PF05963 IPR009237
Cytotoxic Cytotoxic PF09000 IPR009105
Cyto_heme_lyase Cytochrome c/c1 heme lyase PF01265 IPR000511
Cyto_ox_2 Cytochrome oxidase subunit II PF02322 IPR003317
C_GCAxxG_C_C Putative redox-active protein (C_GCAxxG_C_C) PF09719 IPR010181
C_tripleX Cysteine rich repeat PF02363 IPR003341
D-aminoacyl_C D-aminoacylase, C-terminal region PF07908 IPR012855
D123 D123 PF07065 IPR009772
D5_N D5 N terminal like PF08706 IPR014818
Dabb Stress responsive A/B Barrel Domain PF07876 IPR013097
DAD DAD family PF02109 IPR003038
DAG1 Dystroglycan (Dystrophin-associated glycoprotein 1) PF05454 IPR008465
DAGAT Diacylglycerol acyltransferase PF03982 IPR007130
DAGK_acc Diacylglycerol kinase accessory domain PF00609 IPR000756
DAGK_cat Diacylglycerol kinase catalytic domain PF00781 IPR001206
DAGK_prokar Prokaryotic diacylglycerol kinase PF01219 IPR000829
DAHP_synth_1 DAHP synthetase I family PF00793 IPR006218
DAHP_synth_2 Class-II DAHP synthetase family PF01474 IPR002480
Dak1 Dak1 domain PF02733 IPR004006
Dak2 DAK2 domain PF02734 IPR004007
Dala_Dala_lig_C D-ala D-ala ligase C-terminus PF07478 IPR011095
Dala_Dala_lig_N D-ala D-ala ligase N-terminus PF01820 IPR011127
DALR_1 DALR anticodon binding domain PF05746 IPR008909
DALR_2 DALR domain PF09190 IPR015273
Dam DNA N-6-adenine-methyltransferase (Dam) PF05869 IPR008593
DAN DAN domain PF03045 IPR004133
DAO FAD dependent oxidoreductase PF01266 IPR006076
DAP10 DAP10 membrane protein PF07213 IPR009861
DAP3 Mitochondrial ribosomal death-associated protein 3 PF10236 IPR019368
DapB_C Dihydrodipicolinate reductase, C-terminus PF05173 IPR022663
DapB_N Dihydrodipicolinate reductase, N-terminus PF01113 IPR000846
DapD_N Tetrahydrodipicolinate succinyltransferase N-terminal PF08503 IPR013710
DAP_B D-aminopeptidase, domain B PF07930 IPR012856
DAP_C D-aminopeptidase, domain C PF07932 IPR012857
DAP_epimerase Diaminopimelate epimerase PF01678 IPR001653
DARPP-32 Protein phosphatase inhibitor 1/DARPP-32 PF05395 IPR008466
DASH_Ask1 DASH complex subunit Ask1 PF08655 IPR013964
DASH_Dad1 DASH complex subunit Dad1 PF08649 IPR013958
DASH_Dad2 DASH complex subunit Dad2 PF08654 IPR013963
DASH_Dad3 DASH complex subunit Dad3 PF08656 IPR013965
DASH_Dad4 DASH complex subunit Dad4 PF08650 IPR013959
DASH_Dam1 DASH complex subunit Dam1 PF08653 IPR013962
DASH_Duo1 DASH complex subunit Duo1 PF08651 IPR013960
DASH_Hsk3 DASH complex subunit Hsk3 like PF08227 IPR013183
DASH_Spc19 Spc19 PF08287 IPR013251
DASH_Spc34 DASH complex subunit Spc34 PF08657 IPR013966
Daxx Daxx Family PF03344 IPR005012
DB DB module PF01682 IPR002602
DBI_PRT Phosphoribosyltransferase PF02277 IPR003200
DBP10CT DBP10CT (NUC160) domain PF08147 IPR012541
DbpA DbpA RNA binding domain PF03880 IPR005580
DBR1 Lariat debranching enzyme, C-terminal domain PF05011 IPR007708
DCD 2'-deoxycytidine 5'-triphosphate deaminase (DCD) PF06559 IPR010550
dCMP_cyt_deam_1 Cytidine and deoxycytidylate deaminase zinc-binding region PF00383 IPR002125
dCMP_cyt_deam_2 Cytidine and deoxycytidylate deaminase zinc-binding region PF08211 IPR013171
DCP1 Dcp1-like decapping family PF06058 IPR010334
DCP2 Dcp2, box A domain PF05026 IPR007722
DcpS Scavenger mRNA decapping enzyme (DcpS) PF05652 IPR008594
DctM DctM-like transporters PF06808 IPR010656
DctQ Tripartite ATP-independent periplasmic transporters, DctQ component PF04290 IPR007387
DcuA_DcuB Anaerobic c4-dicarboxylate membrane transporter PF03605 IPR004668
DcuC C4-dicarboxylate anaerobic carrier PF03606 IPR018385
DCX Doublecortin PF03607 IPR003533
DC_STAMP DC-STAMP-like protein PF07782 IPR012858
DDA1 Det1 complexing ubiquitin ligase PF10172 IPR018276
DDDD Putative mitochondrial precursor protein PF10161 IPR018782
DDE DDE superfamily endonuclease PF03184 IPR004875
dDENN dDENN domain PF03455 IPR005112
DDHD DDHD domain PF02862 IPR004177
DDOST_48kD Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kD subunit PF03345 IPR005013
DDR Diol dehydratase / glycerol dehydratase reactivase large subunit PF08841 IPR009191
DDRGK DDRGK domain PF09756 IPR019153
DDT DDT domain PF02791 IPR004022
DEAD DEAD/DEAH box helicase PF00270 IPR011545
DEAD_2 DEAD_2 PF06733 IPR010614
DEAD_assoc DEAD/H associated PF08494 IPR013701
Death Death domain PF00531 IPR000488
Dec-1 Dec-1 repeat PF04624 IPR006718
DEC-1_C Dec-1 protein, C terminal region PF04626 IPR006720
DEC-1_N DEC-1 protein, N terminal region PF04625 IPR006719
Decorin_bind Decorin binding protein PF02352 IPR003332
DED Death effector domain PF01335 IPR001875
Ded_cyto Dedicator of cytokinesis PF06920 IPR010703
Defensin_1 Mammalian defensin PF00323 IPR006081
Defensin_2 Arthropod defensin PF01097 IPR001542
Defensin_3 Defensin-like peptide family PF08131 IPR012553
Defensin_beta Beta defensin PF00711 IPR001855
Defensin_propep Defensin propeptide PF00879 IPR002366
DegQ DegQ (SacQ) family PF08181 IPR012554
DegS Sensor protein DegS PF05384 IPR008595
DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family PF01041 IPR000653
DegV Uncharacterised protein, DegV family COG1307 PF02645 IPR003797
DehI Halocarboxylic acid dehydrogenase DehI PF10778 IPR019714
Dehyd-heme_bind Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding PF09098 IPR015182
Dehydratase_LU Dehydratase large subunit PF02286 IPR003206
Dehydratase_MU Dehydratase medium subunit PF02288 IPR003208
Dehydratase_SU Dehydratase small subunit PF02287 IPR003207
Dehydrin Dehydrin PF00257 IPR000167
DEK_C DEK C terminal domain PF08766 IPR014876
Deltaretro_Tax Deltaretrovirus Tax protein PF05599 IPR008596
Delta_lysin Delta lysin family PF05372 IPR008034
Deme6 Breast cancer protein PF10300 IPR019412
DENN DENN (AEX-3) domain PF02141 IPR001194
Denso_VP4 Capsid protein VP4 PF02336 IPR003433
DeoC DeoC/LacD family aldolase PF01791 IPR002915
DeoR Bacterial regulatory proteins, deoR family PF00455 IPR014036
DEP Domain found in Dishevelled, Egl-10, and Pleckstrin PF00610 IPR000591
DER1 Der1-like family PF04511 IPR007599
Desmo_N Viral Desmoplakin N-terminus PF06771 IPR009615
Destabilase Destabilase PF05497 IPR008597
Desulfoferrodox Desulfoferrodoxin PF01880 IPR002742
Desulfoferrod_N Desulfoferrodoxin, N-terminal domain PF06397 IPR004462
Det1 De-etiolated protein 1 Det1 PF09737 IPR019138
Dev_Cell_Death Development and cell death domain PF10539 IPR013989
DFDF DFDF motif PF09532 IPR019050
DFF-C DNA Fragmentation factor 45kDa, C terminal domain PF09033 IPR015121
DFF40 DNA fragmentation factor 40 kDa PF09230 IPR015311
DFP DNA / pantothenate metabolism flavoprotein PF04127 IPR007085
Dfp1_Him1_M Dfp1/Him1, central region PF08630 IPR013939
DGC DGC domain PF08859 IPR014958
DGCR6 DiGeorge syndrome critical region 6 (DGCR6) protein PF07324 IPR010849
DGOK 2-keto-3-deoxy-galactonokinase PF05035 IPR007729
DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase PF00926 IPR000422
DHC Dihaem cytochrome c PF09626 IPR018588
DHC_N1 Dynein heavy chain, N-terminal region 1 PF08385 IPR013594
DHC_N2 Dynein heavy chain, N-terminal region 2 PF08393 IPR013602
DHDPS Dihydrodipicolinate synthetase family PF00701 IPR002220
DHFR_1 Dihydrofolate reductase PF00186 IPR001796
DHFR_2 R67 dihydrofolate reductase PF06442 IPR009159
DHH DHH family PF01368 IPR001667
DHHA1 DHHA1 domain PF02272 IPR003156
DHHA2 DHHA2 domain PF02833 IPR004097
DHODB_Fe-S_bind Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PF10418 IPR019480
DHO_dh Dihydroorotate dehydrogenase PF01180 IPR012135
DHQS 3-dehydroquinate synthase (EC 4.6.1.3) PF01959 IPR002812
DHquinase_I Type I 3-dehydroquinase PF01487 IPR001381
DHquinase_II Dehydroquinase class II PF01220 IPR001874
DHQ_synthase 3-dehydroquinate synthase PF01761 IPR002658
Di19 Drought induced 19 protein (Di19) PF05605 IPR008598
Diacid_rec Putative sugar diacid recognition PF05651 IPR008599
DicB DicB protein PF05358 IPR008022
Dickkopf_N Dickkopf N-terminal cysteine-rich region PF04706 IPR006796
Dict-STAT-coil Dictyostelium STAT, coiled coil PF09267 IPR015347
Dicty_CAD Cell-cell adhesion domain PF05720 IPR008601
Dicty_CAR Slime mold cyclic AMP receptor PF05462
Dicty_CTDC Dictyostelium (slime mold) repeat PF00526 IPR001673
Dicty_REP Dictyostelium (Slime Mold) REP protein PF05086 IPR007778
Dicty_spore_N Dictyostelium spore coat protein, N terminus PF04562 IPR007643
DIE2_ALG10 DIE2/ALG10 family PF04922 IPR007006
DIL DIL domain PF01843 IPR018444
DIM DIM protein PF08194 IPR013172
DIM1 Mitosis protein DIM1 PF02966 IPR004123
Dimerisation Dimerisation domain PF08100 IPR012967
Dimeth_Pyl Dimethylamine methyltransferase (Dimeth_PyL) PF09505 IPR012653
DinB DinB family PF05163 IPR007837
DinI DinI-like family PF06183 IPR010391
Dioxygenase_C Dioxygenase PF00775 IPR000627
Dioxygenase_N Catechol dioxygenase N terminus PF04444 IPR007535
Diphthamide_syn Putative diphthamide synthesis protein PF01866 IPR002728
Diphtheria_C Diphtheria toxin, C domain PF02763 IPR022406
Diphtheria_R Diphtheria toxin, R domain PF01324 IPR022404
Diphtheria_T Diphtheria toxin, T domain PF02764 IPR022405
Dirigent Dirigent-like protein PF03018 IPR004265
DIRP DIRP PF06584 IPR010561
DisA-linker DisA bacterial checkpoint controller linker region PF10635 IPR018906
Disaggr_assoc Disaggregatase related PF08480 IPR013687
Disaggr_repeat Disaggregatase related repeat PF06848 IPR010671
DisA_N DisA bacterial checkpoint controller nucleotide-binding PF02457 IPR003390
Dishevelled Dishevelled specific domain PF02377 IPR003351
Disintegrin Disintegrin PF00200 IPR001762
DiS_P_DiS Bacterial Peptidase A24 N-terminal domain PF06750 IPR010627
DIT1_PvcA Pyoverdine/dityrosine biosynthesis protein PF05141 IPR007817
DivIC Septum formation initiator PF04977 IPR007060
DivIVA DivIVA protein PF05103 IPR007793
DIX DIX domain PF00778 IPR001158
DJ-1_PfpI DJ-1/PfpI family PF01965 IPR002818
DKCLD DKCLD (NUC011) domain PF08068 IPR012960
DLH Dienelactone hydrolase family PF01738 IPR002925
DLIC Dynein light intermediate chain (DLIC) PF05783
DltD_C DltD C-terminal region PF04914 IPR006998
DltD_M DltD central region PF04918 IPR007002
DltD_N DltD N-terminal region PF04915 IPR006999
DM DM DNA binding domain PF00751 IPR001275
DM13 Electron transfer DM13 PF10517 IPR019545
DM4_12 DM4/DM12 family PF07841 IPR006631
DMA DMRTA motif PF03474 IPR005173
DMAP1 DNA methyltransferase 1-associated protein 1 (DMAP1) PF05499 IPR008468
DMAP_binding DMAP1-binding Domain PF06464 IPR010506
DMP1 Dentin matrix protein 1 (DMP1) PF07263 IPR009889
DmpG_comm DmpG-like communication domain PF07836 IPR012425
DMPK_coil DMPK coiled coil domain like PF08826 IPR014930
DMRL_synthase 6,7-dimethyl-8-ribityllumazine synthase PF00885 IPR002180
DmsC DMSO reductase anchor subunit (DmsC) PF04976 IPR007059
Dna2 DNA replication factor Dna2 PF08696 IPR014808
DnaB DnaB-like helicase N terminal domain PF00772 IPR007693
DnaB_2 Replication initiation and membrane attachment protein (DnaB) PF07261 IPR006343
DnaB_bind DnaB-helicase binding domain of primase PF10410 IPR019475
DnaB_C DnaB-like helicase C terminal domain PF03796 IPR007694
DnaD DnaD-like domain PF04271
DnaG_DnaB_bind DNA primase DnaG DnaB-binding PF08278 IPR013173
DnaI_N Primosomal protein DnaI N-terminus PF07319 IPR009928
DnaJ DnaJ domain PF00226 IPR001623
DnaJ_C DnaJ C terminal region PF01556 IPR002939
DnaJ_CXXCXGXG DnaJ central domain (4 repeats) PF00684 IPR001305
DNApol3-delta_C DNA polymerase III, delta subunit, C terminal PF09115 IPR015199
DNAP_B_exo_N DNA polymerase family B exonuclease domain, N-terminal PF08452 IPR013660
DNase_II Deoxyribonuclease II PF03265 IPR004947
DNA_alkylation DNA alkylation repair enzyme PF08713 IPR014825
DNA_binding_1 6-O-methylguanine DNA methyltransferase, DNA binding domain PF01035 IPR014048
DNA_circ_N DNA circulation protein N-terminus PF07157 IPR009826
DNA_gyraseA_C DNA gyrase C-terminal domain, beta-propeller PF03989 IPR006691
DNA_gyraseB DNA gyrase B PF00204 IPR013506
DNA_gyraseB_C DNA gyrase B subunit, carboxyl terminus PF00986 IPR002288
DNA_III_psi DNA polymerase III psi subunit PF03603 IPR004615
DNA_ligase_aden NAD-dependent DNA ligase adenylation domain PF01653 IPR013839
DNA_ligase_A_C ATP dependent DNA ligase C terminal region PF04679 IPR012309
DNA_ligase_A_M ATP dependent DNA ligase domain PF01068 IPR012310
DNA_ligase_A_N DNA ligase N terminus PF04675 IPR012308
DNA_ligase_OB NAD-dependent DNA ligase OB-fold domain PF03120 IPR004150
DNA_ligase_ZBD NAD-dependent DNA ligase C4 zinc finger domain PF03119 IPR004149
DNA_methylase C-5 cytosine-specific DNA methylase PF00145 IPR001525
DNA_mis_repair DNA mismatch repair protein, C-terminal domain PF01119 IPR013507
DNA_pack_C Probable DNA packing protein, C-terminus PF02499 IPR003498
DNA_pack_N Probable DNA packing protein, N-terminus PF02500 IPR003499
DNA_photolyase DNA photolyase PF00875 IPR006050
DNA_pol3_alpha Bacterial DNA polymerase III alpha subunit PF07733 IPR011708
DNA_pol3_beta DNA polymerase III beta subunit, N-terminal domain PF00712 IPR022634
DNA_pol3_beta_2 DNA polymerase III beta subunit, central domain PF02767 IPR022637
DNA_pol3_beta_3 DNA polymerase III beta subunit, C-terminal domain PF02768 IPR022635
DNA_pol3_chi DNA polymerase III chi subunit, HolC PF04364 IPR007459
DNA_pol3_delta DNA polymerase III, delta subunit PF06144 IPR010372
DNA_pol3_theta DNA polymerase III, theta subunit PF06440 IPR009052
DNA_pol_A DNA polymerase family A PF00476 IPR001098
DNA_pol_B DNA polymerase family B PF00136 IPR006134
DNA_pol_B_2 DNA polymerase type B, organellar and viral PF03175 IPR004868
DNA_pol_B_3 DNA polymerase family B viral insert PF08408 IPR013617
DNA_pol_B_exo DNA polymerase family B, exonuclease domain PF03104 IPR006133
DNA_pol_delta_4 DNA polymerase delta, subunit 4 PF04081 IPR007218
DNA_pol_E_B DNA polymerase alpha/epsilon subunit B PF04042 IPR007185
DNA_pol_lambd_f Fingers domain of DNA polymerase lambda PF10391 IPR018944
DNA_pol_phi DNA polymerase phi PF04931 IPR007015
DNA_pol_viral_C DNA polymerase (viral) C-terminal domain PF00336 IPR001462
DNA_pol_viral_N DNA polymerase (viral) N-terminal domain PF00242 IPR000201
DNA_PPF DNA polymerase processivity factor PF02916 IPR004190
DNA_primase_lrg Eukaryotic and archaeal DNA primase, large subunit PF04104 IPR007238
DNA_primase_S Eukaryotic and archaeal DNA primase small subunit PF01896 IPR002755
DNA_processg_A DNA recombination-mediator protein A PF02481 IPR003488
DNA_RNApol_7kD DNA directed RNA polymerase, 7 kDa subunit PF03604
DNA_topoisoIV DNA gyrase/topoisomerase IV, subunit A PF00521 IPR002205
dNK Deoxynucleoside kinase PF01712 IPR002624
Dockerin_1 Dockerin type I repeat PF00404 IPR018242
Docking Erythronolide synthase docking PF08990 IPR015083
DOMON DOMON domain PF03351 IPR013050
DOPA_dioxygen Dopa 4,5-dioxygenase family PF08883 IPR014980
Dopey_N Dopey, N-terminal PF04118 IPR007249
Dor1 Dor1-like family PF04124 IPR007255
DOT1 Histone methylation protein DOT1 PF08123 IPR013110
Dot_icm_IcmQ Dot/Icm secretion system protein (dot_icm_IcmQ) PF09475 IPR013365
DoxA TQO small subunit DoxA PF07680 IPR011636
DoxD TQO small subunit DoxD PF04173 IPR007301
DoxX DoxX PF07681 IPR011637
DP Transcription factor DP PF08781 IPR014889
DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PF03330 IPR005132
DPM2 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) PF07297 IPR009914
DPM3 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) PF08285 IPR013174
DpmII DpmII restriction endonuclease PF04556 IPR007637
DPPF Uncharacterized conserved protein (DPPF) PF10237 IPR019369
DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-terminal region PF00930 IPR002469
DPRP Deoxyribodipyrimidine photolyase-related protein PF04244 IPR007357
Dpy-30 Dpy-30 motif PF05186 IPR007858
DRAT Dinitrogenase reductase ADP-ribosyltransferase (DRAT) PF07357 IPR009953
DREPP DREPP plasma membrane polypeptide PF05558 IPR008469
DREV DREV methyltransferase PF05219 IPR007884
Drf_DAD DRF Autoregulatory Domain PF06345 IPR010465
Drf_FH1 Formin Homology Region 1 PF06346 IPR009408
Drf_FH3 Diaphanous FH3 Domain PF06367 IPR010472
Drf_GBD Diaphanous GTPase-binding Domain PF06371 IPR010473
DRIM Down-regulated in metastasis PF07539 IPR011430
DRMBL DNA repair metallo-beta-lactamase PF07522 IPR011084
Drmip_Hesp Developmentally Regulated MAPK Interacting Protein PF10342
DRP Dam-replacing family PF06044 IPR010324
DrsE DsrE/DsrF-like family PF02635 IPR003787
DRTGG DRTGG domain PF07085 IPR010766
DRY_EERY Alternative splicing regulator PF09750 IPR019147
DS Deoxyhypusine synthase PF01916 IPR002773
DSBA DSBA-like thioredoxin domain PF01323 IPR001853
DsbB Disulfide bond formation protein DsbB PF02600 IPR003752
DsbC_N Disulfide bond isomerase protein N-terminus PF10411 IPR018950
DsbD Cytochrome C biogenesis protein transmembrane region PF02683 IPR003834
dsDNA_bind Double-stranded DNA-binding domain PF01984 IPR002836
DSHCT DSHCT (NUC185) domain PF08148 IPR012961
DSL Delta serrate ligand PF01414 IPR001774
DSL1 DSL1 PF08505 IPR013712
DSPc Dual specificity phosphatase, catalytic domain PF00782 IPR000340
DspF DspF/AvrF protein PF06704 IPR009583
DSRB Dextransucrase DSRB PF10781 IPR019717
DsrC DsrC like protein PF04358 IPR007453
DsrD Dissimilatory sulfite reductase D (DsrD) PF08679 IPR014793
DsrH DsrH like protein PF04077 IPR007215
dsrm Double-stranded RNA binding motif PF00035 IPR001159
dsRNA_bind Double stranded RNA binding domain PF03368 IPR005034
DSS1_SEM1 DSS1/SEM1 family PF05160 IPR007834
DSX_dimer Doublesex dimerisation domain PF08828 IPR014932
dTDP_sugar_isom dTDP-4-dehydrorhamnose 3,5-epimerase PF00908 IPR000888
DTHCT DTHCT (NUC029) region PF08070 IPR012542
DTW DTW domain PF03942 IPR005636
DUF1000 Domain of Unknown Function (DUF1000) PF06201 IPR010400
DUF1001 Protein of unknown function (DUF1001) PF06206 IPR010404
DUF1002 Protein of unknown function (DUF1002) PF06207 IPR009343
DUF1003 Protein of unknown function (DUF1003) PF06210 IPR010406
DUF1004 GAGA binding protein-like family PF06217 IPR010409
DUF1005 Protein of unknown function (DUF1005) PF06219 IPR010410
DUF1006 Protein of unknown function (DUF1006) PF06224 IPR009351
DUF1007 Protein of unknown function (DUF1007) PF06226 IPR010412
DUF1008 Protein of unknown function (DUF1008) PF06228 IPR010413
DUF1009 Protein of unknown function (DUF1009) PF06230 IPR010415
DUF101 Protein of unknown function DUF101 PF01951 IPR002804
DUF1010 Protein of unknown function (DUF1010) PF06231 IPR010416
DUF1011 Protein of unknown function (DUF1011) PF06237 IPR009357
DUF1012 Protein of unknown function (DUF1012) PF06241 IPR010420
DUF1013 Protein of unknown function (DUF1013) PF06242 IPR010421
DUF1014 Protein of unknown function (DUF1014) PF06244 IPR010422
DUF1015 Protein of unknown function (DUF1015) PF06245 IPR008323
DUF1016 Protein of unknown function (DUF1016) PF06250 IPR009362
DUF1017 SLBB-domain like (DUF1017) PF06251 IPR010425
DUF1018 Protein of unknown function (DUF1018) PF06252 IPR009363
DUF1019 Protein of unknown function (DUF1019) PF06254 IPR009364
DUF1020 Protein of unknown function (DUF1020) PF06255 IPR008106
DUF1021 Protein of unknown function (DUF1021) PF06257 IPR009366
DUF1022 Protein of unknown function (DUF1022) PF06258 IPR009367
DUF1023 Alpha/beta hydrolase of unknown function (DUF1023) PF06259 IPR010427
DUF1024 Protein of unknown function (DUF1024) PF06260 IPR009368
DUF1025 Domain of unknown function (DUF1025) PF06262 IPR010428
DUF1026 Protein of unknown function (DUF1026) PF06264
DUF1027 Protein of unknown function (DUF1027) PF06265 IPR009370
DUF1028 Family of unknown function (DUF1028) PF06267 IPR010430
DUF1029 Protein of unknown function (DUF1029) PF06269 IPR009372
DUF1030 Protein of unknown function (DUF1030) PF06270 IPR009373
DUF1031 Protein of unknown function (DUF1031) PF06275 IPR009376
DUF1032 Protein of unknown function (DUF1032) PF06278 IPR009378
DUF1033 Protein of unknown function (DUF1033) PF06279 IPR010434
DUF1034 Domain of Unknown Function (DUF1034) PF06280 IPR010435
DUF1035 Protein of unknown function (DUF1035) PF06281 IPR009379
DUF1036 Protein of unknown function (DUF1036) PF06282 IPR009380
DUF1037 Protein of unknown function (DUF1037) PF06283
DUF1038 Protein of unknown function (DUF1038) PF06285
DUF1039 Protein of unknown function (DUF1039) PF06287 IPR010437
DUF104 Protein of unknown function DUF104 PF01954 IPR008203
DUF1040 Protein of unknown function (DUF1040) PF06288 IPR009383
DUF1041 Domain of Unknown Function (DUF1041) PF06292 IPR010439
DUF1042 Domain of Unknown Function (DUF1042) PF06294 IPR010441
DUF1043 Protein of unknown function (DUF1043) PF06295 IPR009386
DUF1044 Protein of unknown function (DUF1044) PF06296
DUF1045 Protein of unknown function (DUF1045) PF06299 IPR009389
DUF1047 Protein of unknown function (DUF1047) PF06303 IPR009390
DUF1048 Protein of unknown function (DUF1048) PF06304 IPR008316
DUF1049 Protein of unknown function (DUF1049) PF06305 IPR010445
DUF1052 Protein of unknown function (DUF1052) PF06319 IPR009394
DUF1053 Domain of Unknown Function (DUF1053) PF06327 IPR009398
DUF1054 Protein of unknown function (DUF1054) PF06335 IPR009403
DUF1055 Domain of Unknown Function (DUF1055) PF06337 IPR006615
DUF1056 Protein of unknown function (DUF1056) PF06341 IPR009406
DUF1057 Alpha/beta hydrolase of unknown function (DUF1057) PF06342 IPR010463
DUF1059 Protein of unknown function (DUF1059) PF06348 IPR009409
DUF106 Integral membrane protein DUF106 PF01956 IPR002809
DUF1061 Protein of unknown function (DUF1061) PF06352
DUF1062 Protein of unknown function (DUF1062) PF06353 IPR009412
DUF1063 Protein of unknown function (DUF1063) PF06354
DUF1064 Protein of unknown function (DUF1064) PF06356 IPR009414
DUF1065 Protein of unknown function (DUF1065) PF06358 IPR010470
DUF1066 Protein of unknown function (DUF1066) PF06359
DUF1067 Protein of unknown function (DUF1067) PF06362 IPR009418
DUF1068 Protein of unknown function (DUF1068) PF06364 IPR010471
DUF1069 Protein of unknown function (DUF1069) PF06370 IPR009421
DUF1070 Protein of unknown function (DUF1070) PF06376 IPR009424
DUF1071 Protein of unknown function (DUF1071) PF06378 IPR009425
DUF1072 Protein of unknown function (DUF1072) PF06380 IPR009426
DUF1073 Protein of unknown function (DUF1073) PF06381
DUF1074 Protein of unknown function (DUF1074) PF06382
DUF1075 Protein of unknown function (DUF1075) PF06388 IPR009432
DUF1076 Protein of unknown function (DUF1076) PF06416 IPR010489
DUF1077 Protein of unknown function (DUF1077) PF06417 IPR009445
DUF1078 Domain of unknown function (DUF1078) PF06429 IPR010930
DUF1079 Repeat of unknown function (DUF1079) PF06435 IPR010494
DUF108 Domain of unknown function DUF108 PF01958 IPR002811
DUF1080 Domain of Unknown Function (DUF1080) PF06439 IPR010496
DUF1081 Domain of Unknown Function (DUF1081) PF06448 IPR009454
DUF1082 Mitochondrial domain of unknown function (DUF1082) PF06449 IPR009455
DUF1083 Domain of unknown function (DUF1083) PF06452 IPR010502
DUF1084 Protein of unknown function (DUF1084) PF06454 IPR009457
DUF1086 Domain of Unknown Function (DUF1086) PF06461 IPR009462
DUF1087 Domain of Unknown Function (DUF1087) PF06465 IPR009463
DUF1088 Domain of Unknown Function (DUF1088) PF06469 IPR010508
DUF1089 Protein of unknown function (DUF1089) PF06475 IPR009467
DUF1090 Protein of unknown function (DUF1090) PF06476 IPR009468
DUF1091 Protein of unknown function (DUF1091) PF06477 IPR010512
DUF1092 Protein of unknown function (DUF1092) PF06485 IPR009472
DUF1093 Protein of unknown function (DUF1093) PF06486 IPR006542
DUF1094 Protein of unknown function (DUF1094) PF06491 IPR009474
DUF1096 Protein of unknown function (DUF1096) PF06493 IPR009475
DUF1097 Protein of unknown function (DUF1097) PF06496 IPR009476
DUF1098 Protein of unknown function (DUF1098) PF06497 IPR009477
DUF11 Domain of unknown function DUF11 PF01345 IPR001434
DUF1100 Alpha/beta hydrolase of unknown function (DUF1100) PF06500 IPR010520
DUF1101 Protein of unknown function (DUF1101) PF06503 IPR010521
DUF1102 Protein of unknown function (DUF1102) PF06510 IPR009482
DUF1103 Repeat of unknown function (DUF1103) PF06513 IPR009484
DUF1104 Protein of unknown function (DUF1104) PF06518 IPR009488
DUF1105 Protein of unknown function (DUF1105) PF06520
DUF1106 Protein of unknown function (DUF1106) PF06523 IPR009490
DUF1107 Protein of unknown function (DUF1107) PF06526 IPR009491
DUF1108 Protein of unknown function (DUF1108) PF06531 IPR009494
DUF1109 Protein of unknown function (DUF1109) PF06532 IPR009495
DUF111 Protein of unknown function DUF111 PF01969 IPR002822
DUF1110 Protein of unknown function (DUF1110) PF06533 IPR010535
DUF1111 Protein of unknown function (DUF1111) PF06537 IPR010538
DUF1112 Protein of unknown function (DUF1112) PF06539
DUF1113 Protein of unknown function (DUF1113) PF06541 IPR010540
DUF1114 Protein of unknown function (DUF1114) PF06542 IPR009497
DUF1115 Protein of unknown function (DUF1115) PF06544
DUF1116 Protein of unknown function (DUF1116) PF06545 IPR009499
DUF1117 Protein of unknown function (DUF1117) PF06547 IPR010543
DUF1118 Protein of unknown function (DUF1118) PF06549 IPR009500
DUF1119 Protein of unknown function (DUF1119) PF06550 IPR010545
DUF112 Integral membrane protein DUF112 PF01970 IPR002823
DUF1120 Protein of unknown function (DUF1120) PF06551 IPR010546
DUF1121 Protein of unknown function (DUF1121) PF06555
DUF1122 Protein of unknown function (DUF1122) PF06557 IPR008304
DUF1123 Protein of unknown function (DUF1123) PF06561
DUF1125 Protein of unknown function (DUF1125) PF06563 IPR009503
DUF1126 Repeat of unknown function (DUF1126) PF06565 IPR010554
DUF1127 Domain of unknown function (DUF1127) PF06568 IPR009506
DUF1128 Protein of unknown function (DUF1128) PF06569 IPR009507
DUF1129 Protein of unknown function (DUF1129) PF06570
DUF1130 Protein of unknown function (DUF1130) PF06571
DUF1131 Protein of unknown function (DUF1131) PF06572 IPR010938
DUF1132 Protein of unknown function (DUF1132) PF06575 IPR009509
DUF1133 Protein of unknown function (DUF1133) PF06576 IPR010557
DUF1134 Protein of unknown function (DUF1134) PF06577 IPR008325
DUF1135 Protein of unknown function (DUF1135) PF06581 IPR009511
DUF1136 Repeat of unknown function (DUF1136) PF06582 IPR010939
DUF1137 Protein of unknown function (DUF1137) PF06587 IPR010564
DUF1138 Protein of unknown function (DUF1138) PF06592 IPR009515
DUF1139 Protein of unknown function (DUF1139) PF06599 IPR009519
DUF114 Protein of unknown function DUF114 PF01972 IPR002825
DUF1140 Protein of unknown function (DUF1140) PF06600 IPR009520
DUF1141 Protein of unknown function (DUF1141) PF06603 IPR010570
DUF1142 Protein of unknown function (DUF1142) PF06605 IPR010572
DUF1143 Protein of unknown function (DUF1143) PF06608 IPR009524
DUF1144 Protein of unknown function (DUF1144) PF06610 IPR010574
DUF1145 Protein of unknown function (DUF1145) PF06611 IPR009525
DUF1146 Protein of unknown function (DUF1146) PF06612 IPR009526
DUF1147 Protein of unknown function (DUF1147) PF06615 IPR009527
DUF1148 Protein of unknown function (DUF1148) PF06618 IPR009529
DUF1149 Protein of unknown function (DUF1149) PF06619 IPR009530
DUF115 Protein of unknown function DUF115 PF01973 IPR002826
DUF1150 Protein of unknown function (DUF1150) PF06620 IPR009531
DUF1151 Protein of unknown function (DUF1151) PF06625 IPR009533
DUF1152 Protein of unknown function (DUF1152) PF06626 IPR010581
DUF1153 Protein of unknown function (DUF1153) PF06627 IPR009534
DUF1154 Protein of unknown function (DUF1154) PF06631 IPR009535
DUF1155 Protein of unknown function (DUF1155) PF06633 IPR009536
DUF1156 Protein of unknown function (DUF1156) PF06634 IPR009537
DUF1157 Protein of unknown function (DUF1157) PF06636 IPR010587
DUF1158 Protein of unknown function (DUF1158) PF06643 IPR010590
DUF116 Protein of unknown function DUF116 PF01976 IPR002829
DUF1160 Protein of unknown function (DUF1160) PF06648 IPR010594
DUF1161 Protein of unknown function (DUF1161) PF06649 IPR010595
DUF1162 Protein of unknown function (DUF1162) PF06650 IPR009543
DUF1163 Protein of unknown function (DUF1163) PF06651 IPR009544
DUF1164 Protein of unknown function (DUF1164) PF06653 IPR009545
DUF1167 Protein of unknown function (DUF1167) PF06657 IPR010597
DUF1168 Protein of unknown function (DUF1168) PF06658 IPR009548
DUF1170 Protein of unknown function (DUF1170) PF06663 IPR010599
DUF1171 Protein of unknown function (DUF1171) PF06664
DUF1173 Protein of unknown function (DUF1173) PF06666 IPR009553
DUF1174 Repeat of unknown function (DUF1174) PF06671 IPR009557
DUF1175 Protein of unknown function (DUF1175) PF06672 IPR009558
DUF1176 Protein of unknown function (DUF1176) PF06674 IPR009560
DUF1177 Protein of unknown function (DUF1177) PF06675 IPR009561
DUF1178 Protein of unknown function (DUF1178) PF06676 IPR009562
DUF1179 Protein of unknown function (DUF1179) PF06678 IPR009564
DUF1180 Protein of unknown function (DUF1180) PF06679 IPR009565
DUF1181 Protein of unknown function (DUF1181) PF06680 IPR009566
DUF1182 Protein of unknown function (DUF1182) PF06681 IPR010601
DUF1183 Protein of unknown function (DUF1183) PF06682 IPR009567
DUF1184 Protein of unknown function (DUF1184) PF06683 IPR009568
DUF1185 Protein of unknown function (DUF1185) PF06684 IPR009569
DUF1186 Protein of unknown function (DUF1186) PF06685 IPR010602
DUF1187 Protein of unknown function (DUF1187) PF06688 IPR009572
DUF1188 Protein of unknown function (DUF1188) PF06690 IPR009573
DUF1189 Protein of unknown function (DUF1189) PF06691 IPR009574
DUF1190 Protein of unknown function (DUF1190) PF06693 IPR009576
DUF1191 Protein of unknown function (DUF1191) PF06697 IPR010605
DUF1192 Protein of unknown function (DUF1192) PF06698 IPR009579
DUF1193 Protein of unknown function (DUF1193) PF06702
DUF1194 Protein of unknown function (DUF1194) PF06707 IPR010607
DUF1195 Protein of unknown function (DUF1195) PF06708 IPR010608
DUF1196 Protein of unknown function (DUF1196) PF06709 IPR009585
DUF1197 Protein of unknown function (DUF1197) PF06710
DUF1198 Protein of unknown function (DUF1198) PF06711 IPR009587
DUF1199 Protein of unknown function (DUF1199) PF06712 IPR009588
DUF1200 Protein of unknown function (DUF1200) PF06713 IPR009589
DUF1201 Protein of unknown function (DUF1201) PF06716 IPR009591
DUF1202 Protein of unknown function (DUF1202) PF06717 IPR009592
DUF1203 Protein of unknown function (DUF1203) PF06718 IPR009593
DUF1204 Protein of unknown function (DUF1204) PF06721 IPR009596
DUF1205 Protein of unknown function (DUF1205) PF06722 IPR010610
DUF1206 Domain of Unknown Function (DUF1206) PF06724 IPR009597
DUF1207 Protein of unknown function (DUF1207) PF06727 IPR009599
DUF1208 Protein of unknown function (DUF1208) PF06730 IPR009602
DUF121 Protein of unknown function DUF121 PF01983 IPR002835
DUF1210 Protein of unknown function (DUF1210) PF06735
DUF1211 Protein of unknown function (DUF1211) PF06736 IPR010617
DUF1212 Protein of unknown function (DUF1212) PF06738 IPR010619
DUF1213 Protein of unknown function (DUF1213) PF06740 IPR009603
DUF1214 Protein of unknown function (DUF1214) PF06742 IPR010621
DUF1215 Protein of unknown function (DUF1215) PF06744 IPR010623
DUF1216 Protein of unknown function (DUF1216) PF06746 IPR009605
DUF1217 Protein of unknown function (DUF1217) PF06748 IPR010626
DUF1218 Protein of unknown function (DUF1218) PF06749 IPR009606
DUF1219 Protein of unknown function (DUF1219) PF06755 IPR009610
DUF1220 Repeat of unknown function (DUF1220) PF06758 IPR010630
DUF1221 Protein of unknown function (DUF1221) PF06760 IPR010632
DUF1222 Protein of unknown function (DUF1222) PF06762 IPR009613
DUF1223 Protein of unknown function (DUF1223) PF06764 IPR010634
DUF1225 Protein of unknown function (DUF1225) PF06774
DUF1227 Protein of unknown function (DUF1227) PF06777 IPR010643
DUF1228 Protein of unknown function (DUF1228) PF06779 IPR010645
DUF1229 Protein of unknown function (DUF1229) PF06797 IPR009630
DUF123 Domain of unknown function DUF123 PF01986 IPR002837
DUF1230 Protein of unknown function (DUF1230) PF06799 IPR009631
DUF1231 Protein of unknown function (DUF1231) PF06802 IPR009633
DUF1232 Protein of unknown function (DUF1232) PF06803 IPR010652
DUF1233 Putative excisionase (DUF1233) PF06806 IPR009634
DUF1234 Alpha/Beta hydrolase family of unknown function (DUF1234) PF06821 IPR010662
DUF1235 Protein of unknown function (DUF1235) PF06822 IPR009641
DUF1236 Protein of unknown function (DUF1236) PF06823 IPR009642
DUF1237 Protein of unknown function (DUF1237) PF06824 IPR008313
DUF1239 Protein of unknown function (DUF1239) PF06835 IPR010664
DUF124 Protein of unknown function DUF124 PF01987 IPR002838
DUF1240 Protein of unknown function (DUF1240) PF06836 IPR010665
DUF1241 Protein of unknown function (DUF1241) PF06840 IPR009652
DUF1242 Protein of unknown function (DUF1242) PF06842 IPR009653
DUF1244 Protein of unknown function (DUF1244) PF06844 IPR009654
DUF1246 Protein of unknown function (DUF1246) PF06849 IPR010672
DUF1247 Protein of unknown function (DUF1247) PF06851 IPR009657
DUF1248 Protein of unknown function (DUF1248) PF06852 IPR009658
DUF1249 Protein of unknown function (DUF1249) PF06853 IPR009659
DUF125 Integral membrane protein DUF125 PF01988 IPR008217
DUF1250 Protein of unknown function (DUF1250) PF06855 IPR010673
DUF1251 Protein of unknown function (DUF1251) PF06856 IPR009661
DUF1252 Protein of unknown function (DUF1252) PF06860
DUF1253 Protein of unknown function (DUF1253) PF06862 IPR010678
DUF1254 Protein of unknown function (DUF1254) PF06863 IPR010679
DUF1255 Protein of unknown function (DUF1255) PF06865 IPR009664
DUF1256 Protein of unknown function (DUF1256) PF06866 IPR009665
DUF1257 Protein of unknown function (DUF1257) PF06868 IPR009666
DUF1258 Protein of unknown function (DUF1258) PF06869 IPR009667
DUF126 Protein of unknown function DUF126 PF01989 IPR002840
DUF1260 Protein of unknown function (DUF1260) PF06877 IPR009671
DUF1261 Protein of unknown function (DUF1261) PF06879 IPR009673
DUF1262 Protein of unknown function (DUF1262) PF06880 IPR010683
DUF1263 Protein of unknown function (DUF1263) PF06882 IPR010685
DUF1264 Protein of unknown function (DUF1264) PF06884 IPR010686
DUF1265 Protein of unknown function (DUF1265) PF06887 IPR009676
DUF1266 Protein of unknown function (DUF1266) PF06889 IPR009677
DUF1267 Protein of unknown function (DUF1267) PF06895 IPR009680
DUF1268 Protein of unknown function (DUF1268) PF06896 IPR009681
DUF1269 Protein of unknown function (DUF1269) PF06897 IPR009200
DUF127 Protein of unknown function DUF127 PF01994 IPR002845
DUF1270 Protein of unknown function (DUF1270) PF06900 IPR009682
DUF1271 Protein of unknown function (DUF1271) PF06902 IPR010693
DUF1272 Protein of unknown function (DUF1272) PF06906 IPR010696
DUF1273 Protein of unknown function (DUF1273) PF06908 IPR010697
DUF1274 Protein of unknown function (DUF1274) PF06909
DUF1275 Protein of unknown function (DUF1275) PF06912 IPR010699
DUF1277 Protein of unknown function (DUF1277) PF06914
DUF1278 Protein of unknown function (DUF1278) PF06915 IPR010701
DUF1279 Protein of unknown function (DUF1279) PF06916 IPR009688
DUF128 Domain of unknown function DUF128 PF01995 IPR002846
DUF1280 Protein of unknown function (DUF1280) PF06918 IPR009689
DUF1281 Protein of unknown function (DUF1281) PF06924 IPR009694
DUF1282 Protein of unknown function (DUF1282) PF06930 IPR009698
DUF1283 Protein of unknown function (DUF1283) PF06932 IPR009700
DUF1284 Protein of unknown function (DUF1284) PF06935 IPR009702
DUF1285 Protein of unknown function (DUF1285) PF06938 IPR010707
DUF1286 Protein of unknown function (DUF1286) PF06939 IPR009705
DUF1287 Protein of unknown function (DUF1287) PF06940 IPR009706
DUF1288 Protein of unknown function (DUF1288) PF06944
DUF1289 Protein of unknown function (DUF1289) PF06945 IPR010710
DUF1290 Protein of unknown function (DUF1290) PF06947 IPR009709
DUF1291 Protein of unknown function (DUF1291) PF06948
DUF1292 Protein of unknown function (DUF1292) PF06949 IPR009711
DUF1293 Protein of unknown function (DUF1293) PF06950 IPR009712
DUF1294 Protein of unknown function (DUF1294) PF06961 IPR010718
DUF1295 Protein of unknown function (DUF1295) PF06966 IPR010721
DUF1296 Protein of unknown function (DUF1296) PF06972 IPR009719
DUF1297 Protein of unknown function (DUF1297) PF06973 IPR009720
DUF1298 Protein of unknown function (DUF1298) PF06974 IPR009721
DUF1299 Protein of unknown function (DUF1299) PF06975 IPR010725
DUF13 Domain of unknown function DUF13 PF01482 IPR002485
DUF130 Domain of unknown function DUF130 PF02343 IPR003326
DUF1301 Protein of unknown function (DUF1301) PF06979 IPR009724
DUF1302 Protein of unknown function (DUF1302) PF06980 IPR010727
DUF1303 Protein of unknown function (DUF1303) PF06987
DUF1304 Protein of unknown function (DUF1304) PF06993 IPR009732
DUF1305 Protein of unknown function (DUF1305) PF06996 IPR010732
DUF1306 Protein of unknown function (DUF1306) PF06997
DUF1307 Protein of unknown function (DUF1307) PF06998 IPR009736
DUF1308 Protein of unknown function (DUF1308) PF07000 IPR010733
DUF1309 Protein of unknown function (DUF1309) PF07004 IPR010736
DUF131 Protein of unknown function DUF131 PF01998 IPR002849
DUF1310 Protein of unknown function (DUF1310) PF07006 IPR010738
DUF1311 Protein of unknown function (DUF1311) PF07007 IPR009739
DUF1312 Protein of unknown function (DUF1312) PF07009 IPR010739
DUF1313 Protein of unknown function (DUF1313) PF07011 IPR009741
DUF1314 Protein of unknown function (DUF1314) PF07013 IPR010741
DUF1315 Protein of unknown function (DUF1315) PF07023 IPR009749
DUF1317 Protein of unknown function (DUF1317) PF07026 IPR009750
DUF1318 Protein of unknown function (DUF1318) PF07027 IPR008309
DUF1319 Protein of unknown function (DUF1319) PF07028 IPR010746
DUF1320 Protein of unknown function (DUF1320) PF07030 IPR009752
DUF1321 Protein of unknown function (DUF1321) PF07031
DUF1322 Protein of unknown function (DUF1322) PF07032 IPR009753
DUF1323 Protein of unknown function (DUF1323) PF07037 IPR010749
DUF1324 Protein of unknown function (DUF1324) PF07038 IPR009757
DUF1325 Protein of unknown function (DUF1325) PF07039 IPR010750
DUF1326 Protein of unknown function (DUF1326) PF07040 IPR009758
DUF1327 Protein of unknown function (DUF1327) PF07041 IPR009759
DUF1328 Protein of unknown function (DUF1328) PF07043 IPR009760
DUF1329 Protein of unknown function (DUF1329) PF07044 IPR010752
DUF1330 Protein of unknown function (DUF1330) PF07045 IPR010753
DUF1331 Protein of unknown function (DUF1331) PF07048 IPR009762
DUF1332 Protein of unknown function (DUF1332) PF07049
DUF1333 Protein of unknown function (DUF1333) PF07050
DUF1335 Protein of unknown function (DUF1335) PF07056 IPR009766
DUF1336 Protein of unknown function (DUF1336) PF07059 IPR009769
DUF1338 Protein of unknown function (DUF1338) PF07063 IPR009770
DUF134 Protein of unknown function DUF134 PF02001 IPR002852
DUF1340 Protein of unknown function (DUF1340) PF07067 IPR009774
DUF1341 Protein of unknown function (DUF1341) PF07071 IPR010763
DUF1342 Protein of unknown function (DUF1342) PF07072 IPR009777
DUF1343 Protein of unknown function (DUF1343) PF07075 IPR008302
DUF1344 Protein of unknown function (DUF1344) PF07076 IPR009780
DUF1345 Protein of unknown function (DUF1345) PF07077 IPR009781
DUF1347 Protein of unknown function (DUF1347) PF07079 IPR010764
DUF1348 Protein of unknown function (DUF1348) PF07080 IPR009783
DUF1349 Protein of unknown function (DUF1349) PF07081 IPR009784
DUF1350 Protein of unknown function (DUF1350) PF07082 IPR010765
DUF1351 Protein of unknown function (DUF1351) PF07083 IPR009785
DUF1352 Protein of unknown function (DUF1352) PF07086 IPR009787
DUF1353 Protein of unknown function (DUF1353) PF07087 IPR010767
DUF1355 Protein of unknown function (DUF1355) PF07090 IPR010768
DUF1356 Protein of unknown function (DUF1356) PF07092 IPR009790
DUF1357 Protein of unknown function (DUF1357) PF07094 IPR009791
DUF1358 Protein of unknown function (DUF1358) PF07096 IPR009792
DUF1359 Protein of unknown function (DUF1359) PF07097 IPR010772
DUF1360 Protein of unknown function (DUF1360) PF07098 IPR010773
DUF1361 Protein of unknown function (DUF1361) PF07099 IPR009793
DUF1362 Protein of unknown function (DUF1362) PF07100 IPR009794
DUF1363 Protein of unknown function (DUF1363) PF07101 IPR009795
DUF1364 Protein of unknown function (DUF1364) PF07102 IPR010774
DUF1365 Protein of unknown function (DUF1365) PF07103 IPR010775
DUF1366 Protein of unknown function (DUF1366) PF07104 IPR009796
DUF1367 Protein of unknown function (DUF1367) PF07105 IPR009797
DUF1368 Protein of unknown function (DUF1368) PF07112 IPR010778
DUF137 Protein of unknown function DUF137 PF02006 IPR002855
DUF1370 Protein of unknown function (DUF1370) PF07114 IPR009801
DUF1371 Protein of unknown function (DUF1371) PF07115 IPR009802
DUF1372 Protein of unknown function (DUF1372) PF07116 IPR010779
DUF1373 Protein of unknown function (DUF1373) PF07117 IPR009803
DUF1374 Protein of unknown function (DUF1374) PF07118 IPR009804
DUF1375 Protein of unknown function (DUF1375) PF07119 IPR010780
DUF1376 Protein of unknown function (DUF1376) PF07120 IPR010781
DUF1378 Protein of unknown function (DUF1378) PF07125 IPR009808
DUF1379 Protein of unknown function (DUF1379) PF07126 IPR009809
DUF1380 Protein of unknown function (DUF1380) PF07128 IPR009811
DUF1381 Protein of unknown function (DUF1381) PF07129 IPR009812
DUF1382 Protein of unknown function (DUF1382) PF07131 IPR009814
DUF1383 Protein of unknown function (DUF1383) PF07134 IPR010785
DUF1385 Protein of unknown function (DUF1385) PF07136 IPR010787
DUF1386 Protein of unknown function (DUF1386) PF07138 IPR009815
DUF1387 Protein of unknown function (DUF1387) PF07139 IPR009816
DUF1388 Repeat of unknown function (DUF1388) PF07142 IPR010790
DUF1389 Protein of unknown function (DUF1389) PF07146 IPR010792
DUF1390 Protein of unknown function (DUF1390) PF07150 IPR009820
DUF1391 Protein of unknown function (DUF1391) PF07151 IPR009821
DUF1392 Protein of unknown function (DUF1392) PF07154 IPR009824
DUF1393 Protein of unknown function (DUF1393) PF07155 IPR009825
DUF1394 Protein of unknown function (DUF1394) PF07159
DUF1395 Protein of unknown function (DUF1395) PF07160 IPR009829
DUF1396 Protein of unknown function (DUF1396) PF07161 IPR009830
DUF1397 Protein of unknown function (DUF1397) PF07165 IPR009832
DUF1398 Protein of unknown function (DUF1398) PF07166 IPR009833
DUF1399 Protein of unknown function (DUF1399) PF07173 IPR009836
DUF140 Domain of unknown function DUF140 PF02405 IPR003453
DUF1400 Alpha/beta hydrolase of unknown function (DUF1400) PF07176 IPR010802
DUF1401 Protein of unknown function (DUF1401) PF07180 IPR020357
DUF1402 Protein of unknown function (DUF1402) PF07182 IPR009842
DUF1403 Protein of unknown function (DUF1403) PF07183 IPR009843
DUF1404 Protein of unknown function (DUF1404) PF07185 IPR009844
DUF1405 Protein of unknown function (DUF1405) PF07187 IPR009845
DUF1406 Protein of unknown function (DUF1406) PF07190 IPR010806
DUF1407 Protein of unknown function (DUF1407) PF07191 IPR010807
DUF1408 Protein of unknown function (DUF1408) PF07193 IPR009848
DUF1409 Protein of unknown function (DUF1409) PF07197 IPR010811
DUF1410 DUF1410 domain PF07198 IPR009849
DUF1411 Protein of unknown function (DUF1411) PF07199 IPR009850
DUF1412 Protein of unknown function (DUF1412) PF07203 IPR009853
DUF1413 Protein of unknown function (DUF1413) PF07205 IPR010813
DUF1414 Protein of unknown function (DUF1414) PF07208 IPR009857
DUF1415 Protein of unknown function (DUF1415) PF07209 IPR009858
DUF1416 Protein of unknown function (DUF1416) PF07210 IPR010814
DUF1417 Protein of unknown function (DUF1417) PF07211
DUF1418 Protein of unknown function (DUF1418) PF07214 IPR010815
DUF1419 Protein of unknown function (DUF1419) PF07215 IPR009862
DUF1420 Protein of unknown function (DUF1420) PF07220 IPR010818
DUF1421 Protein of unknown function (DUF1421) PF07223 IPR010820
DUF1422 Protein of unknown function (DUF1422) PF07226 IPR009867
DUF1423 Protein of unknown function (DUF1423) PF07227 IPR004082
DUF1424 Putative rep protein (DUF1424) PF07232 IPR009870
DUF1425 Protein of unknown function (DUF1425) PF07233 IPR010824
DUF1426 Protein of unknown function (DUF1426) PF07234 IPR009871
DUF1427 Protein of unknown function (DUF1427) PF07235 IPR009872
DUF1428 Protein of unknown function (DUF1428) PF07237 IPR009874
DUF1429 Protein of unknown function (DUF1429) PF07241
DUF143 Domain of unknown function DUF143 PF02410 IPR004394
DUF1430 Protein of unknown function (DUF1430) PF07242 IPR006541
DUF1431 Protein of unknown function (DUF1431) PF07248 IPR006611
DUF1433 Protein of unknown function (DUF1433) PF07252 IPR009881
DUF1434 Protein of unknown function (DUF1434) PF07254 IPR009883
DUF1435 Protein of unknown function (DUF1435) PF07256 IPR009885
DUF1436 Protein of unknown function (DUF1436) PF07262 IPR009888
DUF1438 Protein of unknown function (DUF1438) PF07270 IPR009895
DUF1439 Protein of unknown function (DUF1439) PF07273 IPR010835
DUF1440 Protein of unknown function (DUF1440) PF07274 IPR009898
DUF1441 Protein of unknown function (DUF1441) PF07278 IPR009901
DUF1442 Protein of unknown function (DUF1442) PF07279 IPR009902
DUF1443 Protein of unknown function (DUF1443) PF07280 IPR009903
DUF1444 Protein of unknown function (DUF1444) PF07285 IPR010838
DUF1445 Protein of unknown function (DUF1445) PF07286 IPR009906
DUF1446 Protein of unknown function (DUF1446) PF07287 IPR010839
DUF1447 Protein of unknown function (DUF1447) PF07288 IPR009907
DUF1448 Protein of unknown function (DUF1448) PF07289 IPR006606
DUF1449 Protein of unknown function (DUF1449) PF07290 IPR010840
DUF1450 Protein of unknown function (DUF1450) PF07293 IPR009910
DUF1451 Protein of unknown function (DUF1451) PF07295 IPR009912
DUF1452 Protein of unknown function (DUF1452) PF07300
DUF1453 Protein of unknown function (DUF1453) PF07301 IPR009916
DUF1454 Protein of unknown function (DUF1454) PF07305 IPR009918
DUF1455 Protein of unknown function (DUF1455) PF07306 IPR009919
DUF1456 Protein of unknown function (DUF1456) PF07308 IPR009921
DUF1458 Protein of unknown function (DUF1458) PF07311 IPR009923
DUF1459 Protein of unknown function (DUF1459) PF07312 IPR009924
DUF1460 Protein of unknown function (DUF1460) PF07313 IPR010846
DUF1461 Protein of unknown function (DUF1461) PF07314 IPR010178
DUF1462 Protein of unknown function (DUF1462) PF07315 IPR009190
DUF1463 Protein of unknown function (DUF1463) PF07316 IPR009925
DUF1464 Protein of unknown function (DUF1464) PF07318 IPR009927
DUF1465 Protein of unknown function (DUF1465) PF07323 IPR010848
DUF1466 Protein of unknown function (DUF1466) PF07326 IPR009932
DUF1467 Protein of unknown function (DUF1467) PF07330 IPR009935
DUF1468 Protein of unknown function (DUF1468) PF07331 IPR009936
DUF1469 Protein of unknown function (DUF1469) PF07332 IPR009937
DUF1470 Protein of unknown function (DUF1470) PF07336 IPR010852
DUF1471 Protein of unknown function (DUF1471) PF07338 IPR010854
DUF1472 Protein of unknown function (DUF1472) PF07339 IPR009940
DUF1473 Protein of unknown function (DUF1473) PF07341 IPR009941
DUF1474 Protein of unknown function (DUF1474) PF07342 IPR009942
DUF1475 Protein of unknown function (DUF1475) PF07343 IPR009943
DUF1476 Protein of unknown function (DUF1476) PF07345 IPR009945
DUF1477 Protein of unknown function (DUF1477) PF07346 IPR009946
DUF1478 Protein of unknown function (DUF1478) PF07349 IPR009949
DUF1479 Protein of unknown function (DUF1479) PF07350 IPR010856
DUF148 Domain of unknown function DUF148 PF02520 IPR003677
DUF1480 Protein of unknown function (DUF1480) PF07351 IPR009950
DUF1481 Protein of unknown function (DUF1481) PF07356 IPR010858
DUF1482 Protein of unknown function (DUF1482) PF07358 IPR009954
DUF1483 Protein of unknown function (DUF1483) PF07360
DUF1484 Protein of unknown function (DUF1484) PF07363 IPR009957
DUF1485 Protein of unknown function (DUF1485) PF07364 IPR015995
DUF1487 Protein of unknown function (DUF1487) PF07368 IPR009961
DUF1488 Protein of unknown function (DUF1488) PF07369 IPR009962
DUF1489 Protein of unknown function (DUF1489) PF07370 IPR008320
DUF149 Uncharacterised BCR, YbaB family COG0718 PF02575 IPR004401
DUF1490 Protein of unknown function (DUF1490) PF07371 IPR009963
DUF1491 Protein of unknown function (DUF1491) PF07372 IPR009964
DUF1492 Protein of unknown function (DUF1492) PF07374 IPR010861
DUF1493 Protein of unknown function (DUF1493) PF07377 IPR010862
DUF1494 Protein of unknown function (DUF1494) PF07379 IPR009968
DUF1495 Winged helix DNA-binding domain (DUF1495) PF07381 IPR010863
DUF1496 Protein of unknown function (DUF1496) PF07383 IPR009971
DUF1497 Protein of unknown function (DUF1497) PF07384 IPR009972
DUF1498 Protein of unknown function (DUF1498) PF07385 IPR010864
DUF1499 Protein of unknown function (DUF1499) PF07386
DUF150 Uncharacterised BCR, YhbC family COG0779 PF02576 IPR003728
DUF1500 Protein of unknown function (DUF1500) PF07389 IPR009974
DUF1501 Protein of unknown function (DUF1501) PF07394 IPR010869
DUF1502 Repeat of unknown function (DUF1502) PF07397 IPR010871
DUF1503 Protein of unknown function (DUF1503) PF07398 IPR010872
DUF1504 Protein of unknown function (DUF1504) PF07399 IPR009978
DUF1505 Protein of unknown function (DUF1505) PF07403 IPR009981
DUF1506 Protein of unknown function (DUF1506) PF07405 IPR010875
DUF1507 Protein of unknown function (DUF1507) PF07408 IPR009983
DUF1508 Domain of unknown function (DUF1508) PF07411 IPR010879
DUF1509 Protein of unknown function (DUF1509) PF07420 IPR010883
DUF151 Uncharacterised ACR, COG1259 PF02577 IPR003729
DUF1510 Protein of unknown function (DUF1510) PF07423 IPR009988
DUF1511 Protein of unknown function (DUF1511) PF07427
DUF1512 Protein of unknown function (DUF1512) PF07431 IPR009995
DUF1513 Protein of unknown function (DUF1513) PF07433 IPR008311
DUF1514 Protein of unknown function (DUF1514) PF07438 IPR009999
DUF1515 Protein of unknown function (DUF1515) PF07439 IPR010889
DUF1516 Protein of unknown function (DUF1516) PF07457 IPR010899
DUF1517 Protein of unknown function (DUF1517) PF07466
DUF1518 Domain of unknown function (DUF1518) PF07469 IPR010011
DUF1519 Protein of unknown function (DUF1519) PF05551 IPR008704
DUF1520 Domain of Unknown Function (DUF1520) PF07480 IPR011085
DUF1521 Domain of Unknown Function (DUF1521) PF07481 IPR011086
DUF1522 Domain of Unknown Function (DUF1522) PF07482 IPR011087
DUF1523 Protein of unknown function (DUF1523) PF07509 IPR011088
DUF1524 Protein of unknown function (DUF1524) PF07510 IPR011089
DUF1525 Protein of unknown function (DUF1525) PF07511 IPR011090
DUF1526 Protein of unknown function (DUF1526) PF07512
DUF1527 Protein of unknown function (DUF1527) PF07513 IPR011092
DUF1528 Protein of unknown function (DUF1528) PF07515 IPR011093
DUF1529 Domain of Unknown Function (DUF1259) PF07485 IPR011094
DUF1532 Protein of unknown function, DUF1532 PF06801
DUF1533 Protein of unknown function (DUF1533) PF07550 IPR011432
DUF1534 Protein of unknown function (DUF1534) PF07551 IPR011433
DUF1535 Domain of Unknown Function (DUF1535) PF07553 IPR011434
DUF1537 Protein of unknown function, DUF1537 PF07005 IPR010737
DUF1538 Protein of unknown function (DUF1538) PF07556 IPR011435
DUF1539 Domain of Unknown Function (DUF1539) PF07560 IPR011436
DUF1540 Domain of Unknown Function (DUF1540) PF07561 IPR011437
DUF1541 Protein of unknown function (DUF1541) PF07563 IPR011438
DUF1542 Domain of Unknown Function (DUF1542) PF07564 IPR011439
DUF1543 Domain of Unknown Function (DUF1543) PF07566 IPR011440
DUF1545 Protein of unknown function (DUF1545) PF07570
DUF1546 Protein of unknown function (DUF1546) PF07571 IPR011442
DUF1547 Domain of Unknown Function (DUF1547) PF07577 IPR011443
DUF1548 Domain of Unknown Function (DUF1548) PF07579 IPR013044
DUF155 Uncharacterised ACR, YagE family COG1723 PF02582 IPR003734
DUF1550 Protein of unknown function (DUF1550) PF07584 IPR011933
DUF1551 Protein of unknown function (DUF1551) PF07585 IPR011446
DUF1554 Protein of unknown function (DUF1554) PF07588 IPR011448
DUF1556 Protein of unknown function (DUF1556) PF07590 IPR011450
DUF1557 Protein of unknown function (DUF1557) PF07591 IPR011451
DUF1558 Protein of unknown function (DUF1558) PF07594
DUF156 Uncharacterised BCR, COG1937 PF02583 IPR003735
DUF1560 Protein of unknown function (DUF1560) PF07597 IPR011454
DUF1561 Protein of unknown function (DUF1561) PF07598 IPR011455
DUF1562 Protein of unknown function (DUF1562) PF07601 IPR011456
DUF1563 Protein of unknown function (DUF1563) PF07599 IPR011457
DUF1564 Protein of unknown function (DUF1564) PF07600 IPR011458
DUF1565 Protein of unknown function (DUF1565) PF07602 IPR011459
DUF1566 Protein of unknown function (DUF1566) PF07603 IPR011460
DUF1567 Protein of unknown function (DUF1567) PF07604 IPR011461
DUF1568 Protein of unknown function (DUF1568) PF07605
DUF1569 Protein of unknown function (DUF1569) PF07606 IPR011463
DUF1570 Protein of unknown function (DUF1570) PF07607 IPR011464
DUF1571 Protein of unknown function (DUF1571) PF07608 IPR011465
DUF1572 Protein of unknown function (DUF1572) PF07609 IPR011466
DUF1573 Protein of unknown function (DUF1573) PF07610 IPR011467
DUF1574 Protein of unknown function (DUF1574) PF07611 IPR011468
DUF1576 Protein of unknown function (DUF1576) PF07613 IPR011470
DUF1577 Protein of unknown function (DUF1577) PF07614 IPR011471
DUF1579 Protein of unknown function (DUF1579) PF07617 IPR011473
DUF1580 Protein of unknown function (DUF1580) PF07618 IPR011474
DUF1581 Protein of unknown function (DUF1581) PF07619 IPR022660
DUF1582 Protein of unknown function (DUF1582) PF07621 IPR011476
DUF1583 Protein of unknown function (DUF1583) PF07622 IPR011475
DUF1586 Protein of unknown function (DUF1586) PF07625 IPR011479
DUF1589 Protein of unknown function (DUF1589) PF07628 IPR011480
DUF159 Uncharacterised ACR, COG2135 PF02586 IPR003738
DUF1590 Protein of unknown function (DUF1590) PF07629 IPR011481
DUF1593 Protein of unknown function (DUF1593) PF07632 IPR011483
DUF1596 Protein of unknown function (DUF1596) PF07641 IPR011485
DUF1597 Protein of unknown function (DUF1597) PF07642 IPR011486
DUF1598 Protein of unknown function (DUF1598) PF07643 IPR011487
DUF1599 Domain of Unknown Function (DUF1599) PF07659 IPR011630
DUF16 Protein of unknown function DUF16 PF01519 IPR002862
DUF1600 Protein of unknown function (DUF1600) PF07667 IPR011631
DUF1601 Protein of unknown function (DUF1601) PF07671 IPR011632
DUF1602 Protein of unknown function (DUF1602) PF07673 IPR011633
DUF1603 Protein of unknown function (DUF1603) PF07674
DUF1604 Protein of unknown function (DUF1604) PF07713 IPR011666
DUF1605 Domain of unknown function (DUF1605) PF07717 IPR011709
DUF1608 Protein of unknown function (DUF1608) PF07752 IPR006457
DUF1609 Protein of unknown function (DUF1609) PF07753 IPR011667
DUF161 Uncharacterized BCR, YitT family COG1284 PF02588 IPR003740
DUF1610 Domain of unknown function (DUF1610) PF07754 IPR011668
DUF1611 Protein of unknown function (DUF1611) PF07755 IPR011669
DUF1612 Protein of unknown function (DUF1612) PF07756 IPR011670
DUF1614 Protein of unknown function (DUF1614) PF07758 IPR011672
DUF1615 Protein of unknown function (DUF1615) PF07759 IPR011673
DUF1616 Protein of unknown function (DUF1616) PF07760 IPR011674
DUF1617 Protein of unknown function (DUF1617) PF07761 IPR011675
DUF1618 Protein of unknown function (DUF1618) PF07762 IPR011676
DUF1619 Protein of unknown function (DUF1619) PF07773 IPR011677
DUF162 Uncharacterised ACR, YkgG family COG1556 PF02589 IPR003741
DUF1620 Protein of unknown function (DUF1620) PF07774 IPR011678
DUF1621 Protein of unknown function (DUF1621) PF07783
DUF1622 Protein of unknown function (DUF1622) PF07784 IPR012427
DUF1623 Protein of unknown function (DUF1623) PF07785 IPR012428
DUF1624 Protein of unknown function (DUF1624) PF07786 IPR012429
DUF1625 Protein of unknown function (DUF1625) PF07787 IPR012430
DUF1626 Protein of unknown function (DUF1626) PF07788 IPR012431
DUF1627 Protein of unknown function (DUF1627) PF07789 IPR012432
DUF1628 Protein of unknown function (DUF1628) PF07790 IPR012859
DUF1629 Protein of unknown function (DUF1629) PF07791 IPR012433
DUF1630 Protein of unknown function (DUF1630) PF07792 IPR012860
DUF1631 Protein of unknown function (DUF1631) PF07793 IPR012434
DUF1632 CEO family (DUF1632) PF07857 IPR012435
DUF1633 Protein of unknown function (DUF1633) PF07794 IPR012436
DUF1634 Protein of unknown function (DUF1634) PF07843 IPR012861
DUF1635 Protein of unknown function (DUF1635) PF07795 IPR012862
DUF1636 Protein of unknown function (DUF1636) PF07845 IPR012863
DUF1637 Protein of unknown function (DUF1637) PF07847 IPR012864
DUF1638 Protein of unknown function (DUF1638) PF07796 IPR012437
DUF1639 Protein of unknown function (DUF1639) PF07797 IPR012438
DUF164 Putative zinc ribbon domain PF02591 IPR003743
DUF1640 Protein of unknown function (DUF1640) PF07798
DUF1641 Protein of unknown function (DUF1641) PF07849 IPR012440
DUF1642 Protein of unknown function (DUF1642) PF07852 IPR012865
DUF1643 Protein of unknown function (DUF1643) PF07799 IPR012441
DUF1644 Protein of unknown function (DUF1644) PF07800 IPR012866
DUF1645 Protein of unknown function (DUF1645) PF07816 IPR012442
DUF1646 Protein of unknown function (DUF1646) PF07854 IPR012443
DUF1647 Protein of unknown function (DUF1647) PF07801 IPR012444
DUF1648 Protein of unknown function (DUF1648) PF07853 IPR012867
DUF1649 Protein of unknown function (DUF1649) PF07855 IPR012445
DUF165 Uncharacterized ACR, YhhQ family COG1738 PF02592 IPR003744
DUF1650 Protein of unknown function (DUF1650) PF07856 IPR012446
DUF1651 Protein of unknown function (DUF1651) PF07864 IPR012447
DUF1652 Protein of unknown function (DUF1652) PF07865 IPR012448
DUF1653 Protein of unknown function (DUF1653) PF07866 IPR012868
DUF1654 Protein of unknown function (DUF1654) PF07867 IPR012449
DUF1655 Protein of unknown function (DUF1655) PF07868 IPR012450
DUF1656 Protein of unknown function (DUF1656) PF07869 IPR012451
DUF1657 Protein of unknown function (DUF1657) PF07870 IPR012452
DUF1658 Protein of unknown function (DUF1658) PF07871 IPR012453
DUF1659 Protein of unknown function (DUF1659) PF07872 IPR012454
DUF166 Uncharacterized ArCR, COG1810 PF02593 IPR003745
DUF1660 Prophage protein (DUF1660) PF07874 IPR012455
DUF1661 Protein of unknown function (DUF1661) PF07877 IPR012456
DUF1662 Protein of unknown function (DUF1662) PF07878 IPR012869
DUF1663 Protein of unknown function (DUF1663) PF07909 IPR012457
DUF1664 Protein of unknown function (DUF1664) PF07889 IPR012458
DUF1666 Protein of unknown function (DUF1666) PF07891 IPR012870
DUF1667 Protein of unknown function (DUF1667) PF07892 IPR012460
DUF1668 Protein of unknown function (DUF1668) PF07893 IPR012871
DUF1669 Protein of unknown function (DUF1669) PF07894 IPR012461
DUF167 Uncharacterised ACR, YggU family COG1872 PF02594 IPR003746
DUF1670 Protein of unknown function (DUF1670) PF07900 IPR012872
DUF1672 Protein of unknown function (DUF1672) PF07901 IPR012873
DUF1673 Protein of unknown function (DUF1673) PF07895 IPR012874
DUF1674 Protein of unknown function (DUF1674) PF07896 IPR012875
DUF1675 Protein of unknown function (DUF1675) PF07897 IPR012463
DUF1676 Protein of unknown function (DUF1676) PF07898 IPR012464
DUF1677 Protein of unknown function (DUF1677) PF07911 IPR012876
DUF1678 Protein of unknown function (DUF1678) PF07913 IPR012465
DUF1679 Protein of unknown function (DUF1679) PF07914 IPR012877
DUF1680 Putative glycosyl hydrolase of unknown function (DUF1680) PF07944 IPR012878
DUF1681 Protein of unknown function (DUF1681) PF07933 IPR012466
DUF1682 Protein of unknown function (DUF1682) PF07946 IPR012879
DUF1683 Protein of unknown function (DUF1683) PF07919 IPR012880
DUF1684 Protein of unknown function (DUF1684) PF07920 IPR012467
DUF1685 Protein of unknown function (DUF1685) PF07939 IPR012881
DUF1686 Protein of unknown function (DUF1686) PF07937 IPR012468
DUF1687 Protein of unknown function (DUF1687) PF07955 IPR012882
DUF1688 Protein of unknown function (DUF1688) PF07958 IPR012469
DUF1689 Protein of unknown function (DUF1689) PF07954 IPR012470
DUF169 Uncharacterised ArCR, COG2043 PF02596 IPR003748
DUF1690 Protein of Unknown function (DUF1690) PF07956 IPR012471
DUF1691 Protein of unknown function (DUF1691) PF07950 IPR012472
DUF1692 Protein of unknown function (DUF1692) PF07970 IPR012936
DUF1693 Domain of unknown function (DUF1693) PF07984 IPR012937
DUF1694 Protein of unknown function (DUF1694) PF07997 IPR012543
DUF1696 Protein of unknown function (DUF1696) PF08000 IPR012544
DUF1697 Protein of unknown function (DUF1697) PF08002 IPR012545
DUF1699 Protein of unknown function (DUF1699) PF08004 IPR012546
DUF1700 Protein of unknown function (DUF1700) PF08006 IPR012963
DUF1702 Protein of unknown function (DUF1702) PF08012 IPR012964
DUF1703 Protein of unknown function (DUF1703) PF08011 IPR012547
DUF1704 Domain of unknown function (DUF1704) PF08014 IPR012548
DUF1705 Domain of unknown function (DUF1705) PF08019 IPR012549
DUF1706 Protein of unknown function (DUF1706) PF08020 IPR012550
DUF1707 Domain of unknown function (DUF1707) PF08044 IPR012551
DUF1708 Domain of unknown function (DUF1708) PF08101 IPR012965
DUF1709 Fungal domain of unknown function (DUF1709) PF08174 IPR012966
DUF171 Uncharacterized ACR, COG2106 PF02598 IPR003750
DUF1711 Fungal protein of unknown function (DUF1711) PF08193 IPR013175
DUF1712 Fungal domain of unknown function (DUF1712) PF08217 IPR013176
DUF1713 Mitochondrial domain of unknown function (DUF1713) PF08213 IPR013177
DUF1715 Eukaryotic domain of unknown function (DUF1715) PF08215
DUF1716 Eukaryotic domain of unknown function (DUF1716) PF08216 IPR013180
DUF1717 Viral domain of unknown function (DUF1717) PF05414 IPR008745
DUF1719 Domain of unknown function (DUF1719) PF08224 IPR013181
DUF1720 Domain of unknown function (DUF1720) PF08226 IPR013182
DUF1722 Protein of unknown function (DUF1722) PF08349 IPR013560
DUF1724 Domain of unknown function (DUF1724) PF08350 IPR013561
DUF1725 Protein of unknown function (DUF1725) PF08333 IPR013544
DUF1726 Domain of unknown function (DUF1726) PF08351 IPR013562
DUF1727 Domain of unknown function (DUF1727) PF08353 IPR013564
DUF1729 Domain of unknown function (DUF1729) PF08354 IPR013565
DUF1730 Domain of unknown function (DUF1730) PF08331 IPR013542
DUF1731 Domain of unknown function (DUF1731) PF08338 IPR013549
DUF1732 Domain of unknown function (DUF1732) PF08340 IPR013551
DUF1735 Domain of unknown function (DUF1735) PF08522 IPR013728
DUF1736 Domain of unknown function (DUF1736) PF08409 IPR013618
DUF1737 Domain of unknown function (DUF1737) PF08410 IPR013619
DUF1738 Domain of unknown function (DUF1738) PF08401 IPR013610
DUF1740 Protein of unknown function (DUF1740) PF08424 IPR013633
DUF1741 Domain of unknown function (DUF1741) PF08427 IPR013636
DUF1742 Fungal protein of unknown function (DUF1742) PF08432 IPR013640
DUF1743 Domain of unknown function (DUF1743) PF08489 IPR013696
DUF1744 Domain of unknown function (DUF1744) PF08490 IPR013697
DUF1746 Fungal domain of unknown function (DUF1746) PF08508 IPR013715
DUF1748 Fungal protein of unknown function (DUF1748) PF08520 IPR013726
DUF1749 Protein of unknown function (DUF1749) PF08538 IPR013744
DUF1750 Fungal domain of unknown function (DUF1750) PF08549 IPR013859
DUF1751 Eukaryotic integral membrane protein (DUF1751) PF08551 IPR013861
DUF1752 Fungal protein of unknown function (DUF1752) PF08550 IPR013860
DUF1753 Golgi protein of unknown function (DUF1753) PF08552 IPR013862
DUF1754 Eukaryotic family of unknown function (DUF1754) PF08555 IPR013865
DUF1757 Protein of unknown function (DUF1757) PF08560 IPR013869
DUF1758 Protein of unknown function (DUF1758) PF05585 IPR008737
DUF1759 Protein of unknown function (DUF1759) PF03564 IPR005312
DUF1760 Fungal protein of unknown function (DUF1760) PF08568 IPR013877
DUF1761 Protein of unknown function (DUF1761) PF08570 IPR013879
DUF1762 Protein of unknown function (DUF1762) PF08574 IPR013883
DUF1763 Domain of unknown function (DUF1763) PF08575 IPR013884
DUF1764 Eukaryotic protein of unknown function (DUF1764) PF08576 IPR013885
DUF1765 Protein of unknown function (DUF1765) PF08578 IPR013887
DUF1767 Domain of unknown function (DUF1767) PF08585 IPR013894
DUF1768 Domain of unknown function (DUF1768) PF08719 IPR012816
DUF1769 Protein of unknown function (DUF1769) PF08588 IPR013897
DUF177 Uncharacterized ACR, COG1399 PF02620 IPR003772
DUF1770 Fungal protein of unknown function (DUF1770) PF08589 IPR013898
DUF1771 Domain of unknown function (DUF1771) PF08590 IPR013899
DUF1772 Domain of unknown function (DUF1772) PF08592 IPR013901
DUF1773 Protein of unknown function DUF1773 PF08593 IPR013902
DUF1774 Fungal protein of unknown function (DUF1774) PF08611 IPR013920
DUF1775 Domain of unkown function (DUF1775) PF07987 IPR012533
DUF1776 Fungal family of unknown function (DUF1776) PF08643 IPR013952
DUF1777 Protein of unknown function (DUF1777) PF08648 IPR013957
DUF1778 Protein of unknown function (DUF1778) PF08681 IPR014795
DUF1779 Protein of unknown function (DUF1779) PF08680 IPR014794
DUF178 Uncharacterized ACR, COG1427 PF02621 IPR003773
DUF1780 Protein of unknown function (DUF1780) PF08682 IPR014796
DUF1781 Protein of unknown function (DUF1781) PF08683 IPR014797
DUF1783 Fungal protein of unknown function (DUF1783) PF08695
DUF1785 Domain of unknown function (DUF1785) PF08699 IPR014811
DUF1786 Putative pyruvate format-lyase activating enzyme (DUF1786) PF08735 IPR014846
DUF1788 Domain of unknown function (DUF1788) PF08747 IPR014858
DUF1789 Domain of unknown function (DUF1789) PF08748 IPR014859
DUF179 Uncharacterized ACR, COG1678 PF02622 IPR003774
DUF1790 Family of unknown function (DUF1790) PF08749 IPR014860
DUF1791 Domain of unknown function (DUF1791) PF08754
DUF1792 Domain of unknown function (DUF1792) PF08759 IPR014869
DUF1793 Domain of unknown function (DUF1793) PF08760 IPR014870
DUF1794 Domain of unknown function (DUF1794) PF08768 IPR014878
DUF1795 Domain of unknown function (DUF1795) PF08786 IPR014894
DUF1796 Putative papain-like cysteine peptidase (DUF1796) PF08795 IPR014903
DUF1797 Protein of unknown function (DUF1797) PF08796 IPR014904
DUF1798 Bacterial domain of unknown function (DUF1798) PF08807 IPR014913
DUF1799 Phage related hypothetical protein (DUF1799) PF08809 IPR014915
DUF1800 Protein of unknown function (DUF1800) PF08811 IPR014917
DUF1801 Domain of unknown function (DU1801) PF08818 IPR014922
DUF1802 Domain of unknown function (DUF1802) PF08819 IPR014923
DUF1803 Domain of unknown function (DUF1803) PF08820 IPR014924
DUF1804 Protein of unknown function (DUF1804) PF08822 IPR014926
DUF1805 Domain of unknown function (DUF1805) PF08827 IPR014931
DUF1806 Protein of unknown function (DUF1806) PF08830 IPR014934
DUF1810 Protein of unknown function (DUF1810) PF08837 IPR014937
DUF1811 Protein of unknown function (DUF1811) PF08838 IPR014938
DUF1812 Protein of unknown function (DUF1812) PF08842 IPR014941
DUF1813 HSP20-like domain of unknown function (DUF1813) PF08845 IPR014944
DUF1814 Domain of unknown function (DUF1814) PF08843 IPR014942
DUF1815 Domain of unknown function (DUF1815) PF08844 IPR014943
DUF1816 Domain of unknown function (DUF1816) PF08846 IPR014945
DUF1817 Domain of unknown function (DUF1817) PF08847 IPR014946
DUF1818 Domain of unknown function (DUF1818) PF08848 IPR014947
DUF1819 Putative inner membrane protein (DUF1819) PF08849 IPR014948
DUF1820 Domain of unknown function (DUF1820) PF08850 IPR014949
DUF1821 Domain of unknown function (DUF1821) PF08851 IPR014950
DUF1822 Protein of unknown function (DUF1822) PF08852 IPR014951
DUF1823 Domain of unknown function (DUF1823) PF08853 IPR014952
DUF1824 Domain of unknown function (DUF1824) PF08854 IPR014953
DUF1825 Domain of unknown function (DUF1825) PF08855 IPR014954
DUF1826 Protein of unknown function (DUF1826) PF08856 IPR014955
DUF1827 Domain of unknown function (DUF1827) PF08860 IPR014959
DUF1828 Domain of unknown function DUF1828 PF08861 IPR014960
DUF1829 Domain of unknown function DUF1829 PF08862 IPR014961
DUF1830 Domain of unknown function (DUF1830) PF08865 IPR014964
DUF1831 Domain of unknown function (DUF1831) PF08866 IPR014965
DUF1832 Domain of unknown function (DUF1832) PF08870 IPR014969
DUF1833 Domain of unknown function (DUF1833) PF08875 IPR014974
DUF1834 Domain of unknown function (DUF1834) PF08873 IPR014972
DUF1835 Domain of unknown function (DUF1835) PF08874 IPR014973
DUF1836 Domain of unknown function (DUF1836) PF08876 IPR014975
DUF1837 Domain of unknown function (DUF1837) PF08878 IPR014976
DUF1838 Protein of unknown function (DUF1838) PF08894 IPR014990
DUF1839 Domain of unknown function (DUF1839) PF08893 IPR014989
DUF1840 Domain of unknown function (DUF1840) PF08895 IPR014991
DUF1841 Domain of unknown function (DUF1841) PF08897 IPR014993
DUF1842 Domain of unknown function (DUF1842) PF08896 IPR014992
DUF1843 Domain of unknown function (DUF1843) PF08898 IPR014994
DUF1844 Domain of unknown function (DUF1844) PF08899 IPR014995
DUF1845 Domain of unknown function (DUF1845) PF08900 IPR014996
DUF1846 Domain of unknown function (DUF1846) PF08903 IPR014999
DUF1847 Protein of unknown function (DUF1847) PF08901 IPR014997
DUF1848 Domain of unknown function (DUF1848) PF08902 IPR014998
DUF1849 Domain of unknown function (DUF1849) PF08904 IPR015000
DUF185 Uncharacterized ACR, COG1565 PF02636 IPR003788
DUF1850 Domain of unknown function (DUF1850) PF08905 IPR015001
DUF1851 Domain of unknown function (DUF1851) PF08906 IPR015002
DUF1852 Domain of unknown function (DUF1852) PF08908 IPR015004
DUF1853 Domain of unknown function (DUF1853) PF08907 IPR015003
DUF1854 Domain of unknown function (DUF1854) PF08909 IPR015005
DUF1855 Protein of unknown function (DUF1855) PF08910 IPR015006
DUF1856 Domain of unknown function (DUF1856) PF08983 IPR015076
DUF1857 Domain of unknown function (DUF1857) PF08982 IPR015075
DUF1858 Domain of unknown function (DUF1858) PF08984 IPR015077
DUF1859 Domain of unknown function (DUF1859) PF08948 IPR015043
DUF1860 Domain of unknown function (DUF1860) PF08949 IPR015044
DUF1861 Protein of unknown function (DUF1861) PF08950 IPR015045
DUF1863 MTH538 TIR-like domain (DUF1863) PF08937 IPR015032
DUF1864 Domain of unknown function (DUF1864) PF08933 IPR015029
DUF1865 Domain of unknown function (DUF1865) PF08935 IPR015031
DUF1866 Domain of unknown function (DUF1866) PF08952 IPR015047
DUF1867 Domain of unknown function (DUF1867) PF08981
DUF1869 Domain of unknown function (DUF1869) PF08956 IPR015051
DUF187 Uncharacterised BCR, COG1649 PF02638 IPR003790
DUF1870 Domain of unknown function (DUF1870) PF08965 IPR015060
DUF1871 Domain of unknown function (DUF1871) PF08958 IPR015053
DUF1872 Domain of unknown function (DUF1872) PF08959 IPR015054
DUF1873 Domain of unknown function (DUF1873) PF08969 IPR015063
DUF1874 Domain of unknown function (DUF1874) PF08960 IPR015055
DUF1875 Domain of unknown function (DUF1875) PF08961 IPR015056
DUF1876 Domain of unknown function (DUF1876) PF08962 IPR015057
DUF1877 Domain of unknown function (DUF1877) PF08974 IPR015068
DUF1878 Protein of unknown function (DUF1878) PF08963 IPR015058
DUF1879 Domain of unknown function (DUF1879) PF09170 IPR015253
DUF188 Uncharacterized BCR, YaiI/YqxD family COG1671 PF02639 IPR003791
DUF1880 Domain of unknown function (DUF1880) PF08976 IPR015070
DUF1881 Protein of unkown function (DUF1881) PF08964 IPR015059
DUF1882 Domain of unknown function (DUF1882) PF08966 IPR015061
DUF1883 Domain of unknown function (DUF1883) PF08980 IPR015073
DUF1884 Domain of unknown function (DUF1884) PF08967 IPR014418
DUF1885 Domain of unknown function (DUF1885) PF08968 IPR015062
DUF1886 Domain of unknown function (DUF1886) PF09171 IPR015254
DUF1887 Domain of unknown function (DUF1887) PF09002 IPR015093
DUF1888 Domain of unknown function (DUF1888) PF08985 IPR015078
DUF1889 Domain of unknown function (DUF1889) PF08986 IPR015079
DUF1890 Domain of unknown function (DUF1890) PF09001 IPR012033
DUF1891 Domain of unknown function (DUF1891) PF09004 IPR015095
DUF1892 Protein of unknown function (DUF1892) PF08987 IPR015080
DUF1893 Domain of unknown function (DUF1893) PF08973 IPR015067
DUF1894 Domain of unknown function (DUF1894) PF08979 IPR012031
DUF1895 Protein of unknown function (DUF1895) PF08988 IPR015081
DUF1896 Domain of unknown function (DUF1896) PF08989 IPR015082
DUF1897 Domain of unknown function (DUF1897) PF09005 IPR015096
DUF1898 Domain of unknown function (DUF1898) PF09011 IPR015101
DUF1899 Domain of unknown function (DUF1899) PF08953 IPR015048
DUF19 Domain of unknown function DUF19 PF01579 IPR002542
DUF190 Uncharacterized ACR, COG1993 PF02641 IPR003793
DUF1900 Domain of unknown function (DUF1900) PF08954 IPR015049
DUF1901 Domain of unkown function (DUF1901) PF08955 IPR015050
DUF1902 Domain of unknown function (DUF1902) PF08972 IPR015066
DUF1903 Domain of unknown function (DUF1903) PF08991 IPR009069
DUF1904 Domain of unknown function (DUF1904) PF08921 IPR015017
DUF1905 Domain of unknown function (DUF1905) PF08922 IPR015018
DUF1906 Domain of unknown function (DUF1906) PF08924 IPR015020
DUF1907 Domain of Unknown Function (DUF1907) PF08925 IPR015021
DUF1908 Domain of unknown function (DUF1908) PF08926 IPR015022
DUF1909 Domain of unknown function (DUF1909) PF08927
DUF191 Uncharacterized ACR, COG2107 PF02642
DUF1910 Domain of unknown function (DUF1910) PF08928 IPR015024
DUF1911 Domain of unknown function (DUF1911) PF08929 IPR015025
DUF1912 Domain of unknown function (DUF1912) PF08930 IPR015026
DUF1913 Domain of unknown function (DUF1913) PF08931 IPR015027
DUF1914 Domain of unknown function (DUF1914) PF08932 IPR015028
DUF1916 Domain of unknown function (DUF1916) PF08938 IPR015033
DUF1917 Domain of unknown function (DUF1917) PF08939 IPR015034
DUF1918 Domain of unknown function (DUF1918) PF08940 IPR015035
DUF1919 Domain of unknown function (DUF1919) PF08942 IPR015037
DUF192 Uncharacterized ACR, COG1430 PF02643 IPR003795
DUF1921 Domain of unknown function (DUF1921) PF09081 IPR015165
DUF1922 Domain of unknown function (DUF1922) PF09082 IPR015166
DUF1923 Domain of unknown function (DUF1923) PF09083 IPR015167
DUF1924 Domain of unknown function (DUF1924) PF09086 IPR015170
DUF1925 Domain of unknown function (DUF1925) PF09094 IPR015178
DUF1926 Domain of unknown function (DUF1926) PF09095 IPR015179
DUF1927 Domain of unknown function (DUF1927) PF09099 IPR015183
DUF1928 Domain of unknown function (DUF1928) PF09100 IPR015184
DUF1929 Domain of unknown function (DUF1929) PF09118 IPR015202
DUF1930 Domain of unknown function (DUF1930) PF09122 IPR015206
DUF1931 Domain of unknown function (DUF1931) PF09123 IPR015207
DUF1932 Domain of unknown function (DUF1932) PF09130 IPR015814
DUF1933 Domain of unknown function (DUF1933) PF09147 IPR015230
DUF1934 Domain of unknown function (DUF1934) PF09148 IPR015231
DUF1935 Domain of unknown function (DUF1935) PF09149 IPR015232
DUF1936 Domain of unknown function (DUF1936) PF09151 IPR015234
DUF1937 Domain of unknown function (DUF1937) PF09152 IPR015235
DUF1938 Domain of unknown function (DUF1938) PF09153 IPR015236
DUF1939 Domain of unknown function (DUF1939) PF09154 IPR015237
DUF1940 Domain of unknown function (DUF1940) PF09155 IPR015238
DUF1941 Protein of unknown function (DUF1941) PF09161
DUF1942 Domain of unknown function (DUF1942) PF09167 IPR015250
DUF1943 Domain of unknown function (DUF1943) PF09172 IPR015255
DUF1944 Domain of unknown function (DUF1944) PF09175 IPR015258
DUF1945 Domain of unknown function (DUF1945) PF09178 IPR015261
DUF1946 Domain of unkown function (DUF1946) PF09179 IPR015262
DUF1947 Domain of unknown function (DUF1947) PF09183 IPR015266
DUF1948 Domain of unknown function (DUF1948) PF09185 IPR015268
DUF1949 Domain of unknown function (DUF1949) PF09186 IPR015269
DUF1950 Domain of unknown function(DUF1950) PF09187 IPR015270
DUF1951 Domain of unknown function (DUF1951) PF09188 IPR015271
DUF1952 Domain of unknown function (DUF1952) PF09189 IPR015272
DUF1953 Domain of unknown function (DUF1953) PF09196 IPR015279
DUF1954 Domain of unknown function (DUF1954) PF09199 IPR015282
DUF1955 Domain of unknown function (DUF1955) PF09205 IPR015288
DUF1956 Domain of unknown function (DUF1956) PF09209 IPR015292
DUF1957 Domain of unknown function (DUF1957) PF09210 IPR015293
DUF1958 Domain of unknown function (DUF1958) PF09211 IPR015294
DUF1959 Domain of unknown function (DUF1959) PF09218 IPR012056
DUF196 Uncharacterized ACR, COG1343 PF02647
DUF1961 Domain of unknown function (DUF1961) PF09224 IPR015305
DUF1962 Domain of unknown function (DUF1962) PF09227 IPR015308
DUF1963 Domain of unknown function (DUF1963) PF09234 IPR015315
DUF1964 Domain of unknown function (DUF1964) PF09244 IPR015325
DUF1965 Domain of unknown function (DUF1965) PF09248 IPR015328
DUF1966 Domain of unknown function (DUF1966) PF09260 IPR015340
DUF1967 Domain of unknown function (DUF1967) PF09269 IPR015349
DUF1968 Domain of unknown function (DUF1968) PF09291 IPR015370
DUF1969 Domain of unknown function (DUF1969) PF09298 IPR015377
DUF1970 Domain of unknown function (DUF1970) PF09301 IPR015380
DUF1971 Domain of unknown function (DUF1971) PF09313 IPR015392
DUF1972 Domain of unknown function (DUF1972) PF09314 IPR015393
DUF1973 Domain of unknown function (DUF1973) PF09315 IPR015394
DUF1974 Domain of unknown function (DUF1974) PF09317 IPR015396
DUF1975 Domain of unknown function (DUF1975) PF09318 IPR015397
DUF1976 Domain of unknown function (DUF1976) PF09319 IPR015398
DUF1977 Domain of unknown function (DUF1977) PF09320 IPR015399
DUF1978 Domain of unknown function (DUF1978) PF09321 IPR015400
DUF1979 Domain of unknown function (DUF1979) PF09322 IPR015401
DUF198 Uncharacterized ACR, COG1469 PF02649 IPR003801
DUF1980 Domain of unknown function (DUF1980) PF09323 IPR015402
DUF1981 Domain of unknown function (DUF1981) PF09324 IPR015403
DUF1982 Domain of unknown function (DUF1982) PF09326 IPR015405
DUF1983 Domain of unknown function (DUF1983) PF09327 IPR015406
DUF1985 Domain of unknown function (DUF1985) PF09331 IPR015410
DUF1986 Domain of unknown function (DUF1986) PF09342 IPR015420
DUF1987 Domain of unknown function (DUF1987) PF09345 IPR018530
DUF1989 Domain of unknown function (DUF1989) PF09347 IPR018959
DUF1990 Domain of unknown function (DUF1990) PF09348 IPR018960
DUF1992 Domain of unknown function (DUF1992) PF09350 IPR018961
DUF1993 Domain of unknown function (DUF1993) PF09351 IPR018531
DUF1994 Domain of unknown function (DUF1994) PF09352 IPR018532
DUF1995 Domain of unknown function (DUF1995) PF09353 IPR018962
DUF1996 Domain of unknown function (DUF1996) PF09362 IPR018535
DUF1997 Protein of unknown function (DUF1997) PF09366 IPR018971
DUF1998 Domain of unknown function (DUF1998) PF09369 IPR018973
DUF1999 Protein of unknown function (DUF1999) PF09390 IPR018987
DUF2000 Protein of unknown function (DUF2000) PF09391 IPR018988
DUF2001 Protein of unknown function (DUF2001) PF09393 IPR018989
DUF2002 Protein of unknown function (DUF2002) PF09400 IPR018994
DUF2003 Eukaryotic protein of unknown function (DUF2003) PF09404 IPR018544
DUF2004 Protein of unknown function (DUF2004) PF09406 IPR018546
DUF2005 Protein of unknown function (DUF2005) PF09407 IPR018547
DUF2006 Proteins of unknown function (DUF2006) PF09410
DUF2007 Protein of unknown function (DUF2007) PF09413 IPR018551
DUF2008 Protein of unknown function (DUF2008) PF09415 IPR018552
DUF2009 Protein of unknown function (DUF2009) PF09418 IPR018553
DUF2010 Protein of unknown function PF09419 IPR019001
DUF2011 Fungal protein of unknown function (DUF2011) PF09428 IPR018555
DUF2012 Protein of unknown function (DUF2012) PF09430 IPR019008
DUF2013 Protein of unknown function (DUF2013) PF09431 IPR018556
DUF2014 Domain of unknown function (DUF2014) PF09427 IPR019006
DUF2015 Fungal protein of unknown function (DUF2015) PF09435 IPR018559
DUF2016 Domain of unknown function (DUF2016) PF09436 IPR018560
DUF2017 Domain of unknown function (DUF2017) PF09438 IPR018561
DUF2018 Domain of unknown function (DUF2018) PF09442 IPR018563
DUF2019 Domain of unknown function (DUF2019) PF09450 IPR018568
DUF202 Domain of unknown function DUF PF02656 IPR003807
DUF2020 Domain of unknown function (DUF2020) PF09449 IPR018567
DUF2021 Domain of unknown function (DUF2021) PF09464
DUF2023 Protein of unknown function (DUF2023) PF09633 IPR018594
DUF2024 Domain of unknown function (DUF2024) PF09630 IPR018592
DUF2025 Protein of unknown function (DUF2025) PF09634 IPR018595
DUF2026 Protein of unknown function (DUF2026) PF09641 IPR018599
DUF2027 Domain of unknown function (DUF2027) PF09640 IPR018598
DUF2028 Domain of unknown function (DUF2028) PF09667 IPR019102
DUF2029 Protein of unknown function (DUF2029) PF09594 IPR018584
DUF2031 Protein of unknown function (DUF2031) PF09592 IPR006484
DUF2034 Protein of unknown function (DUF2034) PF10356 IPR018828
DUF2036 Uncharacterized conserved protein (DUF2036) PF09724 IPR019128
DUF2039 Uncharacterized conserved protein (DUF2039) PF10217 IPR019351
DUF204 Domain of unknown function DUF PF02659 IPR003810
DUF2040 Coiled-coil domain-containing protein 55 (DUF2040) PF09745 IPR018612
DUF2042 Uncharacterized conserved protein (DUF2042) PF09743 IPR018611
DUF2043 Uncharacterized conserved protein (DUF2043) PF09740 IPR018610
DUF2044 Conserved membrane protein (DUF2044) PF09739 IPR019140
DUF2045 Uncharacterized conserved protein (DUF2045) PF09741 IPR019141
DUF2046 Uncharacterized conserved protein H4 (DUF2046) PF09755 IPR019152
DUF2048 Uncharacterized conserved protein (DUF2048) PF09752 IPR019149
DUF2049 Protein of unknown function (DUF2049) PF09761
DUF205 Domain of unknown function DUF PF02660 IPR003811
DUF2050 Putative pre-mRNA-splicing factor (DUF2039) PF09736 IPR018609
DUF2051 Double stranded RNA binding protein (DUF2051) PF09738 IPR019139
DUF2052 Coiled-coil domain containing protein (DUF2052) PF09747 IPR018613
DUF2053 Predicted membrane protein (DUF2053) PF09767 IPR019164
DUF2054 Uncharacterized conserved protein (DUF2054) PF10218 IPR019352
DUF2055 Predicted membrane protein (DUF2055) PF10219
DUF2057 Uncharacterized protein conserved in bacteria (DUF2057) PF09829 IPR018635
DUF2058 Uncharacterized protein conserved in bacteria (DUF2058) PF09831 IPR018636
DUF2059 Uncharacterized protein conserved in bacteria (DUF2059) PF09832 IPR018637
DUF2061 Predicted membrane protein (DUF2061) PF09834 IPR018638
DUF2062 Uncharacterized protein conserved in bacteria (DUF2062) PF09835 IPR018639
DUF2063 Uncharacterized protein conserved in bacteria (DUF2063) PF09836 IPR018640
DUF2064 Uncharacterized protein conserved in bacteria (DUF2064) PF09837 IPR018641
DUF2065 Uncharacterized protein conserved in bacteria (DUF2065) PF09838 IPR019201
DUF2066 Uncharacterized protein conserved in bacteria (DUF2066) PF09839 IPR018642
DUF2067 Uncharacterized protein conserved in archaea (DUF2067) PF09840 IPR019202
DUF2068 Predicted membrane protein (DUF2068) PF09841
DUF2069 Predicted membrane protein (DUF2069) PF09842 IPR018643
DUF2070 Predicted membrane protein (DUF2070) PF09843 IPR019204
DUF2071 Uncharacterized conserved protein (COG2071) PF09844 IPR018644
DUF2072 Zn-ribbon containing protein (DUF2072) PF09845 IPR018645
DUF2073 Uncharacterized protein conserved in archaea (DUF2073) PF09846 IPR012017
DUF2074 Predicted permease (DUF2074) PF09847
DUF2075 Uncharacterized conserved protein (DUF2075) PF09848 IPR018647
DUF2076 Uncharacterized protein conserved in bacteria (DUF2076) PF09849 IPR018648
DUF2077 Uncharacterized protein conserved in bacteria (DUF2077) PF09850 IPR017732
DUF2078 Predicted membrane protein (DUF2078) PF09851 IPR018649
DUF2079 Predicted membrane protein (DUF2079) PF09852 IPR018650
DUF208 Uncharacterized BCR, COG1636 PF02677 IPR003828
DUF2080 Putative transposon-encoded protein (DUF2080) PF09853 IPR019205
DUF2081 Uncharacterized conserved protein (DUF2081) PF09854 IPR018651
DUF2082 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) PF09855 IPR018652
DUF2083 Predicted transcriptional regulator (DUF2083) PF09856 IPR018653
DUF2084 Uncharacterized protein conserved in bacteria (DUF2084) PF09857 IPR018654
DUF2085 Predicted membrane protein (DUF2085) PF09858 IPR019206
DUF2086 Uncharacterized protein conserved in bacteria (DUF2086) PF09859 IPR018655
DUF2087 Uncharacterized protein conserved in bacteria (DUF2087) PF09860 IPR018656
DUF2088 Uncharacterized conserved protein (DUF2088) PF09861 IPR018657
DUF2089 Uncharacterized protein conserved in bacteria (DUF2089) PF09862 IPR018658
DUF2090 Uncharacterized protein conserved in bacteria (DUF2090) PF09863 IPR018659
DUF2091 Predicted periplasmic protein (DUF2091) PF09864 IPR018660
DUF2092 Predicted periplasmic protein (DUF2092) PF09865 IPR019207
DUF2093 Uncharacterized protein conserved in bacteria (DUF2093) PF09866 IPR018661
DUF2094 Uncharacterized protein conserved in bacteria (DUF2094) PF09867 IPR017748
DUF2095 Uncharacterized protein conserved in archaea (DUF2095) PF09868 IPR018662
DUF2096 Uncharacterized protein conserved in archaea (DUF2096) PF09869 IPR017098
DUF2097 Uncharacterized protein conserved in archaea (DUF2097) PF09870 IPR019208
DUF2098 Uncharacterized protein conserved in archaea (DUF2098) PF09871 IPR019209
DUF2099 Uncharacterized protein conserved in archaea (DUF2099) PF09872 IPR009181
DUF21 Domain of unknown function DUF21 PF01595 IPR002550
DUF2100 Uncharacterized protein conserved in archaea (DUF2100) PF09873 IPR019210
DUF2101 Predicted membrane protein (DUF2101) PF09874 IPR018663
DUF2102 Uncharacterized protein conserved in archaea (DUF2102) PF09875 IPR012025
DUF2103 Predicted metal-binding protein (DUF2103) PF09876 IPR018664
DUF2104 Predicted membrane protein (DUF2104) PF09877 IPR019211
DUF2105 Predicted membrane protein (DUF2105) PF09878 IPR019212
DUF2106 Predicted membrane protein (DUF2106) PF09879 IPR011313
DUF2107 Predicted membrane protein (DUF2107) PF09880 IPR011317
DUF2108 Predicted membrane protein (DUF2108) PF09881 IPR019213
DUF2109 Predicted membrane protein (DUF2109) PF09882 IPR019214
DUF211 Uncharacterized ArCR, COG1888 PF02680 IPR003831
DUF2110 Uncharacterized protein conserved in archaea (DUF2110) PF09883 IPR016757
DUF2111 Uncharacterized protein conserved in archaea (DUF2111) PF09884 IPR012029
DUF2112 Uncharacterized protein conserved in archaea (DUF2112) PF09885 IPR012356
DUF2113 Uncharacterized protein conserved in archaea (DUF2113) PF09886 IPR016762
DUF2114 Uncharacterized protein conserved in archaea (DUF2114) PF09887 IPR008303
DUF2115 Uncharacterized protein conserved in archaea (DUF2115) PF09888 IPR019215
DUF2116 Uncharacterized protein containing a Zn-ribbon (DUF2116) PF09889
DUF2117 Uncharacterized protein conserved in archaea (DUF2117) PF09890 IPR012032
DUF2118 Uncharacterized protein conserved in archaea (DUF2118) PF09891 IPR019217
DUF2119 Uncharacterized protein conserved in archaea (DUF2119) PF09892 IPR019218
DUF212 Divergent PAP2 family PF02681 IPR003832
DUF2120 Uncharacterized protein conserved in archaea (DUF2120) PF09893 IPR014515
DUF2121 Uncharacterized protein conserved in archaea (DUF2121) PF09894 IPR016754
DUF2122 RecB-family nuclease (DUF2122) PF09895 IPR018665
DUF2124 Uncharacterized protein conserved in archaea (DUF2124) PF09897 IPR009183
DUF2125 Uncharacterized protein conserved in bacteria (DUF2125) PF09898 IPR018666
DUF2126 Uncharacterized protein conserved in bacteria (DUF2126) PF09899 IPR018667
DUF2127 Predicted membrane protein (DUF2127) PF09900 IPR021125
DUF2128 Uncharacterized protein conserved in bacteria (DUF2128) PF09901 IPR017154
DUF2129 Uncharacterized protein conserved in bacteria (DUF2129) PF09902 IPR016979
DUF2130 Uncharacterized protein conserved in bacteria (DUF2130) PF09903 IPR019219
DUF2131 Uncharacterized protein conserved in bacteria (DUF2131) PF09904 IPR017162
DUF2132 Uncharacterized conserved protein (DUF2132) PF09905 IPR018668
DUF2133 Uncharacterized protein conserved in bacteria (DUF2133) PF09976 IPR018704
DUF2134 Predicted membrane protein (DUF2134) PF09977 IPR018705
DUF2135 Uncharacterized protein conserved in bacteria (DUF2135) PF09906 IPR019220
DUF2136 Uncharacterized protein conserved in bacteria (DUF2136) PF09907 IPR018669
DUF2137 Uncharacterized protein conserved in bacteria (DUF2137) PF09908
DUF2138 Uncharacterized protein conserved in bacteria (DUF2138) PF09909 IPR018671
DUF2139 Uncharacterized protein conserved in archaea (DUF2139) PF09910
DUF2140 Uncharacterized protein conserved in bacteria (DUF2140) PF09911 IPR018672
DUF2141 Uncharacterized protein conserved in bacteria (DUF2141) PF09912 IPR018673
DUF2142 Predicted membrane protein (DUF2142) PF09913 IPR018674
DUF2143 Uncharacterized protein conserved in archaea (DUF2143) PF09914
DUF2144 Uncharacterized protein conserved in archaea (DUF2144) PF09915
DUF2145 Uncharacterized protein conserved in bacteria (DUF2145) PF09916 IPR014547
DUF2146 Uncharacterized conserved protein (DUF2146) PF10220 IPR019354
DUF2147 Uncharacterized protein conserved in bacteria (DUF2147) PF09917 IPR019223
DUF2148 Uncharacterized protein containing a ferredoxin domain (DUF2148) PF09918 IPR019224
DUF2149 Uncharacterized conserved protein (DUF2149) PF09919 IPR018676
DUF2150 Uncharacterized protein conserved in archaea (DUF2150) PF09920 IPR014518
DUF2151 Uncharacterized conserved protein (DUF2151) PF10221 IPR019355
DUF2152 Uncharacterized conserved protein (DUF2152) PF10222 IPR018795
DUF2153 Uncharacterized protein conserved in archaea (DUF2153) PF09921 IPR014450
DUF2154 Predicted membrane protein (DUF2154) PF09922
DUF2155 Uncharacterized protein conserved in bacteria (DUF2155) PF09923 IPR019225
DUF2156 Uncharacterized conserved protein (DUF2156) PF09924
DUF2157 Predicted membrane protein (DUF2157) PF09925 IPR018677
DUF2158 Uncharacterized small protein (DUF2158) PF09926 IPR019226
DUF2159 Predicted secreted (periplasmic) protein (DUF2159) PF09927 IPR019227
DUF2160 Predicted small integral membrane protein (DUF2160) PF09928 IPR018678
DUF2161 Uncharacterized conserved protein (DUF2161) PF09929 IPR018679
DUF2162 Predicted transporter (DUF2162) PF09930 IPR017199
DUF2163 Uncharacterized conserved protein (DUF2163) PF09931 IPR019228
DUF2164 Uncharacterized conserved protein (DUF2164) PF09932 IPR018680
DUF2165 Predicted small integral membrane protein (DUF2165) PF09933 IPR018681
DUF2166 Uncharacterized protein conserved in bacteria (DUF2166) PF09934
DUF2167 Uncharacterized membrane-anchored protein conserved in bacteria (DUF2167) PF09935 IPR018682
DUF2168 Uncharacterized protein conserved in bacteria (DUF2168) PF09936 IPR019230
DUF2169 Uncharacterized protein conserved in bacteria (DUF2169) PF09937 IPR018683
DUF217 Uncharacterized ACR, COG1753 PF02697
DUF2170 Uncharacterized protein conserved in bacteria (DUF2170) PF09938 IPR019231
DUF2171 Uncharacterized protein conserved in bacteria (DUF2171) PF09939 IPR018684
DUF2172 Uncharacterized bacterial protein with aminopeptidase-like domain (DUF2172) PF09940 IPR019232
DUF2173 Uncharacterized conserved protein (DUF2173) PF09941 IPR018685
DUF2174 Uncharacterized conserved protein (DUF2174) PF09942 IPR019233
DUF2175 Uncharacterized protein conserved in archaea (DUF2175) PF09943 IPR018686
DUF2176 Uncharacterized protein conserved in bacteria (DUF2176) PF09944
DUF2177 Predicted membrane protein (DUF2177) PF09945 IPR018687
DUF2178 Predicted membrane protein (DUF2178) PF09946 IPR019235
DUF2179 Uncharacterized protein conserved in bacteria (DUF2179) PF10035 IPR019264
DUF218 DUF218 domain PF02698 IPR003848
DUF2180 Uncharacterized protein conserved in archaea (DUF2180) PF09947 IPR017211
DUF2181 Uncharacterized conserved protein (DUF2181) PF10223 IPR019356
DUF2182 Predicted metal-binding integral membrane protein (DUF2182) PF09948 IPR018688
DUF2183 Uncharacterized conserved protein (DUF2183) PF09949 IPR019236
DUF2184 Uncharacterized protein conserved in bacteria (DUF2184) PF09950 IPR020049
DUF2185 Uncharacterized protein conserved in bacteria (DUF2185) PF09951 IPR018689
DUF2186 Uncharacterized protein conserved in bacteria (DUF2186) PF09952 IPR019238
DUF2187 Uncharacterized protein conserved in bacteria (DUF2187) PF09953 IPR018690
DUF2188 Uncharacterized protein conserved in bacteria (DUF2188) PF09954 IPR018691
DUF2189 Predicted integral membrane protein (DUF2189) PF09955 IPR018692
DUF2190 Uncharacterized conserved protein (DUF2190) PF09956 IPR011231
DUF2191 Uncharacterized protein conserved in bacteria (DUF2191) PF09957 IPR019239
DUF2192 Uncharacterized protein conserved in archaea (DUF2192) PF09958 IPR018693
DUF2193 Uncharacterized protein conserved in archaea (DUF2193) PF09959 IPR018694
DUF2194 Uncharacterized protein conserved in bacteria (DUF2194) PF09960 IPR018695
DUF2195 Uncharacterized protein conserved in bacteria (DUF2195) PF09961 IPR018696
DUF2196 Uncharacterized conserved protein (DUF2196) PF09962 IPR019240
DUF2197 Uncharacterized protein conserved in bacteria (DUF2197) PF09963 IPR019241
DUF2198 Uncharacterized protein conserved in bacteria (DUF2198) PF09964 IPR019242
DUF2199 Uncharacterized protein conserved in bacteria (DUF2199) PF09965 IPR018697
DUF22 Domain of unknown function DUF22 PF01629 IPR002572
DUF220 Domain of unknown function DUF220 PF02713 IPR003863
DUF2200 Uncharacterized protein conserved in bacteria (DUF2200) PF09966 IPR014580
DUF2201 Predicted metallopeptidase (DUF2201) PF09967 IPR018698
DUF2202 Uncharacterized protein conserved in archaea (DUF2202) PF09968 IPR019243
DUF2203 Uncharacterized conserved protein (DUF2203) PF09969 IPR018699
DUF2204 Conserved Archaeal protein (DUF2204) PF09970 IPR018700
DUF2205 Predicted coiled-coil protein (DUF2205) PF10224 IPR019357
DUF2206 Predicted membrane protein (DUF2206) PF09971 IPR018701
DUF2207 Predicted membrane protein (DUF2207) PF09972 IPR018702
DUF2208 Predicted membrane protein (DUF2208) PF09973 IPR009198
DUF2209 Uncharacterized protein conserved in archaea (DUF2209) PF09974 IPR014514
DUF221 Domain of unknown function DUF221 PF02714 IPR003864
DUF2210 Uncharacterized conserved protein (DUF2210) PF09975
DUF2211 Predicted membrane protein (DUF2211) PF10034 IPR018732
DUF2212 Uncharacterized protein conserved in bacteria (DUF2212) PF09978
DUF2213 Uncharacterized protein conserved in bacteria (DUF2213) PF09979 IPR019246
DUF2214 Predicted membrane protein (DUF2214) PF09980 IPR018706
DUF2215 Uncharacterized conserved protein (DUF2215) PF10225 IPR019358
DUF2216 Uncharacterized conserved proteins (DUF2216) PF10226 IPR019359
DUF2217 Uncharacterized conserved protein (DUF2217) PF10265 IPR019392
DUF2218 Uncharacterized protein conserved in bacteria (DUF2218) PF09981 IPR014543
DUF2219 Uncharacterized protein conserved in bacteria (DUF2219) PF09982 IPR018707
DUF222 Domain of unknown function DUF222 PF02720 IPR003870
DUF2220 Uncharacterized protein conserved in bacteria (DUF2220) PF09983
DUF2222 Uncharacterized signal transduction histidine kinase domain (DUF2222) PF09984 IPR019247
DUF2223 Domain of unknown function (DUF2223) PF09985 IPR019248
DUF2224 Uncharacterized conserved protein (DUF2224) PF10227
DUF2225 Uncharacterized protein conserved in bacteria (DUF2225) PF09986 IPR018708
DUF2226 Uncharacterized protein conserved in archaea (DUF2226) PF09987 IPR019249
DUF2227 Uncharacterized metal-binding protein (DUF2227) PF09988 IPR019250
DUF2228 Uncharacterised conserved protein (DUF2228) PF10228 IPR019361
DUF2229 CoA enzyme activase uncharacterised domain (DUF2229) PF09989 IPR018709
DUF223 Domain of unknown function DUF223 PF02721 IPR003871
DUF2231 Predicted membrane protein (DUF2231) PF09990 IPR019251
DUF2232 Predicted membrane protein (DUF2232) PF09991 IPR018710
DUF2233 Predicted periplasmic protein (DUF2233) PF09992 IPR018711
DUF2234 Uncharacterized protein conserved in bacteria (DUF2234) PF09993
DUF2235 Uncharacterized conserved protein (DUF2235) PF09994 IPR018712
DUF2236 Uncharacterized protein conserved in bacteria (DUF2236) PF09995 IPR018713
DUF2237 Uncharacterized protein conserved in bacteria (DUF2237) PF09996 IPR018714
DUF2238 Predicted membrane protein (DUF2238) PF09997 IPR014509
DUF2239 Uncharacterized protein conserved in bacteria (DUF2239) PF09998 IPR018715
DUF2240 Uncharacterized protein conserved in archaea (DUF2240) PF09999 IPR018716
DUF2241 Uncharacterized protein conserved in bacteria (DUF2241) PF10000 IPR018717
DUF2242 Uncharacterized protein conserved in bacteria (DUF2242) PF10001 IPR018718
DUF2243 Predicted membrane protein (DUF2243) PF10002 IPR018719
DUF2244 Integral membrane protein (DUF2244) PF10003 IPR019253
DUF2246 Uncharacterized conserved protein (DUF2246) PF10229 IPR019362
DUF2247 Uncharacterized protein conserved in bacteria (DUF2247) PF10004 IPR016630
DUF2248 Uncharacterized protein conserved in bacteria (DUF2248) PF10005 IPR011201
DUF2249 Uncharacterized conserved protein (DUF2249) PF10006 IPR018720
DUF225 Domain of unknown function (DUF225) PF02795
DUF2250 Uncharacterized protein conserved in archaea (DUF2250) PF10007 IPR019254
DUF2251 Uncharacterized protein conserved in bacteria (DUF2251) PF10008 IPR014449
DUF2252 Uncharacterized protein conserved in bacteria (DUF2252) PF10009 IPR018721
DUF2253 Predicted membrane protein (DUF2253) PF10010
DUF2254 Predicted membrane protein (DUF2254) PF10011 IPR018723
DUF2255 Uncharacterized protein conserved in bacteria (DUF2255) PF10012 IPR016888
DUF2256 Uncharacterized protein conserved in bacteria (DUF2256) PF10013 IPR017136
DUF2257 Uncharacterized protein conserved in bacteria (DUF2257) PF10014 IPR018724
DUF2258 Uncharacterized protein conserved in archaea (DUF2258) PF10015 IPR017140
DUF2259 Predicted secreted protein (DUF2259) PF10016 IPR018725
DUF226 Borrelia family of unknown function DUF226 PF02890 IPR004180
DUF2260 Uncharacterized conserved protein (DUF2260) PF10017 IPR019257
DUF2261 Uncharacterized conserved protein (DUF2261) PF10019
DUF2262 Uncharacterized protein conserved in bacteria (DUF2262) PF10020 IPR019260
DUF2263 Uncharacterized protein conserved in bacteria (DUF2263) PF10021 IPR019261
DUF2264 Uncharacterized protein conserved in bacteria (DUF2264) PF10022 IPR016624
DUF2265 Predicted aminopeptidase (DUF2265) PF10023 IPR014553
DUF2266 Predicted integral membrane protein (DUF2266) PF10024
DUF2267 Uncharacterized conserved protein (DUF2267) PF10025 IPR018727
DUF2268 Predicted Zn-dependent protease (DUF2268) PF10026 IPR018728
DUF2269 Predicted integral membrane protein (DUF2269) PF10027 IPR018729
DUF227 Domain of unknown function (DUF227) PF02958 IPR004119
DUF2270 Predicted integral membrane protein (DUF2270) PF10028 IPR014470
DUF2271 Predicted periplasmic protein (DUF2271) PF10029
DUF2272 Uncharacterized protein conserved in bacteria (DUF2272) PF10030 IPR019262
DUF2273 Small integral membrane protein (DUF2273) PF10031 IPR018730
DUF2274 Protein of unknown function (DUF2274) PF10038 IPR018733
DUF2275 Predicted integral membrane protein (DUF2275) PF10039 IPR018734
DUF2276 Uncharacterized conserved protein (DUF2276) PF10040 IPR019267
DUF2277 Uncharacterized conserved protein (DUF2277) PF10041 IPR018735
DUF2278 Uncharacterized conserved protein (DUF2278) PF10042 IPR019268
DUF2279 Predicted periplasmic lipoprotein (DUF2279) PF10043 IPR018736
DUF228 Lyme disease proteins of unknown function PF02989 IPR004239
DUF2280 Uncharacterized conserved protein (DUF2280) PF10045 IPR018738
DUF2281 Protein of unknown function (DUF2281) PF10047 IPR018739
DUF2282 Predicted integral membrane protein (DUF2282) PF10048 IPR018740
DUF2283 Protein of unknown function (DUF2283) PF10049 IPR019270
DUF2284 Predicted metal-binding protein (DUF2284) PF10050 IPR019271
DUF2285 Uncharacterized conserved protein (DUF2285) PF10074 IPR018754
DUF2286 Uncharacterized protein conserved in archaea (DUF2286) PF10051 IPR017006
DUF2288 Protein of unknown function (DUF2288) PF10052 IPR018741
DUF229 Protein of unknown function (DUF229) PF02995 IPR004245
DUF2290 Uncharacterized conserved protein (DUF2290) PF10053 IPR018742
DUF2291 Predicted periplasmic lipoprotein (DUF2291) PF10054 IPR014582
DUF2292 Uncharacterized small protein (DUF2292) PF10055 IPR018743
DUF2293 Uncharacterized conserved protein (DUF2293) PF10056 IPR018744
DUF2294 Uncharacterized conserved protein (DUF2294) PF10057 IPR018745
DUF2296 Predicted integral membrane metal-binding protein (DUF2296) PF10058 IPR019273
DUF2297 Predicted secreted protein (DUF2297) PF10059
DUF2298 Uncharacterized membrane protein (DUF2298) PF10060 IPR018746
DUF2299 Uncharacterized conserved protein (DUF2299) PF10061 IPR018747
DUF23 Domain of unknown function PF01697 IPR008166
DUF230 Poxvirus proteins of unknown function PF03003 IPR004251
DUF2300 Predicted secreted protein (DUF2300) PF10062 IPR018748
DUF2301 Uncharacterized integral membrane protein (DUF2301) PF10063 IPR019275
DUF2302 Uncharacterized conserved protein (DUF2302) PF10064
DUF2303 Uncharacterized conserved protein (DUF2303) PF10065 IPR019276
DUF2304 Uncharacterized conserved protein (DUF2304) PF10066 IPR019277
DUF2305 Uncharacterised conserved protein (DUF2305) PF10230 IPR019363
DUF2306 Predicted membrane protein (DUF2306) PF10067 IPR018750
DUF2307 Uncharacterized domain associated with GTPases (DUF2307) PF10068
DUF2308 Predicted domain in sensory proteins (DUF2308) PF10069 IPR019278
DUF2309 Uncharacterized protein conserved in bacteria (DUF2309) PF10070 IPR018752
DUF231 Arabidopsis proteins of unknown function PF03005 IPR004253
DUF2310 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) PF10071 IPR016908
DUF2311 Predicted membrane protein (DUF2311) PF10072
DUF2312 Uncharacterized protein conserved in bacteria (DUF2312) PF10073 IPR018753
DUF2313 Uncharacterized protein conserved in bacteria (DUF2313) PF10076 IPR018755
DUF2314 Uncharacterized protein conserved in bacteria (DUF2314) PF10077 IPR018756
DUF2315 Uncharacterised conserved protein (DUF2315) PF10231 IPR018796
DUF2316 Uncharacterized protein conserved in bacteria (DUF2316) PF10078 IPR018757
DUF2317 Uncharacterized protein conserved in bacteria (DUF2317) PF10079 IPR011199
DUF2318 Predicted membrane protein (DUF2318) PF10080 IPR018758
DUF2319 Predicted membrane protein (DUF2319) PF10081 IPR012037
DUF2320 Uncharacterized protein conserved in bacteria (DUF2320) PF10082 IPR018759
DUF2321 Uncharacterized protein conserved in bacteria (DUF2321) PF10083 IPR016891
DUF2322 Uncharacterized protein conserved in bacteria (DUF2322) PF10084 IPR016755
DUF2324 Predicted membrane protein (DUF2324) PF10086 IPR011397
DUF2325 Uncharacterized protein conserved in bacteria (DUF2325) PF10087
DUF2326 Uncharacterized protein conserved in bacteria (DUF2326) PF10088 IPR018760
DUF2327 Uncharacterized protein conserved in bacteria (DUF2327) PF10089
DUF2328 Uncharacterized protein conserved in bacteria (DUF2328) PF10090 IPR018762
DUF2329 Uncharacterized protein conserved in bacteria (DUF2329) PF10091 IPR019282
DUF233 Odorant binding protein PF03027
DUF2330 Uncharacterized protein conserved in bacteria (DUF2330) PF10092 IPR019283
DUF2331 Uncharacterized protein conserved in bacteria (DUF2331) PF10093 IPR016633
DUF2332 Uncharacterized protein conserved in bacteria (DUF2332) PF10094 IPR011200
DUF2333 Uncharacterized protein conserved in bacteria (DUF2333) PF10095 IPR016936
DUF2334 Uncharacterized protein conserved in bacteria (DUF2334) PF10096 IPR018763
DUF2335 Predicted membrane protein (DUF2335) PF10097 IPR019284
DUF2336 Uncharacterized protein conserved in bacteria (DUF2336) PF10098 IPR019285
DUF2337 Uncharacterized protein conserved in bacteria (DUF2337) PF10099 IPR018764
DUF2338 Uncharacterized protein conserved in bacteria (DUF2338) PF10100 IPR016935
DUF2339 Predicted membrane protein (DUF2339) PF10101 IPR019286
DUF234 Archaea bacterial proteins of unknown function PF03008 IPR004256
DUF2340 Uncharacterized conserved protein (DUF2340) PF10209 IPR018794
DUF2341 Domain of unknown function (DUF2341) PF10102 IPR018765
DUF2342 Uncharacterised conserved protein (DUF2342) PF10103 IPR018766
DUF2343 Uncharacterised conserved protein (DUF2343) PF10173 IPR018786
DUF2344 Uncharacterized protein conserved in bacteria (DUF2344) PF10105 IPR018768
DUF2345 Uncharacterized protein conserved in bacteria (DUF2345) PF10106 IPR018769
DUF2346 Uncharacterized conserved protein (DUF2346) PF09803 IPR018625
DUF2347 Uncharacterized conserved protein (DUF2347) PF09804 IPR018626
DUF2348 Uncharacterized conserved protein (DUF2348) PF09807 IPR018627
DUF2349 Uncharacterized conserved protein (DUF2349) PF09779 IPR018617
DUF2351 Uncharacterized conserved protein (DUF2351) PF09814 IPR019193
DUF2352 Uncharacterized conserved protein (DUF2352) PF09817 IPR018630
DUF2353 Uncharacterized coiled-coil protein (DUF2353) PF09789 IPR019179
DUF2355 Predicted coiled-coil protein (DUF2355) PF10186 IPR018791
DUF2356 Conserved protein (DUF2356) PF10189 IPR019333
DUF2357 Domain of unknown function (DUF2357) PF09823 IPR018633
DUF2358 Uncharacterized conserved protein (DUF2358) PF10184 IPR018790
DUF2359 Uncharacterised conserved protein (DUF2359) PF10151 IPR019308
DUF236 Protein of unknown function PF03057 IPR004296
DUF2360 Predicted coiled-coil domain-containing protein (DUF2360) PF10152 IPR019309
DUF2361 Uncharacterised conserved protein (DUF2361) PF10153 IPR019310
DUF2362 Uncharacterized conserved protein (DUF2362) PF10154 IPR019311
DUF2363 Uncharacterized conserved protein (DUF2363) PF10155 IPR019312
DUF2364 Protein of unknown function (DUF2364) PF10156 IPR019313
DUF2365 Uncharacterized conserved protein (DUF2365) PF10157 IPR019314
DUF2366 Uncharacterised conserved protein (DUF2366) PF10171 IPR019322
DUF2367 Uncharacterized conserved protein (DUF2367) PF10164 IPR019317
DUF2368 Uncharacterised conserved protein (DUF2368) PF10166 IPR019319
DUF2369 Uncharacterised conserved protein (DUF2369) PF10179 IPR019326
DUF237 MG032/MG096/MG288 family 1 PF03072 IPR004306
DUF2370 Protein of unknown function (DUF2370) PF10176 IPR019325
DUF2371 Uncharacterised conserved protein (DUF2371) PF10177 IPR018787
DUF2372 Uncharacterised conserved protein (DUF2372) PF10178 IPR018788
DUF2373 Uncharacterised conserved protein (DUF2373) PF10180 IPR019327
DUF2374 Protein of unknown function (Duf2374) PF09574 IPR014175
DUF2375 Protein of unknown function (DUF2375) PF09558 IPR014271
DUF2376 Conserved hypothetical phage protein (DUF2376) PF09550 IPR019056
DUF2377 Putative phage tail protein (DUF2377) PF09540
DUF2378 Protein of unknown function (DUF2378) PF09536 IPR011751
DUF2379 Protein of unknown function (DUF2379) PF09543 IPR011753
DUF2380 Predicted lipoprotein of unknown function (DUF2380) PF09533 IPR011755
DUF2381 Protein of unknown function (DUF2381) PF09544 IPR011754
DUF2382 Domain of unknown function (DUF2382) PF09557 IPR019060
DUF2383 Protein of unknown function (DUF2383) PF09537 IPR019052
DUF2384 Protein of unknown function (DUF2384) PF09722
DUF2385 Protein of unknown function (DUF2385) PF09539 IPR012645
DUF2386 Protein of unknown function (DUF2386) PF09541
DUF2387 Probable metal-binding protein (DUF2387) PF09526 IPR012658
DUF2388 Protein of unknown function (DUF2388) PF09498 IPR012661
DUF2389 Tryptophan-rich protein (DUF2389) PF09493 IPR012663
DUF239 Arabidopsis proteins of unknown function PF03080 IPR004314
DUF2390 Protein of unknown function (DUF2390) PF09523 IPR012659
DUF2391 Putative integral membrane protein (DUF2391) PF09622
DUF2392 Protein of unknown function (DUF2392) PF10288 IPR019407
DUF2393 Protein of unknown function (DUF2393) PF09624 IPR013417
DUF2394 Domain of unknown function (DUF2394) PF10282
DUF2395 Protein of unknown function (DUF2395) PF09653
DUF2396 Protein of unknown function (DUF2396) PF09654 IPR013472
DUF2397 Protein of unknown function (DUF2397) PF09660 IPR013493
DUF2398 Protein of unknown function (DUF2398) PF09661 IPR013494
DUF2399 Protein of unknown function (DUF2399) PF09664
DUF24 HxlR-like helix-turn-helix PF01638 IPR002577
DUF240 MG032/MG096/MG288 family 2 PF03086 IPR004319
DUF2400 Protein of unknown function (DUF2400) PF09674 IPR014127
DUF2401 Putative secretory protein (DUF2401) PF10287 IPR018805
DUF2402 Putative GPI-anchored glycine-serine rich protein (DUF2402) PF10289
DUF2403 Glycine-rich protein domain (DUF2403) PF10290 IPR018807
DUF2404 Putative integral membrane protein conserved region (DUF2404) PF10296 IPR019411
DUF2405 Domain of unknown function (DUF2405) PF10293 IPR019409
DUF2406 Uncharacterised protein (DUF2406) PF10295 IPR018809
DUF2407 Putative membrane protein (DUF2407) PF10302 IPR019413
DUF2408 Protein of unknown function (DUF2408) PF10303 IPR018810
DUF241 Arabidopsis protein of unknown function PF03087 IPR004320
DUF2410 Hypothetical protein (DUF2410) PF10307 IPR018812
DUF2411 Domain of unknown function (DUF2411) PF10304 IPR019414
DUF2412 Hypothetical protein (DUF2412) PF10308
DUF2413 Protein of unknown function (DUF2413) PF10310 IPR018814
DUF2414 Protein of unknown function (DUF2414) PF10309 IPR019416
DUF2415 Uncharacterised protein domain (DUF2415) PF10313 IPR019417
DUF2416 Protein of unknown function (DUF2416) PF10315 IPR019419
DUF2417 Region of unknown function (DUF2417) PF10329 IPR019431
DUF2418 Protein of unknown function (DUF2418) PF10332 IPR018819
DUF2419 Protein of unknown function (DUF2419) PF10343 IPR019438
DUF2420 Protein of unknown function (DUF2420) PF10336 IPR018822
DUF2421 Protein of unknown function (DUF2421) PF10334 IPR018820
DUF2422 Protein of unknown function (DUF2422) PF10337 IPR018823
DUF2423 Protein of unknown function (DUF2423) PF10338 IPR019434
DUF2424 Protein of unknown function (DUF2424) PF10340 IPR019436
DUF2425 Protein of unknown function (DUF2425) PF10344
DUF2427 Domain of unknown function (DUF2427) PF10348 IPR018825
DUF2428 Putative death-receptor fusion protein (DUF2428) PF10350 IPR019442
DUF2429 Domain of unknown function (DUF2429) PF10352
DUF243 Domain of unknown function (DUF243) PF03103 IPR004145
DUF2430 Protein of unknown function (DUF2430) PF10353 IPR019445
DUF2431 Domain of unknown function (DUF2431) PF10354 IPR019446
DUF2432 Cytidylyltransferase C-terminal domain (DUF2432) PF10362 IPR019450
DUF2433 Protein of unknown function (DUF2433) PF10360 IPR018829
DUF2434 Protein of unknown function (DUF2434) PF10361 IPR018830
DUF2435 Protein of unknown function (DUF2435) PF10363 IPR019451
DUF2436 Domain of unknown function (DUF2436) PF10365 IPR018832
DUF2437 Domain of unknown function (DUF2437) PF10370 IPR018833
DUF2439 Protein of unknown function (DUF2439) PF10382 IPR018838
DUF244 Uncharacterized protein family (ORF7) DUF PF03112 IPR004335
DUF2441 Protein of unknown function (DUF2441) PF10386 IPR018840
DUF2442 Protein of unknown function (DUF2442) PF10387 IPR018841
DUF2443 Protein of unknown function (DUF2443) PF10398 IPR019469
DUF2448 Protein of unknown function C-terminus (DUF2448) PF10476 IPR018861
DUF245 Putative proteasome component PF03136 IPR004347
DUF2450 Protein of unknown function N-terminal domain (DUF2450) PF10475 IPR019515
DUF2451 Protein of unknown function C-terminus (DUF2451) PF10474 IPR019514
DUF2452 Protein of unknown function (DUF2452) PF10504 IPR019534
DUF2453 Protein of unknown function (DUF2453) PF10507 IPR019537
DUF2454 Protein of unknown function (DUF2454) PF10521 IPR018870
DUF2455 Protein of unknown function (DUF2455) PF10444
DUF2456 Protein of unknown function (DUF2456) PF10445 IPR018852
DUF2457 Protein of unknown function (DUF2457) PF10446 IPR018853
DUF2458 Protein of unknown function (DUF2458) PF10454 IPR018858
DUF2459 Protein of unknown function (DUF2459) PF09601 IPR011727
DUF246 Plant protein family PF03138
DUF2460 Conserved hypothetical protein 2217 (DUF2460) PF09343 IPR011740
DUF2461 Conserved hypothetical protein (DUF2461) PF09365 IPR012808
DUF2462 Protein of unknown function (DUF2462) PF09495 IPR019034
DUF2463 Protein of unknown function (DUF2463) PF09591 IPR019081
DUF2464 Protein of unknown function (DUF2464) PF10240 IPR018798
DUF2465 Protein of unknown function (DUF2465) PF10239 IPR018797
DUF2466 Protein of unknown function (DUF2466) PF04002 IPR001405
DUF2467 Domain of unknown function (DUF2467) PF10519
DUF2469 Protein of unknown function (DUF2469) PF10611 IPR019592
DUF247 Plant protein of unknown function PF03140 IPR004158
DUF2470 Protein of unknown function (DUF2470) PF10615 IPR019595
DUF2471 Protein of unknown function (DUF2471) PF10616 IPR018894
DUF2472 Protein of unknown function (DUF2742) PF10619
DUF2474 Protein of unknown function (DUF2474) PF10617 IPR018895
DUF2475 Uncharacterised protein family (UPF0573) PF10629 IPR018902
DUF2476 Uncharacterised protein family (UPF0572) PF10630 IPR018903
DUF2477 Uncharacterised protein family (UPF0574) PF10631 IPR018904
DUF2478 Protein of unknown function (DUF2478) PF10649 IPR018912
DUF2479 Domain of unknown function (DUF2479) PF10651 IPR018913
DUF248 Putative methyltransferase PF03141 IPR004159
DUF2480 Protein of unknown function (DUF2480) PF10652 IPR018914
DUF2481 Protein of unknown function (DUF2481) PF10654 IPR018916
DUF2482 Hypothetical protein of unknown function (DUF2482) PF10655 IPR018917
DUF2483 Hypothetical protein of unknown function (DUF2483) PF10656 IPR018918
DUF2484 Protein of unknown function (DUF2484) PF10658 IPR018919
DUF2485 Hypothetical bacterial protein (DUF2485) PF10664 IPR018922
DUF2486 Protein of unknown function (DUF2486) PF10667 IPR018924
DUF2487 Protein of unknown function (DUF2487) PF10673 IPR019615
DUF2488 Protein of unknown function (DUF2488) PF10674 IPR019616
DUF2489 Protein of unknown function (DUF2489) PF10675 IPR019617
DUF249 Multigene family 530 protein PF03158 IPR004858
DUF2490 Protein of unknown function (DUF2490) PF10677 IPR019619
DUF2491 Protein of unknown function (DUF2491) PF10679 IPR019621
DUF2492 Protein of unknown function (DUF2492) PF10678 IPR019620
DUF2493 Protein of unknown function (DUF2493) PF10686 IPR019627
DUF2495 Protein of unknown function (DUF2495) PF10687
DUF2496 Protein of unknown function (DUF2496) PF10689 IPR019630
DUF2497 Protein of unknown function (DUF2497) PF10691 IPR019632
DUF2498 Protein of unknown function (DUF2498) PF10692 IPR019633
DUF2499 Protein of unknown function (DUF2499) PF10693 IPR019634
DUF2500 Protein of unknown function (DUF2500) PF10694 IPR019635
DUF2501 Protein of unknown function (DUF2501) PF10696 IPR019637
DUF2502 Protein of unknown function (DUF2502) PF10697 IPR019638
DUF2503 Protein of unknown function (DUF2503) PF10700
DUF2505 Protein of unknown function (DUF2505) PF10698 IPR019639
DUF2506 Protein of unknown function (DUF2506) PF10701
DUF2507 Protein of unknown function (DUF2507) PF10702 IPR019642
DUF2508 Protein of unknown function (DUF2508) PF10704 IPR019644
DUF2509 Protein of unknown function (DUF2509) PF10713 IPR019652
DUF2510 Protein of unknown function (DUF2510) PF10708 IPR018929
DUF2511 Protein of unknown function (DUF2511) PF10709 IPR019648
DUF2512 Protein of unknown function (DUF2512) PF10710 IPR019649
DUF2513 Hypothetical protein (DUF2513) PF10711 IPR019650
DUF2514 Protein of unknown function (DUF2514) PF10721 IPR019659
DUF2515 Protein of unknown function (DUF2515) PF10720 IPR019658
DUF2516 Protein of unknown function (DUF2516) PF10724 IPR019662
DUF2517 Protein of unknown function (DUF2517) PF10725 IPR019663
DUF2518 Protein of function (DUF2518) PF10726 IPR019664
DUF2520 Domain of unknown function (DUF2520) PF10728 IPR018931
DUF2521 Protein of unknown function (DUF2521) PF10730 IPR019667
DUF2522 Protein of unknown function (DUF2522) PF10747 IPR019683
DUF2523 Protein of unknown function (DUF2523) PF10734 IPR019670
DUF2524 Protein of unknown function (DUF2524) PF10732 IPR019668
DUF2525 Protein of unknown function (DUF2525) PF10733 IPR019669
DUF2526 Protein of unknown function (DUF2526) PF10735 IPR019671
DUF2527 Protein of unknown function (DUF2627) PF10736 IPR019672
DUF2529 Protein of unknown function (DUF2529) PF10740 IPR019676
DUF2530 Protein of unknown function (DUF2530) PF10745 IPR019681
DUF2531 Protein of unknown function (DUF2531) PF10748 IPR019684
DUF2533 Protein of unknown function (DUF2533) PF10752 IPR019688
DUF2534 Protein of unknown function (DUF2534) PF10749 IPR019685
DUF2535 Protein of unknown function (DUF2535) PF10751 IPR019687
DUF2536 Protein of unknown function (DUF2536) PF10750 IPR019686
DUF255 Protein of unknown function, DUF255 PF03190 IPR004879
DUF2550 Protein of unknown function (DUF2550) PF10739 IPR019675
DUF2555 Protein of unknown function (DUF2555) PF10742 IPR019678
DUF2566 Protein of unknown function (DUF2566) PF10753 IPR019689
DUF2569 Protein of unknown function (DUF2569) PF10754 IPR019690
DUF257 Pyrococcus protein of unknown function, DUF257 PF03192 IPR005489
DUF258 Protein of unknown function, DUF258 PF03193 IPR004881
DUF2581 Protein of unknown function (DUF2581) PF10756 IPR019692
DUF2582 Protein of unknown function (DUF2582) PF10771 IPR019707
DUF2583 Protein of unknown function (DUF2583) PF10762 IPR019698
DUF2584 Protein of unknown function (DUF2584) PF10763 IPR019699
DUF2585 Protein of unknown function (DUF2585) PF10755 IPR019691
DUF2586 Protein of unknown function (DUF2586) PF10758 IPR019694
DUF2587 Protein of unknown function (DUF2587) PF10759 IPR019695
DUF2588 Protein of unknown function (DUF2588) PF10760
DUF2590 Protein of unknown function (DUF2590) PF10761 IPR019697
DUF2591 Protein of unknown function (DUF2591) PF10765 IPR019701
DUF2592 Protein of unknown function (DUF2592) PF10766 IPR019702
DUF2593 Protein of unknown function (DUF2593) PF10767 IPR019703
DUF2594 Protein of unknown function (DUF2594) PF10769 IPR019705
DUF2596 Protein of unknown function (DUF2596) PF10770 IPR019706
DUF2597 Protein of unknown function (DUF2598) PF10772 IPR019708
DUF2598 Protein of unknown function (DUF2598) PF10773
DUF2599 Protein of unknown function (DUF2599) PF10783 IPR019719
DUF26 Domain of unknown function DUF26 PF01657 IPR002902
DUF260 Protein of unknown function DUF260 PF03195 IPR004883
DUF2600 Protein of unknown function (DUF2600) PF10776 IPR019712
DUF2602 Protein of unknown function (DUF2602) PF10782 IPR019718
DUF2603 Protein of unknown function (DUF2603) PF10788 IPR019724
DUF2604 Protein of Unknown function (DUF2604) PF10790 IPR019726
DUF2605 Protein of unknown function (DUF2605) PF10792 IPR019728
DUF2606 Protein of unknown function, DUF2606 PF10794 IPR019730
DUF2607 Protein of unknown function (DUF2607) PF10795 IPR019731
DUF261 Protein of unknown function, DUF261 PF03196 IPR004884
DUF262 Protein of unknown function DUF262 PF03235 IPR004919
DUF263 Domain of unknown function DUF263 PF03236
DUF265 Protein of unknown function, DUF265 PF03266 IPR004948
DUF266 Domain of unknown function, DUF266 PF03267
DUF267 Caenorhabditis protein of unknown function, DUF267 PF03268 IPR004950
DUF268 Caenorhabditis protein of unknown function, DUF268 PF03269 IPR004951
DUF269 Protein of unknown function, DUF269 PF03270 IPR004952
DUF270 Protein of unknown function, DUF270 PF03189 IPR004878
DUF272 Protein of unknown function, DUF272 PF03312 IPR004987
DUF273 Protein of unknown function, DUF273 PF03314 IPR004988
DUF274 Protein of unknown function (DUF274) PF03409 IPR005071
DUF275 Actinomycetales protein of unknown function, DUF275 PF03316
DUF276 DUF276 PF03434 IPR005096
DUF278 DUF278 PF03353 IPR005020
DUF28 Domain of unknown function DUF28 PF01709 IPR002876
DUF281 Domain of unknown function (DUF281) PF03436 IPR005098
DUF282 Caenorhabditis protein of unknown function, DUF282 PF03380 IPR005044
DUF285 Mycoplasma protein of unknown function, DUF285 PF03382 IPR005046
DUF287 Drosophila protein of unknown function, DUF287 PF03384 IPR005048
DUF288 Protein of unknown function, DUF288 PF03385 IPR005049
DUF29 Domain of unknown function DUF29 PF01724 IPR002636
DUF290 Transthyretin-like family PF01060 IPR001534
DUF291 Domain of unknown function PF03442 IPR005102
DUF292 Eukaryotic protein of unknown function, DUF292 PF03398 IPR005061
DUF293 Domain of unknown function PF03444 IPR005104
DUF294 Putative nucleotidyltransferase DUF294 PF03445 IPR005105
DUF294_C Putative nucleotidyltransferase substrate binding domain PF10335 IPR018821
DUF295 Protein of unknown function (DUF295) PF03478 IPR005174
DUF296 Domain of unknown function (DUF296) PF03479 IPR005175
DUF297 TM1410 hypothetical-related protein PF03537 IPR004352
DUF298 Domain of unknown function (DUF298) PF03556 IPR005176
DUF299 Domain of unknown function (DUF299) PF03618 IPR005177
DUF30 Domain of unknown function DUF30 PF01727
DUF300 Domain of unknown function PF03619 IPR005178
DUF302 Domain of unknown function DUF302 PF03625 IPR005180
DUF303 Domain of unknown function (DUF303) PF03629 IPR005181
DUF304 Bacterial membrane flanked domain PF03703 IPR005182
DUF305 Domain of unknown function (DUF305) PF03713 IPR005183
DUF307 Domain of unknown function (DUF307) PF03733 IPR005185
DUF308 Short repeat of unknown function (DUF308) PF03729 IPR005325
DUF309 Domain of unknown function (DUF309) PF03745 IPR005500
DUF31 Domain of unknown function DUF31 PF01732 IPR022382
DUF310 Protein of unknown function (DUF310) PF03750 IPR010149
DUF313 Domain of unknown function (DUF313) PF03754 IPR005508
DUF316 Domain of unknown function (DUF316) PF03761 IPR005514
DUF318 Predicted permease PF03773 IPR005524
DUF320 Small secreted domain (DUF320) PF03777 IPR005528
DUF321 Protein of unknown function (DUF321) PF03778 IPR005529
DUF322 Protein of unknown function (DUF322) PF03780 IPR005531
DUF323 Domain of unknown function (DUF323) PF03781 IPR005532
DUF325 Viral domain of unknown function PF03804 IPR003225
DUF326 Domain of Unknown Function (DUF326) PF03860 IPR005560
DUF327 Protein of unknown function (DUF327) PF03885 IPR005585
DUF328 Protein of unknown function (DUF328) PF03883 IPR005583
DUF329 Domain of unknown function (DUF329) PF03884 IPR005584
DUF330 Protein of unknown function (DUF330) PF03886 IPR005586
DUF331 Domain of unknown function PF03889 IPR005589
DUF333 Domain of unknown function (DUF333) PF03891 IPR005590
DUF334 Domain of unknown function (DUF334) PF03904 IPR005602
DUF335 Putative metallopeptidase (SprT family) PF03926
DUF336 Domain of unknown function (DUF336) PF03928 IPR005624
DUF339 Protein of unknown function (DUF339) PF03937 IPR005631
DUF340 Membrane protein of unknown function (DUF340) PF03956 IPR005642
DUF342 Protein of unknown function (DUF342) PF03961 IPR005646
DUF346 Repeat of unknown function (DUF346) PF03984 IPR007132
DUF347 Repeat of Unknown Function (DUF347) PF03988 IPR007136
DUF348 Domain of unknown function (DUF348) PF03990 IPR007137
DUF349 Domain of Unknown Function (DUF349) PF03993 IPR007139
DUF35 Domain of unknown function DUF35 PF01796 IPR002878
DUF350 Domain of Unknown Function (DUF350) PF03994 IPR007140
DUF354 Protein of unknown function (DUF354) PF04007 IPR007152
DUF356 Protein of unknown function (DUF356) PF04009 IPR007154
DUF357 Protein of unknown function (DUF357) PF04010 IPR007155
DUF358 Protein of unknown function (DUF358) PF04013 IPR007158
DUF359 Protein of unknown function (DUF359) PF04019 IPR007164
DUF360 Membrane protein of unknown function PF04020 IPR007165
DUF362 Domain of unknown function (DUF362) PF04015 IPR007160
DUF364 Domain of unknown function (DUF364) PF04016 IPR007161
DUF365 Domain of unknown function (DUF365) PF04033 IPR007176
DUF366 Domain of unknown function (DUF366) PF04017 IPR007162
DUF367 Domain of unknown function (DUF367) PF04034 IPR007177
DUF368 Domain of unknown function (DUF368) PF04018 IPR007163
DUF369 Domain of unknown function (DUF369) PF04126
DUF37 Domain of unknown function DUF37 PF01809 IPR002696
DUF370 Domain of unknown function (DUF370) PF04025 IPR007169
DUF371 Domain of unknown function (DUF371) PF04027 IPR007171
DUF372 Domain of unknown function (DUF372) PF04036 IPR007179
DUF373 Domain of unknown function (DUF373) PF04123 IPR007254
DUF374 Domain of unknown function (DUF374) PF04028 IPR007172
DUF377 Domain of unknown function (DUF377) PF04041 IPR007184
DUF378 Domain of unknown function (DUF378) PF04070 IPR007211
DUF381 Domain of unknown function (DUF381) PF04038 IPR007181
DUF382 Domain of unknown function (DUF382) PF04037 IPR007180
DUF383 Domain of unknown function (DUF383) PF04063 IPR007205
DUF384 Domain of unknown function (DUF384) PF04064 IPR007206
DUF385 Domain of unknown function (DUF385) PF04075 IPR004378
DUF386 Domain of unknown function (DUF386) PF04074 IPR004375
DUF387 Putative transcriptional regulators (Ypuh-like) PF04079 IPR005234
DUF389 Domain of unknown function (DUF389) PF04087 IPR005240
DUF39 Domain of unknown function DUF39 PF01837 IPR002708
DUF390 Protein of unknown function (DUF390) PF04094 IPR007228
DUF393 Protein of unknown function, DUF393 PF04134 IPR007263
DUF395 YeeE/YedE family (DUF395) PF04143 IPR007272
DUF397 Domain of unknown function (DUF397) PF04149 IPR007278
DUF399 Protein of unknown function, DUF399 PF04187 IPR007314
DUF400 Protein of unknown function, DUF400 PF04164 IPR007293
DUF401 Protein of unknown function (DUF401) PF04165 IPR007294
DUF402 Protein of unknown function (DUF402) PF04167 IPR007295
DUF403 Bacterial domain of unknown function (DUF403) PF04168 IPR007296
DUF404 Domain of unknown function (DUF404) PF04169 IPR007297
DUF405 Protein of unknown function (DUF405) PF04171
DUF406 Protein of unknown function (DUF406) PF04175 IPR005272
DUF407 Domain of unknown function (DUF407) PF04174 IPR007302
DUF410 Protein of unknown function (DUF410) PF04190 IPR007317
DUF411 Protein of unknown function, DUF PF04214 IPR007332
DUF412 Protein of unknown function, DUF412 PF04217 IPR007334
DUF413 Protein of unknown function, DUF PF04219 IPR007335
DUF414 Protein of unknown function, DUF414 PF04220 IPR007336
DUF416 Protein of unknown function, DUF PF04222 IPR007338
DUF417 Protein of unknown function, DUF417 PF04224 IPR007339
DUF418 Protein of unknown function (DUF418) PF04235 IPR007349
DUF419 Protein of unknown function (DUF419) PF04237 IPR007351
DUF420 Protein of unknown function (DUF420) PF04238 IPR007352
DUF421 Protein of unknown function (DUF421) PF04239 IPR007353
DUF422 Protein of unknown function (DUF422) PF04240 IPR007354
DUF423 Protein of unknown function (DUF423) PF04241 IPR006696
DUF424 Protein of unknown function (DUF424) PF04242 IPR007355
DUF427 Domain of unknown function (DUF427) PF04248 IPR007361
DUF429 Protein of unknown function (DUF429) PF04250 IPR007362
DUF43 Protein of unknown function DUF43 PF01861 IPR002723
DUF432 Protein of unknown function (DUF432) PF04254 IPR007366
DUF433 Protein of unknown function (DUF433) PF04255 IPR007367
DUF434 Protein of unknown function (DUF434) PF04256 IPR007368
DUF436 Protein of unknown function (DUF436) PF04260 IPR006340
DUF438 Family of unknown function (DUF438) PF04282 IPR007380
DUF439 Protein of unknown function (DUF439) PF04283 IPR007381
DUF440 Protein of unknown function, DUF440 PF04269 IPR007376
DUF441 Protein of unknown function (DUF441) PF04284 IPR007382
DUF442 Putative phosphatase (DUF442) PF04273 IPR005939
DUF443 Protein of unknown function (DUF443) PF04276 IPR005915
DUF444 Protein of unknown function (DUF444) PF04285 IPR006698
DUF445 Protein of unknown function (DUF445) PF04286 IPR007383
DUF446 Domain of unknown function, DUF446 PF04287 IPR007384
DUF447 Protein of unknown function (DUF447) PF04289 IPR007386
DUF448 Protein of unknown function (DUF448) PF04296 IPR007393
DUF45 Protein of unknown function DUF45 PF01863 IPR002725
DUF452 Protein of unknown function (DUF452) PF04301 IPR007398
DUF454 Protein of unknown function (DUF454) PF04304 IPR007401
DUF455 Protein of unknown function (DUF455) PF04305 IPR007402
DUF456 Protein of unknown function (DUF456) PF04306 IPR007403
DUF457 Predicted membrane-bound metal-dependent hydrolase (DUF457) PF04307 IPR007404
DUF458 Protein of unknown function (DUF458) PF04308 IPR007405
DUF459 Protein of unknown function (DUF459) PF04311 IPR007407
DUF46 Putative integral membrane protein DUF46 PF01864 IPR002726
DUF460 Protein of unknown function (DUF460) PF04312 IPR007408
DUF461 Protein of unknown function (DUF461) PF04314 IPR007410
DUF462 Protein of unknown function, DUF462 PF04315 IPR007411
DUF463 YcjX-like family, DUF463 PF04317 IPR007413
DUF464 Protein of unknown function (DUF464) PF04327 IPR007422
DUF465 Protein of unknown function (DUF465) PF04325 IPR007420
DUF466 Protein of unknown function (DUF466) PF04328 IPR007423
DUF468 Protein of unknown function (DUF468) PF04318 IPR007414
DUF469 Protein with unknown function (DUF469) PF04320 IPR007416
DUF470 Family of unknown function (DUF470) PF04329
DUF471 Family of unknown function (DUF471) PF04330
DUF472 Family of unknown function (DUF472) PF04331
DUF473 Protein of unknown function (DUF473) PF04322 IPR007417
DUF474 Protein of unknown function (DUF474) PF04323
DUF475 Protein of unknown function (DUF475) PF04332 IPR007427
DUF477 Domain of unknown function (DUF477) PF04536 IPR007621
DUF478 Protein of unknown function (DUF478) PF04334 IPR007429
DUF479 Protein of unknown function, DUF479 PF04336 IPR007431
DUF48 Protein of unknown function DUF48 PF01867 IPR002729
DUF480 Protein of unknown function, DUF480 PF04337 IPR007432
DUF481 Protein of unknown function, DUF481 PF04338 IPR007433
DUF482 Protein of unknown function, DUF482 PF04339 IPR007434
DUF483 Protein of unknown function (DUF483) PF04467 IPR007556
DUF484 Protein of unknown function, DUF484 PF04340 IPR007435
DUF485 Protein of unknown function, DUF485 PF04341 IPR007436
DUF486 Protein of unknown function, DUF486 PF04342 IPR007437
DUF488 Protein of unknown function, DUF488 PF04343 IPR007438
DUF489 Protein of unknown function (DUF489) PF04356 IPR007451
DUF490 Family of unknown function (DUF490) PF04357 IPR007452
DUF493 Protein of unknown function (DUF493) PF04359 IPR007454
DUF494 Protein of unknown function (DUF494) PF04361 IPR007456
DUF496 Protein of unknown function (DUF496) PF04363 IPR007458
DUF497 Protein of unknown function (DUF497) PF04365 IPR007460
DUF498 Protein of unknown function (DUF498/DUF598) PF04430 IPR007523
DUF499 Protein of unknown function (DUF499) PF04465 IPR007555
DUF500 Family of unknown function (DUF500) PF04366 IPR007461
DUF501 Protein of unknown function (DUF501) PF04417 IPR007511
DUF502 Protein of unknown function (DUF502) PF04367 IPR007462
DUF503 Protein of unknown function (DUF503) PF04456 IPR007546
DUF504 Protein of unknown function (DUF504) PF04457 IPR007547
DUF505 Protein of unknown function (DUF505) PF04458 IPR007548
DUF506 Protein of unknown function (DUF506) PF04720 IPR006502
DUF507 Protein of unknown function (DUF507) PF04368 IPR007463
DUF508 Domain of unknown function (DUF508) PF04370 IPR007465
DUF509 Protein of unknown function (DUF509) PF04416
DUF511 Protein of unknown function (DUF511) PF04373 IPR007468
DUF512 Protein of unknown function (DUF512) PF04459 IPR007549
DUF515 Protein of unknown function (DUF515) PF04415 IPR007509
DUF519 Protein of unknown function (DUF519) PF04378 IPR007473
DUF520 Protein of unknown function (DUF520) PF04461 IPR007551
DUF521 Protein of unknown function (DUF521) PF04412 IPR007506
DUF522 Protein of unknown function (DUF522) PF04462
DUF523 Protein of unknown function (DUF523) PF04463 IPR007553
DUF524 Protein of unknown function (DUF524) PF04411 IPR007505
DUF525 Protein of unknown function (DUF525) PF04379 IPR007474
DUF526 Protein of unknown function (DUF526) PF04380 IPR007475
DUF528 Protein of unknown function (DUF528) PF04384 IPR007479
DUF530 Protein of unknown function (DUF530) PF04409 IPR007503
DUF531 Protein of unknown function (DUF531) PF04407 IPR007501
DUF533 Protein of unknown function (DUF533) PF04391 IPR007486
DUF535 Protein of unknown function (DUF535) PF04393 IPR007488
DUF536 Protein of unknown function, DUF536 PF04394 IPR007489
DUF537 Protein of unknown function, DUF537 PF04396
DUF538 Protein of unknown function, DUF538 PF04398 IPR007493
DUF539 Protein of unknown function (DUF539) PF04400 IPR007495
DUF54 Protein of unknown function DUF54 PF01877 IPR002739
DUF540 Protein of unknown function (DUF540) PF04401 IPR007496
DUF541 Protein of unknown function (DUF541) PF04402 IPR007497
DUF543 Domain of unknown function (DUF543) PF04418 IPR007512
DUF544 Protein of unknown function (DUF544) PF04424 IPR007518
DUF547 Protein of unknown function, DUF547 PF04784 IPR006869
DUF548 Protein of unknown function (DUF548) PF04445 IPR007536
DUF55 Protein of unknown function DUF55 PF01878 IPR002740
DUF550 Protein of unknown function (DUF550) PF04447 IPR007538
DUF551 Protein of unknown function (DUF551) PF04448 IPR007539
DUF552 Protein of unknown function (DUF552) PF04472 IPR007561
DUF553 Transglutaminase-like domain PF04473 IPR007562
DUF554 Protein of unknown function (DUF554) PF04474 IPR007563
DUF555 Protein of unknown function (DUF555) PF04475 IPR007564
DUF556 Protein of unknown function (DUF556) PF04476 IPR007565
DUF557 Protein of unknown function (DUF557) PF04477
DUF559 Protein of unknown function (DUF559) PF04480 IPR007569
DUF560 Protein of unknown function (DUF560) PF04575 IPR007655
DUF561 Protein of unknown function (DUF561) PF04481 IPR007570
DUF562 Protein of unknown function (DUF562) PF04763 IPR006850
DUF563 Protein of unknown function (DUF563) PF04577 IPR007657
DUF564 Protein of unknown function (DUF564) PF04482
DUF565 Protein of unknown function (DUF565) PF04483 IPR007572
DUF566 Family of unknown function (DUF566) PF04484 IPR007573
DUF567 Protein of unknown function (DUF567) PF04525 IPR007612
DUF568 Protein of unknown function (DUF568) PF04526 IPR007613
DUF569 Protein of unknown function (DUF569) PF04601 IPR007679
DUF57 Protein of unknown function DUF57 PF01881 IPR002743
DUF570 Protein of unknown function (DUF570) PF04489 IPR007578
DUF571 Protein of unknown function (DUF571) PF04600 IPR006707
DUF572 Family of unknown function (DUF572) PF04502 IPR007590
DUF573 Protein of unknown function, DUF573 PF04504 IPR007592
DUF574 Protein of unknown function (DUF574) PF04672 IPR006764
DUF575 Protein of unknown function (DUF575) PF04746 IPR006835
DUF576 Protein of unknown function, DUF576 PF04507 IPR007595
DUF577 Family of unknown function (DUF577) PF04510 IPR007598
DUF579 Protein of unknown function (DUF579) PF04669 IPR021148
DUF58 Protein of unknown function DUF58 PF01882 IPR002881
DUF580 Protein of unknown function, DUF580 PF04515 IPR007603
DUF581 Protein of unknown function (DUF581) PF04570 IPR007650
DUF582 Protein of unknown function, DUF582 PF04518 IPR007606
DUF583 Protein of unknown function, DUF583 PF04519 IPR007607
DUF584 Protein of unknown function, DUF584 PF04520 IPR007608
DUF585 Protein of unknown function (DUF585) PF04522 IPR007610
DUF586 Protein of unknown function, DUF586 PF04524
DUF587 Protein of unknown function (DUF587) PF04532 IPR007618
DUF588 Domain of unknown function (DUF588) PF04535 IPR006702
DUF59 Domain of unknown function DUF59 PF01883 IPR002744
DUF590 Protein of unknown function, DUF590 PF04547 IPR007632
DUF591 Protein of unknown function PF04569 IPR007649
DUF592 Protein of unknown function (DUF592) PF04574 IPR007654
DUF593 Protein of unknown function, DUF593 PF04576 IPR007656
DUF594 Protein of unknown function, DUF594 PF04578 IPR007658
DUF595 Protein of unknown function, DUF595 PF04590
DUF596 Protein of unknown function, DUF596 PF04591 IPR007670
DUF599 Protein of unknown function, DUF599 PF04654 IPR006747
DUF6 Integral membrane protein DUF6 PF00892 IPR000620
DUF600 Protein of unknown function, DUF600 PF04634 IPR006728
DUF601 Protein of unknown function, DUF601 PF04642 IPR006736
DUF602 Protein of unknown function, DUF602 PF04641
DUF603 Protein of unknown function, DUF603 PF04645 IPR006739
DUF604 Protein of unknown function, DUF604 PF04646 IPR006740
DUF605 Vta1 like PF04652 IPR006745
DUF606 Protein of unknown function, DUF606 PF04657 IPR006750
DUF607 Protein of unknown function, DUF607 PF04678 IPR006769
DUF608 Protein of unknown function, DUF608 PF04685 IPR006775
DUF61 Protein of unknown function DUF61 PF01886 IPR002746
DUF612 Protein of unknown function, DUF612 PF04747 IPR006836
DUF613 Protein of unknown function (DUF613) PF04764 IPR006851
DUF615 Protein of unknown function (DUF615) PF04751 IPR006839
DUF616 Protein of unknown function (DUF616) PF04765 IPR006852
DUF617 Protein of unknown function, DUF617 PF04759 IPR006460
DUF618 Protein of unknown function, DUF618 PF04818 IPR006903
DUF619 Protein of unknown function (DUF619) PF04768 IPR006855
DUF62 Protein of unknown function DUF62 PF01887 IPR002747
DUF620 Protein of unknown function (DUF620) PF04788 IPR006873
DUF621 Protein of unknown function (DUF621) PF04789 IPR006874
DUF622 Protein of unknown function, DUF622 PF04822 IPR006907
DUF623 Protein of unknown function, DUF623 PF04844 IPR006458
DUF624 Protein of unknown function, DUF624 PF04854 IPR006938
DUF625 Protein of unknown function (DUF625) PF04802 IPR006887
DUF626 Protein of unknown function (DUF626) PF04776 IPR006462
DUF627 Protein of unknown function (DUF627) PF04781 IPR006866
DUF629 Protein of unknown function (DUF629) PF04780 IPR006865
DUF63 Membrane protein of unknown function DUF63 PF01889 IPR002749
DUF630 Protein of unknown function (DUF630) PF04783 IPR006868
DUF632 Protein of unknown function (DUF632) PF04782 IPR006867
DUF633 Family of unknown function (DUF633) PF04816 IPR006901
DUF634 Protein of unknown function (DUF634) PF04826 IPR006911
DUF637 Possible hemagglutinin (DUF637) PF04830 IPR006915
DUF638 Possible hemagglutinin (DUF638) PF04829 IPR006914
DUF639 Plant protein of unknown function (DUF639) PF04842 IPR006927
DUF640 Protein of unknown function (DUF640) PF04852 IPR006936
DUF641 Plant protein of unknown function (DUF641) PF04859 IPR006943
DUF642 Protein of unknown function, DUF642 PF04862 IPR006946
DUF643 Protein of unknown function (DUF643) PF04867 IPR006951
DUF644 Protein of unknown function, DUF644 PF04870 IPR006954
DUF645 Protein of unknown function, DUF645 PF04875 IPR006959
DUF646 Bacteriophage protein of unknown function (DUF646) PF04883 IPR006967
DUF647 Protein of unknown function, DUF647 PF04884 IPR006968
DUF648 Family of unknown function (DUF648) PF04890 IPR006974
DUF650 Archaeal protein of unknown function (DUF650) PF04894 IPR006978
DUF651 Archaeal protein of unknown function (DUF651) PF04895 IPR006979
DUF654 Protein of unknown function, DUF654 PF04910 IPR006994
DUF655 Protein of unknown function, DUF655 PF04919 IPR007003
DUF656 Family of unknown function (DUF656) PF04920 IPR007004
DUF658 Protein of unknown function (DUF 658) PF04936 IPR007020
DUF659 Protein of unknown function (DUF 659) PF04937 IPR007021
DUF661 Uncharacterised BCR (COG3801) PF04944
DUF662 Family of unknown function (DUF662) PF04949 IPR007033
DUF663 Protein of unknown function (DUF663) PF04950 IPR007034
DUF664 Protein of unknown function (DUF664) PF04978 IPR007061
DUF666 Protein of unknown function (DUF666) PF05006 IPR007703
DUF667 Protein of unknown function (DUF667) PF05018 IPR007714
DUF668 Protein of unknown function (DUF668) PF05003 IPR007700
DUF669 Protein of unknown function (DUF669) PF05037 IPR007731
DUF672 Protein of unknown function (DUF672) PF05050 IPR007744
DUF673 Protein of unknown function (DUF673) PF05054 IPR007748
DUF674 Protein of unknown function (DUF674) PF05056 IPR007750
DUF676 Putative serine esterase (DUF676) PF05057 IPR007751
DUF677 Protein of unknown function (DUF677) PF05055 IPR007749
DUF678 Protein of unknown function (DUF678) PF05077 IPR007769
DUF679 Protein of unknown function (DUF679) PF05078 IPR007770
DUF680 Protein of unknown function (DUF680) PF05079 IPR007771
DUF681 Protein of unknown function (DUF681) PF05080 IPR007772
DUF682 Protein of unknown function (DUF682) PF05081 IPR007773
DUF683 Protein of unknown function (DUF683) PF05082 IPR007774
DUF684 Protein of unknown function (DUF684) PF05075 IPR007767
DUF685 Protein of unknown function (DUF685) PF05085 IPR007777
DUF686 Protein of unknown function (DUF686) PF05092 IPR007784
DUF687 Protein of unknown function (DUF687) PF05095 IPR007787
DUF688 Protein of unknown function (DUF688) PF05097 IPR007789
DUF689 Anamorsin family PF05093 IPR007785
DUF690 Protein of unknown function (DUF690) PF05108 IPR007795
DUF692 Protein of unknown function (DUF692) PF05114 IPR007801
DUF693 Protein of unknown function (DUF693) PF05113 IPR007800
DUF694 Family of unknown function (DUF694) PF05107 IPR006482
DUF695 Family of unknown function (DUF695) PF05117 IPR016097
DUF697 Family of unknown function (DUF697) PF05128 IPR021147
DUF699 Putative ATPase (DUF699) PF05127 IPR007807
DUF70 Protein of unknown function DUF70 PF01901 IPR002760
DUF702 Domain of unknown function (DUF702) PF05142 IPR007818
DUF705 Protein of unknown function (DUF705) PF05152 IPR007827
DUF706 Family of unknown function (DUF706) PF05153 IPR007828
DUF707 Protein of unknown function (DUF707) PF05212 IPR007877
DUF708 Protein of unknown function (DUF708) PF05341 IPR008005
DUF711 Uncharacterized ACR (DUF711) PF05167 IPR007841
DUF713 Protein of unknown function (DUF713) PF05218
DUF714 Domain of unknown function PF05197 IPR007866
DUF716 Family of unknown function (DUF716) PF04819 IPR006904
DUF717 Protein of unknown function (DUF717) PF05338 IPR008002
DUF718 Protein of unknown function (DUF718) PF05336 IPR008000
DUF719 Protein of unknown function (DUF719) PF05334 IPR007998
DUF72 Protein of unknown function DUF72 PF01904 IPR002763
DUF720 Protein of unknown function (DUF720) PF05302 IPR007966
DUF721 Protein of unknown function (DUF721) PF05258 IPR007922
DUF722 Protein of unknown function (DUF722) PF05263 IPR007927
DUF723 Protein of unknown function (DUF723) PF05265 IPR007929
DUF724 Protein of unknown function (DUF724) PF05266 IPR007930
DUF725 Protein of unknown function (DUF725) PF05267 IPR007931
DUF726 Protein of unknown function (DUF726) PF05277 IPR007941
DUF727 Protein of unknown function (DUF727) PF05303 IPR007967
DUF728 Protein of unknown function (DUF728) PF05304 IPR007968
DUF729 Protein of unknown function (DUF729) PF05308 IPR007972
DUF73 Protein of unknown function DUF73 PF01905
DUF730 Protein of unknown function (DUF730) PF05325 IPR007989
DUF732 Protein of unknown function (DUF732) PF05305 IPR007969
DUF733 Protein of unknown function (DUF733) PF05306 IPR007970
DUF734 Protein of unknown function (DUF734) PF05243
DUF735 Protein of unknown function (DUF735) PF05246 IPR007910
DUF736 Protein of unknown function (DUF736) PF05284 IPR007948
DUF737 Protein of unknown function (DUF737) PF05300 IPR007964
DUF738 Protein of unknown function (DUF738) PF05301 IPR007965
DUF739 Protein of unknown function (DUF739) PF05339 IPR008003
DUF74 Domain of unknown function DUF74 PF01906 IPR002765
DUF740 Protein of unknown function (DUF740) PF05340 IPR008004
DUF742 Protein of unknown function (DUF742) PF05331 IPR007995
DUF743 Protein of unknown function (DUF743) PF05332 IPR007996
DUF745 Protein of unknown function (DUF745) PF05335 IPR007999
DUF746 Domain of Unknown Function (DUF746) PF05344 IPR008008
DUF747 Eukaryotic membrane protein family PF05346 IPR008010
DUF748 Domain of Unknown Function (DUF748) PF05359 IPR008023
DUF749 Domain of unknown function (DUF749) PF05370 IPR008032
DUF75 Protein of unknown function DUF75 PF01908
DUF750 Domain of unknown function (DUF750) PF04721 IPR006588
DUF751 Protein of unknown function (DUF751) PF05421 IPR008470
DUF752 Protein of unknown function (DUF752) PF05430 IPR008471
DUF753 Protein of unknown function (DUF753) PF05444 IPR008472
DUF754 Protein of unknown function (DUF754) PF05449 IPR008473
DUF755 Domain of unknown function (DUF755) PF05501 IPR008474
DUF756 Domain of unknown function (DUF756) PF05506 IPR008475
DUF757 Domain of Unknown Function (DUF757) PF05516
DUF758 Domain of unknown function (DUF758) PF05527 IPR008477
DUF759 Borrelia burgdorferi protein of unknown function (DUF759) PF05537 IPR008478
DUF760 Protein of unknown function (DUF760) PF05542 IPR008479
DUF761 Cotton fibre expressed protein PF05553 IPR008480
DUF762 Coxiella burnetii protein of unknown function (DUF762) PF05555 IPR008481
DUF763 Protein of unknown function (DUF763) PF05559 IPR008482
DUF764 Borrelia burgdorferi protein of unknown function (DUF764) PF05561 IPR008483
DUF765 Circovirus protein of unknown function (DUF765) PF05570 IPR008484
DUF766 Protein of unknown function (DUF766) PF05571 IPR008485
DUF768 Protein of unknown function (DUF768) PF05589 IPR008486
DUF769 Xylella fastidiosa protein of unknown function (DUF769) PF05590 IPR008487
DUF77 Domain of unknown function DUF77 PF01910 IPR002767
DUF770 Protein of unknown function (DUF770) PF05591 IPR008312
DUF771 Domain of unknown function (DUF771) PF05595 IPR008489
DUF772 Sulfolobus solfataricus protein of unknown function (DUF772) PF05598 IPR008490
DUF773 Protein of unknown function (DUF773) PF05600 IPR008491
DUF775 Protein of unknown function (DUF775) PF05603 IPR008493
DUF776 Protein of unknown function (DUF776) PF05604 IPR008494
DUF777 Borrelia burgdorferi protein of unknown function (DUF777) PF05606 IPR008495
DUF778 Protein of unknown function (DUF778) PF05608 IPR008496
DUF779 Protein of unknown function (DUF779) PF05610 IPR008497
DUF780 Caenorhabditis elegans protein of unknown function (DUF780) PF05611 IPR008498
DUF781 Mouse protein of unknown function (DUF781) PF05612 IPR008499
DUF782 Circovirus protein of unknown function (DUF782) PF05614 IPR008500
DUF784 Protein of unknown function (DUF784) PF05617 IPR008502
DUF785 Protein of unknown function (DUF785) PF05618 IPR008503
DUF786 Protein of unknown function (DUF786) PF05646
DUF787 Borrelia burgdorferi protein of unknown function (DUF787) PF05619 IPR008505
DUF788 Protein of unknown function (DUF788) PF05620 IPR008506
DUF789 Protein of unknown function (DUF789) PF05623 IPR008507
DUF790 Protein of unknown function (DUF790) PF05626 IPR008508
DUF791 Protein of unknown function (DUF791) PF05631 IPR008509
DUF792 Borrelia burgdorferi protein of unknown function (DUF792) PF05632 IPR008510
DUF793 Protein of unknown function (DUF793) PF05633 IPR008511
DUF794 Arabidopsis thaliana protein of unknown function (DUF794) PF05634 IPR008512
DUF795 Protein of unknown function (DUF795) PF05636 IPR008513
DUF796 Protein of unknown function (DUF796) PF05638 IPR008514
DUF797 Protein of unknown function (DUF797) PF05639 IPR008515
DUF799 Putative bacterial lipoprotein (DUF799) PF05643 IPR008517
DUF800 Protein of unknown function (DUF800) PF05644 IPR008518
DUF801 C. elegans protein of unknown function (DUF801) PF05647
DUF802 Domain of unknown function (DUF802) PF05650 IPR008520
DUF803 Protein of unknown function (DUF803) PF05653 IPR008521
DUF805 Protein of unknown function (DUF805) PF05656 IPR008523
DUF806 Protein of unknown function (DUF806) PF05657 IPR008524
DUF807 Coxiella burnetii protein of unknown function (DUF807) PF05660 IPR008525
DUF808 Protein of unknown function (DUF808) PF05661 IPR008526
DUF809 Protein of unknown function (DUF809) PF05663 IPR008527
DUF81 Domain of unknown function DUF81 PF01925 IPR002781
DUF810 Protein of unknown function (DUF810) PF05664 IPR008528
DUF811 Domain of unknown function (DUF811) PF05665 IPR008529
DUF812 Protein of unknown function (DUF812) PF05667 IPR008530
DUF814 Domain of unknown function (DUF814) PF05670 IPR008532
DUF815 Protein of unknown function (DUF815) PF05673 IPR008533
DUF816 Baculovirus protein of unknown function (DUF816) PF05674 IPR008534
DUF817 Protein of unknown function (DUF817) PF05675 IPR008535
DUF818 Chlamydia CHLPS protein (DUF818) PF05677 IPR008536
DUF819 Protein of unknown function (DUF819) PF05684 IPR008537
DUF82 Protein of unknown function DUF82 PF01927 IPR002782
DUF820 Protein of unknown function (DUF820) PF05685 IPR008538
DUF821 Arabidopsis thaliana protein of unknown function (DUF821) PF05686 IPR006598
DUF822 Plant protein of unknown function (DUF822) PF05687 IPR008540
DUF823 Salmonella repeat of unknown function (DUF823) PF05689 IPR008541
DUF824 Salmonella repeat of unknown function (DUF824) PF05688 IPR008542
DUF825 Plant protein of unknown function (DUF825) PF05695 IPR008543
DUF826 Protein of unknown function (DUF826) PF05696 IPR008544
DUF827 Plant protein of unknown function (DUF827) PF05701 IPR008545
DUF828 Plant protein of unknown function (DUF828) PF05703 IPR008546
DUF829 Eukaryotic protein of unknown function (DUF829) PF05705 IPR008547
DUF83 Domain of unknown function DUF83 PF01930
DUF830 Orthopoxvirus protein of unknown function (DUF830) PF05708
DUF832 Herpesvirus protein of unknown function (DUF832) PF05734 IPR008550
DUF833 Protein of unknown function (DUF833) PF05742 IPR008551
DUF834 Domain of unknown function (DUF834) PF05754 IPR008552
DUF835 Protein of unknown function (DUF835) PF05763 IPR008553
DUF836 Glutaredoxin-like domain (DUF836) PF05768 IPR008554
DUF837 Protein of unknown function (DUF837) PF05769 IPR008555
DUF839 Bacterial protein of unknown function (DUF839) PF05787 IPR008557
DUF84 Protein of unknown function DUF84 PF01931 IPR002786
DUF840 Lagovirus protein of unknown function (DUF840) PF05801 IPR008558
DUF841 Eukaryotic protein of unknown function (DUF841) PF05809
DUF842 Eukaryotic protein of unknown function (DUF842) PF05811 IPR008560
DUF843 Baculovirus protein of unknown function (DUF843) PF05814 IPR008561
DUF844 Baculovirus protein of unknown function (DUF844) PF05815 IPR008562
DUF845 Baculovirus protein of unknown function (DUF845) PF05820 IPR008563
DUF846 Eukaryotic protein of unknown function (DUF846) PF05832 IPR008564
DUF847 Predicted lysozyme (DUF847) PF05838 IPR008565
DUF848 Gammaherpesvirus protein of unknown function (DUF848) PF05852 IPR008566
DUF849 Prokaryotic protein of unknown function (DUF849) PF05853 IPR008567
DUF850 Eukaryotic protein of unknown function (DUF850) PF05863
DUF851 Caenorhabditis elegans repeat of unknown function (DUF851) PF05867
DUF853 Bacterial protein of unknown function (DUF853) PF05872 IPR008571
DUF856 Caenorhabditis elegans protein of unknown function (DUF856) PF05884 IPR008574
DUF858 Eukaryotic protein of unknown function (DUF858) PF05891 IPR008576
DUF859 Siphovirus protein of unknown function (DUF859) PF05895 IPR008577
DUF86 Protein of unknown function DUF86 PF01934 IPR008201
DUF862 PPPDE putative peptidase domain PF05903 IPR008580
DUF863 Plant protein of unknown function (DUF863) PF05904 IPR008581
DUF865 Herpesvirus-7 repeat of unknown function (DUF865) PF05906
DUF866 Eukaryotic protein of unknown function (DUF866) PF05907 IPR008584
DUF867 Protein of unknown function (DUF867) PF05908 IPR008585
DUF868 Plant protein of unknown function (DUF868) PF05910 IPR008586
DUF869 Plant protein of unknown function (DUF869) PF05911 IPR008587
DUF87 Domain of unknown function DUF87 PF01935 IPR002789
DUF870 Caenorhabditis elegans protein of unknown function (DUF870) PF05912 IPR008588
DUF871 Bacterial protein of unknown function (DUF871) PF05913 IPR008589
DUF872 Eukaryotic protein of unknown function (DUF872) PF05915 IPR008590
DUF874 Helicobacter pylori protein of unknown function (DUF874) PF05917 IPR008592
DUF876 Bacterial protein of unknown function (DUF876) PF05936 IPR010263
DUF877 Protein of unknown function (DUF877) PF05943 IPR010269
DUF879 Bacterial protein of unknown function (DUF879) PF05947 IPR010272
DUF88 Protein of unknown function DUF88 PF01936
DUF881 Bacterial protein of unknown function (DUF881) PF05949 IPR010273
DUF883 Bacterial protein of unknown function (DUF883) PF05957 IPR010279
DUF884 Nucleopolyhedrovirus protein of unknown function (DUF884) PF05959 IPR009235
DUF885 Bacterial protein of unknown function (DUF885) PF05960 IPR010281
DUF888 Protein of unknown function (DUF888) PF05969 IPR010284
DUF889 Eukaryotic protein of unknown function (DUF889) PF05970 IPR010285
DUF89 Protein of unknown function DUF89 PF01937 IPR002791
DUF892 Protein of unknown function (DUF892) PF05974 IPR010287
DUF893 Bacterial membrane protein of unknown function (DUF893) PF05976
DUF894 Bacterial protein of unknown function (DUF894) PF05977 IPR010290
DUF895 Eukaryotic protein of unknown function (DUF895) PF05978
DUF896 Bacterial protein of unknown function (DUF896) PF05979 IPR009242
DUF897 Domain of unknown function (DUF897) PF05982 IPR010293
DUF898 Bacterial protein of unknown function (DUF898) PF05987 IPR010295
DUF899 Bacterial protein of unknown function (DUF899) PF05988 IPR010296
DUF900 Alpha/beta hydrolase of unknown function (DUF900) PF05990 IPR010297
DUF901 Protein of unknown function (DUF901) PF05991 IPR010298
DUF902 Domain of Unknown Function (DUF902) PF06001 IPR010303
DUF903 Bacterial protein of unknown function (DUF903) PF06004 IPR010305
DUF904 Protein of unknown function (DUF904) PF06005 IPR009252
DUF905 Bacterial protein of unknown function (DUF905) PF06006 IPR009253
DUF906 Domain of Unknown Function (DUF906) PF06010
DUF908 Domain of Unknown Function (DUF908) PF06012 IPR010309
DUF91 Protein of unknown function DUF91 PF01939 IPR002793
DUF910 Bacterial protein of unknown function (DUF910) PF06014 IPR009256
DUF911 Archaeal protein of unknown function (DUF911) PF06023 IPR009260
DUF912 Nucleopolyhedrovirus protein of unknown function (DUF912) PF06024 IPR009261
DUF913 Domain of Unknown Function (DUF913) PF06025 IPR010314
DUF914 Eukaryotic protein of unknown function (DUF914) PF06027
DUF915 Alpha/beta hydrolase of unknown function (DUF915) PF06028 IPR010315
DUF916 Bacterial protein of unknown function (DUF916) PF06030 IPR010317
DUF917 Protein of unknown function (DUF917) PF06032 IPR010318
DUF918 Nucleopolyhedrovirus protein of unknown function (DUF918) PF06033 IPR009264
DUF919 Nucleopolyhedrovirus protein of unknown function (DUF919) PF06034 IPR009265
DUF92 Integral membrane protein DUF92 PF01940 IPR002794
DUF920 Bacterial protein of unknown function (DUF920) PF06035 IPR010319
DUF922 Bacterial protein of unknown function (DUF922) PF06037 IPR010321
DUF924 Bacterial protein of unknown function (DUF924) PF06041 IPR010323
DUF925 Bacterial protein of unknown function (DUF925) PF06042 IPR009267
DUF926 Domain of Unknown Function (DUF926) PF06047 IPR009269
DUF927 Domain of unknown function (DUF927) PF06048 IPR009270
DUF928 Domain of Unknown Function (DUF928) PF06051 IPR010328
DUF929 Domain of unknown function (DUF929) PF06053 IPR009272
DUF930 Domain of Unknown Function (DUF930) PF06059 IPR009273
DUF932 Domain of unknown function (DUF932) PF06067 IPR009276
DUF934 Bacterial protein of unknown function (DUF934) PF06073 IPR008318
DUF935 Protein of unknown function (DUF935) PF06074 IPR009279
DUF936 Plant protein of unknown function (DUF936) PF06075 IPR010341
DUF937 Bacterial protein of unknown function (DUF937) PF06078 IPR009282
DUF938 Protein of unknown function (DUF938) PF06080 IPR010342
DUF939 Bacterial protein of unknown function (DUF939) PF06081 IPR010343
DUF940 Bacterial putative lipoprotein (DUF940) PF06082 IPR010344
DUF943 Enterobacterial putative membrane protein (DUF943) PF06092 IPR010351
DUF945 Bacterial protein of unknown function (DUF945) PF06097 IPR010352
DUF946 Plant protein of unknown function (DUF946) PF06101 IPR009291
DUF947 Domain of unknown function (DUF947) PF06102 IPR009292
DUF948 Bacterial protein of unknown function (DUF948) PF06103 IPR009293
DUF95 Integral membrane protein DUF95 PF01944 IPR002798
DUF950 Staphylococcus protein of unknown function (DUF950) PF06106 IPR009295
DUF951 Bacterial protein of unknown function (DUF951) PF06107 IPR009296
DUF952 Protein of unknown function (DUF952) PF06108 IPR009297
DUF953 Eukaryotic protein of unknown function (DUF953) PF06110 IPR010357
DUF955 Domain of unknown function (DUF955) PF06114 IPR010359
DUF956 Domain of unknown function (DUF956) PF06115 IPR010360
DUF957 Enterobacterial protein of unknown function (DUF957) PF06117 IPR009301
DUF959 Domain of Unknown Function (DUF959) PF06121 IPR010363
DUF960 Staphylococcal protein of unknown function (DUF960) PF06124 IPR009303
DUF961 Bacterial protein of unknown function (DUF961) PF06125 IPR010365
DUF962 Protein of unknown function (DUF962) PF06127 IPR009305
DUF963 Schizosaccharomyces pombe repeat of unknown function (DUF963) PF06131 IPR009306
DUF964 Protein of unknown function (DUF964) PF06133 IPR010368
DUF965 Bacterial protein of unknown function (DUF965) PF06135 IPR009309
DUF966 Domain of unknown function (DUF966) PF06136 IPR010369
DUF968 Protein of unknown function (DUF968) PF06147 IPR010373
DUF969 Protein of unknown function (DUF969) PF06149 IPR010374
DUF970 Protein of unknown function (DUF970) PF06153 IPR010375
DUF971 Protein of unknown function (DUF971) PF06155 IPR010376
DUF972 Protein of unknown function (DUF972) PF06156 IPR010377
DUF973 Protein of unknown function (DUF973) PF06157 IPR009321
DUF974 Protein of unknown function (DUF974) PF06159 IPR010378
DUF975 Protein of unknown function (DUF975) PF06161 IPR010380
DUF976 Caenorhabditis elegans protein of unknown function (DUF976) PF06162 IPR010381
DUF977 Bacterial protein of unknown function (DUF977) PF06163 IPR010382
DUF979 Protein of unknown function (DUF979) PF06166 IPR009323
DUF98 Protein of unknown function DUF98 PF01947 IPR002800
DUF980 Protein of unknown function (DUF980) PF06167 IPR010384
DUF981 Protein of unknown function (DUF981) PF06168 IPR009324
DUF982 Protein of unknown function (DUF982) PF06169 IPR010385
DUF983 Protein of unknown function (DUF983) PF06170 IPR009325
DUF986 Protein of unknown function (DUF986) PF06173 IPR009328
DUF987 Protein of unknown function (DUF987) PF06174 IPR009329
DUF989 Protein of unknown function (DUF989) PF06181 IPR010389
DUF99 Protein of unknown function DUF99 PF01949 IPR002802
DUF990 Protein of unknown function (DUF990) PF06182 IPR010390
DUF992 Protein of unknown function (DUF992) PF06186 IPR009333
DUF993 Protein of unknown function (DUF993) PF06187 IPR009334
DUF995 Protein of unknown function (DUF995) PF06191 IPR009337
DUF996 Protein of unknown function (DUF996) PF06195 IPR010397
DUF997 Protein of unknown function (DUF997) PF06196 IPR010398
DUF998 Protein of unknown function (DUF998) PF06197 IPR009339
DUF999 Protein of unknown function (DUF999) PF06198 IPR009340
Duffy_binding Duffy binding domain PF05424 IPR008602
DuoxA Dual oxidase maturation factor PF10204 IPR018469
DUP DUP family PF00674 IPR001142
Dus Dihydrouridine synthase (Dus) PF01207 IPR001269
dUTPase dUTPase PF00692 IPR008180
dUTPase_2 dUTPase PF08761 IPR014871
DVL DVL family PF08137 IPR012552
DWNN DWNN domain PF08783 IPR014891
DX DX module PF01666 IPR002593
DXP_redisom_C 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal PF08436 IPR013644
DXP_reductoisom 1-deoxy-D-xylulose 5-phosphate reductoisomerase PF02670 IPR013512
Dymeclin Dyggve-Melchior-Clausen syndrome protein PF09742 IPR019142
Dynactin_p22 Dynactin subunit p22 PF07426 IPR009991
Dynactin_p62 Dynactin p62 family PF05502 IPR008603
Dynamin_M Dynamin central region PF01031 IPR000375
Dynamin_N Dynamin family PF00350 IPR001401
Dynamitin Dynamitin PF04912 IPR006996
Dynein_heavy Dynein heavy chain PF03028 IPR004273
Dynein_light Dynein light chain type 1 PF01221 IPR001372
Dyp_perox Dyp-type peroxidase family PF04261 IPR006314
Dysbindin Dysbindin (Dystrobrevin binding protein 1) PF04440 IPR007531
DZC Disease resistance/zinc finger/chromosome condensation-like region PF08381 IPR013591
DZF DZF PF07528 IPR006561
E1-E2_ATPase E1-E2 ATPase PF00122 IPR008250
E1_DerP2_DerF2 ML domain PF02221 IPR003172
E1_dh Dehydrogenase E1 component PF00676 IPR001017
E2 Bacteriophage E2-like protein PF08199 IPR013184
E2F_TDP E2F/DP family winged-helix DNA-binding domain PF02319 IPR003316
E2_bind E2 binding domain PF08825 IPR014929
E3_binding e3 binding domain PF02817 IPR004167
E6 Early Protein (E6) PF00518 IPR001334
E7 E7 protein, Early protein PF00527 IPR000148
EAF ELL-associated factor PF09816 IPR019194
EAL EAL domain PF00563 IPR001633
EAP30 EAP30/Vps36 family PF04157 IPR007286
Eapp_C E2F-associated phosphoprotein PF10238 IPR019370
EAV_GS Equine arteritis virus small envelope glycoprotein PF01309 IPR001913
EB EB module PF01683 IPR006149
EB1 EB1-like C-terminal motif PF03271 IPR004953
EB1_binding EB-1 Binding Domain PF05937 IPR009232
Ebola_NP Ebola nucleoprotein PF05505 IPR008609
EBP Emopamil binding protein PF05241 IPR007905
Ebp2 Eukaryotic rRNA processing protein EBP2 PF05890 IPR008610
EBP50_C-term EBP50, C-terminal PF09007 IPR015098
EBV-NA1 Epstein Barr virus nuclear antigen-1, DNA-binding domain PF02905 IPR004186
EBV-NA3 Epstein-Barr virus nuclear antigen 3 (EBNA-3) PF05009 IPR007706
EB_dh Ethylbenzene dehydrogenase PF09459 IPR019020
ECH Enoyl-CoA hydratase/isomerase family PF00378 IPR001753
Eclosion Eclosion hormone PF04736 IPR006825
ECM1 Extracellular matrix protein 1 (ECM1) PF05782 IPR008605
Eco57I Eco57I restriction endonuclease PF07669
EcoEI_R_C EcoEI R protein C-terminal PF08463 IPR013670
EcoRI Restriction endonuclease EcoRI PF02963 IPR004221
EcoRII-C EcoRII C terminal PF09019 IPR015109
EcoRII-N Restriction endonuclease EcoRII, N-terminal PF09217 IPR015300
Ecotin Ecotin PF03974 IPR005658
EcsB Bacterial ABC transporter protein EcsB PF05975 IPR010288
ECSIT ECSIT (evolutionarily conserved signaling intermediate in Toll pathways) PF06239 IPR010418
Ectatomin Ectatomin PF06457 IPR009458
ecTbetaR2 Transforming growth factor beta receptor 2 ectodomain PF08917 IPR015013
Ectoine_synth Ectoine synthase PF06339 IPR010462
Eeig1 Oestrogen-responsive protein Fam102A-B PF10358 IPR019448
EF-1_beta_acid Eukaryotic elongation factor 1 beta central acidic region PF10587 IPR018940
EF1G Elongation factor 1 gamma, conserved domain PF00647 IPR001662
EF1_GNE EF-1 guanine nucleotide exchange domain PF00736 IPR014038
EFG_C Elongation factor G C-terminus PF00679 IPR000640
EFG_IV Elongation factor G, domain IV PF03764 IPR005517
efhand EF hand PF00036 IPR018248
efhand_1 EF hand PF09068 IPR015153
efhand_2 EF-hand PF09069 IPR015154
efhand_Ca_insen Ca2+ insensitive EF hand PF08726 IPR014837
efhand_like Phosphoinositide-specific phospholipase C, efhand-like PF09279 IPR015359
EFP Elongation factor P (EF-P) OB domain PF01132 IPR001059
EFP_N Elongation factor P (EF-P) KOW-like domain PF08207 IPR013185
EF_assoc_1 EF hand associated PF08355 IPR013566
EF_assoc_2 EF hand associated PF08356 IPR013567
EF_TS Elongation factor TS PF00889 IPR014039
EGF EGF-like domain PF00008 IPR006209
EGF_2 EGF-like domain PF07974 IPR013111
EGF_alliinase Alliinase EGF-like domain PF04863 IPR006947
EGF_CA Calcium binding EGF domain PF07645 IPR013091
Egg_lysin Egg lysin (Sperm-lysin) PF01303 IPR001379
Ehbp Energy-converting hydrogenase B subunit P (EhbP) PF10622 IPR019597
EHN Epoxide hydrolase N terminus PF06441 IPR010497
Ehrlichia_rpt Ehrlichia tandem repeat (Ehrlichia_rpt) PF09528 IPR019048
EI24 Etoposide-induced protein 2.4 (EI24) PF07264 IPR009890
EIAV_GP45 EIAV glycoprotein, gp45 PF01045
EIAV_GP90 EIAV coat protein, gp90 PF00971 IPR001361
eIF-1a Translation initiation factor 1A / IF-1 PF01176 IPR006196
eIF-3c_N Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF3c_N) PF05470 IPR008905
eIF-3_zeta Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) PF05091 IPR007783
eIF-4B Plant specific eukaryotic initiation factor 4B PF06273 IPR010433
eIF-5a Eukaryotic initiation factor 5A hypusine, DNA-binding OB fold PF01287 IPR020189
eIF-5_eIF-2B Domain found in IF2B/IF5 PF01873 IPR002735
eIF-6 eIF-6 family PF01912 IPR002769
eIF2A Eukaryotic translation initiation factor eIF2A PF08662 IPR013979
eIF2_C Initiation factor eIF2 gamma, C terminal PF09173 IPR015256
eIF3_N eIF3 subunit 6 N terminal domain PF09440 IPR019010
eIF3_subunit Translation initiation factor eIF3 subunit PF08597 IPR013906
EIF4E-T Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E PF10477 IPR018862
EIF_2_alpha Eukaryotic translation initiation factor 2 alpha subunit PF07541 IPR011488
eIF_4EBP Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) PF05456 IPR008606
EII-GUT PTS system enzyme II sorbitol-specific factor PF03608 IPR004699
EII-Sor PTS system sorbose-specific iic component PF03609 IPR004700
EIIA-man PTS system fructose IIA component PF03610 IPR004701
EIIBC-GUT_C Sorbitol phosphotransferase enzyme II C-terminus PF07663 IPR011638
EIIBC-GUT_N Sorbitol phosphotransferase enzyme II N-terminus PF03612 IPR011618
EIIC-GAT PTS system Galactitol-specific IIC component PF03611 IPR004703
EIID-AGA PTS system mannose/fructose/sorbose family IID component PF03613 IPR004704
EIN3 Ethylene insensitive 3 PF04873 IPR006957
EKR Domain of unknown function PF10371 IPR019456
ELF ELF protein PF03317 IPR004990
Elf1 Transcription elongation factor Elf1 like PF05129 IPR007808
ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PF00208 IPR006096
ELFV_dehydrog_N Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PF02812 IPR006097
ELH Egg-laying hormone precursor PF02323 IPR003424
Elicitin Elicitin PF00964 IPR002200
ELK ELK domain PF03789 IPR005539
ELL RNA polymerase II elongation factor ELL PF10390 IPR019464
ELM2 ELM2 domain PF01448 IPR000949
ELMO_CED12 ELMO/CED-12 family PF04727 IPR006816
ELO GNS1/SUR4 family PF01151 IPR002076
Elong-fact-P_C Elongation factor P, C-terminal PF09285 IPR015365
Elongin_A RNA polymerase II transcription factor SIII (Elongin) subunit A PF06881 IPR010684
EMA Merozoite Antigen PF02488 IPR003407
EMG1 EMG1/NEP1 methyltransferase PF03587 IPR005304
EMI EMI domain PF07546 IPR011489
EMP24_GP25L emp24/gp25L/p24 family/GOLD PF01105 IPR000348
EMP70 Endomembrane protein 70 PF02990 IPR004240
EndIII_4Fe-2S Iron-sulfur binding domain of endonuclease III PF10576 IPR003651
Endomucin Endomucin PF07010 IPR010740
Endonuc-BglII Restriction endonuclease BglII PF09195 IPR015278
Endonuc-BsobI Restriction endonuclease BsobI PF09194 IPR015277
Endonuc-dimeris T4 recombination endonuclease VII, dimerisation PF09124 IPR015208
Endonuc-EcoRV Restriction endonuclease EcoRV PF09233 IPR015314
Endonuc-FokI_C Restriction endonuclease FokI, C terminal PF09254 IPR015334
Endonuc-HincII Restriction endonuclease HincII PF09226 IPR015307
Endonuc-MspI Restriction endonuclease MspI PF09208 IPR015291
Endonuc-PvuII Restriction endonuclease PvuII PF09225 IPR015306
Endonuclease_1 Endonuclease I PF04231 IPR007346
Endonuclease_5 Endonuclease V PF04493 IPR007581
Endonuclease_7 Recombination endonuclease VII PF02945 IPR004211
Endonuclease_NS DNA/RNA non-specific endonuclease PF01223 IPR001604
Endonuc_Holl Endonuclease related to archaeal Holliday junction resolvase PF10107 IPR019287
Endonuc_subdom PI-PfuI Endonuclease subdomain PF09062 IPR015147
Endostatin Collagenase NC10 and Endostatin PF06482 IPR010515
Endosulfine cAMP-regulated phosphoprotein/endosulfine conserved region PF04667 IPR006760
Endothelin Endothelin family PF00322 IPR001928
Endotoxin_C delta endotoxin PF03944 IPR005638
Endotoxin_M delta endotoxin PF00555 IPR015790
Endotoxin_mid Bacillus thuringiensis delta-Endotoxin, middle domain PF09131 IPR015214
Endotoxin_N delta endotoxin, N-terminal domain PF03945 IPR005639
Engrail_1_C_sig Engrailed homeobox C-terminal signature domain PF10525 IPR019549
Enhancin Viral enhancin protein PF03272 IPR004954
ENOD40 ENOD40 protein PF08247 IPR013186
ENOD93 Early nodulin 93 ENOD93 protein PF03386 IPR005050
Enolase_C Enolase, C-terminal TIM barrel domain PF00113 IPR020810
Enolase_N Enolase, N-terminal domain PF03952 IPR020811
ENT ENT domain PF03735 IPR005491
EntA_Immun Enterocin A Immunity PF08951 IPR015046
Entericidin Entericidin EcnA/B family PF08085 IPR012556
Enterotoxin_a Heat-labile enterotoxin alpha chain PF01375 IPR001144
Enterotoxin_b Heat-labile enterotoxin beta chain PF01376 IPR001835
Enterotoxin_HS1 Heat stable E.coli enterotoxin 1 PF08090 IPR012557
Enterotoxin_ST Heat-stable enterotoxin ST PF02048 IPR001489
ENTH ENTH domain PF01417 IPR001026
Env-gp36 Env-gp36 lentivirus glycoprotein PF09590 IPR018582
EnY2 Transcription factor e(y)2 PF10163 IPR018783
Ependymin Ependymin PF00811 IPR001299
Ephrin Ephrin PF00812 IPR001799
Ephrin_lbd Ephrin receptor ligand binding domain PF01404 IPR001090
Epimerase NAD dependent epimerase/dehydratase family PF01370 IPR001509
Epimerase_2 UDP-N-acetylglucosamine 2-epimerase PF02350 IPR003331
EPL1 Enhancer of polycomb-like PF10513 IPR019542
EpoR_lig-bind Erythropoietin receptor, ligand binding PF09067 IPR015152
EPO_TPO Erythropoietin/thrombopoietin PF00758 IPR001323
EppA_BapA Exported protein precursor (EppA/BapA) PF07268 IPR009894
Epsilon_antitox Bacterial epsilon antitoxin PF08998 IPR015090
EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PF00275 IPR001986
EPTP EPTP domain PF03736 IPR005492
EPV_E5 Major transforming protein E5 family PF08135 IPR012555
Equine_IAV_S2 Equine infectious anaemia virus S2 protein PF06502 IPR009480
ER Enhancer of rudimentary PF01133 IPR000781
ERCC4 ERCC4 domain PF02732 IPR006166
ERF ERF superfamily PF04404 IPR007499
eRF1_1 eRF1 domain 1 PF03463 IPR005140
eRF1_2 eRF1 domain 2 PF03464 IPR005141
eRF1_3 eRF1 domain 3 PF03465 IPR005142
Erf4 Golgin subfamily A member 7/ERF4 family PF10256 IPR019383
Erg28 Erg28 like protein PF03694 IPR005352
ERG2_Sigma1R ERG2 and Sigma1 receptor like protein PF04622 IPR006716
ERG4_ERG24 Ergosterol biosynthesis ERG4/ERG24 family PF01222 IPR001171
ERM Ezrin/radixin/moesin family PF00769 IPR011259
ErmC 23S rRNA methylase leader peptide (ErmC) PF06308 IPR009391
ERO1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) PF04137 IPR007266
ERp29 Endoplasmic reticulum protein ERp29, C-terminal domain PF07749 IPR011679
ERp29_N ERp29, N-terminal domain PF07912 IPR012883
Erp_C Erp protein C-terminus PF06780 IPR009618
Erv26 Transmembrane adaptor Erv26 PF04148 IPR007277
Erythro-docking Erythronolide synthase, docking PF09277 IPR015357
Erythrovirus_X Erythrovirus X protein PF06795 IPR009629
Erythro_esteras Erythromycin esterase PF05139 IPR007815
Ery_res_leader1 Erythromycin resistance leader peptide PF08051 IPR012558
Ery_res_leader2 Erythromycin resistance leader peptide PF08057 IPR012559
ER_lumen_recept ER lumen protein retaining receptor PF00810 IPR000133
Es2 Nuclear protein Es2 PF09751 IPR019148
ESAG1 ESAG protein PF03238 IPR004922
ESCRT-II ESCRT-II complex subunit PF05871 IPR008570
EspA EspA-like secreted protein PF03433 IPR005095
EspB Enterobacterial EspB protein PF05802
EspF EspF protein repeat PF04806 IPR006891
EspG EspG protein PF06872 IPR009669
EssA Firmicute eSAT-6 protein secretion system EssA PF10661 IPR018920
essB Predicted membrane protein essB PF10140 IPR018778
ESSS ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) PF10183 IPR019329
EST1 Telomerase activating protein Est1 PF10374 IPR019458
EST1_DNA_bind Est1 DNA/RNA binding domain PF10373 IPR018834
Est3 Telomerase holoenzyme, Est3 subunit PF10341 IPR019437
Esterase Putative esterase PF00756 IPR000801
Esterase_phd Esterase PHB depolymerase PF10503
EsxB Virulence factor EsxB PF10663 IPR018921
ET ET module PF01684 IPR002603
ETC_C1_NDUFA4 ETC complex I subunit conserved region PF04800 IPR006885
ETC_C1_NDUFA5 ETC complex I subunit conserved region PF04716 IPR006806
ETF Electron transfer flavoprotein domain PF01012 IPR014730
ETF_alpha Electron transfer flavoprotein FAD-binding domain PF00766 IPR014731
ETF_QO Electron transfer flavoprotein-ubiquinone oxidoreductase PF05187 IPR007859
EthD EthD protein PF07110 IPR009799
Etmic-2 Microneme protein Etmic-2 PF06670 IPR009556
ETRAMP Malarial early transcribed membrane protein (ETRAMP) PF09716 IPR006389
Ets Ets-domain PF00178 IPR000418
ETS_PEA3_N PEA3 subfamily ETS-domain transcription factor N terminal domain PF04621 IPR006715
ETX_MTX2 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 PF03318
Euplotes_phero Euplotes octocarinatus mating pheromone protein PF05842 IPR008612
EURL EURL protein PF06937 IPR009704
EutA Ethanolamine utilisation protein EutA PF06277 IPR009377
EutB Ethanolamine ammonia lyase large subunit (EutB) PF06751 IPR010628
EutC Ethanolamine ammonia-lyase light chain (EutC) PF05985 IPR009246
EutH Ethanolamine utilisation protein, EutH PF04346 IPR007441
EutN_CcmL Ethanolamine utilisation protein EutN/carboxysome structural protein Ccml PF03319 IPR004992
EutQ Ethanolamine utilisation protein EutQ PF06249 IPR010424
EVI2A Ectropic viral integration site 2A protein (EVI2A) PF05399 IPR008608
Evr1_Alr Erv1 / Alr family PF04777 IPR006863
ExbD Biopolymer transport protein ExbD/TolR PF02472 IPR003400
Exc Excisionase-like protein PF07825 IPR012884
Excalibur Excalibur calcium-binding domain PF05901 IPR008613
Exo70 Exo70 exocyst complex subunit PF03081 IPR004140
ExoD Exopolysaccharide synthesis, ExoD PF06055 IPR010331
Exonuc_VIII Enterobacterial exodeoxyribonuclease VIII PF06630 IPR010584
Exonuc_VII_L Exonuclease VII, large subunit PF02601 IPR020579
Exonuc_VII_S Exonuclease VII small subunit PF02609 IPR003761
Exonuc_V_gamma Exodeoxyribonuclease V, gamma subunit PF04257
Exonuc_X-T Exonuclease PF00929 IPR013520
Exonuc_X-T_C Exonuclease C-terminal PF08411 IPR013620
Exon_PolB Predicted 3'-5' exonuclease related to the exonuclease domain of PolB PF10108 IPR019288
EXOSC1 Exosome component EXOSC1/CSL4 PF10447 IPR019495
Exosortase_EpsH Transmembrane exosortase (Exosortase_EpsH) PF09721 IPR019127
Exostosin Exostosin family PF03016 IPR004263
Exotox-A_bind Exotoxin A binding PF09101 IPR015185
Exotox-A_cataly Exotoxin A catalytic PF09009 IPR015099
Exotox-A_target Exotoxin A, targeting PF09102 IPR015186
ExoV ExoV-like protein PF08871
Exo_endo_phos Endonuclease/Exonuclease/phosphatase family PF03372 IPR005135
EXS EXS family PF03124 IPR004342
ExsB ExsB PF06508 IPR018317
Extensin-like_C Extensin-like protein C-terminus PF06904 IPR009683
Extensin_1 Extensin-like protein repeat PF02095 IPR003883
Extensin_2 Extensin-like region PF04554 IPR006706
EzrA Septation ring formation regulator, EzrA PF06160 IPR010379
E_Pc_C Enhancer of Polycomb C-terminus PF06752 IPR009607
E_raikovi_mat Euplotes raikovi mating pheromone PF06360 IPR009064
F-112 F-112 protein PF09645 IPR018601
F-actin_cap_A F-actin capping protein alpha subunit PF01267 IPR018315
F-box F-box domain PF00646 IPR001810
F-protein Negative factor, (F-Protein) or Nef PF00469 IPR001558
F1F0-ATPsyn_F Mitochondrial F1-F0 ATP synthase subunit F of fungi PF10791 IPR019727
F420_ligase F420-0:Gamma-glutamyl ligase PF01996 IPR002847
F420_oxidored NADP oxidoreductase coenzyme F420-dependent PF03807 IPR004455
F5_F8_type_C F5/8 type C domain PF00754 IPR000421
FA FERM adjacent (FA) PF08736 IPR014847
FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase family PF01557 IPR002529
FabA FabA-like domain PF07977 IPR013114
FAD-oxidase_C FAD linked oxidases, C-terminal domain PF02913 IPR004113
FadA Adhesion protein FadA PF09403 IPR018543
FadR_C FadR C-terminal domain PF07840 IPR008920
FAD_binding_1 FAD binding domain PF00667 IPR003097
FAD_binding_2 FAD binding domain PF00890 IPR003953
FAD_binding_3 FAD binding domain PF01494 IPR002938
FAD_binding_4 FAD binding domain PF01565 IPR006094
FAD_binding_5 FAD binding domain in molybdopterin dehydrogenase PF00941 IPR002346
FAD_binding_6 Oxidoreductase FAD-binding domain PF00970 IPR008333
FAD_binding_7 FAD binding domain of DNA photolyase PF03441 IPR005101
FAD_binding_8 FAD-binding domain PF08022 IPR013112
FAD_binding_9 Siderophore-interacting FAD-binding domain PF08021 IPR013113
FAD_syn FAD synthetase PF06574 IPR015864
Fae Formaldehyde-activating enzyme (Fae) PF08714 IPR014826
FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein PF08392 IPR013601
FaeA FaeA-like protein PF04703
FAE_3-kCoA_syn1 Fatty acid elongase 3-ketoacyl-CoA synthase 1 PF07168
FAIM1 Fas apoptotic inhibitory molecule (FAIM1) PF06905 IPR010695
FAINT Domain of unknown function, DUF529 PF04385 IPR007480
Fanconi_A Fanconi anaemia group A protein PF03511 IPR003516
Fanconi_C Fanconi anaemia group C protein PF02106 IPR000686
FAP Fibronectin-attachment protein (FAP) PF07174 IPR010801
Fapy_DNA_glyco Formamidopyrimidine-DNA glycosylase N-terminal domain PF01149 IPR012319
Far-17a_AIG1 FAR-17a/AIG1-like protein PF04750 IPR006838
FAR1 FAR1 DNA-binding domain PF03101 IPR004330
FARP FMRFamide related peptide family PF01581 IPR002544
Fasciclin Fasciclin domain PF02469 IPR000782
Fascin Fascin domain PF06268
FAST_1 FAST kinase-like protein, subdomain 1 PF06743 IPR010622
FAST_2 FAST kinase-like protein, subdomain 2 PF08368 IPR013579
FAT FAT domain PF02259 IPR003151
FATC FATC domain PF02260 IPR003152
FA_desaturase Fatty acid desaturase PF00487 IPR005804
FA_desaturase_2 Fatty acid desaturase PF03405 IPR005067
FA_hydroxylase Fatty acid hydroxylase superfamily PF04116 IPR006694
FA_synthesis Fatty acid synthesis protein PF02504 IPR003664
FBA F-box associated region PF04300 IPR007397
FBA_1 F-box associated PF07734 IPR006527
FBA_2 F-box associated PF07735 IPR012885
FBA_3 F-box associated PF08268 IPR013187
FBD FBD PF08387 IPR013596
FBP Fibronectin-binding protein (FBP) PF07299 IPR010841
FbpA Fibronectin-binding protein A N-terminus (FbpA) PF05833 IPR008616
FBPase Fructose-1-6-bisphosphatase PF00316 IPR000146
FBPase_2 Firmicute fructose-1,6-bisphosphatase PF06874 IPR009164
FBPase_3 Fructose-1,6-bisphosphatase PF01950 IPR002803
FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded PF03320 IPR004464
FB_lectin Fungal fruit body lectin PF07367 IPR009960
Fb_signal Fibronectin-binding protein signal sequence PF08341 IPR013552
FCD FCD domain PF07729 IPR011711
Fcf1 Fcf1 PF04900 IPR006984
Fcf2 Fcf2 pre-rRNA processing PF08698 IPR014810
FCH Fes/CIP4 homology domain PF00611 IPR001060
FCP1_C FCP1, C-terminal PF09309 IPR015388
FCSD-flav_bind Flavocytochrome c sulphide dehydrogenase, flavin-binding PF09242 IPR015323
FdhD-NarQ FdhD/NarQ family PF02634 IPR003786
FdhE Protein involved in formate dehydrogenase formation PF04216 IPR006452
FdrA Bacterial FdrA protein PF06263
FdtA WxcM-like, C-terminal PF05523 IPR008894
FDX-ACB Ferredoxin-fold anticodon binding domain PF03147 IPR005121
Fe-ADH Iron-containing alcohol dehydrogenase PF00465 IPR001670
Fe-S_biosyn Iron-sulphur cluster biosynthesis PF01521 IPR000361
FecCD FecCD transport family PF01032 IPR000522
FecR FecR protein PF04773 IPR006860
Feld-I_B Allergen Fel d I-B chain PF09252 IPR015332
Fels1 Fels-1 Prophage Protein-like PF05666 IPR008617
FemAB FemAB family PF02388 IPR003447
FeoA FeoA domain PF04023 IPR007167
FeoB_C Ferrous iron transport protein B C terminus PF07664 IPR011640
FeoB_N Ferrous iron transport protein B PF02421 IPR011619
FeoC FeoC like transcriptional regulator PF09012 IPR015102
Fer2 2Fe-2S iron-sulfur cluster binding domain PF00111 IPR001041
Fer2_2 [2Fe-2S] binding domain PF01799 IPR002888
Fer2_BFD BFD-like [2Fe-2S] binding domain PF04324 IPR007419
Fer4 4Fe-4S binding domain PF00037 IPR001450
Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family PF00142 IPR000392
FerA FerA (NUC095) domain PF08165 IPR012560
FerB FerB (NUC096) domain PF08150 IPR012561
FerI FerI (NUC094) domain PF08151 IPR012968
FERM_C FERM C-terminal PH-like domain PF09380 IPR018980
FERM_M FERM central domain PF00373 IPR019748
FERM_N FERM N-terminal domain PF09379 IPR018979
Ferric_reduct Ferric reductase like transmembrane component PF01794 IPR013130
Ferritin Ferritin-like domain PF00210 IPR008331
Ferrochelatase Ferrochelatase PF00762 IPR001015
FeS Putative Fe-S cluster PF04060 IPR007202
Fes1 Nucleotide exchange factor Fes1 PF08609 IPR013918
FeThRed_A Ferredoxin thioredoxin reductase variable alpha chain PF02941 IPR004207
FeThRed_B Ferredoxin thioredoxin reductase catalytic beta chain PF02943 IPR004209
FEZ FEZ-like protein PF07763 IPR011680
Fez1 Fez1 PF06818 IPR009638
Fe_bilin_red Ferredoxin-dependent bilin reductase PF05996 IPR009249
Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain PF01325 IPR022687
Fe_dep_repr_C Iron dependent repressor, metal binding and dimerisation domain PF02742 IPR001367
Fe_hyd_lg_C Iron only hydrogenase large subunit, C-terminal domain PF02906 IPR004108
Fe_hyd_SSU Iron hydrogenase small subunit PF02256 IPR003149
FF FF domain PF01846 IPR002713
FFD_TFG FFD and TFG box motifs PF09542 IPR019053
FG-GAP FG-GAP repeat PF01839 IPR013517
FGase N-formylglutamate amidohydrolase PF05013 IPR007709
FGF Fibroblast growth factor PF00167 IPR002348
FGF-BP1 FGF binding protein 1 (FGF-BP1) PF06473 IPR010510
FGGY_C FGGY family of carbohydrate kinases, C-terminal domain PF02782 IPR018485
FGGY_N FGGY family of carbohydrate kinases, N-terminal domain PF00370 IPR018484
FH2 Formin Homology 2 Domain PF02181 IPR015425
FHA FHA domain PF00498 IPR000253
FHIPEP FHIPEP family PF00771 IPR001712
FhuF Ferric iron reductase protein FhuF PF06276
FIBP Acidic fibroblast growth factor binding (FIBP) PF05427 IPR008614
Fibrillarin Fibrillarin PF01269 IPR000692
Fibrillarin_2 Fibrillarin-like archaeal protein PF10113 IPR016760
Fibrinogen_BP Fibrinogen binding protein PF08017 IPR012969
Fibrinogen_C Fibrinogen beta and gamma chains, C-terminal globular domain PF00147 IPR002181
Fibritin_C Fibritin C-terminal region PF07921 IPR012473
Fibroin_P25 Fibroin P25 PF07294 IPR009911
Fib_alpha Fibrinogen alpha chain PF08702 IPR012290
Fib_beta Fibrinogen beta chain N terminal PF09389
Fib_gamma Fibrinogen gamma chain PF09395
Fib_succ_major Fibrobacter succinogenes major domain (Fib_succ_major) PF09603 IPR011871
Fic Fic/DOC family PF02661 IPR003812
Fijivirus_P9-2 Fijivirus P9-2 protein PF06837 IPR009650
Fiji_64_capsid Fijivirus 64 kDa capsid protein PF05880 IPR008618
Filaggrin Filaggrin PF03516 IPR003303
Filament Intermediate filament protein PF00038 IPR016044
Filament_head Intermediate filament head (DNA binding) region PF04732 IPR006821
Filamin Filamin/ABP280 repeat PF00630 IPR017868
Filo_glycop Filovirus glycoprotein PF01611 IPR002561
Filo_VP24 Filovirus membrane-associated protein VP24 PF06389 IPR009433
Filo_VP35 Filoviridae VP35 PF02097 IPR002953
Fil_haemagg Haemagluttinin repeat PF05594 IPR008619
Fim-adh_lectin Fimbrial adhesin F17-AG, lectin domain PF09222 IPR015303
Fimbrial Fimbrial protein PF00419 IPR014779
Fimbrial_CS1 CS1 type fimbrial major subunit PF04449 IPR007540
Fimbrial_K88 Fimbrial, major and minor subunit PF02432 IPR003467
FimH_man-bind FimH, mannose binding PF09160 IPR015243
FimP Fms-interacting protein PF09766 IPR019163
Fip1 Fip1 motif PF05182 IPR007854
FIST FIST N domain PF08495 IPR013702
FIST_C FIST C domain PF10442 IPR019494
FIVAR Uncharacterised Sugar-binding Domain PF07554 IPR011490
FixH FixH PF05751 IPR008620
FixO Cytochrome C oxidase, mono-heme subunit/FixO PF02433 IPR003468
FixQ Cbb3-type cytochrome oxidase component FixQ PF05545 IPR008621
FKBP12 Ca-release from SR modulating protein glomulin or FKBP-12 PF10478
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase PF00254 IPR001179
FKBP_N Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PF01346 IPR000774
FlaA Flagellar filament outer layer protein FlaA PF04620 IPR006714
FlaC_arch Flagella accessory protein C (FlaC) PF05377 IPR008039
FlaE Flagellar basal body protein FlaE PF07559 IPR011491
FlaF Flagellar protein FlaF PF07309 IPR010845
FlaG FlaG protein PF03646 IPR005186
Flag1_repress Repressor of phase-1 flagellin PF03614 IPR003223
Flagellar_rod Paraflagellar rod protein PF05149 IPR007824
Flagellin_C Bacterial flagellin C-terminus PF00700 IPR001029
Flagellin_D3 Flagellin D3 domain PF08884 IPR014981
Flagellin_IN Flagellin hook IN motif PF07196 IPR010810
Flagellin_N Bacterial flagellin N-terminus PF00669 IPR001492
Flavin_Reduct Flavin reductase like domain PF01613 IPR002563
Flavi_capsid Flavivirus capsid protein C PF01003 IPR001122
Flavi_DEAD Flavivirus DEAD domain PF07652 IPR011492
Flavi_glycoprot Flavivirus glycoprotein, central and dimerisation domains PF00869 IPR011999
Flavi_glycop_C Flavivirus glycoprotein, immunoglobulin-like domain PF02832 IPR000336
Flavi_M Flavivirus envelope glycoprotein M PF01004 IPR000069
Flavi_NS1 Flavivirus non-structural Protein NS1 PF00948 IPR001157
Flavi_NS2A Flavivirus non-structural protein NS2A PF01005 IPR000752
Flavi_NS2B Flavivirus non-structural protein NS2B PF01002 IPR000487
Flavi_NS4A Flavivirus non-structural protein NS4A PF01350 IPR000404
Flavi_NS4B Flavivirus non-structural protein NS4B PF01349 IPR001528
Flavi_NS5 Flavivirus RNA-directed RNA polymerase PF00972 IPR000208
Flavi_propep Flavivirus polyprotein propeptide PF01570 IPR002535
Flavodoxin_1 Flavodoxin PF00258 IPR008254
Flavodoxin_2 Flavodoxin-like fold PF02525 IPR003680
Flavodoxin_NdrI NrdI Flavodoxin like PF07972 IPR004465
Flavokinase Riboflavin kinase PF01687 IPR015865
Flavoprotein Flavoprotein PF02441 IPR003382
FlbD Flagellar protein (FlbD) PF06289 IPR009384
FlbT Flagellar protein FlbT PF07378 IPR009967
FleQ Flagellar regulatory protein FleQ PF06490 IPR010518
Flexi_CP Viral coat protein PF00286 IPR000052
Flexi_CP_N Carlavirus coat PF08358 IPR013569
FlgD Flagellar hook capping protein PF03963 IPR005648
FlgH Flagellar L-ring protein PF02107 IPR000527
FlgI Flagellar P-ring protein PF02119 IPR001782
FlgM Anti-sigma-28 factor, FlgM PF04316 IPR007412
FlgN FlgN protein PF05130 IPR007809
Flg_bb_rod Flagella basal body rod protein PF00460 IPR001444
Flg_hook Flagellar hook-length control protein PF02120 IPR021136
Flg_new Listeria-Bacteroides repeat domain (List_Bact_rpt) PF09479 IPR013378
FlhC Flagellar transcriptional activator (FlhC) PF05280 IPR007944
FlhD Flagellar transcriptional activator (FlhD) PF05247 IPR007911
FlhE Flagellar protein FlhE PF06366 IPR009420
FliD_C Flagellar hook-associated protein 2 C-terminus PF07195 IPR010809
FliD_N Flagellar hook-associated protein 2 C-terminus PF02465 IPR003481
FliE Flagellar hook-basal body complex protein FliE PF02049 IPR001624
FliG_C FliG C-terminal domain PF01706 IPR000090
FliH Flagellar assembly protein FliH PF02108 IPR018035
FliJ Flagellar FliJ protein PF02050 IPR012823
FliL Flagellar basal body-associated protein FliL PF03748 IPR005503
FLILHELTA Hypothetical protein FLILHELTA PF10306 IPR018811
FliM Flagellar motor switch protein FliM PF02154 IPR001689
FliO Flagellar biosynthesis protein, FliO PF04347
FliP FliP family PF00813 IPR005838
FliS Flagellar protein FliS PF02561 IPR003713
FliT Flagellar protein FliT PF05400 IPR008622
FliW FliW protein PF02623 IPR003775
FliX Class II flagellar assembly regulator PF10768 IPR019704
Flo11 Flo11 domain PF10182 IPR018789
Flocculin Flocculin repeat PF00624 IPR001389
FLO_LFY Floricaula / Leafy protein PF01698 IPR002910
FlpD Methyl-viologen-reducing hydrogenase, delta subunit PF02662 IPR003813
Flp_C Recombinase Flp protein PF05202 IPR005626
Flp_Fap Flp/Fap pilin component PF04964 IPR007047
Flp_N Recombinase Flp protein N-terminus PF03930 IPR022647
Flt3_lig flt3 ligand PF02947 IPR004213
FluMu_gp41 Mu-like prophage FluMu protein gp41 PF10109 IPR019289
Flu_B_M2 Influenza B matrix protein 2 (BM2) PF04772 IPR006859
Flu_B_NS1 Influenza B non-structural protein (NS1) PF02942 IPR004208
Flu_C_NS1 Influenza C non-structural protein (NS1) PF03506 IPR005187
Flu_C_NS2 Influenza C non-structural protein (NS2) PF03555 IPR005188
Flu_M1 Influenza Matrix protein (M1) PF00598 IPR001561
Flu_M1_C Influenza Matrix protein (M1) C-terminal domain PF08289 IPR013188
Flu_M2 Influenza Matrix protein (M2) PF00599 IPR002089
Flu_NP Influenza virus nucleoprotein PF00506 IPR002141
Flu_NS1 Influenza non-structural protein (NS1) PF00600 IPR000256
Flu_NS2 Influenza non-structural protein (NS2) PF00601 IPR000968
Flu_PA Influenza RNA-dependent RNA polymerase subunit PA PF00603 IPR001009
Flu_PB1 Influenza RNA-dependent RNA polymerase subunit PB1 PF00602 IPR001407
Flu_PB2 Influenza RNA-dependent RNA polymerase subunit PB2 PF00604 IPR001591
FLYWCH FLYWCH zinc finger domain PF04500 IPR007588
FMC1 FMC1 protein family PF10560
FmdA_AmdA Acetamidase/Formamidase family PF03069 IPR004304
FMN_bind FMN-binding domain PF04205 IPR007329
FMN_bind_2 Putative FMN-binding domain PF04299 IPR007396
FMN_dh FMN-dependent dehydrogenase PF01070 IPR000262
FMN_red NADPH-dependent FMN reductase PF03358 IPR005025
FMO-like Flavin-binding monooxygenase-like PF00743 IPR020946
Fmp27_GFWDK RNA pol II promoter Fmp27 protein domain PF10347 IPR019441
Fmp27_SW RNA pol II promoter Fmp27 protein domain PF10305 IPR019415
Fmp27_WPPW RNA pol II promoter Fmp27 protein domain PF10359 IPR019449
FmrO Ribosomal RNA methyltransferase (FmrO) PF07091
fn1 Fibronectin type I domain PF00039 IPR000083
fn2 Fibronectin type II domain PF00040 IPR000562
fn3 Fibronectin type III domain PF00041 IPR003961
FNIP FNIP Repeat PF05725 IPR008615
Fn_bind Fibronectin binding repeat PF02986 IPR004237
Foamy_BEL Foamy virus BEL 1/2 protein PF03274 IPR004956
Foamy_virus_ENV Foamy virus envelope protein PF03408 IPR005070
Focal_AT Focal adhesion targeting region PF03623 IPR005189
FokI_C Restriction endonuclease FokI, catalytic domain PF02980 IPR004233
FokI_N Restriction endonuclease FokI, recognition domain PF02981 IPR004234
Folate_carrier Reduced folate carrier PF01770 IPR002666
Folate_rec Folate receptor family PF03024 IPR018143
FolB Dihydroneopterin aldolase PF02152 IPR006157
FOLN Follistatin/Osteonectin-like EGF domain PF09289 IPR015369
FOP_dimer FOP N terminal dimerisation domain PF09398 IPR018993
Fork_head Fork head domain PF00250 IPR001766
Fork_head_N Forkhead N-terminal region PF08430 IPR013638
Form-deh_trans Formate dehydrogenase N, transmembrane PF09163 IPR015246
Formyl_trans_C Formyl transferase, C-terminal domain PF02911 IPR005793
Formyl_trans_N Formyl transferase PF00551 IPR002376
Form_Nir_trans Formate/nitrite transporter PF01226 IPR000292
FPL Uncharacterised conserved protein PF09758 IPR019155
FPN1 Ferroportin1 (FPN1) PF06963 IPR009716
FR47 FR47-like protein PF08445 IPR013653
Fra10Ac1 Folate-sensitive fragile site protein Fra10Ac1 PF09725 IPR019129
Frag1 Frag1/DRAM/Sfk1 family PF10277 IPR019402
FragX_IP Cytoplasmic Fragile-X interacting family PF05994 IPR008081
Frataxin_Cyay Frataxin-like domain PF01491 IPR002908
FRD2 Bacteriophage FRD2 protein PF03197 IPR004885
FRG FRG domain PF08867 IPR014966
FRG1 FRG1-like family PF06229 IPR010414
FrhB_FdhB_C Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus PF04432 IPR007525
FrhB_FdhB_N Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N terminus PF04422 IPR007516
Frigida Frigida-like protein PF07899 IPR012474
Fringe Fringe-like PF02434 IPR003378
Frizzled Frizzled/Smoothened family membrane region PF01534 IPR000539
FrpC RTX iron-regulated protein FrpC PF06901 IPR010692
FRQ Frequency clock protein PF09421 IPR018554
Fructosamin_kin Fructosamine kinase PF03881 IPR016477
FSA_C Fragile site-associated protein C-terminus PF10479 IPR018863
FSH1 Serine hydrolase (FSH1) PF03959 IPR005645
FTCD Formiminotransferase domain PF02971 IPR013802
FTCD_C Formiminotransferase-cyclodeaminase PF04961 IPR007044
FTCD_N Formiminotransferase domain, N-terminal subdomain PF07837 IPR012886
FTH FTH domain PF01827 IPR002900
FTHFS Formate--tetrahydrofolate ligase PF01268 IPR000559
FTP Fungalysin/Thermolysin Propeptide Motif PF07504 IPR011096
FTR Formylmethanofuran--tetrahydromethanopterin formyltransferase, distal lobe PF01913 IPR022667
FTR1 Iron permease FTR1 family PF03239 IPR004923
FTR_C FTR, proximal lobe PF02741 IPR002770
FtsA Cell division protein FtsA PF02491 IPR003494
FtsH_ext FtsH Extracellular PF06480 IPR011546
FtsJ FtsJ-like methyltransferase PF01728 IPR002877
Ftsk_gamma Ftsk gamma domain PF09397 IPR018541
FtsK_SpoIIIE FtsK/SpoIIIE family PF01580 IPR002543
FtsL Cell division protein FtsL PF04999 IPR007082
FtsQ Cell division protein FtsQ PF03799 IPR005548
FTSW_RODA_SPOVE Cell cycle protein PF01098 IPR001182
FtsX Predicted permease PF02687 IPR003838
FTZ Fushi tarazu (FTZ), N-terminal region PF03867 IPR005567
Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) PF07429 IPR009993
Fucokinase L-fucokinase PF07959 IPR012887
Fucose_iso_C L-fucose isomerase, C-terminal domain PF02952 IPR015888
Fucose_iso_N1 L-fucose isomerase, first N-terminal domain PF07881 IPR012888
Fucose_iso_N2 L-fucose isomerase, second N-terminal domain PF07882 IPR012889
FumaraseC_C Fumarase C C-terminus PF10415 IPR018951
Fumarate_red_C Fumarate reductase subunit C PF02300 IPR003510
Fumarate_red_D Fumarate reductase subunit D PF02313 IPR003418
Fumble Fumble PF03630 IPR011602
Fumerase Fumarate hydratase (Fumerase) PF05681 IPR004646
Fumerase_C Fumarase C-terminus PF05683 IPR004647
Fum_red_TM Fumarate reductase respiratory complex, transmembrane subunit PF02967
FUN14 FUN14 family PF04930 IPR007014
Fungal_lectin Fungal fucose-specific lectin PF07938 IPR012475
Fungal_trans Fungal specific transcription factor domain PF04082 IPR007219
Fun_ATP-synt_8 Fungal ATP synthase protein 8 (A6L) PF05933 IPR009230
FUR Ferric uptake regulator family PF01475 IPR002481
Furin-like Furin-like cysteine rich region PF00757 IPR006211
FUSC Fusaric acid resistance protein conserved region PF04632 IPR006726
Fusion_gly Fusion glycoprotein F0 PF00523 IPR000776
Fusion_gly_K Cell fusion glycoprotein K PF01621 IPR002567
Fve Fungal immunomodulatory protein Fve PF09259 IPR015339
FwdE Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE PF02663 IPR003814
FxsA FxsA cytoplasmic membrane protein PF04186 IPR007313
FYDLN_acid Protein of unknown function (FYDLN_acid) PF09538 IPR012644
FYRC F/Y rich C-terminus PF05965 IPR003889
FYRN F/Y-rich N-terminus PF05964 IPR003888
FYTT Forty-two-three protein PF07078 IPR009782
FYVE FYVE zinc finger PF01363 IPR000306
Fz Fz domain PF01392 IPR020067
Fzo_mitofusin fzo-like conserved region PF04799 IPR006884
F_actin_bind F-actin binding PF08919 IPR015015
F_actin_cap_B F-actin capping protein, beta subunit PF01115 IPR001698
F_bP_aldolase Fructose-bisphosphate aldolase class-II PF01116 IPR000771
G-alpha G-protein alpha subunit PF00503 IPR001019
G-gamma GGL domain PF00631 IPR015898
G-patch G-patch domain PF01585 IPR000467
G10 G10 protein PF01125 IPR001748
G2F G2F domain PF07474 IPR006605
G3P_antiterm Glycerol-3-phosphate responsive antiterminator PF04309 IPR006699
G5 G5 domain PF07501 IPR011098
G6PD_bact Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) PF10786 IPR019722
G6PD_C Glucose-6-phosphate dehydrogenase, C-terminal domain PF02781 IPR022675
G6PD_N Glucose-6-phosphate dehydrogenase, NAD binding domain PF00479 IPR022674
G8 G8 domain PF10162 IPR019316
GA GA module PF01468 IPR002988
Gaa1 Gaa1-like, GPI transamidase component PF04114 IPR007246
GAD GAD domain PF02938 IPR004115
GAD-like GAD-like domain PF08887 IPR014983
GAF GAF domain PF01590 IPR003018
GAGA GAGA factor PF09237
GAGE GAGE protein PF05831 IPR008625
Gag_MA Matrix protein (MA), p15 PF01140 IPR000840
Gag_p10 Retroviral GAG p10 protein PF02337 IPR003322
Gag_p12 Gag polyprotein, inner coat protein p12 PF01141 IPR002079
Gag_p15 Gag protein p15 PF08723 IPR014834
Gag_p17 gag gene protein p17 (matrix protein) PF00540 IPR000071
Gag_p19 Major core protein p19 PF02228 IPR003139
Gag_p24 gag gene protein p24 (core nucleocapsid protein) PF00607 IPR000721
Gag_p30 Gag P30 core shell protein PF02093 IPR003036
Gag_p6 Gag protein p6 PF08705 IPR014817
Gag_spuma Spumavirus gag protein PF03276 IPR004957
Gal-3-0_sulfotr Galactose-3-O-sulfotransferase PF06990 IPR009729
Gal-bind_lectin Galactoside-binding lectin PF00337 IPR001079
GAL11 Transcription regulatory protein GAL11 PF05397 IPR008626
Gal4_dimer Gal4-like dimerisation domain PF03902 IPR005600
Galactosyl_T Galactosyltransferase PF01762 IPR002659
Galactosyl_T_2 Galactosyltransferase PF02709
Galanin Galanin PF01296 IPR008174
GalKase_gal_bdg Galactokinase galactose-binding signature PF10509 IPR019539
Gallidermin Gallidermin PF02052 IPR006079
GalP_UDP_transf Galactose-1-phosphate uridyl transferase, N-terminal domain PF01087 IPR005849
GalP_UDP_tr_C Galactose-1-phosphate uridyl transferase, C-terminal domain PF02744 IPR005850
Gal_Lectin Galactose binding lectin domain PF02140 IPR000922
Gam Host-nuclease inhibitor protein Gam PF06064 IPR009274
Gamma-COP Coatomer gamma subunit appendage domain PF08752 IPR014863
Gamma-thionin Gamma-thionin family PF00304 IPR008176
Gar1 Gar1 protein RNA binding region PF04410 IPR007504
GARS_A Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PF01071 IPR020561
GARS_C Phosphoribosylglycinamide synthetase, C domain PF02843 IPR020560
GARS_N Phosphoribosylglycinamide synthetase, N domain PF02844 IPR020562
GAS2 Growth-Arrest-Specific Protein 2 Domain PF02187 IPR003108
GASA Gibberellin regulated protein PF02704 IPR003854
Gasdermin Gasdermin family PF04598 IPR007677
Gastrin Gastrin/cholecystokinin family PF00918 IPR001651
Gas_vesicle Gas vesicle protein PF00741 IPR000638
Gas_vesicle_C Gas vesicles protein GVPc repeated domain PF01304 IPR002003
GAT GAT domain PF03127 IPR004152
GATA GATA zinc finger PF00320 IPR000679
GATA-N GATA-type transcription activator, N-terminal PF05349 IPR008013
GATase Glutamine amidotransferase class-I PF00117 IPR000991
GATase_2 Glutamine amidotransferases class-II PF00310 IPR000583
GATase_3 CobB/CobQ-like glutamine amidotransferase domain PF07685 IPR011698
GatB PET112 family, C terminal region PF01162
GatB_N PET112 family, N terminal region PF02934 IPR006075
GatB_Yqey GatB domain PF02637 IPR018027
Gate Nucleoside recognition PF07670 IPR011642
Gb3_synth Alpha 1,4-glycosyltransferase conserved region PF04572 IPR007652
GBP Guanylate-binding protein, N-terminal domain PF02263 IPR015894
GbpC Glucan-binding protein C PF08363 IPR013574
GBP_C Guanylate-binding protein, C-terminal domain PF02841 IPR003191
GBP_PSP Paralytic/GBP/PSP peptide PF02425 IPR003463
GBP_repeat Glycophorin-binding protein PF02526 IPR003681
GBS_Bsp-like GBS Bsp-like repeat PF08481 IPR013688
GCC2_GCC3 GCC2 and GCC3 PF07699 IPR011641
Gcd10p Gcd10p family PF04189 IPR007316
GCD14 tRNA methyltransferase complex GCD14 subunit PF08704 IPR014816
GCFC GC-rich sequence DNA-binding factor-like protein PF07842
GCK GCK domain PF07802 IPR012891
GCM GCM motif protein PF03615 IPR003902
GCN5L1 GCN5-like protein 1 (GCN5L1) PF06320 IPR009395
GcpE GcpE protein PF04551 IPR004588
GCR Glucocorticoid receptor PF02155 IPR001409
GcrA GcrA cell cycle regulator PF07750 IPR011681
GCS Glutamate-cysteine ligase PF03074 IPR004308
GCS2 Glutamate-cysteine ligase family 2(GCS2) PF04107 IPR006336
GCV_H Glycine cleavage H-protein PF01597 IPR002930
GCV_T Aminomethyltransferase folate-binding domain PF01571 IPR006222
GCV_T_C Glycine cleavage T-protein C-terminal barrel domain PF08669 IPR013977
Gcw_chp Bacterial protein of unknown function (Gcw_chp) PF09694 IPR010239
GDA1_CD39 GDA1/CD39 (nucleoside phosphatase) family PF01150 IPR000407
GDC-P Glycine cleavage system P-protein PF02347 IPR020580
GDE_C Amylo-alpha-1,6-glucosidase PF06202 IPR010401
GDI GDP dissociation inhibitor PF00996 IPR018203
GDNF GDNF/GAS1 domain PF02351 IPR016017
GDPD Glycerophosphoryl diester phosphodiesterase family PF03009 IPR004129
GD_AH_C D-galactarate dehydratase / Altronate hydrolase, C terminus PF04295 IPR007392
GED Dynamin GTPase effector domain PF02212 IPR003130
Gelsolin Gelsolin repeat PF00626 IPR007123
Gemin6 Gemin6 protein PF06372 IPR009422
Geminin Geminin PF07412
Gemini_AC4_5 Geminivirus AC4/5 conserved region PF04807 IPR006892
Gemini_AC4_5_2 Geminivirus AC4/5 conserved region PF08464 IPR013671
Gemini_AL1 Geminivirus Rep catalytic domain PF00799 IPR022690
Gemini_AL1_M Geminivirus rep protein central domain PF08283 IPR022692
Gemini_AL2 Geminivirus AL2 protein PF01440 IPR000942
Gemini_AL3 Geminivirus AL3 protein PF01407 IPR000657
Gemini_BL1 Geminivirus BL1 movement protein PF00845 IPR000211
Gemini_BR1 Geminivirus nuclear export factor BR1 PF01489
Gemini_C4 Geminivirus C4 protein PF01492 IPR002488
Gemini_coat Geminivirus coat protein PF00844 IPR000263
Gemini_mov Geminivirus putative movement protein PF01708 IPR002621
Gemini_V1 Geminivirus V1 protein PF01524 IPR002511
Gene66 Gene 66 (IR5) protein PF02053 IPR000714
GerA Bacillus/Clostridium GerA spore germination protein PF03323 IPR004995
GerE Bacterial regulatory proteins, luxR family PF00196 IPR000792
Germane Sporulation and spore germination PF10646 IPR019606
gerPA Spore germination protein gerPA/gerPF PF10676 IPR019618
GerPC Spore germination protein GerPC PF10737 IPR019673
GET2 GET complex subunit GET2 PF08690 IPR014802
GETHR GETHR pentapeptide repeat (5 copies) PF05671 IPR008627
GFA Glutathione-dependent formaldehyde-activating enzyme PF04828 IPR006913
GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold PF01408 IPR000683
GFO_IDH_MocA_C Oxidoreductase family, C-terminal alpha/beta domain PF02894 IPR004104
GFP Green fluorescent protein PF01353 IPR011584
GFRP GTP cyclohydrolase I feedback regulatory protein (GFRP) PF06399 IPR009112
GGDEF GGDEF domain PF00990 IPR000160
GGDN GGDN family PF05165 IPR007839
GH3 GH3 auxin-responsive promoter PF03321 IPR004993
GHMP_kinases_C GHMP kinases C terminal PF08544 IPR013750
GHMP_kinases_N GHMP kinases N terminal domain PF00288 IPR006204
GIDA Glucose inhibited division protein A PF01134 IPR002218
GidB Glucose inhibited division protein PF02527 IPR003682
GIIM Group II intron, maturase-specific domain PF08388 IPR013597
GILT Gamma interferon inducible lysosomal thiol reductase (GILT) PF03227 IPR004911
Gin Inhibitor of sigma-G Gin PF10764 IPR019700
GIT_SHD Spa2 homology domain (SHD) of GIT PF08518 IPR013724
GIY-YIG GIY-YIG catalytic domain PF01541 IPR000305
GKAP Guanylate-kinase-associated protein (GKAP) protein PF03359 IPR005026
Gla Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain PF00594 IPR000294
GlcNAc_2-epim N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) PF07221 IPR010819
GLE1 GLE1-like protein PF07817 IPR012476
GLF UDP-galactopyranose mutase PF03275 IPR015899
GlgS Glycogen synthesis protein PF08971 IPR015065
Gln-synt_C Glutamine synthetase, catalytic domain PF00120 IPR008146
Gln-synt_N Glutamine synthetase, beta-Grasp domain PF03951 IPR008147
GlnD_UR_UTase GlnD PII-uridylyltransferase PF08335 IPR013546
GlnE Glutamate-ammonia ligase adenylyltransferase PF03710 IPR005190
Globin Globin PF00042 IPR000971
Gloverin Gloverin-like protein PF10793 IPR019729
GlpM GlpM protein PF06942 IPR009707
GLTP Glycolipid transfer protein (GLTP) PF08718 IPR014830
GLTT GLTT repeat (6 copies) PF01744 IPR008164
Glt_symporter Sodium/glutamate symporter PF03616 IPR004445
Glu-tRNAGln Glu-tRNAGln amidotransferase C subunit PF02686 IPR003837
Glucan_synthase 1,3-beta-glucan synthase component PF02364 IPR003440
Glucodextran_B Glucodextranase, domain B PF09136 IPR015219
Glucodextran_N Glucodextranase, domain N PF09137 IPR015220
Glucokinase Glucokinase PF02685 IPR003836
Glucosamine_iso Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PF01182 IPR006148
Glucosaminidase Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PF01832 IPR002901
Glug The GLUG motif PF07581 IPR011493
GluR_Homer-bdg Homer-binding domain of metabotropic glutamate receptor PF10606 IPR019588
Glutaminase Glutaminase PF04960 IPR015868
Glutaredoxin Glutaredoxin PF00462 IPR002109
Glutaredoxin2_C Glutaredoxin 2, C terminal domain PF04399 IPR007494
Glutenin_hmw High molecular weight glutenin subunit PF03157 IPR022358
GlutR_dimer Glutamyl-tRNAGlu reductase, dimerisation domain PF00745 IPR015896
GlutR_N Glutamyl-tRNAGlu reductase, N-terminal domain PF05201 IPR015895
Glu_cyclase_2 Glutamine cyclotransferase PF05096 IPR007788
Glu_cys_ligase Glutamate-cysteine ligase PF04262 IPR007370
Glu_synthase Conserved region in glutamate synthase PF01645 IPR002932
Glu_syn_central Glutamate synthase central domain PF04898 IPR006982
GLYCAM-1 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) PF05242 IPR007906
Glycogen_syn Glycogen synthase PF05693 IPR008631
Glycolytic Fructose-bisphosphate aldolase class-I PF00274 IPR000741
Glycophorin_A Glycophorin A PF01102 IPR001195
Glycoprotein_B Herpesvirus Glycoprotein B PF00606 IPR000234
Glycoprotein_G Pneumovirus attachment glycoprotein G PF00802 IPR000925
GlycosTransf Predicted glycosyltransferase involved in capsule biosynthesis PF10111 IPR019290
Glycos_transf_1 Glycosyl transferases group 1 PF00534 IPR001296
Glycos_transf_2 Glycosyl transferase family 2 PF00535 IPR001173
Glycos_transf_3 Glycosyl transferase family, a/b domain PF00591 IPR000312
Glycos_transf_4 Glycosyl transferase family 4 PF00953 IPR018481
Glycos_transf_N 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PF04413 IPR007507
Glycos_trans_3N Glycosyl transferase family, helical bundle domain PF02885 IPR017459
Glyco_hydro_1 Glycosyl hydrolase family 1 PF00232 IPR001360
Glyco_hydro_10 Glycosyl hydrolase family 10 PF00331 IPR001000
Glyco_hydro_11 Glycosyl hydrolases family 11 PF00457 IPR001137
Glyco_hydro_12 Glycosyl hydrolase family 12 PF01670 IPR002594
Glyco_hydro_14 Glycosyl hydrolase family 14 PF01373 IPR001554
Glyco_hydro_15 Glycosyl hydrolases family 15 PF00723 IPR011613
Glyco_hydro_16 Glycosyl hydrolases family 16 PF00722 IPR000757
Glyco_hydro_17 Glycosyl hydrolases family 17 PF00332 IPR000490
Glyco_hydro_18 Glycosyl hydrolases family 18 PF00704 IPR001223
Glyco_hydro_19 Chitinase class I PF00182 IPR000726
Glyco_hydro_2 Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain PF00703 IPR006102
Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain PF00728 IPR015883
Glyco_hydro_20b Glycosyl hydrolase family 20, domain 2 PF02838 IPR015882
Glyco_hydro_25 Glycosyl hydrolases family 25 PF01183 IPR002053
Glyco_hydro_26 Glycosyl hydrolase family 26 PF02156
Glyco_hydro_28 Glycosyl hydrolases family 28 PF00295 IPR000743
Glyco_hydro_2_C Glycosyl hydrolases family 2, TIM barrel domain PF02836 IPR006103
Glyco_hydro_2_N Glycosyl hydrolases family 2, sugar binding domain PF02837 IPR006104
Glyco_hydro_3 Glycosyl hydrolase family 3 N terminal domain PF00933 IPR001764
Glyco_hydro_30 O-Glycosyl hydrolase family 30 PF02055 IPR001139
Glyco_hydro_31 Glycosyl hydrolases family 31 PF01055 IPR000322
Glyco_hydro_32C Glycosyl hydrolases family 32 C terminal PF08244 IPR013189
Glyco_hydro_32N Glycosyl hydrolases family 32 N terminal PF00251 IPR013148
Glyco_hydro_35 Glycosyl hydrolases family 35 PF01301 IPR001944
Glyco_hydro_38 Glycosyl hydrolases family 38 N-terminal domain PF01074 IPR000602
Glyco_hydro_38C Glycosyl hydrolases family 38 C-terminal domain PF07748 IPR011682
Glyco_hydro_39 Glycosyl hydrolases family 39 PF01229 IPR000514
Glyco_hydro_3_C Glycosyl hydrolase family 3 C terminal domain PF01915 IPR002772
Glyco_hydro_4 Family 4 glycosyl hydrolase PF02056 IPR001088
Glyco_hydro_42 Beta-galactosidase PF02449 IPR013529
Glyco_hydro_42C Beta-galactosidase C-terminal domain PF08533 IPR013739
Glyco_hydro_42M Beta-galactosidase trimerisation domain PF08532 IPR013738
Glyco_hydro_43 Glycosyl hydrolases family 43 PF04616 IPR006710
Glyco_hydro_45 Glycosyl hydrolase family 45 PF02015 IPR000334
Glyco_hydro_46 Glycosyl hydrolase family 46 PF01374 IPR000400
Glyco_hydro_47 Glycosyl hydrolase family 47 PF01532 IPR001382
Glyco_hydro_48 Glycosyl hydrolase family 48 PF02011 IPR000556
Glyco_hydro_49 Glycosyl hydrolase family 49 PF03718 IPR005192
Glyco_hydro_52 Glycosyl hydrolase family 52 PF03512 IPR000852
Glyco_hydro_53 Glycosyl hydrolase family 53 PF07745 IPR011683
Glyco_hydro_56 Hyaluronidase PF01630 IPR018155
Glyco_hydro_57 Glycosyl hydrolase family 57 PF03065 IPR004300
Glyco_hydro_59 Glycosyl hydrolase family 59 PF02057 IPR001286
Glyco_hydro_6 Glycosyl hydrolases family 6 PF01341 IPR016288
Glyco_hydro_61 Glycosyl hydrolase family 61 PF03443 IPR005103
Glyco_hydro_62 Glycosyl hydrolase family 62 PF03664 IPR005193
Glyco_hydro_63 Mannosyl oligosaccharide glucosidase PF03200 IPR004888
Glyco_hydro_65C Glycosyl hydrolase family 65, C-terminal domain PF03633 IPR005194
Glyco_hydro_65m Glycosyl hydrolase family 65 central catalytic domain PF03632 IPR005195
Glyco_hydro_65N Glycosyl hydrolase family 65, N-terminal domain PF03636 IPR005196
Glyco_hydro_67C Glycosyl hydrolase family 67 C-terminus PF07477 IPR011099
Glyco_hydro_67M Glycosyl hydrolase family 67 middle domain PF07488 IPR011100
Glyco_hydro_67N Glycosyl hydrolase family 67 N-terminus PF03648 IPR005154
Glyco_hydro_68 Levansucrase/Invertase PF02435 IPR003469
Glyco_hydro_7 Glycosyl hydrolase family 7 PF00840 IPR001722
Glyco_hydro_70 Glycosyl hydrolase family 70 PF02324 IPR003318
Glyco_hydro_71 Glycosyl hydrolase family 71 PF03659 IPR005197
Glyco_hydro_72 Glycolipid anchored surface protein (GAS1) PF03198 IPR004886
Glyco_hydro_76 Glycosyl hydrolase family 76 PF03663 IPR005198
Glyco_hydro_77 4-alpha-glucanotransferase PF02446 IPR003385
Glyco_hydro_79n Glycosyl hydrolase family 79, N-terminal domain PF03662 IPR005199
Glyco_hydro_8 Glycosyl hydrolases family 8 PF01270 IPR002037
Glyco_hydro_81 Glycosyl hydrolase family 81 PF03639 IPR005200
Glyco_hydro_85 Glycosyl hydrolase family 85 PF03644 IPR005201
Glyco_hydro_88 Glycosyl Hydrolase Family 88 PF07470 IPR010905
Glyco_hydro_9 Glycosyl hydrolase family 9 PF00759 IPR001701
Glyco_hydro_92 Glycosyl hydrolase family 92 PF07971 IPR012939
Glyco_hydro_97 Glycoside hydrolase 97 PF10566 IPR019563
Glyco_hydro_98C Glycosyl hydrolase family 98 C-terminal domain PF08307 IPR013190
Glyco_hydro_98M Glycosyl hydrolase family 98 PF08306 IPR013191
Glyco_transf_10 Glycosyltransferase family 10 (fucosyltransferase) PF00852 IPR001503
Glyco_transf_11 Glycosyl transferase family 11 PF01531 IPR002516
Glyco_transf_15 Glycolipid 2-alpha-mannosyltransferase PF01793 IPR002685
Glyco_transf_17 Glycosyltransferase family 17 PF04724 IPR006813
Glyco_transf_20 Glycosyltransferase family 20 PF00982 IPR001830
Glyco_transf_22 Alg9-like mannosyltransferase family PF03901 IPR005599
Glyco_transf_25 Glycosyltransferase family 25 (LPS biosynthesis protein) PF01755 IPR002654
Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain PF03033 IPR004276
Glyco_transf_29 Glycosyltransferase family 29 (sialyltransferase) PF00777 IPR001675
Glyco_transf_34 galactosyl transferase GMA12/MNN10 family PF05637 IPR008630
Glyco_transf_36 Glycosyltransferase family 36 PF06165 IPR010383
Glyco_transf_43 Glycosyltransferase family 43 PF03360 IPR005027
Glyco_transf_5 Starch synthase catalytic domain PF08323 IPR013534
Glyco_transf_52 Glycosyltransferase family 52 PF07922 IPR012477
Glyco_transf_54 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region PF04666 IPR006759
Glyco_transf_6 Glycosyltransferase family 6 PF03414 IPR005076
Glyco_transf_64 Glycosyl transferase family 64 domain PF09258 IPR015338
Glyco_transf_8 Glycosyl transferase family 8 PF01501 IPR002495
Glyco_transf_8N Glycosyl transferase family 8 C-terminal PF08437 IPR013645
Glyco_transf_9 Glycosyltransferase family 9 (heptosyltransferase) PF01075 IPR002201
Glyco_tran_28_C Glycosyltransferase family 28 C-terminal domain PF04101 IPR007235
Glyco_tran_WecB Glycosyl transferase WecB/TagA/CpsF family PF03808 IPR004629
Glyoxalase Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF00903 IPR004360
Glyoxal_oxid_N Glyoxal oxidase N-terminus PF07250 IPR009880
Glyphos_transf CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase PF04464 IPR007554
Glypican Glypican PF01153 IPR001863
Gly_acyl_tr_C Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region PF08444 IPR013652
Gly_acyl_tr_N Aralkyl acyl-CoA:amino acid N-acyltransferase PF06021 IPR015938
Gly_kinase Glycerate kinase family PF02595 IPR004381
Gly_radical Glycine radical PF01228 IPR001150
Gly_reductase Glycine/sarcosine/betaine reductase component B subunits alpha and beta PF09338 IPR015417
Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif PF04488 IPR007577
Gmad1 Lipoprotein LpqB beta-propeller domain PF10647 IPR018910
Gmad2 Immunoglobulin-like domain of bacterial spore germination PF10648 IPR018911
GMAP Galanin message associated peptide (GMAP) PF06540 IPR013068
GMC_oxred_C GMC oxidoreductase PF05199 IPR007867
GMC_oxred_N GMC oxidoreductase PF00732 IPR000172
GMP_PDE_delta GMP-PDE, delta subunit PF05351 IPR008015
GMP_synt_C GMP synthase C terminal domain PF00958 IPR001674
Gmx_para_CXXCG Protein of unknown function (Gmx_para_CXXCG) PF09535 IPR011750
GM_CSF Granulocyte-macrophage colony-stimulating factor PF01109 IPR000773
GN3L_Grn1 GNL3L/Grn1 putative GTPase PF08701 IPR014813
GnRH Gonadotropin-releasing hormone PF00446 IPR002012
GnsAB GnsA/GnsB family PF08178 IPR012563
GNT-I GNT-I family PF03071 IPR004139
GntP_permease GntP family permease PF02447 IPR003474
GntR Bacterial regulatory proteins, gntR family PF00392 IPR000524
Golgin_A5 Golgin subfamily A member 5 PF09787 IPR019177
GoLoco GoLoco motif PF02188 IPR003109
GON GON domain PF08685 IPR012314
Gon7 Gon7 family PF08738 IPR014849
Got1 Got1-like family PF04178 IPR007305
Gp-FAR-1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) PF05823 IPR008632
GP11 GP11 baseplate wedge protein PF08677 IPR014791
gp12-short_mid Phage short tail fibre protein gp12, middle domain PF09089 IPR015173
GP120 Envelope glycoprotein GP120 PF00516 IPR000777
Gp23 Major capsid protein Gp23 PF07068 IPR010762
GP3 Equine arteritis virus GP3 PF03076 IPR004310
gp32 gp32 DNA binding protein like PF08804 IPR012339
GP36 Env gp36 protein (HERV/MMTV type) PF03056
Gp37 Gp37 protein PF09646 IPR018602
Gp37_Gp68 Phage protein Gp37/Gp68 PF07505 IPR011101
GP38 Phage tail fibre adhesin Gp38 PF05268 IPR007932
GP4 GP4 PF03010 IPR004257
GP41 Envelope Polyprotein GP41 PF00517 IPR000328
gp45-slide_C gp45 sliding clamp, C terminal PF09116 IPR015200
GP46 Phage protein GP46 PF07409 IPR010877
Gp49 Phage derived protein Gp49-like (DUF891) PF05973 IPR009241
Gp58 gp58-like protein PF07902 IPR012892
Gp5_C Gp5 C-terminal repeat (3 copies) PF06715 IPR010609
Gp5_OB Gp5 N-terminal OB domain PF06714 IPR009590
GpcrRhopsn4 Rhodopsin-like GPCR transmembrane domain PF10192 IPR019336
gpD Bacteriophage scaffolding protein D PF02925 IPR004196
GPDPase_memb Membrane domain of glycerophosphoryl diester phosphodiesterase PF10110 IPR018476
GPI Glucose-6-phosphate isomerase (GPI) PF06560 IPR010551
Gpi1 N-acetylglucosaminyl transferase component (Gpi1) PF05024 IPR007720
Gpi16 Gpi16 subunit, GPI transamidase component PF04113 IPR007245
GPI2 Phosphatidylinositol N-acetylglucosaminyltransferase PF06432 IPR009450
GPP34 Golgi phosphoprotein 3 (GPP34) PF05719 IPR008628
GPS Latrophilin/CL-1-like GPS domain PF01825 IPR000203
gpW gpW PF02831 IPR004174
GPW_gp25 Gene 25-like lysozyme PF04965 IPR007048
Gp_dh_C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PF02800 IPR020829
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PF00044 IPR020828
GRA6 Granule antigen protein (GRA6) PF05084 IPR008119
GRAB GRIP-related Arf-binding domain PF10375 IPR019459
GRAM GRAM domain PF02893 IPR004182
Gram_pos_anchor Gram positive anchor PF00746 IPR019948
Granin Granin (chromogranin or secretogranin) PF01271 IPR001990
Granulin Granulin PF00396 IPR000118
GRAS GRAS family transcription factor PF03514 IPR005202
GRASP55_65 GRASP55/65 family PF04495 IPR007583
GRDA Glycine reductase complex selenoprotein A PF04723 IPR006812
GRDB Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) PF07355
GreA_GreB Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain PF01272 IPR001437
GreA_GreB_N Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain PF03449 IPR022691
GRIM-19 GRIM-19 protein PF06212 IPR009346
GRIP GRIP domain PF01465 IPR000237
Ground-like Ground-like domain PF04155 IPR007284
GRP Glycine rich protein family PF07172 IPR010800
Grp1_Fun34_YaaH GPR1/FUN34/yaaH family PF01184 IPR000791
GrpE GrpE PF01025 IPR000740
GSCFA GSCFA family PF08885 IPR014982
GSDH Glucose / Sorbosone dehydrogenase PF07995
GSG-1 GSG1-like protein PF07803 IPR012478
GSH-S_ATP Prokaryotic glutathione synthetase, ATP-grasp domain PF02955 IPR004218
GSH-S_N Prokaryotic glutathione synthetase, N-terminal domain PF02951 IPR004215
GshA Glutamate-cysteine ligase PF08886 IPR011718
GSHPx Glutathione peroxidase PF00255 IPR000889
GSH_synthase Eukaryotic glutathione synthase PF03199 IPR004887
GSH_synth_ATP Eukaryotic glutathione synthase, ATP binding domain PF03917 IPR005615
GSK-3_bind Glycogen synthase kinase-3 binding PF05350 IPR008014
GSPII_E Type II/IV secretion system protein PF00437 IPR001482
GSPII_E_N GSPII_E N-terminal domain PF05157 IPR007831
GSPII_F Bacterial type II secretion system protein F domain PF00482 IPR018076
GSPII_G Bacterial type II secretion system protein G PF08334 IPR013545
GSPII_IJ Bacterial type II secretion system protein I/J PF02501 IPR003413
GSPII_N Bacterial type II secretion system protein N PF01203
GspK General secretion pathway protein K PF03934
GspL General secretion pathway protein L (GspL) PF05134 IPR007812
GspM General secretion pathway, M protein PF04612 IPR007690
GspM_II General secretion pathway protein M PF10741 IPR019677
GSP_synth Glutathionylspermidine synthase PF03738 IPR005494
GST_C Glutathione S-transferase, C-terminal domain PF00043 IPR004046
GST_N Glutathione S-transferase, N-terminal domain PF02798 IPR004045
GSu_C4xC__C2xCH Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) PF09698 IPR010176
GT36_AF Glycosyltransferase 36 associated family PF06205 IPR010403
GTF2I GTF2I-like repeat PF02946 IPR004212
Gti1_Pac2 Gti1/Pac2 family PF09729 IPR018608
GTP1_OBG GTP1/OBG PF01018 IPR006169
GTPase_binding GTPase binding PF09027 IPR015116
GTP_cyclohydro2 GTP cyclohydrolase II PF00925 IPR000926
GTP_cyclohydroI GTP cyclohydrolase I PF01227 IPR020602
GTP_EFTU Elongation factor Tu GTP binding domain PF00009 IPR000795
GTP_EFTU_D2 Elongation factor Tu domain 2 PF03144 IPR004161
GTP_EFTU_D3 Elongation factor Tu C-terminal domain PF03143 IPR004160
Gtr1_RagA Gtr1/RagA G protein conserved region PF04670 IPR006762
GtrA GtrA-like protein PF04138 IPR007267
Guanylate_cyc Adenylate and Guanylate cyclase catalytic domain PF00211 IPR001054
Guanylate_cyc_2 Guanylyl cyclase PF09778 IPR018616
Guanylate_kin Guanylate kinase PF00625 IPR008144
Guanylin Guanylin precursor PF02058 IPR000879
Gua_kin_assoc_C Methyl-aspartate NMDA receptor WVP C-terminal domain PF10603
GUCT GUCT (NUC152) domain PF08152 IPR012562
GumN GumN protein PF07446 IPR010891
GUN4 GUN4-like PF05419 IPR008629
GutM Glucitol operon activator protein (GutM) PF06923 IPR009693
GvpD GvpD gas vesicle protein PF07088 IPR009788
GvpG Gas vesicle protein G PF05120 IPR007804
GvpH GvpH PF05455 IPR008633
GvpK Gas vesicle protein K PF05121 IPR007805
GvpL_GvpF Gas vesicle synthesis protein GvpL/GvpF PF06386 IPR009430
GvpO Gas vesicle synthesis protein GvpO PF05800 IPR008634
GWT1 GWT1 PF06423 IPR009447
GXGXG GXGXG motif PF01493 IPR002489
GYD GYD domain PF08734 IPR014845
GYF GYF domain PF02213 IPR003169
Gypsy Gypsy protein PF07253
GYR GYR motif PF02756 IPR004011
Gyro_capsid Gyrovirus capsid protein (VP1) PF04162 IPR007291
Gyro_VP2 Gyrovirus VP2 protein PF04861
G_glu_transpept Gamma-glutamyltranspeptidase PF01019 IPR000101
H-kinase_dim Signal transducing histidine kinase, homodimeric domain PF02895 IPR004105
H-K_ATPase_N Gastric H+/K+-ATPase, N terminal domain PF09040 IPR015127
H2TH Formamidopyrimidine-DNA glycosylase H2TH domain PF06831 IPR015886
HA Helicase associated domain PF03457 IPR005114
HA2 Helicase associated domain (HA2) PF04408 IPR007502
HABP4_PAI-RBP1 Hyaluronan / mRNA binding family PF04774 IPR006861
Haemadin Haemadin PF09065 IPR015150
Haemagg_act haemagglutination activity domain PF05860 IPR008638
Haemat_rec_S_F2 Haematopoeitin receptor binding domain short PF10556
Hairy_orange Hairy Orange PF07527 IPR003650
Halogen_Hydrol 5-bromo-4-chloroindolyl phosphate hydrolysis protein PF10112 IPR018770
Halo_GVPC Halobacterial gas vesicle protein C (GVPC) repeat PF05465 IPR008639
HalX HalX domain PF08663 IPR013971
HALZ Homeobox associated leucine zipper PF02183 IPR003106
Ham1p_like Ham1 family PF01725 IPR002637
Hamartin Hamartin protein PF04388
HAMP HAMP domain PF00672 IPR003660
HAND HAND PF09110 IPR015194
Hanta_G1 Hantavirus glycoprotein G1 PF01567 IPR002534
Hanta_G2 Hantavirus glycoprotein G2 PF01561 IPR002532
Hanta_nucleocap Hantavirus nucleocapsid protein PF00846 IPR002214
HAP Hydrophobic abundant protein (HAP) PF03866 IPR005566
HAP1_N HAP1 N-terminal conserved region PF04849 IPR006933
HAP2-GCS1 Male gamete fusion factor PF10699 IPR018928
Hap2_elong Histone acetylation protein 2 PF10483 IPR019519
HAP3 Putative flagellar hook-associated protein 3 (HAP3) PF07164
Hap4_Hap_bind Minimal binding domain of Hap4 for binding to Hap2/3/5 PF10297 IPR018287
HARP HepA-related protein (HARP) PF07443 IPR010003
Harpin Harpin protein (HrpN) PF07132
HAS-barrel HAS barrel domain PF09378 IPR018538
HasA Heme-binding protein A (HasA) PF06438 IPR010495
HAT HAT (Half-A-TPR) repeat PF02184 IPR003107
Hat1_N Histone acetyl transferase HAT1 N-terminus PF10394 IPR019467
hATC hAT family dimerisation domain PF05699 IPR008906
HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 IPR003594
HbrB HbrB-like PF08539 IPR013745
Hc1 Histone H1-like protein Hc1 PF07432 IPR010886
HC2 Histone H1-like nucleoprotein HC2 PF07382 IPR009970
HCaRG HCaRG protein PF07258 IPR009886
HCBP_related Haemolysin-type calcium binding protein related domain PF06594 IPR010566
HCCA3 Primary hepatocellular carcinoma protein HCCA3 PF09754 IPR019151
HCNGP HCNGP-like protein PF07818 IPR012479
HCO3_cotransp HCO3- transporter family PF00955 IPR011531
HCR Alpha helical coiled-coil rod protein (HCR) PF07111 IPR009800
HCR1 High-CO2 inducible periplasmic protein PF07692 IPR011643
HCV_capsid Hepatitis C virus capsid protein PF01543 IPR002522
HCV_core Hepatitis C virus core protein PF01542 IPR002521
HCV_env Hepatitis C virus envelope glycoprotein E1 PF01539 IPR002519
HCV_NS1 Hepatitis C virus non-structural protein E2/NS1 PF01560 IPR002531
HCV_NS2 Hepatitis C virus non-structural protein NS2 PF01538 IPR002518
HCV_NS4a Hepatitis C virus non-structural protein NS4a PF01006 IPR000745
HCV_NS4b Hepatitis C virus non-structural protein NS4b PF01001 IPR001490
HCV_NS5a Hepatitis C virus non-structural 5a protein membrane anchor PF01506 IPR002868
HCV_NS5a_1a Hepatitis C virus non-structural 5a zinc finger domain PF08300 IPR013192
HCV_NS5a_1b Hepatitis C virus non-structural 5a domain 1b PF08301 IPR013193
HD HD domain PF01966 IPR006674
HD-ZIP_N HD-ZIP protein N terminus PF04618 IPR006712
HDAC_interact Histone deacetylase (HDAC) interacting PF08295 IPR013194
HDC Histidine carboxylase PI chain PF02329 IPR003427
HdeA hns-dependent expression protein A (HdeA) PF06411 IPR010486
HDOD HDOD domain PF08668 IPR013976
HDPD Bacteriophage lambda head decoration protein D PF02924 IPR004195
HDV_ag Hepatitis delta virus delta antigen PF01517 IPR002506
Head_binding Head binding PF09008 IPR009093
HEAT HEAT repeat PF02985 IPR000357
HEAT_PBS PBS lyase HEAT-like repeat PF03130 IPR004155
HECT HECT-domain (ubiquitin-transferase) PF00632 IPR000569
Helicase_C Helicase conserved C-terminal domain PF00271 IPR001650
HELP HELP motif PF03451 IPR005108
HEM4 Uroporphyrinogen-III synthase HemD PF02602 IPR003754
Hemagglutinin Hemagglutinin PF00509 IPR001364
Hema_esterase Hemagglutinin esterase PF03996 IPR007142
Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein PF02710 IPR003860
Hema_stalk Influenza C hemagglutinin stalk PF08720 IPR014831
Hemerythrin Hemerythrin HHE cation binding domain PF01814 IPR012312
Heme_oxygenase Heme oxygenase PF01126 IPR016053
HemN_C HemN C-terminal region PF06969 IPR010723
Hemocyanin_C Hemocyanin, ig-like domain PF03723 IPR005203
Hemocyanin_M Hemocyanin, copper containing domain PF00372 IPR000896
Hemocyanin_N Hemocyanin, all-alpha domain PF03722 IPR005204
HemolysinCabind Hemolysin-type calcium-binding repeat (2 copies) PF00353 IPR001343
Hemopexin Hemopexin PF00045 IPR018487
hemP Hemin uptake protein hemP PF10636 IPR019600
HemS Haemin-degrading family PF05171 IPR007845
HemX HemX PF04375 IPR007470
HemY_N HemY protein N-terminus PF07219 IPR010817
Hepar_II_III Heparinase II/III-like protein PF07940 IPR012480
Hepatitis_core Hepatitis core antigen PF00906 IPR002006
Hepcidin Hepcidin PF06446 IPR010500
HEPN HEPN domain PF05168 IPR007842
HEPPP_synt_1 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 PF07307 IPR009920
Hepsin-SRCR Hepsin, SRCR PF09272 IPR015352
Hep_59 Hepatocellular carcinoma-associated antigen 59 PF07052 IPR010756
Hep_core_N Hepatitis core protein, putative zinc finger PF08290 IPR013195
Hep_Hag Hep_Hag PF05658 IPR008640
Hermes_DBD Hermes transposase DNA-binding domain PF10683 IPR018473
Herp-Cyclin Herpesviridae viral cyclin PF09241 IPR015322
Herpes_alk_exo Herpesvirus alkaline exonuclease PF01771 IPR001616
Herpes_BBRF1 BRRF1-like protein PF04793 IPR006878
Herpes_BFRF1 Gammaherpesvirus BFRF1 protein PF05900
Herpes_BLLF1 Herpes virus major outer envelope glycoprotein (BLLF1) PF05109 IPR007796
Herpes_BLRF2 Herpesvirus BLRF2 protein PF05812 IPR008642
Herpes_BMRF2 Herpesvirus BMRF2 protein PF04633 IPR006727
Herpes_BTRF1 Herpesvirus BTRF1 protein conserved region PF04682 IPR006772
Herpes_capsid Gammaherpesvirus capsid protein PF06112 IPR009299
Herpes_DNAp_acc Herpes DNA replication accessory factor PF04929 IPR007013
Herpes_env Herpesvirus putative major envelope glycoprotein PF01673 IPR002597
Herpes_gE Alphaherpesvirus glycoprotein E PF02480 IPR003404
Herpes_gG Glycoprotein GG/GX PF02400
Herpes_gI Alphaherpesvirus glycoprotein I PF01688 IPR002874
Herpes_glycop Herpesvirus glycoprotein M PF01528 IPR000785
Herpes_glycop_D Herpesvirus glycoprotein D PF01537 IPR002896
Herpes_glycop_H Herpesvirus glycoprotein H PF02489 IPR003493
Herpes_gp2 Equine herpesvirus glycoprotein gp2 PF05955 IPR010278
Herpes_Helicase Helicase PF02689 IPR003840
Herpes_heli_pri Herpesvirus helicase-primase complex component PF05774 IPR008650
Herpes_HEPA Herpesvirus DNA helicase/primase complex associated protein PF03324 IPR004996
Herpes_ICP4_C Herpesvirus ICP4-like protein C-terminal region PF03585 IPR005205
Herpes_ICP4_N Herpesvirus ICP4-like protein N-terminal region PF03584 IPR005206
Herpes_IE1 Cytomegalovirus IE1 protein PF07340 IPR010855
Herpes_IE2_3 Herpes virus intermediate/early protein 2/3 PF03361 IPR005028
Herpes_IE68 Herpesvirus immediate early protein PF02479 IPR003403
Herpes_IR6 Herpesvirus IR6 protein PF06307 IPR010447
Herpes_LAMP2 Herpesvirus Latent membrane protein 2 PF06126 IPR009304
Herpes_LMP1 Herpesvirus latent membrane protein 1 (LMP1) PF05297 IPR007961
Herpes_LMP2 Gammaherpesvirus latent membrane protein (LMP2) protein PF07415 IPR010881
Herpes_LP Herpesvirus leader protein PF03363 IPR005030
Herpes_MCP Herpes virus major capsid protein PF03122 IPR000912
Herpes_ORF11 Herpesvirus dUTPase protein PF04797 IPR006882
Herpes_ORF63 Tegument protein PF05765
Herpes_ori_bp Origin of replication binding protein PF02399 IPR003450
Herpes_PAP Herpesvirus polymerase accessory protein PF03325 IPR004997
Herpes_pp38 Herpesvirus pp38 phosphoprotein PF04846 IPR006930
Herpes_pp85 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) PF04637 IPR006731
Herpes_TAF50 Herpesvirus transcription activation factor (transactivator) PF03326 IPR004998
Herpes_teg_N Herpesvirus tegument protein, N-terminal conserved region PF04843 IPR006928
Herpes_TK Thymidine kinase from herpesvirus PF00693 IPR001889
Herpes_TK_C Thymidine kinase from Herpesvirus C-terminal PF08465 IPR013672
Herpes_U15 Human herpesvirus U15 protein PF05613 IPR008644
Herpes_U26 Human herpesvirus U26 protein PF07402 IPR009980
Herpes_U30 Herpes virus tegument protein U30 PF04523 IPR007611
Herpes_U34 Herpesvirus virion protein U34 PF04541 IPR007626
Herpes_U44 Herpes virus U44 protein PF04533 IPR007619
Herpes_U47 Herpesvirus glycoprotein U47 PF05467 IPR008645
Herpes_U5 Herpesvirus U5-like family PF05999 IPR010302
Herpes_U55 Human herpesvirus U55 protein PF06501 IPR009479
Herpes_U59 Herpesvirus U59 protein PF04529 IPR007616
Herpes_UL1 Herpesvirus glycoprotein L PF05259 IPR007923
Herpes_UL14 Herpesvirus UL14-like protein PF03580 IPR005207
Herpes_UL16 Herpesvirus UL16/UL94 family PF03044 IPR004286
Herpes_UL17 Herpesvirus UL17 protein PF04559 IPR007640
Herpes_UL20 Herpesvirus egress protein UL20 PF04544 IPR007629
Herpes_UL21 Herpesvirus UL21 PF03252 IPR004936
Herpes_UL24 Herpes virus protein UL24 PF01646 IPR002580
Herpes_UL25 Herpesvirus UL25 family PF01499 IPR002493
Herpes_UL3 Herpesvirus UL3 protein PF03369 IPR005035
Herpes_UL31 Herpesvirus UL31-like protein PF02718 IPR021152
Herpes_UL32 Herpesvirus large structural phosphoprotein UL32 PF06070 IPR010340
Herpes_UL33 Herpesvirus UL33-like protein PF03581 IPR005208
Herpes_UL34 Herpesvirus UL34-like protein PF03582
Herpes_UL35 Herpesvirus UL35 family PF04496 IPR007584
Herpes_UL36 Herpesvirus UL36 tegument protein PF03586 IPR005210
Herpes_UL37_1 Herpesvirus UL37 tegument protein PF03970 IPR005655
Herpes_UL37_2 Betaherpesvirus immediate-early glycoprotein UL37 PF07413 IPR010880
Herpes_UL4 Herpesvirus UL4 family PF03277 IPR004958
Herpes_UL42 DNA polymerase processivity factor (UL42) PF02282 IPR003202
Herpes_UL43 Herpesvirus UL43 protein PF05072 IPR007764
Herpes_UL45 UL45 protein PF05473 IPR008646
Herpes_UL46 Herpesvirus UL46 protein PF03387 IPR005051
Herpes_UL47 Herpesvirus UL47 protein PF03362 IPR005029
Herpes_UL49_1 UL49 family PF03117 IPR004339
Herpes_UL49_2 Herpesvirus UL49 tegument protein PF04823 IPR006908
Herpes_UL49_5 Herpesvirus UL49.5 envelope/tegument protein PF05702 IPR008647
Herpes_UL51 Herpesvirus UL51 protein PF04540 IPR007625
Herpes_UL52 Herpesviridae UL52/UL70 DNA primase PF03121 IPR004340
Herpes_UL55 Herpesvirus UL55 protein PF04537 IPR007622
Herpes_UL56 Herpesvirus UL56 protein PF04534 IPR007620
Herpes_UL6 Herpesvirus UL6 like PF01763 IPR002660
Herpes_UL69 Herpesvirus transcriptional regulator family PF05459 IPR008648
Herpes_UL7 Herpesvirus UL7 like PF01677 IPR002600
Herpes_UL73 UL73 viral envelope glycoprotein PF03554 IPR005211
Herpes_UL74 Herpes UL74 glycoproteins PF07982 IPR012564
Herpes_UL79 UL79 family PF03049 IPR004290
Herpes_UL82_83 Betaherpesvirus UL82/83 protein N terminus PF05784 IPR008649
Herpes_UL87 Herpesvirus UL87 family PF03043 IPR004285
Herpes_UL92 UL92 family PF03048 IPR004289
Herpes_UL95 UL95 family PF03038 IPR004280
Herpes_US12 Herpesvirus US12 family PF05363 IPR008026
Herpes_US9 Alphaherpesvirus tegument protein US9 PF06072 IPR009278
Herpes_V23 Herpesvirus VP23 like capsid protein PF01802 IPR002690
Herpes_VP19C Herpesvirus capsid shell protein VP19C PF03327 IPR004999
HET Heterokaryon incompatibility protein (HET) PF06985 IPR010730
Het-C Heterokaryon incompatibility protein Het-C PF07217 IPR010816
HEV_ORF1 Hepatitis E virus ORF-2 (Putative capsid protein) PF02444 IPR003384
Hexapep Bacterial transferase hexapeptide (three repeats) PF00132 IPR001451
Hexokinase_1 Hexokinase PF00349 IPR022672
Hexokinase_2 Hexokinase PF03727 IPR022673
Hexose_dehydrat NDP-hexose 2,3-dehydratase PF03559 IPR005212
Hex_IIIa Hexon-associated protein (IIIa) PF02455 IPR003479
He_PIG Putative Ig domain PF05345 IPR008009
He_PIG_assoc He_PIG associated, NEW1 domain of bacterial glycohydrolase PF10632 IPR019599
HGD-D 2-hydroxyglutaryl-CoA dehydratase, D-component PF06050 IPR010327
HgmA homogentisate 1,2-dioxygenase PF04209 IPR005708
HGTP_anticodon Anticodon binding domain PF03129 IPR004154
HGWP HGWP repeat PF03578 IPR005213
HHA Haemolysin expression modulating protein PF05321 IPR007985
HHH Helix-hairpin-helix motif PF00633 IPR000445
HhH-GPD HhH-GPD superfamily base excision DNA repair protein PF00730 IPR003265
HHV6-IE Human herpesvirus 6 immediate early protein PF03753 IPR005507
HH_signal Hedgehog amino-terminal signalling domain PF01085 IPR000320
HI0933_like HI0933-like protein PF03486 IPR004792
HicB HicB family PF05534 IPR008651
Hid1 High-temperature-induced dauer-formation protein PF09760
HIF-1a_CTAD HIF-1 alpha C terminal transactivation domain PF08778 IPR014887
HIG_1_N Hypoxia induced protein conserved region PF04588 IPR007667
HIM Haemagglutinin PF05662 IPR008635
HIM1 HIM1 PF08732 IPR014843
HIN HIN-200/IF120x domain PF02760 IPR004021
Hin1 Harpin-induced protein 1 (Hin1) PF07320
Hint Hint module PF01079 IPR001767
HipA_C HipA-like C-terminal domain PF07804 IPR012893
HipA_N HipA-like N-terminal domain PF07805 IPR012894
HIPIP High potential iron-sulfur protein PF01355 IPR000170
Hira TUP1-like enhancer of split PF07569 IPR011494
HIRAN HIRAN domain PF08797 IPR014905
HIRA_B HIRA B motif PF09453 IPR019015
Hirudin Hirudin PF00713 IPR000429
HisG ATP phosphoribosyltransferase PF01634 IPR013820
HisG_C HisG, C-terminal domain PF08029 IPR013115
HisKA His Kinase A (phosphoacceptor) domain PF00512 IPR003661
HisKA_2 Histidine kinase PF07568 IPR011495
HisKA_3 Histidine kinase PF07730 IPR011712
HisK_N Histidine kinase N terminal PF09385 IPR018984
Histidinol_dh Histidinol dehydrogenase PF00815 IPR012131
Histone Core histone H2A/H2B/H3/H4 PF00125 IPR007125
Histone_HNS H-NS histone family PF00816 IPR001801
Hist_deacetyl Histone deacetylase domain PF00850 IPR000286
Hist_Kin_Sens Predicted histidine kinase sensor domain PF10114 IPR018771
Hist_rich_Ca-bd Histidine-rich Calcium-binding repeat region PF10529 IPR019552
His_binding Tick histamine binding protein PF02098
His_biosynth Histidine biosynthesis protein PF00977 IPR006062
His_kinase Histidine kinase PF06580 IPR010559
His_leader Histidine operon leader peptide PF08047 IPR012565
HIT HIT domain PF01230 IPR001310
Hjc Archaeal holliday junction resolvase (hjc) PF01870 IPR002732
HK Hydroxyethylthiazole kinase family PF02110 IPR000417
HLH Helix-loop-helix DNA-binding domain PF00010 IPR001092
HlyC RTX toxin acyltransferase family PF02794 IPR003996
HlyD HlyD family secretion protein PF00529 IPR006143
HlyE Haemolysin E (HlyE) PF06109 IPR010356
HlyIII Haemolysin-III related PF03006 IPR004254
HlyU Transcriptional activator HlyU PF10115 IPR018772
HMA Heavy-metal-associated domain PF00403 IPR006121
HMD H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase PF03201 IPR004889
HMG-CoA_red Hydroxymethylglutaryl-coenzyme A reductase PF00368 IPR002202
HMG14_17 HMG14 and HMG17 PF01101 IPR000079
HMGL-like HMGL-like PF00682 IPR000891
HMG_box HMG (high mobility group) box PF00505 IPR000910
HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal PF08540 IPR013746
HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal PF01154 IPR013528
HN Hemagglutinin-neuraminidase PF00423 IPR000665
HNF-1A_C Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus PF04813 IPR006898
HNF-1B_C Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus PF04812 IPR006897
HNF-1_N Hepatocyte nuclear factor 1 (HNF-1), N terminus PF04814 IPR006899
HNF_C HNF3 C-terminal domain PF09354 IPR018533
HNH HNH endonuclease PF01844 IPR002711
HNOB Heme NO binding PF07700 IPR011644
HNOBA Heme NO binding associated PF07701 IPR011645
HOK_GEF Hok/gef family PF01848 IPR000021
Holin_BlyA holin, BlyA family PF05102 IPR006493
Holin_LLH Phage holin protein (Holin_LLH) PF09682 IPR010026
Homeobox Homeobox domain PF00046 IPR001356
Homoserine_dh Homoserine dehydrogenase PF00742 IPR001342
Homo_sperm_syn Homospermidine synthase PF06408
Hom_end Homing endonuclease PF05204 IPR007869
Hom_end_hint Hom_end-associated Hint PF05203 IPR007868
HOOK HOOK protein PF05622
HopJ HopJ type III effector protein PF08888 IPR014984
HORMA HORMA domain PF02301 IPR003511
Hormone_1 Somatotropin hormone family PF00103 IPR001400
Hormone_2 Peptide hormone PF00123 IPR000532
Hormone_3 Pancreatic hormone peptide PF00159 IPR001955
Hormone_4 Neurohypophysial hormones, N-terminal Domain PF00220 IPR022423
Hormone_5 Neurohypophysial hormones, C-terminal Domain PF00184 IPR000981
Hormone_6 Glycoprotein hormone PF00236 IPR000476
Hormone_recep Ligand-binding domain of nuclear hormone receptor PF00104 IPR000536
Host_attach Protein required for attachment to host cells PF10116 IPR019291
Hox9_act Hox9 activation region PF04617 IPR006711
Hp0062 Bacterial protein of unknown function PF09647
HpaB 4-hydroxyphenylacetate 3-hydroxylase family PF03241 IPR004925
HpaP Type III secretion protein (HpaP) PF09483 IPR013390
HPC2 Histone promoter control 2 (HPC2) PF08729 IPR014840
HpcH_HpaI HpcH/HpaI aldolase/citrate lyase family PF03328 IPR005000
HPP HPP family PF04982 IPR007065
HPPK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PF01288 IPR000550
Hpre_diP_synt_I Heptaprenyl diphosphate synthase component I PF07456 IPR010898
Hpr_kinase_C HPr Serine kinase C-terminus PF07475 IPR011104
Hpr_kinase_N HPr Serine kinase N terminus PF02603 IPR011126
Hpt Hpt domain PF01627 IPR008207
HP_OMP Helicobacter outer membrane protein PF01856 IPR002718
HP_OMP_2 Putative outer membrane protein PF02521 IPR003678
HR1 Hr1 repeat PF02185 IPR000861
HrcA HrcA protein C terminal domain PF01628 IPR021153
HRDC HRDC domain PF00570 IPR002121
HRM Hormone receptor domain PF02793 IPR001879
HRP1 THO complex subunit HPR1 PF09433 IPR018558
HrpA_pilin HrpA pilus formation protein PF09589 IPR018581
HrpB1_HrpK Bacterial type III secretion protein (HrpB1_HrpK) PF09613 IPR013394
HrpB2 Bacterial type III secretion protein (HrpB2) PF09487 IPR013391
HrpB4 Bacterial type III secretion protein (HrpB4) PF09502 IPR013393
HrpB7 Bacterial type III secretion protein (HrpB7) PF09486 IPR013392
HrpB_C ATP-dependent helicase C-terminal PF08482 IPR013689
HrpE HrpE protein PF06188 IPR009335
HrpF HrpF protein PF06266 IPR009371
HrpJ Hypersensitivity response secretion protein HrpJ PF07201 IPR010812
HrpZ HrpZ PF04877 IPR006961
HR_lesion HR-like lesion-inducing PF05514 IPR008637
Hs1pro-1_C Hs1pro-1 protein C-terminus PF07014 IPR009743
Hs1pro-1_N Hs1pro-1 N-terminus PF07231 IPR009869
HS1_rep Repeat in HS1/Cortactin PF02218 IPR003134
HS2ST Heparan sulfate 2-O-sulfotransferase (HS2ST) PF05040
HS6ST Heparan sulfate 6-sulfotransferase (HS6ST) PF06765
HSA HSA PF07529 IPR006562
HSBP1 Heat shock factor binding protein 1 PF06825 IPR009643
HSCB_C HSCB C-terminal oligomerisation domain PF07743 IPR009073
HSDR_N Type I restriction enzyme R protein N terminus (HSDR_N) PF04313 IPR007409
HSF_DNA-bind HSF-type DNA-binding PF00447 IPR000232
HSL_N Hormone-sensitive lipase (HSL) N-terminus PF06350 IPR010468
HSP20 Hsp20/alpha crystallin family PF00011 IPR002068
HSP33 Hsp33 protein PF01430 IPR000397
HSP70 Hsp70 protein PF00012 IPR013126
HSP90 Hsp90 protein PF00183 IPR020576
HSP9_HSP12 Heat shock protein 9 / 12 PF04119 IPR007250
HtaA Htaa PF04213 IPR007331
HTH_1 Bacterial regulatory helix-turn-helix protein, lysR family PF00126 IPR000847
HTH_10 HTH DNA binding domain PF04967 IPR007050
HTH_11 HTH domain PF08279 IPR013196
HTH_12 Ribonuclease R winged-helix domain PF08461 IPR013668
HTH_3 Helix-turn-helix PF01381 IPR001387
HTH_5 Bacterial regulatory protein, arsR family PF01022 IPR001845
HTH_6 Helix-turn-helix domain, rpiR family PF01418 IPR000281
HTH_7 Helix-turn-helix domain of resolvase PF02796 IPR006120
HTH_8 Bacterial regulatory protein, Fis family PF02954 IPR002197
HTH_9 RNA polymerase III subunit RPC82 helix-turn-helix domain PF08221 IPR013197
HTH_AraC Bacterial regulatory helix-turn-helix proteins, AraC family PF00165 IPR000005
HTH_CodY CodY helix-turn-helix domain PF08222 IPR013198
HTH_DeoR DeoR-like helix-turn-helix domain PF08220 IPR001034
HTH_IclR IclR helix-turn-helix domain PF09339 IPR005471
HTH_Mga M protein trans-acting positive regulator (MGA) HTH domain PF08280 IPR013199
HTH_psq helix-turn-helix, Psq domain PF05225 IPR007889
HTH_WhiA Sporulation Regulator WhiA C terminal domain PF02650 IPR003802
HtpX_N HtpX N-terminus PF06509
HtrL_YibB Bacterial protein of unknown function (HtrL_YibB) PF09612 IPR011735
HTS Homoserine O-succinyltransferase PF04204 IPR005697
Hum_adeno_E3A Human adenovirus early E3A glycoprotein PF05393
HupE_UreJ HupE / UreJ protein PF04955 IPR007038
HupF_HypC HupF/HypC family PF01455 IPR001109
HupH_C HupH hydrogenase expression protein, C-terminal conserved region PF04809 IPR006894
Hus1 Hus1-like protein PF04005 IPR007150
HutD HutD PF05962 IPR010282
HutP HutP PF09021 IPR015111
HVSL Uncharacterised conserved protein PF09749 IPR019146
HWE_HK HWE histidine kinase PF07536 IPR011102
HXXSHH Protein of unknown function (DUF1552) PF07586 IPR011447
HyaE Hydrogenase-1 expression protein HyaE PF07449 IPR010893
Hyaluronidase_1 Hyaluronidase protein (HylP) PF07212 IPR009860
Hyccin Hyccin PF09790 IPR018619
HycH Formate hydrogenlyase maturation protein HycH PF07450 IPR010005
HycI Hydrogenase maturation protease PF01750 IPR000671
Hydantoinase_A Hydantoinase/oxoprolinase PF01968 IPR002821
Hydantoinase_B Hydantoinase B/oxoprolinase PF02538 IPR003692
Hydant_A_N Hydantoinase/oxoprolinase N-terminal region PF05378 IPR008040
Hydrolase haloacid dehalogenase-like hydrolase PF00702 IPR005834
Hydrolase_2 Cell Wall Hydrolase PF07486 IPR011105
Hydrolase_3 haloacid dehalogenase-like hydrolase PF08282 IPR013200
Hydrophobin Fungal hydrophobin PF01185 IPR001338
Hydrophobin_2 Fungal hydrophobin PF06766 IPR010636
Hyd_WA Propeller PF06462 IPR006624
HypA Hydrogenase expression/synthesis hypA family PF01155 IPR000688
HypD Hydrogenase formation hypA family PF01924 IPR002780
Hypoth_Ymh Protein of unknown function (Hypoth_ymh) PF09509 IPR012654
HYR HYR domain PF02494 IPR003410
H_lectin H-type lectin domain PF09458 IPR019019
H_PPase Inorganic H+ pyrophosphatase PF03030 IPR004131
I-set Immunoglobulin I-set domain PF07679 IPR013098
IalB Invasion associated locus B (IalB) protein PF06776 IPR010642
IATP Mitochondrial ATPase inhibitor, IATP PF04568 IPR007648
IBB Importin beta binding domain PF01749 IPR002652
IBD Transcription-initiator DNA-binding domain IBD PF10416 IPR018845
IBN_N Importin-beta N-terminal domain PF03810 IPR001494
IBR IBR domain PF01485 IPR002867
IBV_3A IBV 3A protein PF03617 IPR005214
IBV_3B IBV 3B protein PF03622 IPR005295
IBV_3C IBV 3C protein PF03620 IPR005296
ICA69 Islet cell autoantigen ICA69, C-terminal domain PF04629 IPR006723
ICAM_N Intercellular adhesion molecule (ICAM), N-terminal domain PF03921 IPR013768
ICAP-1_inte_bdg Beta-1 integrin binding protein PF10480 IPR019517
ICAT Beta-catenin-interacting protein ICAT PF06384 IPR009428
ICE2 ICE2 PF08426 IPR013635
ICEA ICEA Protein PF05315 IPR007979
IceA2 Helicobacter pylori IceA2 protein PF05862 IPR008655
Ice_nucleation Ice nucleation protein repeat PF00818 IPR000258
ICL Isocitrate lyase family PF00463 IPR000918
ICln_channel Nucleotide-sensitive chloride conductance regulator (ICln) PF03517
IclR Bacterial transcriptional regulator PF01614 IPR014757
IcmF-related Intracellular multiplication and human macrophage-killing PF06761 IPR009612
ICMT Isoprenylcysteine carboxyl methyltransferase (ICMT) family PF04140 IPR007269
ICP Domain of unknown function PF10314
IDEAL IDEAL domain PF08858 IPR014957
IDH Monomeric isocitrate dehydrogenase PF03971 IPR004436
IDO Indoleamine 2,3-dioxygenase PF01231 IPR000898
IER Immediate early response protein (IER) PF05760 IPR008653
IF-2B Initiation factor 2 subunit family PF01008 IPR000649
IF2_assoc Bacterial translation initiation factor IF-2 associated region PF08364 IPR013575
IF2_N Translation initiation factor IF-2, N-terminal region PF04760 IPR006847
IF3_C Translation initiation factor IF-3, C-terminal domain PF00707 IPR019815
IF3_N Translation initiation factor IF-3, N-terminal domain PF05198 IPR019814
IF4E Eukaryotic initiation factor 4E PF01652 IPR001040
Ifi-6-16 Interferon-induced 6-16 family PF06140 IPR009311
IFN-gamma Interferon gamma PF00714 IPR002069
IFNGR1 Interferon gamma receptor alpha chain (IFNGR1) PF07140 IPR021126
IFP_35_N Interferon-induced 35 kDa protein (IFP 35) N-terminus PF07334 IPR009938
IFRD Interferon-related developmental regulator (IFRD) PF05004 IPR007701
IFRD_C Interferon-related protein conserved region PF04836 IPR006921
IFT57 Intra-flagellar transport protein 57 PF10498 IPR019530
IF_tail Intermediate filament tail domain PF00932 IPR001322
ig Immunoglobulin domain PF00047 IPR013151
IgaA Intracellular growth attenuator protein IgaA PF07095 IPR010771
IGF2_C Insulin-like growth factor II E-peptide PF08365 IPR013576
IGFBP Insulin-like growth factor binding protein PF00219 IPR000867
IgG_binding_B B domain PF01378 IPR000724
IGPD Imidazoleglycerol-phosphate dehydratase PF00475 IPR000807
IGPS Indole-3-glycerol phosphate synthase PF00218 IPR013798
IGR IGR protein motif PF09597 IPR019083
Ig_Tie2_1 Tie-2 Ig-like domain 1 PF10430 IPR018941
IIGP Interferon-inducible GTPase (IIGP) PF05049 IPR007743
IKI3 IKI3 family PF04762 IPR006849
IL1 Interleukin-1 / 18 PF00340 IPR000975
IL10 Interleukin 10 PF00726 IPR020443
IL10Ra-bind Interleukin-10 receptor alpha chain PF10402
IL11 Interleukin 11 PF07400 IPR020438
IL12 Interleukin-12 alpha subunit PF03039 IPR004281
IL12p40_C Cytokine interleukin-12p40 C-terminus PF10420 IPR019482
IL13 Interleukin-13 PF03487 IPR020418
IL15 Interleukin 15 PF02372 IPR003443
IL17 Interleukin-17 PF06083 IPR010345
IL1_propep Interleukin-1 propeptide PF02394 IPR003502
IL2 Interleukin 2 PF00715 IPR000779
IL3 Interleukin-3 PF02059 IPR002183
IL4 Interleukin 4 PF00727 IPR002354
IL4Ra_N Interleukin-4 receptor alpha chain, N-terminal PF09238 IPR015319
IL5 Interleukin 5 PF02025 IPR000186
IL6 Interleukin-6/G-CSF/MGF family PF00489 IPR003573
IL6Ra-bind Interleukin-6 receptor alpha chain, binding PF09240 IPR015321
IL7 Interleukin 7/9 family PF01415 IPR000226
IL8 Small cytokines (intecrine/chemokine), interleukin-8 like PF00048 IPR001811
Ilar_coat Ilarvirus coat protein PF01787 IPR002681
Ilm1 Increased loss of mitochondrial DNA protein 1 PF10311 IPR018815
IlvB_leader IlvB leader peptide PF08049 IPR012566
IlvC Acetohydroxy acid isomeroreductase, catalytic domain PF01450 IPR000506
ILVD_EDD Dehydratase family PF00920 IPR000581
IlvGEDA_leader IlvGEDA operon leader peptide PF08046 IPR012567
IlvN Acetohydroxy acid isomeroreductase, catalytic domain PF07991 IPR013116
IMD IRSp53/MIM homology domain PF08397 IPR013606
Img2 Mitochondrial large subunit ribosomal protein (Img2) PF05046 IPR007740
Imp-YgjV Bacterial inner membrane protein PF10688 IPR019629
ImpA-rel_N ImpA-related N-terminal PF06812 IPR010657
IMPDH IMP dehydrogenase / GMP reductase domain PF00478 IPR001093
ImpE ImpE protein PF07024 IPR009211
IMP_cyclohyd IMP cyclohydrolase-like protein PF07826 IPR020600
IMS impB/mucB/samB family PF00817 IPR001126
IMS-faced Intermembrane space-Faced domain of Tom22 PF10485
IncA IncA protein PF04156 IPR007285
INCENP_ARK-bind Inner centromere protein, ARK binding region PF03941 IPR005635
IncFII_repA IncFII RepA protein family PF02387 IPR003446
Indigoidine_A Indigoidine synthase A like protein PF04227 IPR007342
Inh Protease inhibitor Inh PF02974 IPR021140
Inhibitor_I24 PinA peptidase inhibitor PF10465 IPR019506
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) PF08246 IPR013201
Inhibitor_I34 Saccharopepsin inhibitor I34 PF10466 IPR019507
Inhibitor_I36 Peptidase inhibitor family I36 PF03995 IPR007141
Inhibitor_I48 Peptidase inhibitor clitocypin PF10467 IPR019508
Inhibitor_I68 Carboxypeptidase inhibitor I68 PF10468 IPR019509
Inhibitor_I9 Peptidase inhibitor I9 PF05922 IPR010259
Init_tRNA_PT Initiator tRNA phosphoribosyl transferase PF04179 IPR007306
Innexin Innexin PF00876 IPR000990
Inos-1-P_synth Myo-inositol-1-phosphate synthase PF01658 IPR013021
Inositol_P Inositol monophosphatase family PF00459 IPR000760
Ins134_P3_kin Inositol 1, 3, 4-trisphosphate 5/6-kinase PF05770 IPR008656
Ins145_P3_rec Inositol 1,4,5-trisphosphate/ryanodine receptor PF08709 IPR014821
INSIG Insulin-induced protein (INSIG) PF07281
Insulin Insulin/IGF/Relaxin family PF00049 IPR016179
Ins_allergen_rp Insect allergen related repeat PF06757 IPR010629
Ins_beta Nematode insulin-related peptide beta type PF03488 IPR003235
Ins_element1 Insertion element protein PF03811 IPR003220
Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase PF06090 IPR009286
Integrase Integrase DNA binding domain PF00552 IPR001037
Integrase_DNA DNA binding domain of tn916 integrase PF02920 IPR004191
Integrase_Zn Integrase Zinc binding domain PF02022 IPR003308
Integrin_alpha Integrin alpha cytoplasmic region PF00357 IPR013513
Integrin_alpha2 Integrin alpha PF08441 IPR013649
Integrin_beta Integrin, beta chain PF00362 IPR002369
Integrin_b_cyt Integrin beta cytoplasmic domain PF08725 IPR014836
Integrin_B_tail Integrin beta tail domain PF07965 IPR012896
Interfer-bind Interferon-alpha/beta receptor, fibronectin type III PF09294 IPR015373
Interferon Interferon alpha/beta domain PF00143 IPR000471
Intg_mem_TP0381 Integral membrane protein (intg_mem_TP0381) PF09529 IPR011737
Intimin_C Intimin C-type lectin domain PF07979 IPR013117
Intron_maturas2 Type II intron maturase PF01348 IPR000442
Invasin_D3 Invasin, domain 3 PF09134 IPR015217
Invas_B Salmonella/Shigella invasin protein B PF03518
Invas_SpaK Invasion protein B family PF03519 IPR003065
InvE InvE invasion protein PF02523
Invertase_neut Plant neutral invertase PF04853 IPR006937
InvH InvH outer membrane lipoprotein PF04741 IPR006830
Involucrin Involucrin repeat PF00904 IPR000354
Involucrin2 Involucrin PF06994 IPR009733
Involucrin_N Involucrin of squamous epithelia N-terminus PF10583 IPR019571
IolB Myo-inositol catabolism protein IolB PF06845
Ion_trans Ion transport protein PF00520 IPR005821
Ion_trans_2 Ion channel PF07885 IPR013099
Ion_trans_N Ion transport protein N-terminal PF08412 IPR013621
IpaB_EvcA IpaB/EvcA family PF03278 IPR004959
IpaC_SipC Salmonella-Shigella invasin protein C (IpaC_SipC) PF09599 IPR005427
IpaD Invasion plasmid antigen IpaD PF06511 IPR009483
IpgD Enterobacterial virulence protein IpgD PF05925 IPR008108
iPGM_N BPG-independent PGAM N-terminus (iPGM_N) PF06415 IPR011258
IPK Inositol polyphosphate kinase PF03770 IPR005522
IPP-2 Protein phosphatase inhibitor 2 (IPP-2) PF04979 IPR007062
IPPT IPP transferase PF01715 IPR002627
IPT Isopentenyl transferase PF01745
IP_trans Phosphatidylinositol transfer protein PF02121 IPR001666
IQ IQ calmodulin-binding motif PF00612 IPR000048
IRF Interferon regulatory factor transcription factor PF00605 IPR001346
IRF-3 Interferon-regulatory factor 3 PF10401 IPR019471
IRK Inward rectifier potassium channel PF01007 IPR013521
IRK_N Inward rectifier potassium channel N-terminal PF08466 IPR013673
Iron_permease Low affinity iron permease PF04120 IPR007251
Iron_traffic Bacterial Fe(2+) trafficking PF04362 IPR007457
Iron_transport Fe2+ transport protein PF10634 IPR018470
IRS PTB domain (IRS-1 type) PF02174 IPR002404
ISAV_HA Infectious salmon anaemia virus haemagglutinin PF06215 IPR010408
Ish1 Putative stress-responsive nuclear envelope protein PF10281 IPR018803
ISK_Channel Slow voltage-gated potassium channel PF02060 IPR000369
ISN1 IMP-specific 5'-nucleotidase PF06437 IPR009453
Isochorismatase Isochorismatase family PF00857 IPR000868
Iso_dh Isocitrate/isopropylmalate dehydrogenase PF00180 IPR001804
IspA Intracellular septation protein A PF04279 IPR006008
IspD Uncharacterized protein family UPF0007 PF01128 IPR001228
IstB IstB-like ATP binding protein PF01695 IPR002611
IstB_N IstB-like ATP binding N-terminal PF08483 IPR013690
Isy1 Isy1-like splicing family PF06246 IPR009360
ITAM Immunoreceptor tyrosine-based activation motif PF02189 IPR003110
ITAM_Cys-rich Immunoreceptor tyrosine-based activation motif PF10538 IPR012316
ITI_HC_C Inter-alpha-trypsin inhibitor heavy chain C-terminus PF06668 IPR010600
IucA_IucC IucA / IucC family PF04183 IPR007310
IU_nuc_hydro Inosine-uridine preferring nucleoside hydrolase PF01156 IPR001910
Ivy Inhibitor of vertebrate lysozyme (Ivy) PF08816 IPR014453
IWS1_C IWS1 C-terminus PF05909
I_LWEQ I/LWEQ domain PF01608 IPR002558
Jacalin Jacalin-like lectin domain PF01419 IPR001229
JHBP Haemolymph juvenile hormone binding protein (JHBP) PF06585 IPR010562
JmjC JmjC domain PF02373 IPR013129
JmjN jmjN domain PF02375 IPR003349
Jnk-SapK_ap_N JNK_SAPK-associated protein-1 PF09744 IPR019143
Josephin Josephin PF02099 IPR006155
JTB Jumping translocation breakpoint protein (JTB) PF05439 IPR008657
Jun Jun-like transcription factor PF03957 IPR005643
K-box K-box region PF01486 IPR002487
K-cyclin_vir_C K cyclin, C terminal PF09080 IPR015164
K1 K1 glycoprotein PF02960 IPR004121
K167R K167R (NUC007) repeat PF08065 IPR012568
KA1 Kinase associated domain 1 PF02149 IPR001772
KaiA KaiA domain PF07688 IPR011648
KaiA-binding KaiA binding PF09054
KaiB KaiB domain PF07689 IPR011649
KaiC KaiC PF06745 IPR014774
KAP Kinesin-associated protein (KAP) PF05804
KapB Kinase associated protein B PF08810 IPR014916
KAP_NTPase KAP family P-loop domain PF07693 IPR011646
KAR9 Yeast cortical protein KAR9 PF08580 IPR013889
KASH Nuclear envelope localisation domain PF10541 IPR012315
KAT11 H3 K56 histone acetylation protein KAT11 PF08214 IPR013178
Kazal_1 Kazal-type serine protease inhibitor domain PF00050 IPR002350
Kazal_2 Kazal-type serine protease inhibitor domain PF07648 IPR011497
KCl_Cotrans_1 K-Cl Co-transporter type 1 (KCC1) PF03522 IPR018491
KcnmB2_inactiv KCNMB2, ball and chain domain PF09303 IPR015382
KCNQ_channel KCNQ voltage-gated potassium channel PF03520 IPR013821
KdgM Oligogalacturonate-specific porin protein (KdgM) PF06178 IPR009331
KdgT 2-keto-3-deoxygluconate permease PF03812 IPR004684
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family PF06293 IPR010440
KdpA Potassium-transporting ATPase A subunit PF03814 IPR004623
KdpC K+-transporting ATPase, c chain PF02669 IPR003820
KdpD Osmosensitive K+ channel His kinase sensor domain PF02702 IPR003852
KduI 5-keto 4-deoxyuronate isomerase PF04962 IPR021120
Kelch_1 Kelch motif PF01344 IPR006652
Kelch_2 Kelch motif PF07646 IPR011498
Keratin Keratin PF02422 IPR003461
Keratin_assoc Keratinocyte-associated protein 2 PF09775 IPR018614
Keratin_B2 Keratin, high sulfur B2 protein PF01500 IPR002494
Keratin_matx Keratin, high-sulphur matrix protein PF04579 IPR007659
ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain PF00109 IPR014030
Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain PF02801 IPR014031
KGG Stress-induced bacterial acidophilic repeat motif PF10685 IPR019626
KGK KGK domain PF08872 IPR014971
KH_1 KH domain PF00013 IPR018111
KH_2 KH domain PF07650 IPR004044
KicB KicB killing factor PF03882 IPR005582
KID KID repeat PF02524 IPR003900
KilA-N KilA-N domain PF04383 IPR018004
Kin17_mid Domain of Kin17 curved DNA-binding protein PF10357 IPR019447
Kinesin Kinesin motor domain PF00225 IPR001752
Kinesin-related Kinesin-related PF06548 IPR010544
Kinin Insect kinin peptide PF08260 IPR013202
KIP1 KIP1-like protein PF07765 IPR011684
KIX KIX domain PF02172 IPR003101
KLRAQ Predicted coiled-coil domain-containing protein PF10205 IPR019343
KMP11 Kinetoplastid membrane protein 11 PF03037 IPR004132
KNOX1 KNOX1 domain PF03790 IPR005540
KNOX2 KNOX2 domain PF03791 IPR005541
KNTase_C KNTase C-terminal domain PF07827 IPR012481
KOG2701 Coiled-coil domain-containing protein (DUF2037) PF09762 IPR019159
KorB KorB domain PF08535 IPR013741
KorB_C KorB C-terminal beta-barrel domain PF06613 IPR010575
KOW KOW motif PF00467 IPR005824
Kp4 Kp4 PF09044 IPR015131
KR KR domain PF08659 IPR013968
KRAB KRAB box PF01352 IPR001909
KRE9 Yeast cell wall synthesis protein KRE9/KNH1 PF05390 IPR008659
Kri1 KRI1-like family PF05178 IPR007851
Kringle Kringle domain PF00051 IPR000001
KSHV_K8 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein PF07188 IPR010805
KTI12 Chromatin associated protein KTI12 PF08433 IPR013641
Ku Ku70/Ku80 beta-barrel domain PF02735 IPR006164
Kua-UEV1_localn Kua-ubiquitin conjugating enzyme hybrid localisation domain PF10520 IPR019547
Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain PF00014 IPR002223
Kunitz_legume Trypsin and protease inhibitor PF00197 IPR002160
Ku_C Ku70/Ku80 C-terminal arm PF03730 IPR005160
Ku_N Ku70/Ku80 N-terminal alpha/beta domain PF03731 IPR005161
Ku_PK_bind Ku C terminal domain like PF08785 IPR014893
Kv2channel Kv2 voltage-gated K+ channel PF03521 IPR003973
KWG KWG Leptospira PF07656 IPR011647
KxDL Uncharacterized conserved protein PF10241 IPR019371
K_channel_TID Potassium channel Kv1.4 tandem inactivation domain PF07941 IPR012897
K_tetra K+ channel tetramerisation domain PF02214 IPR003131
K_trans K+ potassium transporter PF02705 IPR003855
L-fibroin Fibroin light chain (L-fibroin) PF05849 IPR008660
L15 Ribosomal protein L15 PF00256
L1R_F9L Lipid membrane protein of large eukaryotic DNA viruses PF02442 IPR003472
L27 L27 domain PF02828 IPR014775
L27_1 L27_1 PF09058 IPR015143
L27_2 L27_2 PF09045 IPR015132
L27_N L27_N PF09060 IPR015145
L31 Mitochondrial ribosomal protein L31 PF09784 IPR016340
L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain PF05047 IPR007741
L6_membrane L6 membrane protein PF05805 IPR008661
L71 L71 family PF02448 IPR003475
La La domain PF05383 IPR006630
LA-virus_coat L-A virus, major coat protein PF09220 IPR015302
LAB_N Lipid A Biosynthesis N-terminal domain PF07578 IPR011499
LacAB_rpiB Ribose/Galactose Isomerase PF02502 IPR003500
LacI Bacterial regulatory proteins, lacI family PF00356 IPR000843
LACT Lecithin:cholesterol acyltransferase PF02450 IPR003386
Lact-deh-memb D-lactate dehydrogenase, membrane binding PF09330 IPR015409
Lactamase_B Metallo-beta-lactamase superfamily PF00753
Lactate_perm L-lactate permease PF02652 IPR003804
Lactococcin Lactococcin-like family PF04369 IPR007464
Lactococcin_972 Bacteriocin (Lactococcin_972) PF09683 IPR006540
Lact_bio_phlase Lacto-N-biose phosphorylase PF09508 IPR012711
LacY_symp LacY proton/sugar symporter PF01306
Lac_bphage_repr Lactococcus bacteriophage repressor PF06543 IPR009498
LAG1-DNAbind LAG1, DNA binding PF09271 IPR015351
LAGLIDADG_1 LAGLIDADG endonuclease PF00961 IPR001982
LAGLIDADG_2 LAGLIDADG DNA endonuclease family PF03161 IPR004860
LamB LamB porin PF02264 IPR003192
Lambda_Bor Bor protein PF06291 IPR010438
Lambda_CIII Lambda Phage CIII PF02061 IPR013056
Lambda_Kil Bacteriophage lambda Kil protein PF06301 IPR010444
Lambda_tail_I Bacteriophage lambda tail assembly protein I PF06805 IPR010654
LamB_YcsF LamB/YcsF family PF03746 IPR005501
Laminin_B Laminin B (Domain IV) PF00052 IPR000034
Laminin_EGF Laminin EGF-like (Domains III and V) PF00053 IPR002049
Laminin_G_1 Laminin G domain PF00054 IPR012679
Laminin_G_2 Laminin G domain PF02210 IPR012680
Laminin_I Laminin Domain I PF06008 IPR009254
Laminin_II Laminin Domain II PF06009 IPR010307
Laminin_N Laminin N-terminal (Domain VI) PF00055 IPR008211
Lamp Lysosome-associated membrane glycoprotein (Lamp) PF01299 IPR002000
Lamprin Lamprin PF06403 IPR009437
LANC_like Lanthionine synthetase C-like protein PF05147
Lant_dehyd_C Lantibiotic dehydratase, C terminus PF04738 IPR006827
Lant_dehyd_N Lantibiotic dehydratase, N terminus PF04737 IPR006826
LAP1C Lamina-associated polypeptide 1C (LAP1C) PF05609 IPR008662
Laps Learning-associated protein PF10169 IPR018784
Las1 Las1-like PF04031 IPR007174
Latarcin Latarcin precursor PF10279 IPR018802
Latexin Latexin PF06907 IPR009684
Late_protein_L1 L1 (late) protein PF00500 IPR002210
Late_protein_L2 Late Protein L2 PF00513 IPR000784
Latrophilin Latrophilin Cytoplasmic C-terminal region PF02354 IPR003334
LBP_BPI_CETP LBP / BPI / CETP family, N-terminal domain PF01273 IPR017942
LBP_BPI_CETP_C LBP / BPI / CETP family, C-terminal domain PF02886 IPR001124
LBR_tudor Lamin-B receptor of TUDOR domain PF09465 IPR019023
LCCL LCCL domain PF03815 IPR004043
LCD1 DNA damage checkpoint protein PF09798 IPR018622
LCM Leucine carboxyl methyltransferase PF04072 IPR007213
LcrG LcrG protein PF07216 IPR009863
LcrR Type III secretion system regulator (LcrR) PF09621
LcrV V antigen (LcrV) protein PF04792 IPR005413
Ldh_1_C lactate/malate dehydrogenase, alpha/beta C-terminal domain PF02866 IPR022383
Ldh_1_N lactate/malate dehydrogenase, NAD binding domain PF00056 IPR001236
Ldh_2 Malate/L-lactate dehydrogenase PF02615 IPR003767
Ldl_recept_a Low-density lipoprotein receptor domain class A PF00057
Ldl_recept_b Low-density lipoprotein receptor repeat class B PF00058 IPR000033
Leader_CPA1 arg-2/CPA1 leader peptide PF08252 IPR013203
Leader_Erm Erm Leader peptide PF08253 IPR013204
Leader_Thr Threonine leader peptide PF08254 IPR011720
Leader_Trp Trp-operon Leader Peptide PF08255 IPR013205
LEAP-2 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) PF07359 IPR009955
LEA_1 Late embryogenesis abundant (LEA) group 1 PF03760 IPR005513
LEA_2 Late embryogenesis abundant protein PF03168 IPR004864
LEA_3 Late embryogenesis abundant protein PF03242 IPR004926
LEA_4 Late embryogenesis abundant protein PF02987 IPR004238
LEA_5 Small hydrophilic plant seed protein PF00477 IPR000389
LEA_6 Late embryogenesis abundant protein 18 PF10714 IPR018930
Lectin_C Lectin C-type domain PF00059 IPR001304
Lectin_leg-like Legume-like lectin family PF03388 IPR005052
Lectin_legB Legume lectin domain PF00139 IPR001220
Lectin_N Hepatic lectin, N-terminal domain PF03954 IPR005640
LEF-4 Late expression factor 4 (LEF-4) PF05098 IPR007790
LEF-8 Late expression factor 8 (LEF-8) PF04941 IPR007025
LEF-9 Late expression factor 9 (LEF-9) PF05094 IPR007786
Legionella_OMP Legionella pneumophila major outer membrane protein precursor PF05150 IPR007825
LEH Limonene-1,2-epoxide hydrolase catalytic domain PF07858 IPR013100
LEM LEM domain PF03020 IPR003887
LemA LemA family PF04011 IPR007156
Lem_TRP Leucophaea maderae tachykinin-related peptide PF08262 IPR013206
Lentiviral_Tat Lentiviral Tat protein PF02998 IPR004247
Lentivirus_VIF Lentivirus virion infectivity factor (VIF) PF05851 IPR008668
Lenti_VIF_2 Bovine Lentivirus VIF protein PF07401 IPR009979
Leo1 Leo1-like protein PF04004 IPR007149
LepA_C GTP-binding protein LepA C-terminus PF06421 IPR013842
Leptin Leptin PF02024 IPR000065
Lep_receptor_Ig Ig-like C2-type domain PF06328 IPR010457
LETM1 LETM1-like protein PF07766 IPR011685
LeuA_dimer LeuA allosteric (dimerisation) domain PF08502 IPR013709
Leuk-A4-hydro_C Leukotriene A4 hydrolase, C-terminal PF09127 IPR015211
Leukocidin Leukocidin/Hemolysin toxin family PF07968 IPR001340
Leu_leader Leucine operon leader peptide PF08054 IPR012570
Leu_Phe_trans Leucyl/phenylalanyl-tRNA protein transferase PF03588 IPR004616
Levi_coat Levivirus coat protein PF01819 IPR002703
LexA_DNA_bind LexA DNA binding domain PF01726 IPR006199
Lg106 Lg106-like protein PF07844
LGFP LGFP repeat PF08310 IPR013207
Lgl_C Lethal giant larvae(Lgl) like, C-terminal PF08596 IPR013905
LGT Prolipoprotein diacylglyceryl transferase PF01790 IPR001640
LHC Antenna complex alpha/beta subunit PF00556 IPR000066
LicD LICD Protein Family PF04991 IPR007074
LIF_OSM LIF / OSM family PF01291 IPR001581
LigA Aromatic-ring-opening dioxygenase LigAB, LigA subunit PF07746 IPR011986
Ligase_CoA CoA-ligase PF00549 IPR005811
LigB Catalytic LigB subunit of aromatic ring-opening dioxygenase PF02900 IPR004183
Lig_chan Ligand-gated ion channel PF00060 IPR001320
Lig_chan-Glu_bd Ligated ion channel L-glutamate- and glycine-binding site PF10613 IPR019594
LIM LIM domain PF00412 IPR001781
LIM_bind LIM-domain binding protein PF01803 IPR002691
Lin0512_fam Conserved hypothetical protein (Lin0512_fam) PF09585 IPR011719
Linker_histone linker histone H1 and H5 family PF00538 IPR005818
Linocin_M18 Linocin_M18 bacteriocin protein PF04454 IPR007544
LIP Secretory lipase PF03583 IPR005152
Lipase Lipase PF00151 IPR013818
Lipase3_N Lipase 3 N-terminal region PF03893 IPR005592
Lipase_2 Lipase (class 2) PF01674 IPR002918
Lipase_3 Lipase (class 3) PF01764 IPR002921
Lipase_chap Proteobacterial lipase chaperone protein PF03280 IPR004961
Lipase_GDSL GDSL-like Lipase/Acylhydrolase PF00657 IPR001087
Lipid_DES Sphingolipid Delta4-desaturase (DES) PF08557 IPR013866
Lipin_N lipin, N-terminal conserved region PF04571 IPR007651
Lipocalin Lipocalin / cytosolic fatty-acid binding protein family PF00061 IPR000566
Lipocalin_2 Lipocalin-like domain PF08212 IPR013208
Lipoprotein_1 Borrelia lipoprotein PF00820 IPR001809
Lipoprotein_10 Putative mycoplasma lipoprotein, C-terminal region PF03202 IPR004890
Lipoprotein_11 Lepidopteran low molecular weight (30 kD) lipoprotein PF03260 IPR004943
Lipoprotein_14 Actinobacillus constitutively-expressed outer membrane lipoprotein A PF03346
Lipoprotein_15 Secreted repeat of unknown function PF03640 IPR005297
Lipoprotein_16 Uncharacterized lipoprotein PF03923 IPR005619
Lipoprotein_17 Lipoprotein associated domain PF04200 IPR007326
Lipoprotein_18 NlpB/DapX lipoprotein PF06804 IPR010653
Lipoprotein_2 Borrelia lipoprotein PF00921 IPR000680
Lipoprotein_3 Lipoprotein PF00938 IPR001595
Lipoprotein_5 Transferrin binding protein-like solute binding protein PF01298 IPR001677
Lipoprotein_6 Lipoprotein PF01441 IPR001800
Lipoprotein_7 Adhesin lipoprotein PF01540 IPR002520
Lipoprotein_8 Hypothetical lipoprotein (MG045 family) PF02030
Lipoprotein_9 NLPA lipoprotein PF03180 IPR004872
Lipoprotein_X Mycoplasma MG185/MG260 protein PF03305 IPR004984
Lipoprot_C Lipoprotein GNA1870 C terminal like PF08794 IPR014902
Lipoxygenase Lipoxygenase PF00305 IPR013819
Lip_A_acyltrans Bacterial lipid A biosynthesis acyltransferase PF03279 IPR004960
Lip_prot_lig_C Bacterial lipoate protein ligase C-terminus PF10437 IPR019491
Lir1 Light regulated protein Lir1 PF07207 IPR009856
LisH LisH PF08513 IPR013720
LktC Actinobacillus actinomycetemcomitans leukotoxin activator LktC PF06261 IPR009369
LLGL LLGL2 PF08366 IPR013577
LMBR1 LMBR1-like membrane protein PF04791 IPR006876
LMP LMP repeated region PF04778 IPR006864
LMWPc Low molecular weight phosphotyrosine protein phosphatase PF01451 IPR017867
LNS2 LNS2 (Lipin/Ned1/Smp2) PF08235 IPR013209
LOH1CR12 Tumour suppressor protein PF10158 IPR018780
LolA Outer membrane lipoprotein carrier protein LolA PF03548 IPR004564
LolB Outer membrane lipoprotein LolB PF03550 IPR004565
LON ATP-dependent protease La (LON) domain PF02190 IPR003111
Lon_C Lon protease (S16) C-terminal proteolytic domain PF05362 IPR008269
LPP Repeated sequence found in lipoprotein LPP PF04728 IPR006817
Lpp-LpqN Probable lipoprotein LpqN PF10738 IPR019674
LPP20 LPP20 lipoprotein precursor PF02169 IPR002217
LppC LppC putative lipoprotein PF04348 IPR007443
LpxB Lipid-A-disaccharide synthetase PF02684 IPR003835
LpxC UDP-3-O-acyl N-acetylglycosamine deacetylase PF03331 IPR004463
LpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PF04613 IPR020573
LpxK Tetraacyldisaccharide-1-P 4'-kinase PF02606 IPR003758
LR8 LR8 protein PF06077
LrgA LrgA family PF03788 IPR005538
LrgB LrgB-like family PF04172 IPR007300
LRRCT Leucine rich repeat C-terminal domain PF01463 IPR000483
LRRNT Leucine rich repeat N-terminal domain PF01462 IPR000372
LRRNT_2 Leucine rich repeat N-terminal domain PF08263 IPR013210
LRR_1 Leucine Rich Repeat PF00560 IPR001611
LRR_2 Leucine Rich Repeat PF07723 IPR013101
LRR_3 Leucine Rich Repeat PF07725
LRR_adjacent LRR adjacent PF08191 IPR012569
LRS4 Monopolin complex subunit LRS4 PF10422 IPR018479
LRV Leucine rich repeat variant PF01816 IPR004830
LRV_FeS LRV protein FeS4 cluster PF05484 IPR008665
LSM LSM domain PF01423 IPR001163
LsmAD LsmAD domain PF06741 IPR009604
Lsm_interact Lsm interaction motif PF05391 IPR008669
LSPR Coagulation Factor V LSPD Repeat PF06049 IPR009271
LSR Lipolysis stimulated receptor (LSR) PF05624 IPR008664
LST Lipooligosaccharide sialyltransferase (LST) PF05855
LST1 LST-1 protein PF05083 IPR007775
LT-IIB Type II heat-labile enterotoxin , B subunit (LT-IIB) PF06453 IPR010503
LtrA Bacterial low temperature requirement A protein (LtrA) PF06772 IPR010640
LTV Low temperature viability protein PF04180 IPR007307
LTXXQ LTXXQ motif PF07813 IPR012899
LUC7 LUC7 N_terminus PF03194 IPR004882
Luciferase_3H Luciferase helical bundle domain PF10284 IPR018475
Luciferase_cat Luciferase catalytic domain PF10285 IPR018804
Luciferase_N Luciferase/LBP N-terminal domain PF05295 IPR007959
Lum_binding Lumazine binding domain PF00677 IPR001783
Lung_7-TM_R Lung seven transmembrane receptor PF06814 IPR009637
Luteo_coat Luteovirus coat protein PF00894 IPR001517
Luteo_P1-P2 Luteovirus RNA polymerase P1-P2/replicase PF08467 IPR013674
Luteo_PO Luteovirus P0 protein PF04662 IPR006755
Luteo_Vpg Luteovirus putative VPg genome linked protein PF01659 IPR001964
LuxC Acyl-CoA reductase (LuxC) PF05893 IPR008670
LuxE Acyl-protein synthetase, LuxE PF04443 IPR007534
LuxQ-periplasm LuxQ, periplasmic PF09308 IPR015387
LuxS S-Ribosylhomocysteinase (LuxS) PF02664 IPR003815
LVIVD LVIVD repeat PF08309 IPR013211
Ly-6_related Caenorhabditis elegans ly-6-related protein PF06579 IPR010558
Ly49 Ly49-like protein, N-terminal region PF08391 IPR013600
Lyase_1 Lyase PF00206 IPR022761
Lyase_8 Polysaccharide lyase family 8, super-sandwich domain PF02278 IPR003159
Lyase_8_C Polysaccharide lyase family 8, C-terminal beta-sandwich domain PF02884 IPR004103
Lyase_8_N Polysaccharide lyase family 8, N terminal alpha-helical domain PF08124 IPR012970
Lyase_catalyt Lyase, catalytic PF09093 IPR015177
Lyase_N Lyase, N terminal PF09092 IPR015176
Lycopene_cycl Lycopene cyclase protein PF05834 IPR008671
Lys C-type lysozyme/alpha-lactalbumin family PF00062 IPR001916
Lys-AminoMut_A D-Lysine 5,6-aminomutase alpha subunit PF09043 IPR015130
LysE LysE type translocator PF01810 IPR001123
Lysine_decarbox Possible lysine decarboxylase PF03641 IPR005269
Lysis_col Lysis protein PF02402 IPR003059
Lysis_S Lysis protein S PF04971 IPR007054
LysM LysM domain PF01476 IPR018392
LysR_substrate LysR substrate binding domain PF03466 IPR005119
Lysyl_oxidase Lysyl oxidase PF01186 IPR001695
LYTB LytB protein PF02401 IPR003451
LytR_cpsA_psr Cell envelope-related transcriptional attenuator domain PF03816 IPR004474
LytTR LytTr DNA-binding domain PF04397 IPR007492
L_biotic_typeA Type-A lantibiotic PF04604 IPR007682
L_HGMIC_fpl Lipoma HMGIC fusion partner-like protein PF10242 IPR019372
L_lactis_ph-MCP Lactococcus lactis bacteriophage major capsid protein PF06673 IPR009559
L_lactis_RepB_C Lactococcus lactis RepB C-terminus PF06430 IPR010931
L_lac_phage_MSP Lactococcus lactis bacteriophage major structural protein PF06488 IPR010517
M M protein repeat PF02370 IPR003345
M-factor M-factor PF03855 IPR005555
M-inducer_phosp M-phase inducer phosphatase PF06617 IPR000751
M16C_assoc Peptidase M16C associated PF08367 IPR013578
M20_dimer Peptidase dimerisation domain PF07687 IPR011650
M3 M3 PF09213 IPR015296
MA-Mit Mycoplasma arthritidis-derived mitogen PF09245 IPR015326
MA3 MA3 domain PF02847 IPR003891
MAAL_C Methylaspartate ammonia-lyase C-terminus PF07476
MAAL_N Methylaspartate ammonia-lyase N-terminus PF05034 IPR022665
Mab-21 Mab-21 protein PF03281 IPR020950
Mac-1 Mac 1 PF09028 IPR015117
Macoilin Transmembrane protein PF09726 IPR019130
MACPF MAC/Perforin domain PF01823 IPR020864
Macro Macro domain PF01661 IPR002589
Macscav_rec Macrophage scavenger receptor PF03523 IPR003543
MAD Mitotic checkpoint protein PF05557 IPR008672
Mad3_BUB1_I Mad3/BUB1 homology region 1 PF08311 IPR013212
Mad3_BUB1_II Mad3/BUB1 homology region 2 PF08171 IPR012572
MADF_DNA_bdg Alcohol dehydrogenase transcription factor Myb/SANT-like PF10545 IPR006578
MadL Malonate transporter MadL subunit PF03817 IPR004690
MadM Malonate/sodium symporter MadM subunit PF03818 IPR018402
Maf Maf-like protein PF02545 IPR003697
Maf1 Maf1 regulator PF09174 IPR015257
Maf_N Maf N-terminal region PF08383 IPR013592
MAGE MAGE family PF01454 IPR002190
Mago-bind Mago binding PF09282 IPR015362
Mago_nashi Mago nashi protein PF02792 IPR004023
MAGP Microfibril-associated glycoprotein (MAGP) PF05507 IPR008673
MAGSP Male accessory gland secretory protein PF03082 IPR004315
MAGUK_N_PEST Polyubiquitination (PEST) N-terminal domain of MAGUK PF10608 IPR019590
Mak10 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase PF04112 IPR007244
Mak16 Mak16 protein PF04874 IPR006958
Malate_synthase Malate synthase PF01274 IPR001465
malic Malic enzyme, N-terminal domain PF00390 IPR012301
Malic_M Malic enzyme, NAD binding domain PF03949 IPR012302
MalM Maltose operon periplasmic protein precursor (MalM) PF07148 IPR010794
MAM MAM domain PF00629 IPR000998
MAM1 Monopolin complex protein MAM1 PF10434 IPR018847
MAM33 Mitochondrial glycoprotein PF02330 IPR003428
MamL-1 MamL-1 domain PF09596 IPR019082
Man-6-P_recep Cation-dependent mannose-6-phosphate receptor PF02157
MAN1_C MAN1 C terminal PF09402 IPR018996
MANEC MANEC domain PF07502 IPR011106
Mannitol_dh Mannitol dehydrogenase Rossmann domain PF01232 IPR013131
Mannitol_dh_C Mannitol dehydrogenase C-terminal domain PF08125 IPR013118
MannoseP_isomer Mannose-6-phosphate isomerase PF01050 IPR001538
Mannosyl_trans Mannosyltransferase (PIG-M) PF05007 IPR007704
Mannosyl_trans2 Mannosyltransferase (PIG-V)) PF04188
MaoC_dehydratas MaoC like domain PF01575 IPR002539
MAP MAP domain PF03642 IPR005298
MAP1B_neuraxin Neuraxin and MAP1B repeat PF00414 IPR000102
MAP1_LC3 Microtubule associated protein 1A/1B, light chain 3 PF02991 IPR004241
MAP2_projctn MAP2/Tau projection domain PF08377 IPR013588
MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family) PF03999 IPR007145
MAP7 MAP7 (E-MAP-115) family PF05672 IPR008604
MAPEG MAPEG family PF01124 IPR001129
MAPKK1_Int Mitogen-activated protein kinase kinase 1 interacting PF08923 IPR015019
MarC MarC family integral membrane protein PF01914 IPR002771
MARCKS MARCKS family PF02063 IPR002101
Marek_A Marek's disease glycoprotein A PF02124 IPR001038
Marek_SORF3 Marek's disease-like virus SORF3 protein PF07153 IPR009823
MarR MarR family PF01047 IPR000835
MARVEL Membrane-associating domain PF01284 IPR021128
MAR_sialic_bdg Sialic-acid binding micronemal adhesive repeat PF10564 IPR019562
MAS20 MAS20 protein import receptor PF02064 IPR002056
MASE1 MASE1 PF05231 IPR007895
MASE2 MASE2 domain PF05230 IPR007894
Mastoparan Mastoparan protein PF08249 IPR013213
Mastoparan_2 Mastoparan peptide PF08251 IPR013214
MAT1 CDK-activating kinase assembly factor MAT1 PF06391 IPR015877
MatC_N Dicarboxylate carrier protein MatC N-terminus PF07158 IPR009827
MatE MatE PF01554 IPR002528
MATH MATH domain PF00917 IPR002083
MatK_N MatK/TrnK amino terminal region PF01824 IPR002866
Matrilin_ccoil Trimeric coiled-coil oligomerisation domain of matrilin PF10393 IPR019466
Matrix Viral matrix protein PF00661 IPR000982
MAT_Alpha1 Mating-type protein MAT alpha 1 PF04769 IPR006856
MauE Methylamine utilisation protein MauE PF07291 IPR009908
MazG MazG nucleotide pyrophosphohydrolase domain PF03819 IPR004518
MBA1 MBA1-like protein PF07961
MBD Methyl-CpG binding domain PF01429 IPR001739
MbeB_N MbeB-like, N-term conserved region PF04837 IPR006922
MbeD_MobD MbeD/MobD like PF04899 IPR006983
MBF1 Multiprotein bridging factor 1 PF08523 IPR013729
MBOAT MBOAT family PF03062 IPR004299
MBT mbt repeat PF02820 IPR004092
MbtH MbtH-like protein PF03621 IPR005153
MC1 Non-histone chromosomal protein MC1 PF05854 IPR008674
MCC-bdg_PDZ PDZ domain of MCC-2 bdg protein for Usher syndrome PF10506 IPR019536
MCD Malonyl-CoA decarboxylase (MCD) PF05292 IPR007956
MCE mce related protein PF02470 IPR003399
MCH Cyclohydrolase (MCH) PF02289 IPR003209
MCLC Mid-1-related chloride channel (MCLC) PF05934 IPR009231
MCM MCM2/3/5 family PF00493 IPR001208
Mcm10 Mcm10 replication factor PF09332 IPR015411
MCPsignal Methyl-accepting chemotaxis protein (MCP) signaling domain PF00015 IPR004089
MCPVI Minor capsid protein VI PF02993 IPR004243
MCP_N Vibrio chemotaxis protein N terminus PF05581 IPR008762
McrBC McrBC 5-methylcytosine restriction system component PF10117 IPR019292
MCR_alpha Methyl-coenzyme M reductase alpha subunit, C-terminal domain PF02249 IPR009047
MCR_alpha_N Methyl-coenzyme M reductase alpha subunit, N-terminal domain PF02745 IPR003183
MCR_beta Methyl-coenzyme M reductase beta subunit, C-terminal domain PF02241 IPR022679
MCR_beta_N Methyl-coenzyme M reductase beta subunit, N-terminal domain PF02783 IPR022680
MCR_C Methyl-coenzyme M reductase operon protein C PF04609 IPR007687
MCR_D Methyl-coenzyme M reductase operon protein D PF02505 IPR003901
MCR_gamma Methyl-coenzyme M reductase gamma subunit PF02240 IPR003178
MdcD Malonate decarboxylase delta subunit (MdcD) PF06857 IPR009662
MdcE Malonate decarboxylase gamma subunit (MdcE) PF06833 IPR009648
MdcG Phosphoribosyl-dephospho-CoA transferase MdcG PF10620 IPR017557
MDH Methanol dehydrogenase beta subunit PF02315 IPR003420
MDM31_MDM32 Yeast mitochondrial distribution and morphology (MDM) proteins PF08118 IPR012571
MdoG Periplasmic glucan biosynthesis protein, MdoG PF04349 IPR007444
Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH) PF06433 IPR009451
Me-amine-dh_L Methylamine dehydrogenase, L chain PF02975 IPR013504
MEA1 Male enhanced antigen 1 (MEA1) PF06910 IPR009685
MecA Negative regulator of genetic competence (MecA) PF05389 IPR008681
MecA_N NTF2-like N-terminal transpeptidase domain PF05223 IPR007887
Meckelin Meckelin (Transmembrane protein 67) PF09773 IPR019170
Med1-Trap220 Mediator of RNA polymerase II transcription subunit 1 PF10744 IPR019680
Med10 Transcription factor subunit Med10 PF09748 IPR019145
Med11 Mediator complex protein PF10280 IPR019404
Med12 Transcription mediator subunit Med12 PF09497 IPR019035
MED14 Mediator complex subunit MED14 PF08638 IPR013947
Med18 Med18 protein PF09637 IPR019095
Med19 Mediator of RNA pol II transcription subunit 19 PF10278 IPR019403
Med5 Mediator complex subunit Med5 PF08689 IPR014801
MED6 MED6 mediator sub complex component PF04934 IPR007018
MED7 MED7 protein PF05983 IPR009244
MEF2_binding MEF2 binding PF09047 IPR015134
Mei5 Double-strand recombination repair protein PF10376 IPR018468
Meiotic_rec114 Meiotic recombination protein rec114 PF03525 IPR004354
MEKHLA MEKHLA domain PF08670 IPR013978
MelC1 Tyrosinase co-factor MelC1 PF06236 IPR010928
Meleagrin Meleagrin/Cygnin family PF08189 IPR012573
Melibiase Melibiase PF02065 IPR000111
Melittin Melittin PF01372 IPR002116
Membralin Tumour-associated protein PF09746 IPR019144
Membr_traf_MHD Munc13 (mammalian uncoordinated) homology domain PF10540 IPR019558
Memo Memo-like protein PF01875 IPR002737
MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain PF02964 IPR004222
Mem_trans Membrane transport protein PF03547 IPR004776
Menin Menin PF05053 IPR007747
MENTAL Cholesterol-capturing domain PF10457 IPR019498
MepB MepB protein PF08877 IPR011235
Mer2 Mer2 PF09074 IPR015159
MerB Alkylmercury lyase PF03243 IPR004927
MerC MerC mercury resistance protein PF03203
MerE MerE protein PF05052 IPR007746
Merozoite_SPAM Merozoite surface protein (SPAM) PF07133 IPR010784
MerR MerR family regulatory protein PF00376 IPR000551
MerR-DNA-bind MerR, DNA binding PF09278 IPR015358
MerT MerT mercuric transport protein PF02411 IPR003457
Mesd Chaperone for wingless signalling and trafficking of LDL receptor PF10185 IPR019330
Mesothelin Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin) PF06060 IPR010335
META META domain PF03724 IPR005184
Metalloenzyme Metalloenzyme superfamily PF01676 IPR006124
Metallophos Calcineurin-like phosphoesterase PF00149 IPR004843
Metallophos_C Calcineurin-like phosphoesterase C-terminal PF08413 IPR013622
Metallothio Metallothionein PF00131 IPR003019
Metallothionein Metallothionein PF05522 IPR017980
Metallothio_11 Metallothionein family 11 PF02066 IPR000869
Metallothio_2 Metallothionein PF01439 IPR000347
Metallothio_5 Metallothionein family 5 PF02067 IPR000966
Metallothio_7 Metallothionein family 7 PF07846 IPR012484
Metallothio_PEC Plant PEC family metallothionein PF02068 IPR000316
Metallothio_Pro Prokaryotic metallothionein PF02069 IPR000518
Metal_hydrol Predicted metal-dependent hydrolase PF10118 IPR016516
Metaviral_G Metaviral_G glycoprotein PF09595 IPR018585
Methuselah_N Methuselah N-terminus PF06652 IPR010596
Methylase_S Type I restriction modification DNA specificity domain PF01420 IPR000055
MethylPyrKinase Archaeal phosphomethylpyrimidine kinase PF10120 IPR019293
MethyltransfD12 D12 class N6 adenine-specific DNA methyltransferase PF02086 IPR012327
Methyltransf_10 Protein of unknown function (DUF890) PF05971 IPR010286
Methyltransf_11 Methyltransferase domain PF08241 IPR013216
Methyltransf_12 Methyltransferase domain PF08242 IPR013217
Methyltransf_13 Hypothetical methyltransferase PF08421 IPR013630
Methyltransf_14 C-methyltransferase PF08484 IPR013691
Methyltransf_15 RNA cap guanine-N2 methyltransferase PF09445 IPR019012
Methyltransf_16 Putative methyltransferase PF10294 IPR019410
Methyltransf_1N 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PF02870 IPR008332
Methyltransf_2 O-methyltransferase PF00891 IPR001077
Methyltransf_3 O-methyltransferase PF01596 IPR002935
Methyltransf_4 Putative methyltransferase PF02390 IPR003358
Methyltransf_5 MraW methylase family PF01795 IPR002903
Methyltransf_6 Demethylmenaquinone methyltransferase PF03737 IPR005493
Methyltransf_7 SAM dependent carboxyl methyltransferase PF03492 IPR005299
Methyltransf_8 Hypothetical methyltransferase PF05148 IPR007823
Methyltransf_9 Protein of unknown function (DUF1698) PF08003 IPR010017
Methyltrans_RNA RNA methyltransferase PF04452 IPR006700
Methyltrans_SAM S-adenosylmethionine-dependent methyltransferase PF10672 IPR019614
Methyltrans_Typ Typoviral methyltransferase PF10641
MethyTransf_Reg Predicted methyltransferase regulatory domain PF10119 IPR018773
Meth_synt_1 Cobalamin-independent synthase, N-terminal domain PF08267 IPR013215
Meth_synt_2 Cobalamin-independent synthase, Catalytic domain PF01717 IPR002629
MetJ Met Apo-repressor, MetJ PF01340 IPR002084
MetRS-N MetRS-N binding domain PF09635 IPR018285
MetW Methionine biosynthesis protein MetW PF07021 IPR010743
Met_10 Met-10+ like-protein PF02475 IPR003402
Met_asp_mut_E Methylaspartate mutase E chain (MutE) PF06368 IPR006396
Met_synt_B12 Vitamin B12 dependent methionine synthase, activation domain PF02965 IPR004223
MFAP1_C Micro-fibrillar-associated protein 1 C-terminus PF06991 IPR009730
MFMR G-box binding protein MFMR PF07777 IPR012900
Mfp-3 Foot protein 3 PF04202 IPR007328
MFS_1 Major Facilitator Superfamily PF07690 IPR011701
MFS_Mycoplasma Mycoplasma MFS transporter PF07672 IPR011699
MF_alpha Yeast mating factor alpha hormone PF04648 IPR006742
MF_alpha_N Mating factor alpha precursor N-terminus PF05436 IPR008675
Mg-por_mtran_C Magnesium-protoporphyrin IX methyltransferase C-terminus PF07109 IPR010940
Mg296 Mg296 protein PF09644 IPR019097
Mga Mga helix-turn-helix domain PF05043 IPR007737
MGAT2 N-acetylglucosaminyltransferase II (MGAT2) PF05060 IPR007754
MGC-24 Multi-glycosylated core protein 24 (MGC-24) PF05283 IPR007947
MGDG_synth Monogalactosyldiacylglycerol (MGDG) synthase PF06925 IPR009695
Mgm101p Mitochondrial genome maintenance MGM101 PF06420 IPR009446
MgpC MgpC protein precursor PF05220 IPR007885
Mgr1 Mgr1-like, i-AAA protease complex subunit PF08602 IPR013911
MGS MGS-like domain PF02142 IPR011607
MgtC MgtC family PF02308 IPR003416
MgtE Divalent cation transporter PF01769 IPR006667
MgtE_N MgtE intracellular N domain PF03448 IPR006668
Mg_chelatase Magnesium chelatase, subunit ChlI PF01078 IPR000523
MH1 MH1 domain PF03165 IPR003619
MH2 MH2 domain PF03166 IPR001132
MHC2-interact CLIP, MHC2 interacting PF09307 IPR015386
MHCassoc_trimer Class II MHC-associated invariant chain trimerisation domain PF08831 IPR011988
MHC_I Class I Histocompatibility antigen, domains alpha 1 and 2 PF00129 IPR001039
MHC_II_alpha Class II histocompatibility antigen, alpha domain PF00993 IPR001003
MHC_II_beta Class II histocompatibility antigen, beta domain PF00969 IPR000353
MHC_I_C MHC_I C-terminus PF06623 IPR010579
MHYT Bacterial signalling protein N terminal repeat PF03707 IPR005330
MiaE tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PF06175 IPR010386
MiAMP1 MiAMP1 PF09117 IPR015201
MIase Muconolactone delta-isomerase PF02426 IPR003464
MIB_HERC2 Mib_herc2 PF06701 IPR010606
Mic1 Colon cancer-associated protein Mic1-like PF07035 IPR009755
Microcin Colicin E1 (microcin) immunity protein PF03526 IPR003061
Microtub_assoc Microtubule associated PF07989 IPR012943
Microvirus_A Microvirus A protein PF05442 IPR008684
Microvir_H Microvirus H protein (pilot protein) PF04687 IPR006777
Microvir_J Microvirus J protein PF04726 IPR006815
Microvir_lysis Microvirus lysis protein (E), C terminus PF04517 IPR007605
Micro_A_star Microvirus A* protein PF05441 IPR008683
Mid2 Mid2 like cell wall stress sensor PF04478 IPR007567
MIF Macrophage migration inhibitory factor (MIF) PF01187 IPR001398
MIF4G MIF4G domain PF02854 IPR003890
MIF4G_like MIF4G like PF09088 IPR015172
MIF4G_like_2 MIF4G like PF09090 IPR015174
Mig-14 Mig-14 PF07395 IPR009977
MinC_C Septum formation inhibitor MinC, C-terminal domain PF03775 IPR005526
MinC_N Septum formation inhibitor MinC, N-terminal domain PF05209 IPR007874
MinE Septum formation topological specificity factor MinE PF03776 IPR005527
Minor_tail_Z Prophage minor tail protein Z (GPZ) PF06763 IPR010633
MIP Major intrinsic protein PF00230 IPR000425
MIP-T3 Microtubule-binding protein MIP-T3 PF10243 IPR018799
MipA MltA-interacting protein MipA PF06629 IPR010583
MipZ ATPase MipZ PF09140 IPR015223
MIR MIR domain PF02815 IPR003608
Miro Miro-like protein PF08477 IPR013684
Mis12 Mis12 protein PF05859 IPR008685
Mis12_component Mis12-Mtw1 protein family PF08202 IPR013218
Mis14 Kinetochore protein Mis14 like PF08641 IPR013950
Mis6 Mis6 PF07778 IPR012485
Misat_Myo_SegII Misato Segment II myosin-like domain PF10644 IPR019605
MIT MIT (microtubule interacting and transport) domain PF04212 IPR007330
Mitoc_L55 Mitochondrial ribosomal protein L55 PF09776 IPR018615
Mitofilin Mitochondrial inner membrane protein PF09731 IPR019133
MitoNEET_N Iron-containing outer mitochondrial membrane protein N-terminus PF10660 IPR019610
Mitovir_RNA_pol Mitovirus RNA-dependent RNA polymerase PF05919 IPR008686
Mito_carr Mitochondrial carrier protein PF00153 IPR018108
Mit_gmP Putative mitochondrial genome maintenance protein PF10247 IPR018450
Mit_proteolip Mitochondrial proteolipid PF08039 IPR012574
Mlf1IP Myelodysplasia-myeloid leukemia factor 1-interacting protein PF10248 IPR019376
Mlo Mlo family PF03094 IPR004326
Mlp Mlp lipoprotein family PF03304 IPR004983
MlrC_C MlrC C-terminus PF07171 IPR010799
MltA MltA specific insert domain PF03562 IPR005300
MLTD_N MLTD_N PF06474 IPR010511
MmgE_PrpD MmgE/PrpD family PF03972 IPR005656
MmlI Methylmuconolactone methyl-isomerase PF09448 IPR018566
MmoB_DmpM MmoB/DmpM family PF02406 IPR003454
Mmp37 Mitochondrial matrix Mmp37 PF09139 IPR015222
MMPL MMPL family PF03176 IPR004869
MMR_HSR1 GTPase of unknown function PF01926 IPR002917
MMR_HSR1_C GTPase of unknown function C-terminal PF08438 IPR013646
MMS1 Mono-functional DNA-alkylating agent methyl methanesulfonate PF10433 IPR018846
MMtag Kinase phosphorylation protein PF10159 IPR019315
MMTV_SAg Mouse mammary tumour virus superantigen PF01054 IPR001213
MM_CoA_mutase Methylmalonyl-CoA mutase PF01642 IPR006099
Mnd1 Mnd1 family PF03962 IPR005647
MnhB Domain related to MnhB subunit of Na+/H+ antiporter PF04039 IPR007182
MNHE Na+/H+ ion antiporter subunit PF01899 IPR002758
MNNL N terminus of Notch ligand PF07657 IPR011651
MNSV_P7B Melon necrotic spot virus P7B protein PF06692 IPR009575
Mn_catalase Manganese containing catalase PF05067 IPR007760
Mo-co_dimer Mo-co oxidoreductase dimerisation domain PF03404 IPR005066
Mo-nitro_C Mo-dependent nitrogenase C-terminus PF06967 IPR009717
Mo25 Mo25-like PF08569 IPR013878
MoaC MoaC family PF01967 IPR002820
MoaE MoaE protein PF02391 IPR003448
MoaF Molybdenum cofactor biosynthesis protein F PF10703 IPR019643
Mob1_phocein Mob1/phocein family PF03637 IPR005301
MobA_MobL MobA/MobL family PF03389 IPR005053
MobB Molybdopterin guanine dinucleotide synthesis protein B PF03205
MobC Bacterial mobilisation protein (MobC) PF05713 IPR008687
MOBP Myelin-associated oligodendrocytic basic protein (MOBP) PF04698 IPR006788
Mob_Pre Plasmid recombination enzyme PF01076 IPR001668
Mob_synth_C Molybdenum Cofactor Synthesis C PF06463 IPR010505
MoCF_biosynth Probable molybdopterin binding domain PF00994 IPR001453
Mod_r Modifier of rudimentary (Mod(r)) protein PF07200 IPR009851
MoeA_C MoeA C-terminal region (domain IV) PF03454 IPR005111
MoeA_N MoeA N-terminal region (domain I and II) PF03453 IPR005110
MoeZ_MoeB MoeZ/MoeB domain PF05237 IPR007901
MOFRL MOFRL family PF05161 IPR007835
Mog1 Ran-interacting Mog1 protein PF04603 IPR007681
Molybdopterin Molybdopterin oxidoreductase PF00384 IPR006656
Molybdop_Fe4S4 Molybdopterin oxidoreductase Fe4S4 domain PF04879 IPR006963
Molydop_binding Molydopterin dinucleotide binding domain PF01568 IPR006657
Mon1 Trafficking protein Mon1 PF03164 IPR004353
Monellin Monellin PF09200 IPR015283
Monooxygenase_B Monooxygenase subunit B protein PF04744 IPR006833
Mor Mor transcription activator family PF08765 IPR014875
Morbilli_P Morbillivirus RNA polymerase alpha subunit PF01647
Moricin Moricin PF06451 IPR009456
MORN MORN repeat PF02493 IPR003409
MORN_2 MORN repeat variant PF07661 IPR011652
Morph_protein1 Defects in morphology protein 1, mitochondrial precursor PF09810 IPR019190
MOSC MOSC domain PF03473 IPR005302
MOSC_N MOSC N-terminal beta barrel domain PF03476 IPR005303
MOSP_C Major Outer Sheath Protein C-terminal region PF02722 IPR003872
MOSP_N Major Outer Sheath Protein N-terminal region PF02707 IPR003857
MotA_activ Transcription factor MotA, activation domain PF09114 IPR015198
MotA_ExbB MotA/TolQ/ExbB proton channel family PF01618 IPR002898
MotCF Bacteriophage T4 MotA, C-terminal PF09158 IPR015241
Motile_Sperm MSP (Major sperm protein) domain PF00635 IPR000535
Motilin_assoc Motilin/ghrelin-associated peptide PF04643 IPR006737
Motilin_ghrelin Motilin/ghrelin PF04644 IPR006738
Mov34 Mov34/MPN/PAD-1 family PF01398 IPR000555
MOZ_SAS MOZ/SAS family PF01853 IPR002717
MP Viral movement protein (MP) PF01107 IPR001022
Mpp10 Mpp10 protein PF04006 IPR007151
MPP6 M-phase phosphoprotein 6 PF10175
MpPF1 M penetrans paralogue family 1 PF07668 IPR011653
MpPF2 M penetrans paralogue family 2 PF07665
MpPF26 M penetrans paralogue family 26 PF07666 IPR011655
MPPN MPPN (rrm-like) domain PF05172 IPR007846
Mpt_N Methylene-tetrahydromethanopterin dehydrogenase, N-terminal PF09176 IPR015259
Mpv17_PMP22 Mpv17 / PMP22 family PF04117 IPR007248
Mqo Malate:quinone oxidoreductase (Mqo) PF06039 IPR006231
MraY_sig1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PF10555 IPR018480
MraZ MraZ protein PF02381 IPR020603
MRC1 MRC1-like domain PF09444 IPR018564
Mre11_DNA_bind Mre11 DNA-binding presumed domain PF04152 IPR007281
MreB_Mbl MreB/Mbl protein PF06723 IPR004753
MreC rod shape-determining protein MreC PF04085 IPR007221
MreD rod shape-determining protein MreD PF04093 IPR007227
MRG MRG PF05712 IPR008676
MRJP Major royal jelly protein PF03022 IPR003534
mRNA_cap_C mRNA capping enzyme, C-terminal domain PF03919 IPR013846
mRNA_cap_enzyme mRNA capping enzyme, catalytic domain PF01331 IPR001339
mRNA_triPase mRNA capping enzyme, beta chain PF02940 IPR004206
MRP Mitochondrial RNA binding protein MRP PF09387 IPR018539
MRP-L27 Mitochondrial ribosomal protein L27 PF09809 IPR019189
MRP-L28 Mitochondrial ribosomal protein L28 PF09812 IPR019192
MRP-L35 Mitochondrial 39S ribosomal protein L35 PF10196
MRP-L47 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) PF06984 IPR010729
MRP-L51 Mitochondrial ribosomal subunit PF10244 IPR019373
MRP-S22 Mitochondrial 28S ribosomal protein S22 PF10245 IPR019374
MRP-S23 Mitochondrial ribosomal protein S23 PF10484
MRP-S27 Mitochondrial 28S ribosomal protein S27 PF10037 IPR019266
MRP-S28 Mitochondrial ribosomal subunit protein PF10213 IPR019349
MRP-S32 Mitochondrial 28S ribosomal protein S32 PF10210 IPR019346
MRP-S33 Mitochondrial ribosomal subunit S27 PF08293 IPR013219
MRP-S35 Mitochondrial ribosomal protein MRP-S35 PF10246 IPR019375
MrpF_PhaF Multiple resistance and pH regulation protein F (MrpF / PhaF) PF04066 IPR007208
MRP_L53 39S ribosomal protein L53/MRP-L53 PF10780 IPR019716
Mrr_cat Restriction endonuclease PF04471 IPR007560
MRVI1 MRVI1 protein PF05781 IPR008677
MR_MLE Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PF01188 IPR013342
MR_MLE_N Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PF02746 IPR013341
MSA_2 Merozoite Surface Antigen 2 (MSA-2) family PF00985 IPR001136
MscL Large-conductance mechanosensitive channel, MscL PF01741 IPR001185
MSG Major surface glycoprotein PF02349 IPR003330
MSP Manganese-stabilising protein / photosystem II polypeptide PF01716 IPR002628
MSP1b Major surface protein 1B PF03429 IPR005091
MSP1_C Merozoite surface protein 1 (MSP1) C-terminus PF07462 IPR010901
MspA MspA PF09203 IPR015286
Mss4 Mss4 protein PF04421 IPR007515
MSSP Male specific sperm protein PF03940 IPR005634
MSV199 MSV199 domain PF10553 IPR018879
MS_channel Mechanosensitive ion channel PF00924 IPR006685
MT-A70 MT-A70 PF05063 IPR007757
Mtc Tricarboxylate carrier PF03820 IPR004686
MTD methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase PF01993 IPR002844
mTERF mTERF PF02536 IPR003690
MTH865 MTH865-like family PF07747 IPR009108
MTHFR Methylenetetrahydrofolate reductase PF02219 IPR003171
MtlR Mannitol repressor PF05068 IPR007761
MtmB Monomethylamine methyltransferase MtmB PF05369 IPR008031
MtN3_slv MtN3/saliva family PF03083 IPR018169
Mtp Golgi 4-transmembrane spanning transporter PF03821 IPR004687
MTP18 Mitochondrial 18 KDa protein (MTP18) PF10558 IPR019560
Mtr2 Nuclear pore RNA shuttling protein Mtr2 PF10429 IPR019488
MtrA Tetrahydromethanopterin S-methyltransferase, subunit A PF04208 IPR013340
MtrB Tetrahydromethanopterin S-methyltransferase subunit B PF05440 IPR008690
MtrC Tetrahydromethanopterin S-methyltransferase, subunit C PF04211 IPR005865
MtrC_related Uncharacterized protein related to methyl coenzyme M reductase subunit C PF10121
MtrD Tetrahydromethanopterin S-methyltransferase, subunit D PF04207 IPR005779
MtrE Tetrahydromethanopterin S-methyltransferase, subunit E PF04206 IPR005780
MtrF Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) PF09472 IPR013347
MtrG Tetrahydromethanopterin S-methyltransferase, subunit G PF04210 IPR005866
MtrH Tetrahydromethanopterin S-methyltransferase MtrH subunit PF02007 IPR002856
MTS Methyltransferase small domain PF05175 IPR007848
MTS_N Methyltransferase small domain N-terminal PF08468 IPR013675
MttA_Hcf106 mttA/Hcf106 family PF02416 IPR003369
MTTB Trimethylamine methyltransferase (MTTB) PF06253 IPR010426
Mt_ATP-synt_B Mitochondrial ATP synthase B chain precursor (ATP-synt_B) PF05405 IPR008688
Mt_ATP-synt_D ATP synthase D chain, mitochondrial (ATP5H) PF05873
Mu-conotoxin Mu-Conotoxin PF05374 IPR008036
Mu-like_Com Mu-like prophage protein Com PF10122 IPR019294
Mu-like_GpL Bacteriophage Mu tail sheath protein (GpL) PF06274
Mu-like_gpT Mu-like prophage major head subunit gpT PF10124 IPR018774
Mu-like_Pro Mu-like prophage I protein PF10123 IPR019295
Mu-transpos_C Mu transposase, C-terminal PF09299 IPR015378
MucBP MucBP domain PF06458
MucB_RseB MucB/RseB family PF03888 IPR005588
Mucin Mucin-like glycoprotein PF01456 IPR000458
MuDR MuDR family transposase PF03108 IPR004332
MukB MukB N-terminal PF04310 IPR007406
MukE MukE-like family PF04288 IPR007385
MULE MULE transposase domain PF10551 IPR018289
Multi_Drug_Res Small Multidrug Resistance protein PF00893 IPR000390
MurB_C UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PF02873 IPR011601
Mur_ligase Mur ligase family, catalytic domain PF01225 IPR000713
Mur_ligase_C Mur ligase family, glutamate ligase domain PF02875 IPR004101
Mur_ligase_M Mur ligase middle domain PF08245 IPR013221
Mus7 Mus7/MMS22 family PF09462 IPR019021
Muskelin_N Muskelin N-terminus PF06588 IPR010565
MutH DNA mismatch repair enzyme MutH PF02976 IPR018140
MutL_C MutL C terminal dimerisation domain PF08676 IPR014790
MutS_I MutS domain I PF01624 IPR007695
MutS_II MutS domain II PF05188 IPR007860
MutS_III MutS domain III PF05192 IPR007696
MutS_IV MutS family domain IV PF05190 IPR007861
MutS_V MutS domain V PF00488 IPR000432
Mu_DNA_bind Mu DNA-binding domain PF02316 IPR003314
Mu_I-gamma Mu DNA binding, I gamma subdomain PF09039 IPR015126
Mu_transposase Bacteriophage Mu transposase PF02914 IPR004189
Mvb12 ESCRT-I subunit Mvb12 PF09452 IPR019014
MVIN MviN-like protein PF03023 IPR004268
MxiH Type III secretion needle MxiH like PF09392 IPR021123
Myb_DNA-binding Myb-like DNA-binding domain PF00249 IPR014778
Myb_DNA-bind_2 Rap1 Myb domain PF08914 IPR015010
Myc-LZ Myc leucine zipper domain PF02344 IPR003327
Mycobact_memb Mycobacterium membrane protein PF05423 IPR008693
Mycoplasma_MAA2 Mycoplasma arthritidis MAA2 repeat PF05807 IPR008694
Mycoplasma_p37 High affinity transport system protein p37 PF06646 IPR010592
Myco_19_kDa Mycobacterium 19 kDa lipoprotein antigen PF05481 IPR008691
Myco_arth_vir_N Mycoplasma virulence signal region (Myco_arth_vir_N) PF09610 IPR011732
Myco_haema Mycoplasma haemagglutinin PF05692 IPR008692
Myc_N Myc amino-terminal region PF01056 IPR012682
Myelin-PO_N Myelin-PO extracellular N-terminal region PF10570 IPR019566
Myelin_MBP Myelin basic protein PF01669 IPR000548
Myelin_PLP Myelin proteolipid protein (PLP or lipophilin) PF01275 IPR001614
Myosin_HC-like Myosin II heavy chain-like PF07058 IPR009768
Myosin_head Myosin head (motor domain) PF00063 IPR001609
Myosin_N Myosin N-terminal SH3-like domain PF02736 IPR004009
Myosin_tail_1 Myosin tail PF01576 IPR002928
Myosin_TH1 Myosin tail PF06017 IPR010926
Myotoxins Myotoxin PF00819 IPR000881
Myotub-related Myotubularin-related PF06602 IPR010569
MYT1 Myelin transcription factor 1 PF08474 IPR013681
MyTH4 MyTH4 domain PF00784 IPR000857
Myticin-prepro Myticin pre-proprotein from the mussel PF10690 IPR019631
N1221 N1221-like protein PF07923 IPR012486
N2227 N2227-like protein PF07942 IPR012901
N6_Mtase N-6 DNA Methylase PF02384 IPR003356
N6_N4_Mtase DNA methylase PF01555 IPR002941
NA37 37-kD nucleoid-associated bacterial protein PF04245 IPR007358
Nab1 Conserved region in Nab1 PF04902 IPR006986
Nab6_mRNP_bdg RNA-recognition motif PF10567 IPR018885
NABP Nucleic acid binding protein NABP PF07990 IPR012940
NAC NAC domain PF01849 IPR002715
NAcGluc_Transf Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 PF10149 IPR019306
NACHT NACHT domain PF05729
NAD-GH NAD-specific glutamate dehydrogenase PF10712 IPR019651
NAD4L NADH dehydrogenase subunit 4L (NAD4L) PF06235 IPR009356
NadA Quinolinate synthetase A protein PF02445 IPR003473
NADase_NGA Nicotine adenine dinucleotide glycohydrolase (NADase) PF07461 IPR010900
NADH-G_4Fe-4S_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PF10588 IPR019574
NADH-u_ox-rdase NADH-ubiquinone oxidoreductase 21 kDa subunit PF10785
NADH5_C NADH dehydrogenase subunit 5 C-terminus PF06455 IPR010934
NADHdeh_related NADH dehydrogenase I, subunit N related protein PF10125 IPR017059
NADHdh NADH dehydrogenase PF00146 IPR001694
NADH_4Fe-4S NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PF10589 IPR019575
NADH_dehy_S2_C NADH dehydrogenase subunit 2 C-terminus PF06444 IPR010933
NADH_oxidored MNLL subunit PF08040 IPR012575
NADH_ub_rd_NUML NADH-ubiquinone reductase complex 1 MLRQ subunit PF10526 IPR019550
NADPH_Ox Respiratory burst NADPH oxidase PF08414 IPR013623
NAD_binding_1 Oxidoreductase NAD-binding domain PF00175 IPR001433
NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase PF03446 IPR006115
NAD_binding_3 Homoserine dehydrogenase, NAD binding domain PF03447 IPR005106
NAD_binding_4 Male sterility protein PF07993 IPR013120
NAD_binding_5 Myo-inositol-1-phosphate synthase PF07994 IPR002587
NAD_binding_6 Ferric reductase NAD binding domain PF08030 IPR013121
NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PF07479 IPR006109
NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PF01210 IPR011128
NAD_kinase ATP-NAD kinase PF01513 IPR002504
NAD_synthase NAD synthase PF02540 IPR022310
NaeI Restriction endonuclease NaeI PF09126 IPR015210
NAF NAF domain PF03822 IPR004041
NAF1 NAF1 domain PF05492
NAGidase beta-N-acetylglucosaminidase PF07555 IPR011496
NAGLU Alpha-N-acetylglucosaminidase (NAGLU) PF05089 IPR007781
Nairovirus_M Nairovirus M polyprotein-like PF07948 IPR012487
Nairo_nucleo Nucleocapsid N protein PF02477 IPR003486
NAM No apical meristem (NAM) protein PF02365 IPR003441
NanE Putative N-acetylmannosamine-6-phosphate epimerase PF04131 IPR007260
Nanovirus_C8 Nanovirus component 8 (C8) protein PF05629 IPR008706
Nanovirus_coat Nanovirus coat protein PF04660 IPR006753
NAP Nucleosome assembly protein (NAP) PF00956 IPR002164
NapB Nitrate reductase cytochrome c-type subunit (NapB) PF03892 IPR005591
NapD NapD protein PF03927 IPR005623
NapE Periplasmic nitrate reductase protein NapE PF06796 IPR010649
NAPRTase Nicotinate phosphoribosyltransferase (NAPRTase) family PF04095 IPR015977
NARG2_C NMDA receptor-regulated gene protein 2 PF10505 IPR019535
NAS Nicotianamine synthase protein PF03059
NatB_MDM20 N-acetyltransferase B complex (NatB) non catalytic subunit PF09797 IPR019183
Na_Ala_symp Sodium:alanine symporter family PF01235 IPR001463
Na_Ca_ex Sodium/calcium exchanger protein PF01699 IPR004837
Na_H_antiporter Na+/H+ antiporter family PF03553 IPR018461
Na_H_antiport_1 Na+/H+ antiporter 1 PF06965 IPR004670
Na_H_Exchanger Sodium/hydrogen exchanger family PF00999 IPR006153
Na_K-ATPase Sodium / potassium ATPase beta chain PF00287 IPR000402
Na_Pi_cotrans Na+/Pi-cotransporter PF02690 IPR003841
Na_sulph_symp Sodium:sulfate symporter transmembrane region PF00939 IPR001898
Na_trans_assoc Sodium ion transport-associated PF06512 IPR010526
NB NB glycoprotein PF04159 IPR007288
NB-ARC NB-ARC domain PF00931 IPR002182
NblA Phycobilisome degradation protein nblA PF04485 IPR007574
NBP1 Fungal Nap binding protein NBP1 PF08537 IPR013743
Nbs1_C DNA damage repair protein Nbs1 PF08599 IPR013908
NC NC domain PF04970 IPR007053
NCA2 ATP synthase regulation protein NCA2 PF08637 IPR013946
NCD1 NAB conserved region 1 (NCD1) PF04904 IPR006988
NCD2 NAB conserved region 2 (NCD2) PF04905 IPR006989
NCD3G Nine Cysteines Domain of family 3 GPCR PF07562 IPR011500
Nckap1 Membrane-associated apoptosis protein PF09735 IPR019137
Ndc1_Nup Nucleoporin protein Ndc1-Nup PF09531 IPR019049
Ndc80_HEC HEC/Ndc80p family PF03801 IPR005550
NdhL NADH dehydrogenase transmembrane subunit PF10716 IPR019654
NDK Nucleoside diphosphate kinase PF00334 IPR001564
Ndr Ndr family PF03096 IPR004142
NDT80_PhoG NDT80 / PhoG like DNA-binding family PF05224 IPR007888
NDUFA12 NADH ubiquinone oxidoreductase subunit NDUFA12 PF05071 IPR007763
NDUFB10 NADH-ubiquinone oxidoreductase subunit 10 PF10249 IPR019377
Ndufs5 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa PF10200 IPR019342
NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit family PF08122 IPR012576
NDUF_B4 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) PF07225
NDUF_B5 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit PF09781 IPR019173
NDUF_B6 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit PF09782 IPR019174
NDUF_B7 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) PF05676 IPR008698
NDUF_B8 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) PF05821
NDUF_C2 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) PF06374 IPR009423
NEAT Iron Transport-associated domain PF05031 IPR006635
Nebulin Nebulin repeat PF00880 IPR000900
nec1 Virulence protein nec1 PF10379 IPR018836
Nefa_Nip30_N N-terminal domain of NEFA-interacting nuclear protein NIP30 PF10187 IPR019331
Neil1-DNA_bind Endonuclease VIII-like 1, DNA bind PF09292 IPR015371
Neisseria_PilC Neisseria PilC protein PF05567 IPR008707
Neisseria_TspB Neisseria meningitidis TspB protein PF05616 IPR008708
Neocarzinostat Neocarzinostatin family PF00960 IPR002186
Neogenin_C Neogenin C-terminus PF06583 IPR010560
NEP Uncharacterised conserved protein PF10167 IPR019320
Nepo_coat Nepovirus coat protein, central domain PF03391 IPR005054
Nepo_coat_C Nepovirus coat protein, C-terminal domain PF03688 IPR005305
Nepo_coat_N Nepovirus coat protein, N-terminal domain PF03689 IPR005306
NERD Nuclease-related domain PF08378 IPR011528
NESP55 Neuroendocrine-specific golgi protein P55 (NESP55) PF06390 IPR009434
NeuB NeuB family PF03102 IPR013132
Neugrin Neugrin PF06413 IPR010487
Neur Neuraminidase PF00064 IPR001860
Neuralized Neuralized PF07177 IPR006573
Neural_ProG_Cyt Neural chondroitin sulphate proteoglycan cytoplasmic domain PF06567 IPR009505
Neuregulin Neuregulin family PF02158 IPR002154
Neurexophilin Neurexophilin PF06312
Neurochondrin Neurochondrin PF05536
Neurokinin_B Neurokinin B PF03823 IPR003635
Neuromodulin Neuromodulin PF06614 IPR017454
Neuromodulin_N Gap junction protein N-terminal region PF10580 IPR018947
Neuroparsin Neuroparsin PF07327 IPR010850
Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain PF02931 IPR006202
Neur_chan_memb Neurotransmitter-gated ion-channel transmembrane region PF02932 IPR006029
Nexin_C Sorting nexin C terminal PF08628 IPR013937
NfeD NfeD-like PF01957 IPR002810
NfI_DNAbd_pre-N Nuclear factor I protein pre-N-terminus PF10524 IPR019548
Nfu_N Scaffold protein Nfu/NifU N terminal PF08712 IPR014824
NGF Nerve growth factor family PF00243 IPR002072
NgoMIV_restric NgoMIV restriction enzyme PF09015 IPR015105
NGP1NT NGP1NT (NUC091) domain PF08153 IPR012971
Nha1_C Alkali metal cation/H+ antiporter Nha1 C terminus PF08619 IPR013928
NhaB Bacterial Na+/H+ antiporter B (NhaB) PF06450 IPR004671
NHase_alpha Nitrile hydratase, alpha chain PF02979 IPR004232
NHase_beta Nitrile hydratase beta subunit PF02211
NHL NHL repeat PF01436 IPR001258
NHR2 NHR2 domain like PF08788 IPR014896
Nic96 Nup93/Nic96 PF04097 IPR007231
Nicastrin Nicastrin PF05450 IPR008710
NICE-3 NICE-3 protein PF07406 IPR010876
NicO High-affinity nickel-transport protein PF03824 IPR011541
NID Nmi/IFP 35 domain (NID) PF07292 IPR009909
NIDO Nidogen-like PF06119 IPR003886
NIF NLI interacting factor-like phosphatase PF03031 IPR004274
Nif11 Nitrogen fixation protein of unknown function PF07862 IPR012903
NIF3 NIF3 (NGG1p interacting factor 3) PF01784 IPR002678
NiFeSe_Hases Nickel-dependent hydrogenase PF00374 IPR001501
NifQ NifQ PF04891 IPR006975
NifT NifT/FixU protein PF06988 IPR009727
NifU NifU-like domain PF01106 IPR001075
NifU_N NifU-like N terminal domain PF01592 IPR002871
NifW Nitrogen fixation protein NifW PF03206 IPR004893
NifZ NifZ domain PF04319 IPR007415
NikM Nickel uptake substrate-specific transmembrane region PF10670 IPR019613
NikR_C NikR C terminal nickel binding domain PF08753 IPR014864
NIL NIL domain PF09383 IPR018449
NinB NinB protein PF05772 IPR008711
NinE NINE Protein PF05322 IPR007986
NinF NinF protein PF05810 IPR008712
NinG Bacteriophage Lambda NinG protein PF05766 IPR008713
Ninjurin Ninjurin PF04923 IPR007007
NIPSNAP NIPSNAP PF07978 IPR012577
NIP_1 Necrosis inducing protein-1 PF08995 IPR015087
NIR_SIR Nitrite and sulphite reductase 4Fe-4S domain PF01077 IPR006067
NIR_SIR_ferr Nitrite/Sulfite reductase ferredoxin-like half domain PF03460 IPR005117
NIT Nitrate and nitrite sensing PF08376 IPR013587
Nitrate_red_del Nitrate reductase delta subunit PF02613 IPR020945
Nitrate_red_gam Nitrate reductase gamma subunit PF02665 IPR003816
Nitrophorin Nitrophorin PF02087 IPR002351
Nitroreductase Nitroreductase family PF00881 IPR000415
Nitro_FeMo-Co Dinitrogenase iron-molybdenum cofactor PF02579 IPR003731
Nitr_red_assoc Conserved nitrate reductase-associated protein (Nitr_red_assoc) PF09655 IPR013481
Nit_Regul_Hom Uncharacterized protein, homolog of nitrogen regulatory protein PII PF10126 IPR019296
Ni_hydr_CYTB Prokaryotic cytochrome b561 PF01292 IPR011577
NKAIN Na,K-Atpase Interacting protein PF05640 IPR008516
NKWYS Putative capsular polysaccharide synthesis protein PF10364 IPR018831
NLBH Neuraminyllactose-binding hemagglutinin precursor (NLBH) PF05211 IPR007876
NLE NLE (NUC135) domain PF08154 IPR012972
NLPC_P60 NlpC/P60 family PF00877 IPR000064
NlpE Uncharacterized lipoprotein NlpE involved in copper resistance PF04170 IPR007298
NMD3 NMD3 family PF04981 IPR007064
NMDAR2_C N-methyl D-aspartate receptor 2B3 C-terminus PF10565 IPR018884
NMN_transporter Nicotinamide mononucleotide transporter PF04973 IPR006419
NmrA NmrA-like family PF05368 IPR008030
NMT Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain PF01233 IPR022676
NMT1 NMT1/THI5 like PF09084
NMT_C Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain PF02799 IPR022677
NMU Neuromedin U PF02070 IPR008199
Nnf1 Nnf1 PF03980 IPR007128
NNMT_PNMT_TEMT NNMT/PNMT/TEMT family PF01234 IPR000940
NnrS NnrS protein PF05940 IPR010266
NnrU NnrU protein PF07298 IPR009915
NOA36 NOA36 protein PF06524 IPR010531
NOB1_Zn_bind Nin one binding (NOB1) Zn-ribbon like PF08772 IPR014881
Noc2 Noc2p family PF03715 IPR005343
NOC3p Nucleolar complex-associated protein PF07540 IPR011501
NOD NOTCH protein PF06816 IPR010660
NodA Nodulation protein A (NodA) PF02474 IPR003484
NODP NOTCH protein PF07684 IPR011656
NodS Nodulation protein S (NodS) PF05401 IPR008715
Nodulin Nodulin PF02451 IPR003387
Nodulin-like Nodulin-like PF06813 IPR010658
Nodulin_late Late nodulin protein PF07127 IPR009810
NodZ Nodulation protein Z (NodZ) PF05830 IPR008716
Nod_GRP Nodule-specific GRP repeat PF07806 IPR012488
NOG1 Nucleolar GTP-binding protein 1 (NOG1) PF06858 IPR010674
NOGCT NOGCT (NUC087) domain PF08155 IPR012973
Noggin Noggin PF05806 IPR008717
NOI Cleavage site for pathogenic type III effector avirulence factor Avr PF05627 IPR008700
Nol1_Nop2_Fmu NOL1/NOP2/sun family PF01189 IPR001678
NolV Nodulation protein NolV PF06635 IPR010586
NolX NolX protein PF05819 IPR008718
Nop Putative snoRNA binding domain PF01798 IPR002687
Nop10p Nucleolar RNA-binding protein, Nop10p family PF04135 IPR007264
Nop14 Nop14-like family PF04147 IPR007276
Nop16 Ribosome biogenesis protein Nop16 PF09420 IPR019002
Nop25 Nucleolar protein 12 (25kDa) PF09805 IPR019186
Nop52 Nucleolar protein,Nop52 PF05997 IPR010301
Nop53 Nop53 (60S ribosomal biogenesis) PF07767 IPR011687
NOP5NT NOP5NT (NUC127) domain PF08156 IPR012974
NOPS NOPS (NUC059) domain PF08075 IPR012975
NosD Periplasmic copper-binding protein (NosD) PF05048 IPR007742
NOSIC NOSIC (NUC001) domain PF08060 IPR012976
NosL NosL PF05573 IPR008719
Not1 CCR4-Not complex component, Not1 PF04054 IPR007196
NOT2_3_5 NOT2 / NOT3 / NOT5 family PF04153 IPR007282
Not3 Not1 N-terminal domain, CCR4-Not complex component PF04065 IPR007207
Notch LNR domain PF00066 IPR000800
Novirhabdo_Nv Viral hemorrhagic septicemia virus non-virion protein PF05554 IPR008720
NOZZLE Plant transcription factor NOZZLE PF08744 IPR014855
NO_synthase Nitric oxide synthase, oxygenase domain PF02898 IPR004030
NPCBM NPCBM/NEW2 domain PF08305 IPR013222
NPCBM_assoc NPCBM-associated, NEW3 domain of alpha-galactosidase PF10633 IPR018905
NPCC Nuclear pore complex component PF08058 IPR012578
NPD 2-nitropropane dioxygenase PF03060 IPR004136
NPDC1 Neural proliferation differentiation control-1 protein (NPDC1) PF06809 IPR009635
NPH3 NPH3 family PF03000 IPR004249
NPHI_C Nucleoside triphosphatase I C-terminal PF08469 IPR013676
NPIP Nuclear pore complex interacting protein (NPIP) PF06409 IPR009443
NPL4 NPL4 family PF05021 IPR007717
NPP Pro-opiomelanocortin, N-terminal region PF08384 IPR013593
NPP1 Necrosis inducing protein (NPP1) PF05630 IPR008701
NPR NPR nonapeptide repeat PF07391 IPR010867
NPR2 Nitrogen permease regulator 2 PF06218 IPR009348
NPV_P10 Nucleopolyhedrovirus P10 protein PF05531 IPR008702
NQR2_RnfD_RnfE NQR2, RnfD, RnfE family PF03116 IPR004338
NQRA Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PF05896 IPR008703
Nramp Natural resistance-associated macrophage protein PF01566 IPR001046
Nrap Nrap protein PF03813 IPR005554
Nrf1_activ_bdg Nrf1 activator activation site binding domain PF10492 IPR019526
Nrf1_DNA-bind NLS-binding and DNA-binding and dimerisation domains of Nrf1 PF10491 IPR019525
NrfD Polysulphide reductase, NrfD PF03916 IPR005614
NRIF3 Nuclear receptor co-activator NRIF3 PF06729 IPR009601
NRPS Nonribosomal peptide synthase PF08415 IPR013624
NS3_envE Non-structural protein NS3/Small envelope protein E PF02723 IPR003873
Nse4 Nse4 PF08743 IPR014854
Nse5 DNA repair protein Nse5 PF08691 IPR014803
NSF Aromatic-di-Alanine (AdAR) repeat PF02071 IPR000744
NSP10 RNA synthesis protein NSP10 PF09401 IPR018995
NSP11 NSP11 PF06471 IPR009466
NSP13 Coronavirus NSP13 PF06460 IPR009461
Nsp1_C Nsp1-like C-terminal region PF05064 IPR007758
nsp7 nsp7 replicase PF08716 IPR014828
nsp8 nsp8 replicase PF08717 IPR014829
nsp9 nsp9 replicase PF08710 IPR014822
NT5C 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) PF06941 IPR010708
NtA Agrin NtA domain PF03146 IPR004850
NTase_sub_bind Nucleotidyltransferase substrate binding protein like PF08780 IPR010235
NTF2 Nuclear transport factor 2 (NTF2) domain PF02136 IPR002075
NTNH_C Nontoxic nonhaemagglutinin C-terminal PF08470 IPR013677
NTP_transferase Nucleotidyl transferase PF00483 IPR005835
NTP_transf_2 Nucleotidyltransferase domain PF01909 IPR002934
NTR UNC-6/NTR/C345C module PF01759 IPR018933
NuA4 Histone acetyltransferase subunit NuA4 PF09340 IPR015418
Nuc-transf Predicted nucleotidyltransferase PF10127 IPR018775
NUC129 NUC129 domain PF08157 IPR012579
NUC130_3NT NUC130/3NT domain PF08158 IPR012977
NUC153 NUC153 domain PF08159 IPR012580
NUC156 NUC156 domain PF08160
NUC173 NUC173 domain PF08161 IPR012978
NUC189 NUC189 domain PF08162
NUC194 NUC194 domain PF08163 IPR012582
NUC201 NUC201 domain PF08167 IPR012583
NUC202 NUC202 domain PF08166 IPR012980
NUC205 NUC205 domain PF08168 IPR012584
Nuclease_act Anticodon nuclease activator family PF08133 IPR012585
Nucleoplasmin Nucleoplasmin PF03066 IPR004301
Nucleoporin Non-repetitive/WGA-negative nucleoporin PF03177 IPR007187
Nucleoporin2 Nucleoporin autopeptidase PF04096 IPR007230
Nucleopor_Nup85 Nup85 Nucleoporin PF07575 IPR011502
Nucleoside_tran Nucleoside transporter PF01733 IPR002259
Nucleos_tra2_C Na+ dependent nucleoside transporter C-terminus PF07662 IPR011657
Nucleos_tra2_N Na+ dependent nucleoside transporter N-terminus PF01773 IPR002668
Nucleotid_trans Nucleotide-diphospho-sugar transferase PF03407 IPR005069
Nucleo_LEF-12 Nucleopolyhedrovirus LEF-12 protein PF06256 IPR009365
Nucleo_P87 Nucleopolyhedrovirus capsid protein P87 PF07267 IPR009893
Nuc_deoxyrib_tr Nucleoside 2-deoxyribosyltransferase PF05014 IPR007710
Nuc_H_symport Nucleoside H+ symporter PF03825
Nuc_rec_co-act Nuclear receptor coactivator PF08815 IPR014920
Nuc_sug_transp Nucleotide-sugar transporter PF04142 IPR007271
NUDE_C NUDE protein, C-terminal conserved region PF04880 IPR006964
NUDIX NUDIX domain PF00293 IPR000086
NUDIX-like NADH pyrophosphatase-like rudimentary NUDIX domain PF09296 IPR015375
Nuf2 Nuf2 family PF03800 IPR005549
NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) PF10453 IPR019496
NuiA Nuclease A inhibitor-like protein PF07924 IPR012489
NumbF NUMB domain PF06311 IPR010449
NUMOD1 NUMOD1 domain PF07453 IPR010896
NUMOD3 NUMOD3 motif PF07460 IPR003611
NUMOD4 NUMOD4 motif PF07463 IPR010902
NUP Purine nucleoside permease (NUP) PF06516 IPR009486
Nup133 Nup133 nucleoporin PF04044
Nup133_N Nup133 N terminal like PF08801 IPR014908
Nup153 Nucleoporin Nup153-like PF08604 IPR013913
Nup188 Nucleoporin subcomplex protein binding to Pom34 PF10487 IPR018864
NUP50 NUP50 (Nucleoporin 50 kDa) PF08911 IPR015007
Nup84_Nup100 Nuclear pore protein 84 / 107 PF04121 IPR007252
Nup88 Nuclear pore component PF10168 IPR019321
Nup_retrotrp_bd Retro-transposon transporting motif PF10599 IPR018892
NurA NurA domain PF09376 IPR018977
NusA_N NusA N-terminal domain PF08529 IPR013735
NusB NusB family PF01029 IPR006027
NusG Transcription termination factor nusG PF02357 IPR006645
Nyv1_N Vacuolar R-SNARE Nyv1 N terminal PF09426 IPR019005
N_methyl Prokaryotic N-terminal methylation motif PF07963 IPR012902
O-FucT GDP-fucose protein O-fucosyltransferase PF10250 IPR019378
OAD_beta Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit PF03977 IPR005661
OAD_gamma Oxaloacetate decarboxylase, gamma chain PF04277 IPR005899
OapA Opacity-associated protein A LysM-like domain PF04225 IPR007340
OapA_N Opacity-associated protein A N-terminal motif PF08525 IPR013731
OAR OAR domain PF03826 IPR003654
OAS1_C 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus PF10421 IPR018952
OATP Organic Anion Transporter Polypeptide (OATP) family PF03137 IPR004156
OB_RNB Ribonuclease B OB domain PF08206 IPR013223
Occludin_ELL Occludin homology domain PF07303 IPR010844
OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family PF02423 IPR003462
OCIA Ovarian carcinoma immunoreactive antigen (OCIA) PF07051 IPR009764
Ocnus Janus/Ocnus family (Ocnus) PF05005 IPR007702
ocr DNA mimic ocr PF08684 IPR014798
Octapeptide Octapeptide repeat PF03373 IPR005038
Octopine_DH NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain PF02317 IPR003421
Ocular_alb Ocular albinism type 1 protein PF02101 IPR001414
ODC_AZ Ornithine decarboxylase antizyme PF02100 IPR002993
ODV-E18 Occlusion-derived virus envelope protein ODV-E18 PF10717 IPR019655
OEP Outer membrane efflux protein PF02321 IPR003423
Oest_recep Oestrogen receptor PF02159 IPR001292
Ofd1_CTDD Oxoglutarate and iron-dependent oxygenase C-terminal degradation domain PF10637 IPR019601
OGFr_III Opioid growth factor receptor repeat PF04680 IPR006770
OGFr_N Opioid growth factor receptor (OGFr) conserved region PF04664 IPR006757
OGG_N 8-oxoguanine DNA glycosylase, N-terminal domain PF07934 IPR012904
Ogr_Delta Ogr/Delta-like zinc finger PF04606 IPR007684
OHCU_decarbox OHCU decarboxylase PF09349 IPR018020
OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain PF01276 IPR000310
OKR_DC_1_C Orn/Lys/Arg decarboxylase, C-terminal domain PF03711 IPR008286
OKR_DC_1_N Orn/Lys/Arg decarboxylase, N-terminal domain PF03709 IPR005308
Ole-e-6 Pollen allergen ole e 6 PF09253 IPR015333
Oleosin Oleosin PF01277 IPR000136
OLF Olfactomedin-like domain PF02191 IPR003112
Olfactory_mark Olfactory marker protein PF06554 IPR009103
oligo_HPY Oligopeptide/dipeptide transporter, C-terminal region PF08352 IPR013563
Omega-toxin Omega-atracotoxin PF06357 IPR009415
Omega_Repress Omega Transcriptional Repressor PF07764 IPR011686
OmpA OmpA family PF00691 IPR006665
OmpA_membrane OmpA-like transmembrane domain PF01389 IPR000498
OMPdecase Orotidine 5'-phosphate decarboxylase / HUMPS family PF00215 IPR001754
OmpH Outer membrane protein (OmpH-like) PF03938 IPR005632
Omptin Omptin family PF01278 IPR000036
OmpW OmpW family PF03922 IPR005618
OMP_19 Bacterial outer membrane lipoprotein omp19 PF06604
OMS28_porin OMS28 porin PF03532 IPR000839
Omt_N O-methyltransferase N-terminus PF02409
OPA3 Optic atrophy 3 protein (OPA3) PF07047 IPR010754
Opacity Opacity family porin protein PF02462 IPR003394
OpcA Outer membrane protein OpcA PF07239 IPR009876
OpcA_G6PD_assem Glucose-6-phosphate dehydrogenase subunit PF10128 IPR019297
OpgC_C OpgC protein, C terminal domain PF10129 IPR014550
Opi1 Transcription factor Opi1 PF08618 IPR013927
Opiods_neuropep Vertebrate endogenous opioids neuropeptide PF01160 IPR006024
OprB Carbohydrate-selective porin, OprB family PF04966 IPR007049
OprD outer membrane porin, OprD family PF03573 IPR005318
OprF OprF membrane domain PF05736 IPR008722
OPT OPT oligopeptide transporter protein PF03169 IPR004813
OpuAC Substrate binding domain of ABC-type glycine betaine transport system PF04069 IPR007210
Opy2 Opy2 protein PF09463 IPR018571
Op_neuropeptide Opioids neuropeptide PF08035 IPR013532
Orbi_NS1 Orbivirus non-structural protein NS1, or hydrophobic tubular protein PF01718 IPR002630
Orbi_NS3 Orbivirus NS3 PF01616 IPR002565
Orbi_VP1 Orbivirus RNA-dependent RNA polymerase (VP1) PF05788 IPR008723
Orbi_VP2 Orbivirus outer capsid protein VP2 PF00898 IPR001742
Orbi_VP3 Orbivirus VP3 (T2) protein PF01700 IPR002614
Orbi_VP4 Orbivirus VP4 core protein PF05059 IPR007753
Orbi_VP5 Orbivirus outer capsid protein VP5 PF00901 IPR000145
Orbi_VP6 Orbivirus helicase VP6 PF01516 IPR001399
Orbi_VP7 Orbivirus inner capsid protein VP7 PF00897 IPR001803
ORC2 Origin recognition complex subunit 2 PF04084 IPR007220
ORC3_N Origin recognition complex (ORC) subunit 3 N-terminus PF07034 IPR010748
ORC6 Origin recognition complex subunit 6 (ORC6) PF05460 IPR008721
Orexin Prepro-orexin PF02072 IPR001704
Orexin_rec2 Orexin receptor type 2 PF03827 IPR004060
ORF11CD3 ORF11CD3 domain PF10549 IPR018877
ORF6C ORF6C domain PF10552 IPR018878
ORF6N ORF6N domain PF10543 IPR018873
OrgA_MxiK Bacterial type III secretion apparatus protein (OrgA_MxiK) PF09482 IPR013388
ORMDL ORMDL family PF04061 IPR007203
Ornatin Ornatin PF02088 IPR002463
Orn_Arg_deC_N Pyridoxal-dependent decarboxylase, pyridoxal binding domain PF02784 IPR022644
Orn_DAP_Arg_deC Pyridoxal-dependent decarboxylase, C-terminal sheet domain PF00278 IPR022643
Orthopox_35kD 35kD major secreted virus protein PF02250 IPR003184
Orthopox_A36R Orthopoxvirus A36R protein PF05950 IPR010274
Orthopox_A43R Orthopoxvirus A43R protein PF06517 IPR009487
Orthopox_A47 Orthopoxvirus A47 protein PF06334 IPR009402
Orthopox_A49R Orthopoxvirus A49R protein PF06489 IPR009473
Orthopox_A5L Orthopoxvirus A5L protein PF06193 IPR010396
Orthopox_B11R Orthopoxvirus B11R protein PF07033 IPR009754
Orthopox_C1 Orthopoxvirus C1 protein PF05759
Orthopox_C10L Orthopoxvirus C10L protein PF07020 IPR009748
Orthopox_F14 Orthopoxvirus F14 protein PF06076 IPR009280
Orthopox_F6 Orthopoxvirus F6 protein PF06601 IPR009521
Orthopox_F7 Orthopoxvirus F7 protein PF05813 IPR008725
Orthopox_F8 Orthopoxvirus F8 protein PF05886 IPR008726
Orthopox_N1 Orthopoxvirus N1 protein PF06227 IPR009353
Orthoreo_P10 Orthoreovirus membrane fusion protein p10 PF07204 IPR009854
Orthoreo_P17 Orthoreovirus P17 protein PF07272 IPR009897
OS-D Insect pheromone-binding family, A10/OS-D PF03392 IPR005055
OSCP ATP synthase delta (OSCP) subunit PF00213 IPR000711
Oscp1 Organic solute transport protein 1 PF10188 IPR019332
OsmC OsmC-like protein PF02566 IPR003718
Osmo_CC Osmosensory transporter coiled coil PF08946 IPR015041
Osmo_MPGsynth Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) PF09488 IPR012812
OspD Borrelia outer surface protein D (OspD) PF03207 IPR004894
OspE Borrelia outer surface protein E PF02471 IPR003483
OST3_OST6 OST3 / OST6 family PF04756 IPR021149
Ost4 Oligosaccaryltransferase PF10215 IPR018943
OstA OstA-like protein PF03968 IPR005653
OstA_C Organic solvent tolerance protein PF04453 IPR007543
Osteopontin Osteopontin PF00865 IPR002038
Osteoregulin Osteoregulin PF07175 IPR009837
OSTMP1 Osteopetrosis-associated transmembrane protein 1 precursor PF09777 IPR019172
OTCace Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PF00185 IPR006131
OTCace_N Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PF02729 IPR006132
OTU OTU-like cysteine protease PF02338 IPR003323
Oxidored-like Oxidoreductase-like protein, N-terminal PF09791 IPR019180
Oxidored_FMN NADH:flavin oxidoreductase / NADH oxidase family PF00724 IPR001155
Oxidored_molyb Oxidoreductase molybdopterin binding domain PF00174 IPR000572
Oxidored_nitro Nitrogenase component 1 type Oxidoreductase PF00148 IPR000510
Oxidored_q1 NADH-Ubiquinone/plastoquinone (complex I), various chains PF00361 IPR001750
Oxidored_q1_C NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus PF01010 IPR002128
Oxidored_q1_N NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PF00662 IPR001516
Oxidored_q2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PF00420 IPR001133
Oxidored_q3 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PF00499 IPR001457
Oxidored_q4 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PF00507 IPR000440
Oxidored_q5_N NADH-ubiquinone oxidoreductase chain 4, amino terminus PF01059 IPR000260
Oxidored_q6 NADH ubiquinone oxidoreductase, 20 Kd subunit PF01058 IPR006137
Oxysterol_BP Oxysterol-binding protein PF01237 IPR000648
ox_reductase_C Putative oxidoreductase C terminal PF08635 IPR013944
P-II Nitrogen regulatory protein P-II PF00543 IPR002187
P-mevalo_kinase Phosphomevalonate kinase PF04275 IPR005919
P120R P120R (NUC006) repeat PF08062 IPR012586
P16-Arc ARP2/3 complex 16 kDa subunit (p16-Arc) PF04699 IPR006789
P19Arf_N Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus PF07392 IPR010868
P2 P2 response regulator binding domain PF07194 IPR010808
P21-Arc ARP2/3 complex ARPC3 (21 kDa) subunit PF04062 IPR007204
P22_AR_C P22AR C-terminal domain PF10548 IPR018876
P22_AR_N P22_AR N-terminal domain PF10547 IPR018875
p25-alpha p25-alpha PF05517 IPR008907
P2X_receptor ATP P2X receptor PF00864 IPR001429
P2_Phage_GpR P2 phage tail completion protein R (GpR) PF06891 IPR009678
P30 Mycoplasma P30 protein PF07390 IPR009975
P34-Arc Arp2/3 complex, 34 kD subunit p34-Arc PF04045 IPR007188
P35 Apoptosis preventing protein PF02331 IPR003429
P3A Poliovirus 3A protein like PF08727 IPR014838
p450 Cytochrome P450 PF00067 IPR001128
p47_phox_C NADPH oxidase subunit p47Phox, C terminal domain PF08944 IPR015039
P4Ha_N Prolyl 4-Hydroxylase alpha-subunit, N-terminal region PF08336 IPR013547
P53 P53 DNA-binding domain PF00870 IPR011615
P53_TAD P53 transactivation motif PF08563 IPR013872
P53_tetramer P53 tetramerisation motif PF07710 IPR010991
P63C P63C domain PF10546 IPR018874
P68HR P68HR (NUC004) repeat PF08061 IPR012587
PA PA domain PF02225 IPR003137
PA-IIL Fucose-binding lectin II (PA-IIL) PF07472 IPR010907
PA-IL PA-IL-like protein PF07828 IPR012905
PA14 PA14 domain PF07691
PA14_2 GLEYA domain PF10528 IPR018871
PA26 PA26 p53-induced protein (sestrin) PF04636 IPR006730
PA28_alpha Proteasome activator pa28 alpha subunit PF02251 IPR003185
PA28_beta Proteasome activator pa28 beta subunit PF02252 IPR003186
PaaA_PaaC Phenylacetic acid catabolic protein PF05138 IPR007814
PaaB Phenylacetic acid degradation B PF06243 IPR009359
PAAD_DAPIN PAAD/DAPIN/Pyrin domain PF02758 IPR004020
PAAR_motif PAAR motif PF05488 IPR008727
PaaX PaaX-like protein PF07848 IPR012906
PaaX_C PaaX-like protein C-terminal domain PF08223 IPR013225
PABP Poly-adenylate binding protein, unique domain PF00658 IPR002004
Pacifastin_I Pacifastin inhibitor (LCMII) PF05375 IPR008037
Pacs-1 PACS-1 cytosolic sorting protein PF10254 IPR019381
PACT_coil_coil Pericentrin-AKAP-450 domain of centrosomal targeting protein PF10495 IPR019528
PAD Protein-arginine deiminase (PAD) PF03068 IPR013530
PadR Transcriptional regulator PadR-like family PF03551 IPR005149
PADR1 PADR1 (NUC008) domain PF08063 IPR012982
PAD_M Protein-arginine deiminase (PAD) middle domain PF08527 IPR013733
PAD_N Protein-arginine deiminase (PAD) N-terminal domain PF08526 IPR013732
PAD_porph Porphyromonas-type peptidyl-arginine deiminase PF04371 IPR007466
PAE Pectinacetylesterase PF03283
PAF-AH_p_II Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II PF03403
Paf1 Paf1 PF03985 IPR007133
Paf67 RNA polymerase I-associated factor PAF67 PF10255 IPR019382
PagL Lipid A 3-O-deacylase (PagL) PF09411 IPR018550
PagP Antimicrobial peptide resistance and lipid A acylation protein PagP PF07017 IPR009746
PAH Paired amphipathic helix repeat PF02671 IPR003822
Paired_CXXCH_1 Doubled CXXCH motif (Paired_CXXCH_1) PF09699
PAL Phenylalanine and histidine ammonia-lyase PF00221 IPR001106
Pal1 Pal1 cell morphology protein PF08316 IPR013226
PalH PalH/RIM21 PF08733 IPR014844
PalI pH-response regulator, PalI / Rim9 PF08739
Palm_thioest Palmitoyl protein thioesterase PF02089 IPR002472
PALP Pyridoxal-phosphate dependent enzyme PF00291 IPR001926
Pam16 Pam16 PF03656 IPR005341
Pam17 Mitochondrial import protein Pam17 PF08566 IPR013875
PAM2 Ataxin-2 C-terminal region PF07145 IPR009818
Pantoate_ligase Pantoate-beta-alanine ligase PF02569 IPR003721
Pantoate_transf Ketopantoate hydroxymethyltransferase PF02548 IPR003700
PAN_1 PAN domain PF00024 IPR003014
PAN_2 PAN-like domain PF08276 IPR013227
PAN_3 PAN-like domain PF08277 IPR006583
PaO Pheophorbide a oxygenase PF08417 IPR013626
PAP1 Transcription factor PAP1 PF08601 IPR013910
PAP2 PAP2 superfamily PF01569 IPR000326
PAPA-1 PAPA-1-like conserved region PF04795 IPR006880
PapB Adhesin biosynthesis transcription regulatory protein PF03333 IPR004356
PapG_C PapG chaperone-binding domain PF03628 IPR005309
PapG_N PapG carbohydrate binding domain PF03627 IPR005310
Papilloma_E5 Papillomavirus E5 PF03025 IPR004270
Papilloma_E5A Papillomavirus E5A protein PF05776 IPR008736
Papo_T_antigen T-antigen specific domain PF02380 IPR003354
PAPS_reduct Phosphoadenosine phosphosulfate reductase family PF01507 IPR002500
PAP_assoc Poly(A) polymerase PF03828 IPR002058
PAP_central Poly(A) polymerase central domain PF04928 IPR007012
Pap_E4 E4 protein PF02711 IPR003861
PAP_fibrillin PAP_fibrillin PF04755 IPR006843
PAP_PilO Pilin accessory protein (PilO) PF06864 IPR009663
PAP_RNA-bind Poly(A) polymerase predicted RNA binding domain PF04926 IPR007010
PAR1 PAR1 protein PF06521 IPR009489
ParA ParA/MinD ATPase like PF10609 IPR019591
Paralemmin Paralemmin PF03285 IPR004965
Paramecium_SA Paramecium surface antigen domain PF01508 IPR002895
Paramyxovirus_V Paramyxovirus structural protein V PF06641
Paramyxo_C Paramyxovirus non-structural protein c PF01692 IPR002608
Paramyxo_ncap Paramyxovirus nucleocapsid protein PF00973 IPR002021
Paramyxo_NS_C Non-structural protein C PF02725 IPR003875
Paramyxo_P Paramyxovirinae P phosphoprotein C-terminal region PF01806 IPR002693
Paramyx_P_V Paramyxovirus P/V phosphoprotein PF03210 IPR004897
Paramyx_RNA_pol Paramyxovirus RNA dependent RNA polymerase PF00946 IPR001016
Parathyroid Parathyroid hormone family PF01279 IPR001415
ParB ParB family PF08775 IPR014884
ParBc ParB-like nuclease domain PF02195 IPR003115
ParBc_2 Putative ParB-like nuclease PF08857 IPR014956
ParcG Parkin co-regulated protein PF10274 IPR019399
ParD Antitoxin ParD PF09386 IPR018985
Pardaxin Pardaxin PF07425 IPR009990
Parecho_VpG Parechovirus Genome-linked protein PF06344 IPR009407
PaREP1 Archaeal PaREP1/PaREP8 family PF05942 IPR010268
PaRep2a PaRep2a protein PF07903 IPR012490
PaRep2b PaRep2b protein PF07775 IPR011689
ParG ParG PF09274 IPR015354
PARG_cat Poly (ADP-ribose) glycohydrolase (PARG) PF05028 IPR007724
PARP Poly(ADP-ribose) polymerase catalytic domain PF00644 IPR012317
PARP_reg Poly(ADP-ribose) polymerase, regulatory domain PF02877 IPR004102
PARP_regulatory Poly A polymerase regulatory subunit PF01358 IPR000176
Parvo_coat Parvovirus coat protein VP2 PF00740 IPR001403
Parvo_coat_N Parvovirus coat protein VP1 PF08398 IPR013607
Parvo_NS1 Parvovirus non-structural protein NS1 PF01057 IPR001257
PAS PAS fold PF00989 IPR013767
PASTA PASTA domain PF03793 IPR005543
PAS_2 PAS fold PF08446 IPR013654
PAS_3 PAS fold PF08447 IPR013655
PAS_4 PAS fold PF08448 IPR013656
PAS_5 PAS domain PF07310 IPR009922
PAS_6 YheO-like PAS domain PF08348 IPR013559
Pas_Saposin Pas factor saposin fold PF09016 IPR015106
PAT1 Topoisomerase II-associated protein PAT1 PF09770 IPR019167
Patatin Patatin-like phospholipase PF01734 IPR002641
Patched Patched family PF02460 IPR003392
Pathogen_betaC1 Beta-satellite pathogenicity beta C1 protein PF09593 IPR018583
PAX 'Paired box' domain PF00292 IPR001523
Paxillin Paxillin family PF03535
PAXNEB PAXNEB protein PF05625 IPR008728
PAZ PAZ domain PF02170 IPR003100
PA_decarbox Phenolic acid decarboxylase (PAD) PF05870 IPR008729
PB1 PB1 domain PF00564 IPR000270
PBAN Pheromone biosynthesis activating neuropeptide (PBAN) PF05874 IPR008730
PBC PBC domain PF03792 IPR005542
PBCV_basic_adap PBCV-specific basic adaptor domain PF08789 IPR014897
PBD P21-Rho-binding domain PF00786 IPR000095
PBP Phosphatidylethanolamine-binding protein PF01161 IPR008914
PBP5_C Penicillin-binding protein 5, C-terminal domain PF07943 IPR012907
PBP_dimer Penicillin-binding Protein dimerisation domain PF03717 IPR005311
PBP_GOBP PBP/GOBP family PF01395 IPR006170
PBP_sp32 Proacrosin binding protein sp32 PF07222 IPR009865
PBS_linker_poly Phycobilisome Linker polypeptide PF00427 IPR001297
PC4 Transcriptional Coactivator p15 (PC4) PF02229 IPR003173
PCAF_N PCAF (P300/CBP-associated factor) N-terminal domain PF06466 IPR009464
Pcc1 Transcription factor Pcc1 PF09341
PCEMA1 Acidic phosphoprotein precursor PCEMA1 PF07418 IPR010882
PcF Phytotoxin PcF protein PF09461 IPR018570
PCI PCI domain PF01399 IPR000717
PCI_Csn8 COP9 signalosome, subunit CSN8 PF10075 IPR019280
PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PF01135 IPR000682
PCNA_C Proliferating cell nuclear antigen, C-terminal domain PF02747 IPR022649
PCNA_N Proliferating cell nuclear antigen, N-terminal domain PF00705 IPR022648
PCP Peridinin-chlorophyll A binding protein PF02429 IPR003376
PCP_red Proto-chlorophyllide reductase 57 kD subunit PF08369 IPR013580
PcrB PcrB family PF01884 IPR008205
PCRF PCRF domain PF03462 IPR005139
PC_rep Proteasome/cyclosome repeat PF01851 IPR002015
PD-C2-AF1 POU domain, class 2, associating factor 1 PF09310 IPR015389
PD40 WD40-like Beta Propeller Repeat PF07676 IPR011659
PDCD2_C Programmed cell death protein 2, C-terminal putative domain PF04194 IPR007320
PDCD9 Mitochondrial 28S ribosomal protein S30 (PDCD9) PF07147 IPR010793
PDE6_gamma Retinal cGMP phosphodiesterase, gamma subunit PF04868 IPR006952
PDE8 PDE8 phosphodiesterase PF08629 IPR013938
PDEase_I 3'5'-cyclic nucleotide phosphodiesterase PF00233 IPR002073
PDEase_II cAMP phosphodiesterases class-II PF02112 IPR000396
PDEase_I_N 3'5'-cyclic nucleotide phosphodiesterase N-terminal PF08499 IPR013706
PDGF Platelet-derived growth factor (PDGF) PF00341 IPR000072
PDGF_N Platelet-derived growth factor, N terminal region PF04692 IPR006782
PDH Prephenate dehydrogenase PF02153 IPR003099
PDR_assoc Plant PDR ABC transporter associated PF08370 IPR013581
PDR_CDR CDR ABC transporter PF06422 IPR010929
PDT Prephenate dehydratase PF00800 IPR001086
PduL Propanediol utilisation protein PduL PF06130 IPR008300
PduV-EutP Ethanolamine utilisation - propanediol utilisation PF10662
PdxA Pyridoxal phosphate biosynthetic protein PdxA PF04166 IPR005255
PdxJ Pyridoxal phosphate biosynthesis protein PdxJ PF03740 IPR004569
PDZ PDZ domain (Also known as DHR or GLGF) PF00595 IPR001478
PDZ_assoc PDZ-associated domain of NMDA receptors PF10600 IPR019583
PE PE family PF00934 IPR000084
PE-PPE PE-PPE domain PF08237 IPR013228
Pea-VEAacid Pea-VEAacid family PF08111 IPR012593
PEARLI-4 Arabidopsis phospholipase-like protein (PEARLI 4) PF05278 IPR007942
Pecanex_C Pecanex protein (C-terminus) PF05041 IPR007735
Pectate_lyase Pectate lyase PF03211 IPR004898
Pectate_lyase_2 Periplasmic pectate lyase PF06917 IPR010702
Pectinesterase Pectinesterase PF01095 IPR000070
Pec_lyase Pectic acid lyase (pec_lyase) PF09492 IPR012669
Pec_lyase_C Pectate lyase PF00544 IPR002022
Pec_lyase_N Pectate lyase, N terminus PF04431 IPR007524
Pedibin Pedibin/Hym-346 family PF08182 IPR012594
PEGA PEGA domain PF08308 IPR013229
PEGSRP Protein of unknown function (DUF1584) PF07623 IPR011477
Pellino Pellino PF04710 IPR006800
PemK PemK-like protein PF02452 IPR003477
PEMT Phospholipid methyltransferase PF04191 IPR007318
PEN-2 Presenilin enhancer-2 subunit of gamma secretase PF10251 IPR019379
Penaeidin Penaeidin PF05927 IPR009226
Pencillinase_R Penicillinase repressor PF03965 IPR005650
Penicil_amidase Penicillin amidase PF01804 IPR002692
Pentapeptide Pentapeptide repeats (8 copies) PF00805 IPR001646
Pentapeptide_2 Pentapeptide repeats (8 copies) PF01469 IPR002989
Pentaxin Pentaxin family PF00354 IPR001759
PEP-utilisers_N PEP-utilising enzyme, N-terminal PF05524 IPR008731
PEP-utilizers PEP-utilising enzyme, mobile domain PF00391 IPR008279
PEP-utilizers_C PEP-utilising enzyme, TIM barrel domain PF02896 IPR000121
Pep3_Vps18 Pep3/Vps18/deep orange family PF05131 IPR007810
PEPcase Phosphoenolpyruvate carboxylase PF00311 IPR021135
PEPCK Phosphoenolpyruvate carboxykinase PF00821 IPR008209
PEPCK_ATP Phosphoenolpyruvate carboxykinase PF01293 IPR001272
Pepsin-I3 Pepsin inhibitor-3-like repeated domain PF06394 IPR010480
PepSY Peptidase propeptide and YPEB domain PF03413 IPR005075
PepSY_TM PepSY-associated TM helix PF03929 IPR005625
Peptidase_A17 Pao retrotransposon peptidase PF05380 IPR008042
Peptidase_A21 Peptidase family A21 PF03566 IPR005313
Peptidase_A22B Signal peptide peptidase PF04258 IPR007369
Peptidase_A24 Type IV leader peptidase family PF01478 IPR000045
Peptidase_A25 Germination protease PF03418 IPR005080
Peptidase_A3 Cauliflower mosaic virus peptidase (A3) PF02160
Peptidase_A4 Peptidase A4 family PF01828
Peptidase_A6 Peptidase A6 family PF01829 IPR000696
Peptidase_A8 Signal peptidase (SPase) II PF01252 IPR001872
Peptidase_C1 Papain family cysteine protease PF00112 IPR000668
Peptidase_C10 Peptidase C10 family PF01640 IPR000200
Peptidase_C11 Clostripain family PF03415 IPR005077
Peptidase_C12 Ubiquitin carboxyl-terminal hydrolase, family 1 PF01088 IPR001578
Peptidase_C13 Peptidase C13 family PF01650 IPR001096
Peptidase_C14 Caspase domain PF00656 IPR011600
Peptidase_C15 Pyroglutamyl peptidase PF01470 IPR000816
Peptidase_C16 Peptidase C16 family PF01831 IPR002705
Peptidase_C1_2 Peptidase C1-like family PF03051 IPR004134
Peptidase_C2 Calpain family cysteine protease PF00648 IPR001300
Peptidase_C21 Tymovirus endopeptidase PF05381 IPR008043
Peptidase_C23 Carlavirus endopeptidase PF05379 IPR008041
Peptidase_C24 2C endopeptidase (C24) cysteine protease family PF03510 IPR000317
Peptidase_C25 Peptidase family C25 PF01364 IPR001769
Peptidase_C25_C Peptidase family C25, C terminal ig-like domain PF03785 IPR005536
Peptidase_C26 Peptidase C26 PF07722 IPR011697
Peptidase_C27 Rubella virus endopeptidase PF05407 IPR008738
Peptidase_C28 Foot-and-mouth virus L-proteinase PF05408 IPR008739
Peptidase_C3 3C cysteine protease (picornain 3C) PF00548 IPR000199
Peptidase_C30 Coronavirus endopeptidase C30 PF05409 IPR008740
Peptidase_C31 Porcine arterivirus-type cysteine proteinase alpha PF05410 IPR008741
Peptidase_C32 Equine arteritis virus putative proteinase PF05411 IPR008742
Peptidase_C33 Equine arterivirus Nsp2-type cysteine proteinase PF05412 IPR008743
Peptidase_C34 Putative closterovirus papain-like endopeptidase PF05413 IPR008744
Peptidase_C36 Beet necrotic yellow vein furovirus-type papain-like endopeptidase PF05415 IPR008746
Peptidase_C37 Southampton virus-type processing peptidase PF05416 IPR001665
Peptidase_C39 Peptidase C39 family PF03412 IPR005074
Peptidase_C4 Peptidase family C4 PF00863 IPR001730
Peptidase_C41 Hepatitis E cysteine protease PF05417 IPR008748
Peptidase_C42 Beet yellows virus-type papain-like endopeptidase C42 PF05533 IPR008749
Peptidase_C47 Staphopain peptidase C47 PF05543 IPR008750
Peptidase_C48 Ulp1 protease family, C-terminal catalytic domain PF02902 IPR003653
Peptidase_C5 Adenovirus endoprotease PF00770 IPR000855
Peptidase_C50 Peptidase family C50 PF03568 IPR005314
Peptidase_C53 Pestivirus Npro endopeptidase C53 PF05550 IPR008751
Peptidase_C54 Peptidase family C54 PF03416 IPR005078
Peptidase_C57 Vaccinia virus I7 processing peptidase PF03290 IPR004970
Peptidase_C58 Yersinia/Haemophilus virulence surface antigen PF03543
Peptidase_C6 Helper component proteinase PF00851 IPR001456
Peptidase_C65 Peptidase C65 Otubain PF10275 IPR019400
Peptidase_C69 Peptidase family C69 PF03577 IPR005322
Peptidase_C7 Peptidase C7 family PF01830 IPR002704
Peptidase_C78 Peptidase family C78 PF07910 IPR012462
Peptidase_C8 Peptidase family C8 PF03569 IPR005315
Peptidase_C9 Peptidase family C9 PF01707 IPR002620
Peptidase_M1 Peptidase family M1 PF01433 IPR014782
Peptidase_M10 Matrixin PF00413 IPR001818
Peptidase_M10_C Peptidase M10 serralysin C terminal PF08548 IPR013858
Peptidase_M11 Gametolysin peptidase M11 PF05548 IPR008752
Peptidase_M13 Peptidase family M13 PF01431 IPR018497
Peptidase_M13_N Peptidase family M13 PF05649 IPR008753
Peptidase_M14 Zinc carboxypeptidase PF00246 IPR000834
Peptidase_M15 D-ala-D-ala dipeptidase PF01427 IPR000755
Peptidase_M15_2 Bacterial protein of unknown function (DUF882) PF05951 IPR010275
Peptidase_M15_3 Peptidase M15 PF08291 IPR013230
Peptidase_M16 Insulinase (Peptidase family M16) PF00675 IPR011765
Peptidase_M16_C Peptidase M16 inactive domain PF05193 IPR007863
Peptidase_M17 Cytosol aminopeptidase family, catalytic domain PF00883 IPR000819
Peptidase_M17_N Cytosol aminopeptidase family, N-terminal domain PF02789 IPR008283
Peptidase_M18 Aminopeptidase I zinc metalloprotease (M18) PF02127 IPR001948
Peptidase_M19 Membrane dipeptidase (Peptidase family M19) PF01244 IPR008257
Peptidase_M2 Angiotensin-converting enzyme PF01401 IPR001548
Peptidase_M20 Peptidase family M20/M25/M40 PF01546 IPR002933
Peptidase_M22 Glycoprotease family PF00814 IPR000905
Peptidase_M23 Peptidase family M23 PF01551 IPR016047
Peptidase_M24 metallopeptidase family M24 PF00557 IPR000994
Peptidase_M26_C M26 IgA1-specific Metallo-endopeptidase C-terminal region PF07580 IPR011505
Peptidase_M26_N M26 IgA1-specific Metallo-endopeptidase N-terminal region PF05342 IPR008006
Peptidase_M27 Clostridial neurotoxin zinc protease PF01742 IPR000395
Peptidase_M28 Peptidase family M28 PF04389 IPR007484
Peptidase_M29 Thermophilic metalloprotease (M29) PF02073 IPR000787
Peptidase_M3 Peptidase family M3 PF01432 IPR001567
Peptidase_M30 Peptidase M30 PF10460 IPR019501
Peptidase_M32 Carboxypeptidase Taq (M32) metallopeptidase PF02074 IPR001333
Peptidase_M35 Deuterolysin metalloprotease (M35) family PF02102 IPR001384
Peptidase_M36 Fungalysin metallopeptidase (M36) PF02128 IPR001842
Peptidase_M3_N Oligopeptidase F PF08439 IPR013647
Peptidase_M4 Thermolysin metallopeptidase, catalytic domain PF01447 IPR013856
Peptidase_M41 Peptidase family M41 PF01434 IPR000642
Peptidase_M42 M42 glutamyl aminopeptidase PF05343 IPR008007
Peptidase_M43 Pregnancy-associated plasma protein-A PF05572 IPR008754
Peptidase_M44 Protein G1 PF03410 IPR005072
Peptidase_M48 Peptidase family M48 PF01435 IPR001915
Peptidase_M49 Peptidase family M49 PF03571 IPR005317
Peptidase_M4_C Thermolysin metallopeptidase, alpha-helical domain PF02868 IPR001570
Peptidase_M50 Peptidase family M50 PF02163 IPR008915
Peptidase_M54 Peptidase family M54 PF07998 IPR012962
Peptidase_M55 D-aminopeptidase PF04951 IPR007035
Peptidase_M56 BlaR1 peptidase M56 PF05569 IPR008756
Peptidase_M6 Immune inhibitor A peptidase M6 PF05547 IPR008757
Peptidase_M61 M61 glycyl aminopeptidase PF05299 IPR007963
Peptidase_M64 IgA Peptidase M64 PF09471 IPR019026
Peptidase_M66 Peptidase M66 PF10462 IPR019503
Peptidase_M7 Streptomyces extracellular neutral proteinase (M7) family PF02031 IPR000013
Peptidase_M74 Penicillin-insensitive murein endopeptidase PF03411 IPR005073
Peptidase_M75 Imelysin PF09375 IPR018976
Peptidase_M76 Peptidase M76 family PF09768 IPR019165
Peptidase_M8 Leishmanolysin PF01457 IPR001577
Peptidase_M9 Collagenase PF01752 IPR013510
Peptidase_M9_N Peptidase family M9 N-terminal PF08453 IPR013661
Peptidase_S10 Serine carboxypeptidase PF00450 IPR001563
Peptidase_S11 D-alanyl-D-alanine carboxypeptidase PF00768 IPR001967
Peptidase_S13 D-Ala-D-Ala carboxypeptidase 3 (S13) family PF02113 IPR000667
Peptidase_S15 X-Pro dipeptidyl-peptidase (S15 family) PF02129
Peptidase_S21 Assemblin (Peptidase family S21) PF00716 IPR001847
Peptidase_S24 Peptidase S24-like PF00717 IPR019759
Peptidase_S26 Peptidase S26 PF10502 IPR019533
Peptidase_S28 Serine carboxypeptidase S28 PF05577 IPR008758
Peptidase_S29 Hepatitis C virus NS3 protease PF02907 IPR004109
Peptidase_S3 Alphavirus core protein PF00944 IPR000930
Peptidase_S30 Potyvirus P1 protease PF01577 IPR002540
Peptidase_S31 Pestivirus NS3 polyprotein peptidase S31 PF05578 IPR000280
Peptidase_S32 Equine arteritis virus serine endopeptidase S32 PF05579 IPR008760
Peptidase_S37 PS-10 peptidase S37 PF05576 IPR008761
Peptidase_S39 Peptidase S39 PF02122 IPR000382
Peptidase_S41 Peptidase family S41 PF03572 IPR005151
Peptidase_S46 Peptidase S46 PF10459 IPR019500
Peptidase_S48 Peptidase family S48 PF03574 IPR005319
Peptidase_S49 Peptidase family S49 PF01343 IPR002142
Peptidase_S49_N Peptidase family S49 N-terminal PF08496 IPR013703
Peptidase_S51 Peptidase family S51 PF03575 IPR005320
Peptidase_S55 SpoIVB peptidase S55 PF05580 IPR008763
Peptidase_S58 Peptidase family S58 PF03576 IPR005321
Peptidase_S6 Immunoglobulin A1 protease PF02395 IPR000710
Peptidase_S64 Peptidase family S64 PF08192
Peptidase_S66 LD-carboxypeptidase PF02016 IPR003507
Peptidase_S68 Peptidase S68 PF10461 IPR019502
Peptidase_S7 Peptidase S7, Flavivirus NS3 serine protease PF00949 IPR001850
Peptidase_S8 Subtilase family PF00082 IPR000209
Peptidase_S9 Prolyl oligopeptidase family PF00326 IPR001375
Peptidase_S9_N Prolyl oligopeptidase, N-terminal beta-propeller domain PF02897 IPR004106
Peptidase_U32 Peptidase family U32 PF01136 IPR001539
Peptidase_U35 Caudovirus prohead protease PF04586 IPR006433
Peptidase_U4 Sporulation factor SpoIIGA PF03419 IPR005081
Peptidase_U40 Peptidase U40 PF10464 IPR019505
Peptidase_U49 Peptidase U49 PF10463 IPR019504
Peptidase_U57 YabG peptidase U57 PF05582 IPR008764
Peptidase_U9 Prohead core protein protease PF03420 IPR005082
Pept_tRNA_hydro Peptidyl-tRNA hydrolase PF01195 IPR001328
PepX_C X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain PF08530 IPR013736
PepX_N X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal PF09168 IPR015251
Pep_deformylase Polypeptide deformylase PF01327 IPR000181
Pep_M12B_propep Reprolysin family propeptide PF01562 IPR002870
Per1 Per1-like PF04080 IPR007217
PerB PerB protein PF06590 IPR009513
PerC PerC transcriptional activator PF06069
Pericardin_rpt Pericardin like repeat PF07054 IPR009765
Perilipin Perilipin family PF03036 IPR004279
Peripla_BP_1 Periplasmic binding proteins and sugar binding domain of the LacI family PF00532 IPR001761
Peripla_BP_2 Periplasmic binding protein PF01497 IPR002491
Periviscerokin Periviscerokinin family PF08259 IPR013231
peroxidase Peroxidase PF00141 IPR002016
Peroxidase_2 Peroxidase, family 2 PF01328 IPR000028
Peroxin-13_N Peroxin 13, N-terminal PF04088 IPR007223
Peroxin-3 Peroxin-3 PF04882 IPR006966
Pertactin Pertactin PF03212 IPR004899
Pertus-S4-tox Pertussis toxin S4 subunit PF09275 IPR015355
Pertus-S5-tox Pertussis toxin S5 subunit PF09276 IPR015356
Pertussis_S1 Pertussis toxin, subunit 1 PF02917 IPR003898
Pertussis_S2S3 Pertussis toxin, subunit 2 and 3, C-terminal domain PF02918 IPR020063
Pes-10 Pes-10 PF07149 IPR009819
Pescadillo_N Pescadillo N-terminus PF06732 IPR010613
PET PET Domain PF06297 IPR010442
PET122 PET122 PF05476 IPR008732
Pet127 Mitochondrial protein Pet127 PF08634 IPR013943
Pet191_N Cytochrome c oxidase assembly protein PET191 PF10203 IPR018793
Pet20 Mitochondrial protein Pet20 PF08692 IPR014804
PetG Cytochrome B6-F complex subunit 5 PF02529 IPR003683
PetL Cytochrome B6-F complex subunit VI (PetL) PF05115 IPR007802
PetM PetM family of cytochrome b6f complex subunit 7 PF08041 IPR012595
PetN PetN PF03742 IPR005497
PEX-1N Peroxisome biogenesis factor 1, N-terminal PF09262 IPR015342
PEX-2N Peroxisome biogenesis factor 1, N-terminal PF09263 IPR015343
PEX11 Peroxisomal biogenesis factor 11 (PEX11) PF05648
Pex14_N Peroxisomal membrane anchor protein (Pex14p) conserved region PF04695 IPR006785
Pex16 Peroxisomal membrane protein (Pex16) PF08610 IPR013919
Pex19 Pex19 protein family PF04614 IPR006708
Pex24p Integral peroxisomal membrane peroxin PF06398 IPR010482
Pex26 Pex26 protein PF07163 IPR010797
Pex2_Pex12 Pex2 / Pex12 amino terminal region PF04757 IPR006845
PFEMP PFEMP DBL domain PF03011 IPR004258
Pfg27 Pfg27 PF09216 IPR015299
PFK Phosphofructokinase PF00365 IPR000023
PfkB pfkB family carbohydrate kinase PF00294 IPR011611
PFL Pyruvate formate lyase PF02901 IPR004184
PFU PFU (PLAA family ubiquitin binding) PF09070 IPR015155
Pga1 GPI-Mannosyltransferase II co-activator PF10333 IPR019433
PGA2 Protein trafficking PGA2 PF07543 IPR011431
PGAM Phosphoglycerate mutase family PF00300 IPR013078
PGAMP Planctomycete PGAMP PF07644 IPR011503
PGAP1 PGAP1-like protein PF07819 IPR012908
PGA_cap Bacterial capsule synthesis protein PGA_cap PF09587 IPR019079
PGI Phosphoglucose isomerase PF00342 IPR001672
PGK Phosphoglycerate kinase PF00162 IPR001576
PglZ PglZ domain PF08665 IPR013973
PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PF02878 IPR005844
PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PF02879 IPR005845
PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PF02880 IPR005846
PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain PF00408 IPR005843
PgpA Phosphatidylglycerophosphatase A PF04608 IPR007686
PGPGW Putative transmembrane protein (PGPGW) PF09656 IPR019099
PG_binding_1 Putative peptidoglycan binding domain PF01471 IPR002477
PG_binding_2 Putative peptidoglycan binding domain PF08823 IPR014927
PG_binding_3 Predicted Peptidoglycan domain PF09374 IPR018537
PH PH domain PF00169 IPR001849
Ph1570 Ph1570 protein PF09638 IPR018596
PhaC_N Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PF07167 IPR010941
Phage-A118_gp45 Protein gp45 of Bacteriophage A118 PF10653 IPR018915
Phage-Gp8 Bacteriophage T4, Gp8 PF09215 IPR015298
Phage-MuB_C Mu B transposition protein, C terminal PF09077 IPR009084
Phage-scaffold Bacteriophage, scaffolding protein PF09306 IPR015385
Phage-tail_1 Baseplate structural protein, domain 1 PF09097 IPR015181
Phage-tail_2 Baseplate structural protein, domain 2 PF09096 IPR015180
PhageMaj_Tail Phage major tail protein, TP901-1 PF10132
PhageMin_Tail Phage-related minor tail protein PF10145 IPR010090
PhageP22-tail Salmonella phage P22 tailspike PF09251 IPR015331
Phageshock_PspD Phage shock protein PspD (Phageshock_PspD) PF09584 IPR014321
Phageshock_PspG Phage shock protein G (Phageshock_PspG) PF09583 IPR014318
Phage_1_1 Bacteriophage 1.1 Protein PF08200 IPR013232
Phage_30_3 Bacteriophage protein GP30.3 PF08010 IPR012596
Phage_30_8 Phage GP30.8 protein PF06019 IPR009258
Phage_AlpA Prophage CP4-57 regulatory protein (AlpA) PF05930 IPR010260
Phage_antitermQ Phage antitermination protein Q PF06530 IPR010534
Phage_antiter_Q Phage antitermination protein Q PF06323 IPR010455
Phage_ASH Ash protein family PF10554 IPR018880
Phage_attach Phage Head-Tail Attachment PF05354 IPR008018
Phage_B Scaffold protein B PF02304 IPR003513
Phage_base_V Phage-related baseplate assembly protein PF04717 IPR006531
Phage_BR0599 Phage conserved hypothetical protein BR0599 PF09356 IPR018964
Phage_capsid Phage capsid family PF05065
Phage_Capsid_P3 P3 major capsid protein PF09018 IPR015108
Phage_cap_E Phage major capsid protein E PF03864 IPR005564
Phage_cap_P2 Phage major capsid protein, P2 family PF05125 IPR006441
Phage_CII Bacteriophage CII protein PF05269 IPR007933
Phage_CI_repr Bacteriophage CI repressor helix-turn-helix domain PF07022 IPR010744
Phage_coat Phage PP7 coat protein PF09063 IPR015148
Phage_Coat_A Phage Coat Protein A PF05357 IPR008021
Phage_Coat_B Phage Coat protein B PF05356 IPR008020
Phage_Coat_Gp8 Phage major coat protein, Gp8 PF05371 IPR008033
Phage_connector Phage Connector (GP10) PF05352 IPR008016
Phage_Cox Regulatory phage protein cox PF10743 IPR019679
Phage_CP76 Phage regulatory protein CII (CP76) PF06892 IPR009679
Phage_CRI Phage replication protein CRI PF05144 IPR022686
Phage_DNA_bind Helix-destabilising protein PF02303 IPR003512
Phage_E Phage tail protein E PF06158 IPR009322
Phage_endo_I Phage endonuclease I PF05367 IPR008029
Phage_F Capsid protein (F protein) PF02305 IPR003514
Phage_fiber Phage tail fibre repeat PF03335 IPR005003
Phage_fiber_2 Phage tail fibre repeat PF03406 IPR005068
Phage_fiber_C Putative prophage tail fibre C-terminus PF06820 IPR009640
Phage_FRD3 Bacteriophage FRD3 protein PF05798 IPR008765
Phage_G Major spike protein (G protein) PF02306 IPR003515
Phage_Gp111 Streptococcus thermophilus bacteriophage Gp111 protein PF07410 IPR010878
Phage_Gp14 Phage protein Gp14 PF10666 IPR018923
Phage_Gp15 Bacteriophage Gp15 protein PF06854 IPR009660
Phage_Gp19 Phage protein Gp19/Gp15/Gp42 PF09355 IPR018963
Phage_GP20 Phage minor structural protein GP20 PF06810 IPR009636
Phage_Gp23 Protein gp23 (Bacteriophage A118) PF10669 IPR018926
Phage_Gp9 Phage protein Gp9 PF10665 IPR019612
Phage_GPA Bacteriophage replication gene A protein (GPA) PF05840 IPR008766
Phage_GPD Phage late control gene D protein (GPD) PF05954 IPR010277
Phage_GPL Phage head completion protein (GPL) PF05926 IPR009225
Phage_GPO Phage capsid scaffolding protein (GPO) PF05929 IPR009228
Phage_HK97_TLTM Tail length tape measure protein PF06120 IPR009302
Phage_holin Phage lysis protein, holin PF04688 IPR006479
Phage_holin_1 Bacteriophage holin PF04531 IPR006485
Phage_holin_2 Phage holin family 2 PF04550 IPR007633
Phage_holin_3 Phage holin family (Lysis protein S) PF05106 IPR006481
Phage_holin_4 Holin family PF05105 IPR006480
Phage_holin_5 Phage holin PF06946 IPR009708
Phage_holin_6 Phage holin family 6 PF10746 IPR019682
Phage_H_T_join Phage head-tail joining protein PF05521 IPR008767
Phage_integrase Phage integrase family PF00589 IPR002104
Phage_integr_N Phage integrase, N-terminal SAM-like domain PF02899 IPR004107
Phage_integ_N Bacteriophage lambda integrase, N-terminal domain PF09003 IPR015094
Phage_Lacto_M3 Lactococcus phage M3 protein PF07066 IPR009773
Phage_lambda_P Replication protein P PF06992 IPR009731
Phage_lambd_GpG Bacteriophage lambda minor tail protein (GpG) PF06894 IPR010027
Phage_lysis Bacteriophage lysis protein PF03245 IPR004929
Phage_lysozyme Phage lysozyme PF00959 IPR002196
Phage_mat-A Phage maturation protein PF03863 IPR005563
Phage_min_cap Phage minor capsid protein PF05126
Phage_min_cap2 Phage minor capsid protein 2 PF06152 IPR009319
Phage_min_tail Phage minor tail protein PF05939 IPR010265
Phage_Mu_F Phage Mu protein F like protein PF04233 IPR006528
Phage_Mu_Gam Bacteriophage Mu Gam like protein PF07352 IPR009951
Phage_Mu_Gp45 Bacteriophage Mu Gp45 protein PF06890 IPR010688
Phage_Mu_P Bacteriophage Mu P protein PF06893
Phage_NinH Phage NinH protein PF06322 IPR010454
Phage_Nu1 Phage DNA packaging protein Nu1 PF07471 IPR010906
Phage_Orf51 Phage Conserved Open Reading Frame 51 PF06194 IPR009338
Phage_P2_GpE Phage P2 GpE PF06528 IPR009493
Phage_P2_GpU Phage P2 GpU PF06995 IPR009734
Phage_portal Phage portal protein PF04860 IPR006944
Phage_portal_2 Phage portal protein, lambda family PF05136 IPR006429
Phage_pRha Phage regulatory protein Rha (Phage_pRha) PF09669 IPR019104
Phage_prot_Gp6 Phage portal protein, SPP1 Gp6-like PF05133 IPR021145
Phage_QLRG Phage QLRG family, putative DNA packaging PF05135 IPR021146
Phage_rep_O Bacteriophage replication protein O PF04492 IPR006497
Phage_rep_org_N N-terminal phage replisome organiser (Phage_rep_org_N) PF09681 IPR010056
Phage_RpbA Phage RNA polymerase binding, RpbA PF10789 IPR019725
Phage_sheath_1 Phage tail sheath protein PF04984 IPR007067
Phage_T4_gp19 T4-like virus tail tube protein gp19 PF06841 IPR010667
Phage_T4_Gp20 Bacteriophage T4-like capsid assembly protein (Gp20) PF07230 IPR010823
Phage_T4_Gp30_7 Phage Gp30.7 protein PF06919 IPR009690
Phage_T4_gp36 Phage T4 tail fibre PF03903 IPR005601
Phage_T4_Ndd T4-like phage nuclear disruption protein (Ndd) PF06591 IPR009514
Phage_T7_Capsid Phage T7 capsid assembly protein PF05396 IPR008768
Phage_T7_tail Phage T7 tail fibre protein PF03906 IPR005604
Phage_TAC Phage tail assembly chaperone PF06222 IPR010411
Phage_tail Phage major tail protein PF04630 IPR006724
Phage_tail_2 Phage major tail protein 2 PF06199 IPR011855
Phage_tail_3 Phage tail protein PF08813 IPR014918
Phage_tail_L Phage minor tail protein L PF05100 IPR006487
phage_tail_N Prophage tail fibre N-terminal PF08400 IPR013609
Phage_tail_S Phage virion morphogenesis family PF05069
Phage_tail_T Minor tail protein T PF06223 IPR009350
Phage_tail_U Phage minor tail protein U PF06141 IPR009312
Phage_tail_X Phage Tail Protein X PF05489 IPR008861
Phage_terminase Phage terminase small subunit PF10668 IPR018925
Phage_term_sma Putative bacteriophage terminase small subunit PF07141 IPR010789
Phage_term_smal Phage small terminase subunit PF05944 IPR010270
Phage_Treg Lactococcus bacteriophage putative transcription regulator PF04761 IPR006848
Phage_tube Phage tail tube protein FII PF04985 IPR006498
Phage_X Phage X family PF05155 IPR022688
Phage_XkdX Phage uncharacterised protein (Phage_XkdX) PF09693 IPR010022
PhaG_MnhG_YufB Na+/H+ antiporter subunit PF03334 IPR005133
PhaP_Bmeg Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) PF09602 IPR011728
Phasin Poly(hydroxyalcanoate) granule associated protein (phasin) PF05597 IPR008769
Phasin_2 Phasin protein PF09361 IPR018968
PHAT PHAT PF09246 IPR015327
PHA_gran_rgn Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) PF09650
PHA_synth_III_E Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) PF09712
PHB_acc PHB accumulation regulatory domain PF05233 IPR007897
PHB_acc_N PHB/PHA accumulation regulator DNA-binding domain PF07879 IPR012909
PHB_depo_C PHB de-polymerase C-terminus PF06850 IPR009656
PHD PHD-finger PF00628 IPR019787
PhdYeFM Phd_YefM PF02604 IPR006442
Phenol_Hydrox Methane/Phenol/Toluene Hydroxylase PF02332 IPR003430
Phenol_hyd_sub Phenol hydroxylase subunit PF06099 IPR010353
Phenol_monoox Phenol hydroxylase conserved region PF04663 IPR006756
Phenyl_P_gamma Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) PF09662 IPR014097
Pheromone Fungal mating-type pheromone PF08015 IPR012597
Phe_hydrox_dim Phenol hydroxylase, C-terminal dimerisation domain PF07976 IPR012941
Phe_tRNA-synt_N Aminoacyl tRNA synthetase class II, N-terminal domain PF02912 IPR004188
Phe_ZIP Phenylalanine zipper PF08916 IPR015012
PHF5 PHF5-like protein PF03660 IPR005345
Phge_rel_HI1409 Phage-related protein (Phge_rel_HI1409) PF09714
Phg_2220_C Conserved phage C-terminus (Phg_2220_C) PF09524 IPR011741
Phi-29_GP16_7 Bacteriophage phi-29 early protein GP16.7 PF06720 IPR009595
Phi-29_GP3 Phi-29 DNA terminal protein GP3 PF05435 IPR008770
Phi-29_GP4 Phi-29-like late genes activator (early protein GP4) PF05464 IPR008771
Phi_1 Phosphate-induced protein 1 conserved region PF04674 IPR006766
PHK_AB Phosphorylase kinase alpha/beta PF05682
Phlebovirus_G1 Phlebovirus glycoprotein G1 PF07243 IPR010826
Phlebovirus_G2 Phlebovirus glycoprotein G2 PF07245 IPR009878
Phlebovirus_N Phlebovirus nucleocapsid (N) protein PF06606
Phlebovirus_NSM Phlebovirus nonstructural protein NS-M PF07246 IPR009879
PhnA PhnA protein PF03831 IPR013988
PhnA_Zn_Ribbon PhnA Zinc-Ribbon PF08274 IPR013987
PhnG Phosphonate metabolism protein PhnG PF06754 IPR009609
PhnH Bacterial phosphonate metabolism protein (PhnH) PF05845 IPR008772
PhnI Bacterial phosphonate metabolism protein (PhnI) PF05861 IPR008773
PhnJ Phosphonate metabolism protein PhnJ PF06007 IPR010306
PHO4 Phosphate transporter family PF01384 IPR001204
Pho88 Phosphate transporter (Pho88) PF10032 IPR019263
PhoD PhoD-like phosphatase PF09423 IPR018946
PhoH PhoH-like protein PF02562 IPR003714
PhoPQ_related PhoPQ-activated pathogenicity-related protein PF10142 IPR009199
PhoQ_Sensor PhoQ Sensor PF08918 IPR015014
Phosducin Phosducin PF02114
PhosphMutase 2,3-bisphosphoglycerate-independent phosphoglycerate mutase PF10143 IPR019304
Phosphodiest Type I phosphodiesterase / nucleotide pyrophosphatase PF01663 IPR002591
Phosphoesterase Phosphoesterase family PF04185 IPR007312
Phospholamban Phospholamban PF04272 IPR005984
Phospholip_A2_1 Phospholipase A2 PF00068 IPR001211
Phospholip_A2_2 Phospholipase A2 PF05826 IPR008774
Phospholip_A2_3 Prokaryotic phospholipase A2 PF09056 IPR015141
Phospholip_B Phospholipase B PF04916 IPR007000
Phosphoprotein Vesiculovirus phosphoprotein PF00922 IPR000224
Phosphorylase Carbohydrate phosphorylase PF00343 IPR000811
Phospho_p8 DNA-binding nuclear phosphoprotein p8 PF10195 IPR018792
Phos_pyr_kin Phosphomethylpyrimidine kinase PF08543 IPR013749
Photo_RC Photosynthetic reaction centre protein PF00124 IPR000484
PhoU PhoU domain PF01895 IPR008170
PhoU_div Protein of unknown function DUF47 PF01865 IPR018445
PHP PHP domain PF02811 IPR004013
PHR PHR domain PF08005 IPR012983
Phycobilisome Phycobilisome protein PF00502 IPR012128
Phycoerythr_ab Phycoerythrin, alpha/beta chain PF02972 IPR004228
PhyH Phytanoyl-CoA dioxygenase (PhyH) PF05721 IPR008775
Phytase Phytase PF02333 IPR003431
Phytochelatin Phytochelatin synthase PF05023 IPR007719
Phytochelatin_C Domain of unknown function (DUF1984) PF09328 IPR015407
Phytochrome Phytochrome region PF00360 IPR013515
Phytoreo_P8 Phytoreovirus outer capsid protein P8 PF07124 IPR009807
Phytoreo_Pns Phytoreovirus nonstructural protein Pns10/11 PF05451 IPR008777
Phytoreo_S7 Phytoreovirus S7 protein PF07236 IPR009873
Phyto_Pns9_10 Phytoreovirus nonstructural protein Pns9/Pns10 PF05878 IPR008776
PHZA_PHZB Phenazine biosynthesis protein A/B PF03284 IPR004964
PhzC-PhzF Phenazine biosynthesis-like protein PF02567 IPR003719
PH_2 Plant pleckstrin homology-like region PF08458 IPR013666
PI-PLC-X Phosphatidylinositol-specific phospholipase C, X domain PF00388 IPR000909
PI-PLC-Y Phosphatidylinositol-specific phospholipase C, Y domain PF00387 IPR001711
PI31_Prot_Reg PI31 proteasome regulator PF08577 IPR013886
PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain) PF00613 IPR001263
PI3K_1B_p101 Phosphoinositide 3-kinase gamma adapter protein p101 subunit PF10486 IPR019522
PI3K_C2 Phosphoinositide 3-kinase C2 PF00792 IPR002420
PI3K_p85B PI3-kinase family, p85-binding domain PF02192 IPR003113
PI3K_rbd PI3-kinase family, ras-binding domain PF00794 IPR000341
PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase PF00454 IPR000403
Picorna_P3A Picornaviridae P3A protein PF06363 IPR009419
Pico_P1A Picornavirus coat protein (VP4) PF02226 IPR003138
Pico_P2A Picornavirus core protein 2A PF00947 IPR000081
Pico_P2B Picornavirus 2B protein PF01552 IPR002527
PID Phosphotyrosine interaction domain (PTB/PID) PF00640 IPR006020
PIG-F GPI biosynthesis protein family Pig-F PF06699 IPR009580
PIG-H GPI-GlcNAc transferase complex, PIG-H component PF10181 IPR019328
PIG-L GlcNAc-PI de-N-acetylase PF02585 IPR003737
PIG-P PIG-P PF08510 IPR013717
PIG-S Phosphatidylinositol-glycan biosynthesis class S protein PF10510 IPR019540
PIG-U GPI transamidase subunit PIG-U PF06728 IPR009600
PIG-X PIG-X / PBN1 PF08320
PIGA PIGA (GPI anchor biosynthesis) PF08288 IPR013234
Pigment_DH Pigment-dispersing hormone (PDH) PF06324 IPR009396
PigN Phosphatidylinositolglycan class N (PIG-N) PF04987 IPR017852
PIH1 pre-RNA processing PIH1/Nop17 PF08190
PilI Plasmid conjugative transfer protein PilI PF10623 IPR018897
Pilin Pilin (bacterial filament) PF00114 IPR001082
Pili_assembly_C Gram-negative pili assembly chaperone, C-terminal domain PF02753 IPR016148
Pili_assembly_N Gram-negative pili assembly chaperone, N-terminal domain PF00345 IPR016147
PilM PilM PF07419 IPR009987
PilN Fimbrial assembly protein (PilN) PF05137 IPR007813
PilO Pilus assembly protein, PilO PF04350
PilP Pilus assembly protein, PilP PF04351 IPR007446
PilS PilS N terminal PF08805 IPR014911
Pilus_CpaD Pilus biogenesis CpaD protein (pilus_cpaD) PF09476 IPR019027
PilZ PilZ domain PF07238 IPR009875
PIN PIN domain PF01850 IPR002716
Pinin_SDK_memA pinin/SDK/memA/ protein conserved region PF04696 IPR006786
Pinin_SDK_N pinin/SDK conserved region PF04697 IPR006787
PIN_2 Predicted nucleotide-binding protein, containing PIN domain PF10130 IPR019298
PIP5K Phosphatidylinositol-4-phosphate 5-Kinase PF01504 IPR002498
PipA PipA protein PF07108 IPR010777
PIR Yeast PIR protein repeat PF00399 IPR000420
Pirin Pirin PF02678 IPR003829
Pirin_C Pirin C-terminal cupin domain PF05726 IPR008778
Piwi Piwi domain PF02171 IPR003165
PK Pyruvate kinase, barrel domain PF00224 IPR015793
PKD PKD domain PF00801 IPR000601
PKD_channel Polycystin cation channel PF08016 IPR013122
PKI cAMP-dependent protein kinase inhibitor PF02827 IPR004171
pKID pKID domain PF02173 IPR003102
Pkinase Protein kinase domain PF00069 IPR017442
Pkinase_C Protein kinase C terminal domain PF00433 IPR017892
Pkinase_Tyr Protein tyrosine kinase PF07714 IPR001245
Pkip-1 Pkip-1 protein PF06878 IPR009672
Pkr1 ER protein Pkr1 PF08636 IPR013945
PK_C Pyruvate kinase, alpha/beta domain PF02887 IPR015794
PLA1 Phospholipase A1 PF02253 IPR003187
PLA2G12 Group XII secretory phospholipase A2 precursor (PLA2G12) PF06951 IPR010711
PLA2_B Lysophospholipase catalytic domain PF01735 IPR002642
PLA2_inh Phospholipase A2 inhibitor PF02988 IPR004126
PLAC PLAC (protease and lacunin) domain PF08686 IPR010909
PLAC8 PLAC8 family PF04749 IPR006461
Planc_extracel Planctomycete extracellular PF07595 IPR011506
Plant_all_beta Plant specific N-all beta domain PF10532 IPR018290
Plant_NMP1 Plant nuclear matrix protein 1 (NMP1) PF06694 IPR010604
Plant_tran Plant transposon protein PF04827 IPR006912
Plant_vir_prot Plant viral movement protein PF01307 IPR001896
Plant_zn_clust Plant zinc cluster domain PF10533 IPR018872
Plasmid_killer Plasmid maintenance system killer protein PF05015 IPR007711
Plasmid_parti Putative plasmid partition protein PF01672 IPR002596
Plasmid_RAQPRD Plasmid protein of unknown function (Plasmid_RAQPRD) PF09686 IPR019110
Plasmid_stabil Plasmid stabilisation system protein PF05016 IPR007712
Plasmid_stab_B Plasmid stability protein PF10784 IPR019720
Plasmid_Txe Plasmid encoded toxin Txe PF06769 IPR009614
Plasmodium_HRP Plasmodium histidine-rich protein (HRPII/III) PF05403 IPR008779
Plasmodium_Vir Plasmodium vivax Vir protein PF05795 IPR008780
Plasmod_dom_1 Plasmodium protein of unknown function (Plasmod_dom_1) PF09715 IPR006410
Plasmod_MYXSPDY Plasmodium repeat_MYXSPDY PF07981 IPR012598
Plasmod_Pvs28 Plasmodium ookinete surface protein Pvs28 PF06247 IPR010423
PLAT PLAT/LH2 domain PF01477 IPR001024
PLATZ PLATZ transcription factor PF04640 IPR006734
PLC-beta_C PLC-beta C terminal PF08703 IPR014815
PLDc Phospholipase D Active site motif PF00614 IPR001736
PLD_envelope Phospholipase D/viral envelope PF08371 IPR013582
Plectin Plectin repeat PF00681 IPR001101
Plexin_cytopl Plexin cytoplasmic region PF08337 IPR013548
PLRV_ORF5 Potato leaf roll virus readthrough protein PF01690 IPR002929
PLU-1 PLU-1-like protein PF08429 IPR013637
Plug TonB-dependent Receptor Plug Domain PF07715 IPR012910
Plug_translocon Plug domain of Sec61p PF10559 IPR019561
Plus-3 Plus-3 domain PF03126 IPR004343
PmbA_TldD Putative modulator of DNA gyrase PF01523 IPR002510
PMBR Pseudomurein-binding repeat PF09373 IPR018975
PMC2NT PMC2NT (NUC016) domain PF08066 IPR012588
PMD Plant mobile domain PF10536 IPR019557
PMEI Plant invertase/pectin methylesterase inhibitor PF04043 IPR006501
PMG PMG protein PF05287 IPR007951
PMI_typeI Phosphomannose isomerase type I PF01238 IPR001250
PMM Eukaryotic phosphomannomutase PF03332 IPR005002
PMP1_2 ATPase proteolipid family PF08114 IPR012589
PMP22_Claudin PMP-22/EMP/MP20/Claudin family PF00822 IPR004031
Pmp24 Peroxisomal membrane protein 24 PF10499 IPR019531
PMSR Peptide methionine sulfoxide reductase PF01625 IPR002569
PMT Dolichyl-phosphate-mannose-protein mannosyltransferase PF02366 IPR003342
Pneumovirus_M2 Pneumovirus matrix protein 2 (M2) PF06436 IPR009452
Pneumo_att_G Pneumovirinae attachment membrane glycoprotein G PF05539 IPR008781
Pneumo_M2 Pneumovirus M2 protein PF07380 IPR009969
Pneumo_matrix Pneumovirus matrix protein PF03393 IPR005056
Pneumo_ncap Pneumovirus nucleocapsid protein PF03246 IPR004930
Pneumo_NS1 Pneumovirus NS1 protein PF03438 IPR005099
Pneumo_phosprot Pneumovirus phosphoprotein PF02478 IPR003487
PngaseF_C Peptide-N-glycosidase F, C terminal PF09113 IPR015197
PngaseF_N Peptide-N-glycosidase F, N terminal PF09112 IPR015196
PNK3P Polynucleotide kinase 3 phosphatase PF08645 IPR013954
PNPase Polyribonucleotide nucleotidyltransferase, RNA binding domain PF03726 IPR015848
PNPOx_C Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PF10590 IPR019576
PNP_UDP_1 Phosphorylase superfamily PF01048 IPR000845
PNTB NAD(P) transhydrogenase beta subunit PF02233 IPR004003
POC4 POC4 chaperone PF10450 IPR018855
Podoplanin Podoplanin PF05808 IPR008783
Podovirus_Gp16 Podovirus DNA encapsidation protein (Gp16) PF05894 IPR008784
PolC_DP2 DNA polymerase II large subunit DP2 PF03833 IPR016033
Pollen_allerg_1 Pollen allergen PF01357 IPR007117
Pollen_allerg_2 Ribonuclease (pollen allergen) PF01620 IPR002914
Pollen_Ole_e_I Pollen proteins Ole e I family PF01190 IPR006041
POLO_box POLO box duplicated region PF00659 IPR000959
PolyA_pol Poly A polymerase head domain PF01743 IPR002646
PolyG_pol Sigma NS protein PF01518 IPR002507
Polyhedrin Polyhedrin PF00738 IPR001746
Polyketide_cyc Polyketide cyclase / dehydrase and lipid transport PF03364 IPR005031
Polyketide_cyc2 Polyketide cyclase / dehydrase and lipid transport PF10604 IPR019587
Polyoma_agno Polyomavirus agnoprotein PF01736 IPR002643
Polyoma_coat Polyomavirus coat protein PF00718 IPR000662
Polyoma_coat2 Polyomavirus coat protein PF00761 IPR001070
Polyoma_lg_T_C Polyomavirus large T antigen C-terminus PF06431 IPR010932
polyprenyl_synt Polyprenyl synthetase PF00348 IPR000092
Polysacc_deac_1 Polysaccharide deacetylase PF01522 IPR002509
Polysacc_deac_2 Divergent polysaccharide deacetylase PF04748 IPR006837
Polysacc_synt Polysaccharide biosynthesis protein PF01943 IPR002797
Polysacc_synt_2 Polysaccharide biosynthesis protein PF02719 IPR003869
Polysacc_syn_2C Polysaccharide biosynthesis protein C-terminal PF08485 IPR013692
Poly_export Polysaccharide biosynthesis/export protein PF02563 IPR003715
Pol_alpha_B_N DNA polymerase alpha subunit B N-terminal PF08418 IPR013627
Pombe_5TM Pombe specific 5TM protein PF09437 IPR018291
Ponericin Ponericin PF07442 IPR010002
POP1 Ribonucleases P/MRP protein subunit POP1 PF06978 IPR009723
Popeye Popeye protein conserved region PF04831 IPR006916
POPLD POPLD (NUC188) domain PF08170 IPR012590
POR Pyruvate ferredoxin/flavodoxin oxidoreductase PF01558 IPR019752
Porin_1 Gram-negative porin PF00267 IPR001702
Porin_2 Porin subfamily PF02530 IPR003684
Porin_3 Eukaryotic porin PF01459 IPR001925
Porin_OmpG Outer membrane protein G (OmpG) PF09381 IPR018981
Porin_O_P Phosphate-selective porin O and P PF07396 IPR010870
Porphobil_deam Porphobilinogen deaminase, dipyromethane cofactor binding domain PF01379 IPR022417
Porphobil_deamC Porphobilinogen deaminase, C-terminal domain PF03900 IPR022418
Porph_ging Protein of unknown function (Porph_ging) PF09697 IPR019115
POR_N Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain PF01855 IPR002880
Potass_KdpF F subunit of K+-transporting ATPase (Potass_KdpF) PF09604 IPR011726
potato_inhibit Potato inhibitor I family PF00280 IPR000864
Potex_coat Potexvirus coat protein PF06184 IPR010392
POTRA_1 POTRA domain, FtsQ-type PF08478 IPR013685
POTRA_2 POTRA domain, ShlB-type PF08479 IPR013686
Poty_coat Potyvirus coat protein PF00767 IPR001592
Poty_PP Potyviridae polyprotein PF08440 IPR013648
Pou Pou domain - N-terminal to homeobox domain PF00157 IPR000327
POX Associated with HOX PF07526 IPR006563
Poxvirus_B22R Poxvirus B22R protein PF04395 IPR007490
Pox_A11 Poxvirus A11 Protein PF05061 IPR007755
Pox_A12 Poxvirus A12 protein PF04651 IPR006744
Pox_A14 Poxvirus virion envelope protein A14 PF05767 IPR008785
Pox_A21 Poxvirus A21 Protein PF05323 IPR007987
Pox_A22 Poxvirus A22 protein PF04848 IPR006932
Pox_A28 Poxvirus A28 family PF04584 IPR007664
Pox_A30L_A26L Orthopoxvirus A26L/A30L protein PF06086 IPR009285
Pox_A31 Poxvirus A31 protein PF05771 IPR008786
Pox_A32 Poxvirus A32 protein PF04665 IPR006758
Pox_A3L Poxvirus A3L Protein PF05288 IPR007952
Pox_A46 Poxvirus A4/B15 family PF06225
Pox_A51 Poxvirus A51 protein PF04948 IPR007032
Pox_A6 Poxvirus A6 protein PF04924 IPR007008
Pox_A8 VITF-3 subunit protein PF04745 IPR006834
Pox_A9 A9 protein conserved region PF04835 IPR006920
Pox_Ag35 Pox virus Ag35 surface protein PF03286 IPR004966
Pox_ATPase-GT mRNA capping enzyme N-terminal pox-viral ATPase and guanylyltransferase PF10640 IPR019602
Pox_A_type_inc Viral A-type inclusion protein repeat PF04508 IPR007596
Pox_C4_C10 Poxvirus C4/C10 protein PF03336 IPR005004
Pox_C7_F8A Poxvirus C7/F8A protein PF03287 IPR004967
Pox_D2 Pox virus D2 protein PF04701 IPR006791
Pox_D3 Chordopoxvirinae D3 protein PF04580 IPR007660
Pox_D5 Poxvirus D5 protein-like PF03288 IPR004968
Pox_E10 E10-like protein conserved region PF04805 IPR006890
Pox_E2 Poxvirus E2 protein PF04497 IPR021155
Pox_E6 Pox virus E6 protein PF04656 IPR006749
Pox_E8 Poxvirus E8 protein PF03394 IPR005057
Pox_F11 Poxvirus F11 protein PF04943 IPR007027
Pox_F12L Poxvirus F12L protein PF03337 IPR005005
Pox_F15 Poxvirus protein F15 PF04596 IPR007675
Pox_F16 Poxvirus F16 protein PF04708 IPR006798
Pox_F17 DNA-binding 11 kDa phosphoprotein PF04767 IPR006854
Pox_G5 Poxvirus G5 protein PF04599 IPR007678
Pox_G7 Poxvirus G7-like PF05503 IPR008787
Pox_H7 Late protein H7 PF04787 IPR006872
Pox_I1 Poxvirus protein I1 PF03289 IPR004969
Pox_I3 Poxvirus I3 ssDNA-binding protein PF04661 IPR006754
Pox_I5 Poxvirus protein I5 PF04713 IPR006803
Pox_I6 Poxvirus I6-like family PF04595 IPR007674
Pox_IFNR Poxvirus interferon gamma receptor PF04903
Pox_int_trans Poxvirus intermediate transcription factor PF05718 IPR008789
Pox_J1 Poxvirus J1 protein PF03338 IPR005006
Pox_L3_FP4 Poxvirus L3/FP4 protein PF03339 IPR005007
Pox_L5 Poxvirus L5 protein family PF04872 IPR006956
Pox_LP_H2 Viral late protein H2 PF03356 IPR005023
Pox_M2 Poxvirus M2 protein PF04887 IPR006971
Pox_MCEL mRNA capping enzyme PF03291 IPR004971
Pox_mRNA-cap Poxvirus mRNA capping enzyme, small subunit PF03341 IPR005009
Pox_N2L Poxvirus N2L protein PF05747
Pox_O1 Pox virus protein O1 PF04638
Pox_P21 Poxvirus P21 membrane protein PF05313 IPR007977
Pox_P35 Poxvirus P35 protein PF03213 IPR004900
Pox_P4A Poxvirus P4A protein PF03395 IPR005058
Pox_P4B Poxvirus P4B major core protein PF03292 IPR004972
Pox_polyA_pol Poxvirus poly(A) polymerase catalytic subunit PF03296 IPR004976
Pox_Rap94 RNA polymerase-associated transcription specificity factor, Rap94 PF03294 IPR004974
Pox_Rif Poxvirus rifampicin resistance protein PF03340 IPR005008
Pox_RNA_pol Poxvirus DNA-directed RNA polymerase, 18 kD subunit PF03293 IPR004973
Pox_RNA_Pol_19 Poxvirus DNA-directed RNA polymerase 19 kDa subunit PF05320 IPR007984
Pox_RNA_Pol_22 Poxvirus RNA polymerase 22 kDa subunit PF05273 IPR007937
Pox_RNA_pol_35 Poxvirus DNA-directed RNA polymerase, 35 kD subunit PF03396 IPR005059
Pox_ser-thr_kin Poxvirus serine/threonine protein kinase PF05445 IPR008790
Pox_T4_C Poxvirus T4 protein, C terminus PF04490 IPR007579
Pox_T4_N Poxvirus T4 protein, N terminus PF04491 IPR007580
Pox_TAA1 Poxvirus trans-activator protein A1 C-terminal PF03295 IPR004975
Pox_TAP Viral Trans-Activator Protein PF03355 IPR005022
Pox_VERT_large Poxvirus early transcription factor (VETF), large subunit PF04441 IPR007532
Pox_vIL-18BP Orthopoxvirus interleukin 18 binding protein PF05566 IPR008791
Pox_VLTF3 Poxvirus Late Transcription Factor VLTF3 like PF04947 IPR007031
Pox_VP8_L4R Poxvirus nucleic acid binding protein VP8 / L4R PF04498 IPR007586
PP-binding Phosphopantetheine attachment site PF00550 IPR006163
PP1 Phloem filament protein PP1 PF07430 IPR009994
PP1c_bdg Phosphatase-1 catalytic subunit binding region PF10488
PP1_inhibitor PKC-activated protein phosphatase-1 inhibitor PF05361 IPR008025
PP28 Casein kinase substrate phosphoprotein PP28 PF10252 IPR019380
PP2A_B_N Serine-threonine phosphatase 2A subunit B alpha and beta N-terminal domain PF10586
PP2A_B_subs_rcg Serine-threonine phosphatase 2A subunit B alpha and beta central domain PF10594
PP2C Protein phosphatase 2C PF00481 IPR014045
PP2C_C Protein serine/threonine phosphatase 2C, C-terminal domain PF07830 IPR012911
PPAK PPAK motif PF02818 IPR004168
PPC Bacterial pre-peptidase C-terminal domain PF04151 IPR007280
PPDK_N Pyruvate phosphate dikinase, PEP/pyruvate binding domain PF01326 IPR002192
PPE PPE family PF00823 IPR000030
PPI_Ypi1 Protein phosphatase inhibitor PF07491 IPR011107
PPK2 Polyphosphate kinase 2 PF03976 IPR022488
PPM_N Phosphopentomutase N-terminal PF08342
PPP4R2 PPP4R2 PF09184 IPR015267
PPP5 PPP5 PF08321 IPR013235
PPR PPR repeat PF01535 IPR002885
PPTA Protein prenyltransferase alpha subunit repeat PF01239 IPR002088
PPV_E1_C Papillomavirus helicase PF00519 IPR001177
PPV_E1_N E1 Protein, N terminal domain PF00524 IPR014000
PPV_E2_C E2 (early) protein, C terminal PF00511 IPR000427
PPV_E2_N E2 (early) protein, N terminal PF00508 IPR001866
Ppx-GppA Ppx/GppA phosphatase family PF02541 IPR003695
PP_kinase Polyphosphate kinase PF02503 IPR003414
PP_M1 Phosphoprotein PF03012 IPR004259
PQ-loop PQ loop repeat PF04193
PqiA Paraquat-inducible protein A PF04403 IPR007498
PQQ PQQ enzyme repeat PF01011 IPR002372
PqqA PqqA family PF08042 IPR011725
PqqD Coenzyme PQQ synthesis protein D (PqqD) PF05402 IPR008792
PQQ_C Pyrrolo-quinoline quinone coenzyme C-terminus PF10535 IPR019556
PQQ_N Pyrrolo-quinoline quinone coenzyme N-terminus PF10527 IPR019551
PRA-CH Phosphoribosyl-AMP cyclohydrolase PF01502 IPR002496
PRA-PH Phosphoribosyl-ATP pyrophosphohydrolase PF01503 IPR021130
PRA1 PRA1 family protein PF03208 IPR004895
PRAI N-(5'phosphoribosyl)anthranilate (PRA) isomerase PF00697 IPR001240
PRANC PRANC domain PF09372 IPR018272
PRC PRC-barrel domain PF05239 IPR007903
PRCC_Cterm Mitotic checkpoint protein PRCC_Cterm PF10253 IPR018800
PRCH Photosynthetic reaction centre, H-chain N-terminal region PF03967 IPR015810
PRD PRD domain PF00874 IPR011608
Prd1-P2 Bacteriophage Prd1, adsorption protein P2 PF09214 IPR015297
PRD_Mga M protein trans-acting positive regulator (MGA) PRD domain PF08270 IPR013236
Pre-SET Pre-SET motif PF05033 IPR007728
Prefoldin Prefoldin subunit PF02996 IPR004127
Prefoldin_2 Prefoldin subunit PF01920 IPR002777
PRELI PRELI-like family PF04707 IPR006797
Prenylcys_lyase Prenylcysteine lyase PF07156 IPR010795
Prenyltrans Prenyltransferase and squalene oxidase repeat PF00432 IPR001330
Prenyltransf Putative undecaprenyl diphosphate synthase PF01255 IPR001441
Presenilin Presenilin PF01080 IPR001108
Preseq_ALAS 5-aminolevulinate synthase presequence PF09029 IPR015118
PRE_C2HC Associated with zinc fingers PF07530
PRF Plethodontid receptivity factor PRF PF06875 IPR010681
PrgH Type III secretion system protein PrgH-EprH (PrgH) PF09480 IPR019029
PrgU PrgU-like protein PF09627 IPR018589
PRiA4_ORF3 Plasmid pRiA4b ORF-3-like protein PF07929 IPR012912
Pribosyltran Phosphoribosyl transferase domain PF00156 IPR000836
priB_priC Primosomal replication protein priB and priC PF07445 IPR010890
PriCT_1 Primase C terminal 1 (PriCT-1) PF08708 IPR014820
PriCT_2 Primase C terminal 2 (PriCT-2) PF08707 IPR014819
Prim-Pol Bifunctional DNA primase/polymerase, N-terminal PF09250 IPR015330
Prim_Zn_Ribbon Zinc-binding domain of primase-helicase PF08273 IPR013237
Prion Prion/Doppel alpha-helical domain PF00377 IPR022416
Prion_octapep Copper binding octapeptide repeat PF03991 IPR020949
Prismane Prismane/CO dehydrogenase family PF03063 IPR004137
PRK Phosphoribulokinase / Uridine kinase family PF00485 IPR006083
PrkA PrkA serine protein kinase C-terminal domain PF06798 IPR010650
PRKCSH Glucosidase II beta subunit-like protein PF07915 IPR012913
PrmA Ribosomal protein L11 methyltransferase (PrmA) PF06325 IPR010456
PRMT5 PRMT5 arginine-N-methyltransferase PF05185 IPR007857
Pro-kuma_activ Pro-kumamolisin, activation domain PF09286 IPR015366
Pro-MCH Pro-melanin-concentrating hormone (Pro-MCH) PF05824 IPR005456
Pro-NT_NN Neurotensin/neuromedin N precursor PF07421 IPR008055
PRO8NT PRO8NT (NUC069), PrP8 N-terminal domain PF08082 IPR012591
PROCN PROCN (NUC071) domain PF08083 IPR012592
PROCT PROCT (NUC072) domain PF08084 IPR012984
Profilin Profilin PF00235 IPR002097
Prog_receptor Progesterone receptor PF02161 IPR000128
Prok-TraM Prokaryotic Transcriptional repressor TraM PF09228 IPR015309
Prokineticin Prokineticin PF06607 IPR009523
Prominin Prominin PF05478 IPR008795
PRONE PRONE (Plant-specific Rop nucleotide exchanger) PF03759 IPR005512
Propeptide_C1 Peptidase family C1 propeptide PF08127 IPR012599
Propeptide_C25 Propeptide_C25 PF08126 IPR012600
Propep_M14 Carboxypeptidase activation peptide PF02244 IPR003146
ProQ ProQ/FINO family PF04352 IPR016103
ProRS-C_1 Prolyl-tRNA synthetase, C-terminal PF09180 IPR016061
ProRS-C_2 Prolyl-tRNA synthetase, C-terminal PF09181 IPR015264
ProSAAS ProSAAS precursor PF07259 IPR010832
Prosystemin Prosystemin PF07376 IPR009966
Protamine_3 Spermatozal protamine family PF08188 IPR012601
Protamine_P1 Protamine P1 PF00260 IPR000221
Protamine_P2 Sperm histone P2 PF00841 IPR000492
Proteasome Proteasome A-type and B-type PF00227 IPR001353
Proteasome_A_N Proteasome subunit A N-terminal signature PF10584 IPR000426
Proteasom_PSMB Proteasome non-ATPase 26S subunit PF10508 IPR019538
Prothymosin Prothymosin/parathymosin family PF03247 IPR004931
Protocadherin Protocadherin PF08374 IPR013585
Prot_inhib_II Potato type II proteinase inhibitor family PF02428 IPR003465
Prox1 Homeobox prospero-like protein (PROX1) PF05044 IPR007738
Pro_3_hydrox_C L-proline 3-hydroxylase, C-terminal PF05373 IPR008035
Pro_Al_protease Alpha-lytic protease prodomain PF02983 IPR004236
Pro_CA Carbonic anhydrase PF00484 IPR001765
Pro_dh Proline dehydrogenase PF01619 IPR002872
Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PF00160 IPR002130
Pro_racemase Proline racemase PF05544 IPR008794
Prp18 Prp18 domain PF02840 IPR004098
Prp19 Prp19/Pso4-like PF08606 IPR013915
PRP1_N PRP1 splicing factor, N-terminal PF06424 IPR010491
PRP3 pre-mRNA processing factor 3 (PRP3) PF08572 IPR013881
Prp31_C Prp31 C terminal domain PF09785 IPR019175
PRP38 PRP38 family PF03371 IPR005037
PRP4 pre-mRNA processing factor 4 (PRP4) like PF08799 IPR014906
PrpF PrpF protein PF04303 IPR007400
PrpR_N Propionate catabolism activator PF06506 IPR010524
PRRSV_2b Porcine reproductive and respiratory syndrome virus (PRRSV) 2b protein PF07069 IPR009775
PRRSV_Env PRRSV putative envelope protein PF02340 IPR003434
PRTP Herpesvirus processing and transport protein PF01366 IPR000501
PRT_C Plant phosphoribosyltransferase C-terminal PF08372 IPR013583
PsaA_PsaB Photosystem I psaA/psaB protein PF00223 IPR001280
PsaD PsaD PF02531 IPR003685
PsaL Photosystem I reaction centre subunit XI PF02605 IPR003757
PsaM Photosystem I protein M (PsaM) PF07465 IPR010010
PsaN Photosystem I reaction centre subunit N (PSAN or PSI-N) PF05479 IPR008796
PsaX PsaX family PF08078 IPR012986
Psb28 Psb28 protein PF03912 IPR005610
PsbH Photosystem II 10 kDa phosphoprotein PF00737 IPR001056
PsbI Photosystem II reaction centre I protein (PSII 4.8 kDa protein) PF02532 IPR003686
PsbJ PsbJ PF01788 IPR002682
PsbK Photosystem II 4 kDa reaction centre component PF02533 IPR003687
PsbL PsbL protein PF02419 IPR003372
PsbM Photosystem II reaction centre M protein (PsbM) PF05151 IPR007826
PsbN Photosystem II reaction centre N protein (psbN) PF02468 IPR003398
PsbP PsbP PF01789 IPR002683
PsbQ Oxygen evolving enhancer protein 3 (PsbQ) PF05757 IPR008797
PsbR Photosystem II 10 kDa polypeptide PsbR PF04725 IPR006814
PsbT Photosystem II reaction centre T protein PF01405 IPR001743
PsbU Photosystem II 12 kDa extrinsic protein (PsbU) PF06514 IPR010527
PsbW Photosystem II reaction centre W protein (PsbW) PF07123 IPR009806
PsbX Photosystem II reaction centre X protein (PsbX) PF06596 IPR009518
PsbY Photosystem II protein Y (PsbY) PF06298 IPR009388
PSCyt1 Planctomycete cytochrome C PF07635 IPR011429
PSCyt2 Protein of unknown function (DUF1549) PF07583 IPR011444
PSCyt3 Protein of unknown function (DUF1588) PF07627 IPR013039
PSD1 Protein of unknown function (DUF1553) PF07587
PSD2 Protein of unknown function (DUF1585) PF07624 IPR011478
PSD3 Protein of unknown function (DUF1587) PF07626 IPR013036
PSD4 Protein of unknown function (DUF1592) PF07631 IPR013042
PSD5 Protein of unknown function (DUF1595) PF07637 IPR013043
PseudoU_synth_1 tRNA pseudouridine synthase PF01416 IPR020097
PseudoU_synth_2 RNA pseudouridylate synthase PF00849 IPR006145
Psf1 Partner of SLD five, PSF1 PF03651
Psf2 Partner of SLD five, PSF2 PF04128
Psf3 Partner of SLD five, PSF3 PF06425
PSGP Apopolysialoglycoprotein (PSGP) PF07276 IPR009900
PSI Plexin repeat PF01437 IPR002165
PsiA PsiA protein PF06952 IPR009713
PsiB Plasmid SOS inhibition protein (PsiB) PF06290 IPR009385
PsiE Phosphate-starvation-inducible E PF06146 IPR020948
PsiF_repeat psiF repeat PF07769 IPR011690
PSII Photosystem II protein PF00421 IPR000932
PSI_8 Photosystem I reaction centre subunit VIII PF00796 IPR001302
PSI_PsaE Photosystem I reaction centre subunit IV / PsaE PF02427 IPR003375
PSI_PsaF Photosystem I reaction centre subunit III PF02507 IPR003666
PSI_PsaH Photosystem I reaction centre subunit VI PF03244 IPR004928
PSI_PsaJ Photosystem I reaction centre subunit IX / PsaJ PF01701 IPR002615
PSI_PSAK Photosystem I psaG / psaK PF01241 IPR000549
PSK Phytosulfokine precursor protein (PSK) PF06404 IPR009438
PSK_trans_fac Rv0623-like transcription factor PF07704 IPR011660
PSP PSP PF04046 IPR006568
PSP1 PSP1 C-terminal conserved region PF04468 IPR007557
PSP94 Beta-microseminoprotein (PSP-94) PF05825 IPR008735
PspA_IM30 PspA/IM30 family PF04012 IPR007157
PspB Phage shock protein B PF06667 IPR009554
PspC PspC domain PF04024 IPR007168
PSRP-3_Ycf65 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) PF04839 IPR006924
PSRT PSRT PF07636 IPR011504
PSS Phosphatidyl serine synthase PF03034 IPR004277
Psu Phage polarity suppression protein (Psu) PF07455 IPR010006
PS_Dcarbxylase Phosphatidylserine decarboxylase PF02666 IPR003817
PS_pyruv_trans Polysaccharide pyruvyl transferase PF04230 IPR007345
PT PT repeat PF04886 IPR006970
PTA_PTB Phosphate acetyl/butaryl transferase PF01515 IPR002505
PTB Phosphotyrosine-binding domain PF08416 IPR013625
PTE Phosphotriesterase family PF02126 IPR001559
PTEN_C2 C2 domain of PTEN tumour-suppressor protein PF10409 IPR014020
Pterin_4a Pterin 4 alpha carbinolamine dehydratase PF01329 IPR001533
Pterin_bind Pterin binding enzyme PF00809 IPR000489
PTH2 Peptidyl-tRNA hydrolase PTH2 PF01981 IPR002833
PTN_MK_C PTN/MK heparin-binding protein family, C-terminal domain PF01091 IPR020090
PTN_MK_N PTN/MK heparin-binding protein family, N-terminal domain PF05196 IPR020089
PTPA Phosphotyrosyl phosphate activator (PTPA) protein PF03095 IPR004327
PTPLA Protein tyrosine phosphatase-like protein, PTPLA PF04387 IPR007482
PTPS 6-pyruvoyl tetrahydropterin synthase PF01242 IPR007115
PTPS_related 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein PF10131 IPR018776
PTR2 POT family PF00854 IPR000109
PTS-HPr PTS HPr component phosphorylation site PF00381 IPR005698
PTSIIA_gutA PTS system glucitol/sorbitol-specific IIA component PF03829 IPR004716
PTSIIB_sorb PTS system sorbose subfamily IIB component PF03830 IPR004720
PTS_2-RNA RNA 2'-phosphotransferase, Tpt1 / KptA family PF01885 IPR002745
PTS_EIIA_1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PF00358 IPR001127
PTS_EIIA_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PF00359 IPR002178
PTS_EIIB phosphotransferase system, EIIB PF00367 IPR018113
PTS_EIIC Phosphotransferase system, EIIC PF02378 IPR003352
PTS_IIA PTS system, Lactose/Cellobiose specific IIA subunit PF02255 IPR003188
PTS_IIB PTS system, Lactose/Cellobiose specific IIB subunit PF02302 IPR003501
PTS_IIB_fruc PTS system, Fructose specific IIB subunit PF02379
PUA PUA domain PF01472 IPR002478
PUB PUB domain PF09409 IPR018997
PUCC PUCC protein PF03209 IPR004896
PucR Purine catabolism regulatory protein-like family PF07905 IPR012914
PUD Bacterial pullanase-associated domain PF03714 IPR005323
PUF Pumilio-family RNA binding repeat PF00806 IPR001313
PufQ PufQ cytochrome subunit PF05398 IPR008800
PUL PUL domain PF08324 IPR013535
PulS_OutS Bacterial chaperone lipoprotein (PulS_OutS) PF09691 IPR019114
PurA PurA ssDNA and RNA-binding protein PF04845 IPR006628
PurS Phosphoribosylformylglycinamidine (FGAM) synthase PF02700 IPR003850
Pur_DNA_glyco Methylpurine-DNA glycosylase (MPG) PF02245 IPR003180
PuR_N Bacterial purine repressor, N-terminal PF09182 IPR015265
Put_DNA-bind_N Putative DNA-binding protein N-terminus PF06971 IPR009718
Put_Phosphatase Putative Phosphatase PF06888 IPR006384
PV-1 PV-1 protein (PLVAP) PF06637 IPR009538
PvlArgDC Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) PF01862 IPR002724
PVL_ORF50 PVL ORF-50-like family PF07768 IPR011688
PWI PWI domain PF01480 IPR002483
PWP2 Periodic tryptophan protein 2 WD repeat associated presumed domain PF04047
PWWP PWWP domain PF00855 IPR000313
PX PX domain PF00787 IPR001683
PXA PXA domain PF02194 IPR003114
PYC_OADA Conserved carboxylase domain PF02436 IPR003379
PYNP_C Pyrimidine nucleoside phosphorylase C-terminal domain PF07831 IPR013102
Pyocin_S S-type Pyocin PF06958 IPR010715
PyrBI_leader PyrBI operon leader peptide PF08052 IPR012602
PyrI Aspartate carbamoyltransferase regulatory chain, allosteric domain PF01948 IPR020545
Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain PF00282 IPR002129
Pyridox_oxidase Pyridoxamine 5'-phosphate oxidase PF01243 IPR011576
PyrI_C Aspartate carbamoyltransferase regulatory chain, metal binding domain PF02748 IPR020542
Pyrophosphatase Inorganic pyrophosphatase PF00719 IPR008162
Pyr_excise Pyrimidine dimer DNA glycosylase PF03013 IPR004260
Pyr_redox Pyridine nucleotide-disulphide oxidoreductase PF00070 IPR001327
Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase PF07992 IPR013027
Pyr_redox_dim Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PF02852 IPR004099
PYST-C1 Plasmodium yoelii subtelomeric region (PYST-C1) PF09690 IPR006488
PY_rept_46 Plasmodium yoelii repeat (PY_rept_46) PF09689 IPR006489
P_C P protein C-terminus PF06640 IPR010588
P_fal_TIGR01639 Protein of unknown function (P_fal_TIGR01639) PF09687 IPR019111
P_gingi_FimA Porphyromonas gingivalis major fimbrial subunit protein (FimA) PF06321
P_proprotein Proprotein convertase P-domain PF01483 IPR002884
QCR10 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) PF09796 IPR019182
QH-AmDH_gamma Quinohemoprotein amine dehydrogenase, gamma subunit PF08992 IPR015084
QLQ QLQ PF08880 IPR014978
QPP QPP PF07640 IPR011507
QRPTase_C Quinolinate phosphoribosyl transferase, C-terminal domain PF01729 IPR002638
QRPTase_N Quinolinate phosphoribosyl transferase, N-terminal domain PF02749 IPR022412
QueT QueT transporter PF06177 IPR010387
Queuosine_synth Queuosine biosynthesis protein PF02547 IPR003699
R3H R3H domain PF01424 IPR001374
RA Ras association (RalGDS/AF-6) domain PF00788 IPR000159
Rab5-bind Rab5 binding PF09311 IPR015390
Rab5ip Rab5-interacting protein (Rab5ip) PF07019
Rabaptin Rabaptin PF03528 IPR018514
RabGGT_insert Rab geranylgeranyl transferase alpha-subunit, insert domain PF07711 IPR009087
Rac1 Rac1-binding domain PF09632 IPR019093
Rad1 Repair protein Rad1/Rec1/Rad17 PF02144 IPR003021
Rad10 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) PF03834 IPR004579
Rad17 Rad17 cell cycle checkpoint protein PF03215
Rad21_Rec8 Conserved region of Rad21 / Rec8 like protein PF04824 IPR006909
Rad21_Rec8_N N terminus of Rad21 / Rec8 like protein PF04825 IPR006910
Rad33 Rad33 PF08730 IPR014841
Rad4 Rad4 transglutaminase-like domain PF03835 IPR018325
Rad50_zn_hook Rad50 zinc hook motif PF04423 IPR007517
Rad51 Rad51 PF08423 IPR013632
Rad52_Rad22 Rad52/22 family double-strand break repair protein PF04098 IPR007232
Rad54_N Rad54 N terminal PF08658 IPR013967
Rad9 Rad9 PF04139 IPR007268
Rad9_Rad53_bind Fungal Rad9-like Rad53-binding PF08605 IPR013914
Radial_spoke Radial spokehead-like protein PF04712
Radial_spoke_3 Radial spoke protein 3 PF06098 IPR009290
Radical_SAM Radical SAM superfamily PF04055 IPR007197
Radical_SAM_N Radical SAM N-terminal PF08497 IPR013704
Raffinose_syn Raffinose synthase or seed inhibition protein Sip1 PF05691 IPR008811
RAG2 Recombination activating protein 2 PF03089 IPR004321
RAI1 RAI1 like PF08652 IPR013961
RAI16-like Retinoic acid induced 16-like protein PF10257 IPR019384
RALF Rapid ALkalinization Factor (RALF) PF05498 IPR008801
RAMP Receptor activity modifying family PF04901 IPR006985
RAMP4 Ribosome associated membrane protein RAMP4 PF06624 IPR010580
RAMPs RAMP superfamily PF03787 IPR005537
Ran-binding RanGTP-binding protein PF05508 IPR008812
RanBPM_CRA Ran binding protein in the microtubule-organising centre PF10607 IPR019589
RanGAP1_C RanGAP1 C-terminal domain PF07834 IPR009109
Ran_BP1 RanBP1 domain PF00638 IPR000156
RAP RAP domain PF08373 IPR013584
RAP-1 Rhoptry-associated protein 1 (RAP-1) PF03085 IPR004318
RAP1 Rhoptry-associated protein 1 (RAP-1) PF07218 IPR009864
Rap1-DNA-bind Rap1, DNA-binding PF09197 IPR015280
Rapamycin_bind Rapamycin binding domain PF08771 IPR009076
Rapsyn_N Rapsyn N-terminal myristoylation and linker region PF10579 IPR019568
Rap_GAP Rap/ran-GAP PF02145 IPR000331
Ras Ras family PF00071 IPR013753
RasGAP GTPase-activator protein for Ras-like GTPase PF00616 IPR001936
RasGAP_C RasGAP C-terminus PF03836 IPR000593
RasGEF RasGEF domain PF00617 IPR001895
RasGEF_N Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif PF00618 IPR000651
Rb-bdg_C_Cenp-F Rb-binding domain of kinetochore protein Cenp-F/LEK1 PF10490 IPR018302
RBB1NT RBB1NT (NUC162) domain PF08169 IPR012603
RBD Raf-like Ras-binding domain PF02196 IPR003116
RBD-FIP FIP domain PF09457 IPR019018
RBDV_coat Raspberry bushy dwarf virus coat protein PF06593 IPR009516
RBFA Ribosome-binding factor A PF02033 IPR000238
RBM1CTR RBM1CTR (NUC064) family PF08081 IPR012604
RbsD_FucU RbsD / FucU transport protein family PF05025 IPR007721
RB_A Retinoblastoma-associated protein A domain PF01858 IPR002720
RB_B Retinoblastoma-associated protein B domain PF01857 IPR002719
Rb_C Rb C-terminal domain PF08934 IPR015030
RC-P840_PscD Photosystem P840 reaction centre protein PscD PF10657 IPR019608
RcbX RbcX protein PF02341 IPR003435
RCC1 Regulator of chromosome condensation (RCC1) PF00415 IPR000408
RCC_reductase Red chlorophyll catabolite reductase (RCC reductase) PF06405 IPR009439
Rcd1 Cell differentiation family, Rcd1-like PF04078 IPR007216
RcsC RcsC Alpha-Beta-Loop (ABL) PF09456 IPR019017
RCSD RCSD region PF05177 IPR007850
RDD RDD family PF06271 IPR010432
RdgC Putative exonuclease, RdgC PF04381 IPR007476
RdRP RNA dependent RNA polymerase PF05183 IPR007855
RdRP_1 RNA dependent RNA polymerase PF00680 IPR001205
RdRP_2 RNA dependent RNA polymerase PF00978 IPR001788
RdRP_3 Viral RNA dependent RNA polymerase PF00998 IPR002166
RdRP_4 Viral RNA-directed RNA-polymerase PF02123 IPR001795
RdRP_5 Reovirus RNA-dependent RNA polymerase lambda 3 PF07925 IPR012915
RDV-p3 Rice dwarf virus p3 PF09231 IPR015312
RecA recA bacterial DNA recombination protein PF00154 IPR013765
Recep_L_domain Receptor L domain PF01030 IPR000494
RecO Recombination protein O PF02565 IPR003717
Recombinase Recombinase PF07508 IPR011109
RecQ5 RecQ helicase protein-like 5 (RecQ5) PF06959 IPR010716
RecR RecR protein PF02132 IPR015967
RecT RecT family PF03837 IPR018330
RecU Recombination protein U PF03838 IPR004612
RecX RecX family PF02631 IPR003783
Red1 Rec10 / Red1 PF07964 IPR012491
Redoxin Redoxin PF08534 IPR013740
RED_C RED-like protein C-terminal region PF07807 IPR012492
RED_N RED-like protein N-terminal region PF07808 IPR012916
Reeler Reeler domain PF02014 IPR002861
REF Rubber elongation factor protein (REF) PF05755 IPR008802
REGB_T4 Endoribonuclease RegB T4-bacteriophage encoded PF10715 IPR019653
Reg_prop Two component regulator propeller PF07494 IPR011110
REJ REJ domain PF02010 IPR002859
Relaxase Relaxase/Mobilisation nuclease domain PF03432 IPR005094
RelA_SpoT Region found in RelA / SpoT proteins PF04607 IPR007685
RelB RelB antitoxin PF04221 IPR007337
Remorin_C Remorin, C-terminal region PF03763 IPR005516
Remorin_N Remorin, N-terminal region PF03766 IPR005518
Renin_r Renin receptor-like protein PF07850 IPR012493
Reoviridae_Vp9 Reoviridae VP9 PF08978 IPR015072
Reovirus_cap Reovirus outer capsid protein, Sigma 3 PF00979 IPR000153
Reovirus_L2 Reovirus core-spike protein lambda-2 (L2) PF06016 IPR010311
Reovirus_M2 Reovirus major virion structural protein Mu-1/Mu-1C (M2) PF05993 IPR009113
Reovirus_Mu2 Reovirus minor core protein Mu-2 PF07781 IPR012494
Reo_P9 Reovirus P9-like family PF06043 IPR009268
Reo_sigma1 Reovirus viral attachment protein sigma 1 PF01664 IPR002592
Reo_sigmaC Reovirus sigma C capsid protein PF04582 IPR007662
Rep-A_N Replication factor-A protein 1, N-terminal domain PF04057 IPR007199
RepA1_leader Tap RepA1 leader peptide PF08048 IPR012605
RepA_C Plasmid encoded RepA protein PF04796 IPR006881
RepA_N Replication initiator protein A (RepA) N-terminus PF06970 IPR010724
RepB RepB plasmid partitioning protein PF07506 IPR011111
RepB-RCR_reg Replication regulatory protein RepB PF10723 IPR019661
RepC Replication protein C (RepC) PF06504 IPR010522
RepL Firmicute plasmid replication protein (RepL) PF05732 IPR008813
Replicase Replicase family PF03090 IPR004322
Reprolysin Reprolysin (M12B) family zinc metalloprotease PF01421 IPR001590
Rep_1 Replication protein PF01446 IPR000989
Rep_2 Plasmid replication protein PF01719 IPR002631
Rep_3 Initiator Replication protein PF01051 IPR000525
Rep_4 Yeast trans-acting factor (REP1/REP2) PF05797 IPR008897
Rep_fac-A_3 Replication factor A protein 3 PF08661 IPR013970
Rep_fac-A_C Replication factor-A C terminal domain PF08646 IPR013955
Rep_fac_C Replication factor C PF08542 IPR013748
Rep_N Rep protein catalytic domain like PF08724 IPR014835
Rep_Org_C Putative replisome organiser protein C-terminus PF06926 IPR009696
Rep_trans Replication initiation factor PF02486 IPR003491
Rer1 Rer1 family PF03248 IPR004932
RES RES domain PF08808 IPR014914
ResB ResB-like family PF05140 IPR007816
ResIII Type III restriction enzyme, res subunit PF04851 IPR006935
Resistin Resistin PF06954 IPR009714
Resolvase Resolvase, N terminal domain PF00239 IPR006119
Response_reg Response regulator receiver domain PF00072 IPR001789
Reticulon Reticulon PF02453 IPR003388
Retinin_C Drosophila Retinin like protein PF04527 IPR007614
Retrotrans_gag Retrotransposon gag protein PF03732 IPR005162
Retro_M Retroviral M domain PF02813 IPR004028
Ret_tiss Retinal tissue protein PF10044 IPR018737
REV REV protein (anti-repression trans-activator protein) PF00424 IPR000625
RE_AccI AccI restriction endonuclease PF09545 IPR019054
RE_Alw26IDE Type II restriction endonuclease (RE_Alw26IDE) PF09665 IPR014328
RE_AlwI AlwI restriction endonuclease PF09491 IPR018573
RE_ApaLI ApaLI-like restriction endonuclease PF09499 IPR019036
RE_Bpu10I Bpu10I restriction endonuclease PF09549 IPR018577
RE_Bsp6I Bsp6I restriction endonuclease PF09504 IPR019037
RE_BstXI BstXI restriction endonuclease PF09552 IPR018578
RE_CfrBI CfrBI restriction endonuclease PF09516 IPR019042
RE_Eco29kI Eco29kI restriction endonuclease PF09517 IPR018575
RE_Eco47II Eco47II restriction endonuclease PF09553 IPR019057
RE_HaeII HaeII restriction endonuclease PF09554 IPR019058
RE_HaeIII HaeIII restriction endonuclease PF09556 IPR019059
RE_HindIII HindIII restriction endonuclease PF09518 IPR019043
RE_HindVP HindVP restriction endonuclease PF09519 IPR019044
RE_HpaII HpaII restriction endonuclease PF09561 IPR019062
RE_LlaJI LlaJI restriction endonuclease PF09563 IPR018579
RE_LlaMI LlaMI restriction endonuclease PF09562 IPR019063
RE_MamI MamI restriction endonuclease PF09567 IPR019067
RE_MjaI MjaI restriction endonuclease PF09568
RE_MjaII MjaII restriction endonuclease PF09520 IPR019045
RE_NgoBV NgoBV restriction endonuclease PF09564 IPR019064
RE_NgoFVII NgoFVII restriction endonuclease PF09565 IPR019065
RE_NgoPII NgoPII restriction endonuclease PF09521 IPR019046
RE_R_Pab1 R.Pab1 restriction endonuclease PF09522 IPR018576
RE_SacI SacI restriction endonuclease PF09566 IPR019066
RE_ScaI ScaI restriction endonuclease PF09569 IPR019069
RE_SinI SinI restriction endonuclease PF09570 IPR019070
RE_TaqI TaqI restriction endonuclease PF09573 IPR019073
RE_XamI XamI restriction endonuclease PF09572 IPR019072
RE_XcyI XcyI restriction endonuclease PF09571 IPR019071
RF-1 RF-1 domain PF00472 IPR000352
RFC-E_C Clamp-loader complex subunit E C-terminus PF10424 IPR019483
RFC1 Replication factor RFC1 C terminal domain PF08519 IPR013725
RFPL3_antisense Ret finger protein-like 3 antisense PF10489 IPR019524
Rft-1 Rft protein PF04506 IPR007594
RFX1_trans_act RFX1 transcription activation region PF04589 IPR007668
RFX_DNA_binding RFX DNA-binding domain PF02257 IPR003150
RGM_C Repulsive guidance molecule (RGM) C-terminus PF06534 IPR009496
RGM_N Repulsive guidance molecule (RGM) N-terminus PF06535 IPR010536
RGP Reversibly glycosylated polypeptide PF03214 IPR004901
Rgp1 Rgp1 PF08737 IPR014848
RgpF Rhamnan synthesis protein F PF05045 IPR007739
RGS Regulator of G protein signaling domain PF00615 IPR000342
RGS-like Regulator of G protein signalling-like domain PF09128 IPR015212
RhaA L-rhamnose isomerase (RhaA) PF06134 IPR009308
Rhabdo_glycop Rhabdovirus spike glycoprotein PF00974 IPR001903
Rhabdo_M1 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) PF03342 IPR005010
Rhabdo_M2 Rhabdovirus matrix protein M2 PF04785 IPR006870
Rhabdo_matrix Rhabdovirus matrix protein PF03397 IPR005060
Rhabdo_ncap Rhabdovirus nucleocapsid protein PF00945 IPR000448
Rhabdo_ncap_2 Rhabdovirus nucleoprotein PF03216 IPR004902
Rhabdo_NV Rhabdovirus Non-virion protein PF02484 IPR003490
Rhamnogal_lyase Rhamnogalacturonate lyase family PF06045 IPR010325
RhaT L-rhamnose-proton symport protein (RhaT) PF06379 IPR010476
RHD Rel homology domain (RHD) PF00554 IPR011539
RHD3 Root hair defective 3 GTP-binding protein (RHD3) PF05879 IPR008803
RhgB_N Rhamnogalacturonase B, N-terminal PF09284 IPR015364
RHH_1 Ribbon-helix-helix protein, copG family PF01402 IPR002145
RHH_2 Uncharacterised protein family (UPF0156) PF03693
Rhodanese Rhodanese-like domain PF00581 IPR001763
Rhodopsin_N Amino terminal of the G-protein receptor rhodopsin PF10413 IPR019477
RhoGAP RhoGAP domain PF00620 IPR000198
RhoGEF RhoGEF domain PF00621 IPR000219
Rhomboid Rhomboid family PF01694
Rho_Binding Rho Binding PF08912 IPR015008
Rho_GDI RHO protein GDP dissociation inhibitor PF02115 IPR000406
Rho_N Rho termination factor, N-terminal domain PF07498 IPR011112
Rho_RNA_bind Rho termination factor, RNA-binding domain PF07497 IPR011113
RHS RHS protein PF03527 IPR001826
RHSP Retrotransposon hot spot protein PF07999 IPR006518
RHS_repeat RHS Repeat PF05593 IPR006530
Rhv picornavirus capsid protein PF00073 IPR001676
Rib Rib/alpha-like repeat PF08428 IPR012706
RIB43A RIB43A PF05914 IPR008805
RibD_C RibD C-terminal domain PF01872 IPR002734
Ribonuclease ribonuclease PF00545 IPR000026
Ribonuclease_3 RNase3 domain PF00636 IPR000999
Ribonuclease_BN Ribonuclease BN-like family PF03631 IPR004664
Ribonuclease_P Ribonuclease P PF00825 IPR000100
Ribonuclease_T2 Ribonuclease T2 family PF00445 IPR001568
Ribonuc_2-5A Ribonuclease 2-5A PF06479 IPR010513
Ribonuc_L-PSP Endoribonuclease L-PSP PF01042 IPR006175
Ribonuc_P_40 Ribonuclease P 40kDa (Rpp40) subunit PF08584 IPR013893
Ribonuc_red_2_N Class II vitamin B12-dependent ribonucleotide reductase PF08471 IPR013678
Ribonuc_red_lgC Ribonucleotide reductase, barrel domain PF02867 IPR000788
Ribonuc_red_lgN Ribonucleotide reductase, all-alpha domain PF00317 IPR013509
Ribonuc_red_sm Ribonucleotide reductase, small chain PF00268 IPR000358
Ribophorin_I Ribophorin I PF04597 IPR007676
Ribophorin_II Ribophorin II (RPN2) PF05817 IPR008814
Ribosomal_60s 60s Acidic ribosomal protein PF00428 IPR001813
Ribosomal_L1 Ribosomal protein L1p/L10e family PF00687 IPR002143
Ribosomal_L10 Ribosomal protein L10 PF00466 IPR001790
Ribosomal_L11 Ribosomal protein L11, RNA binding domain PF00298 IPR020783
Ribosomal_L11_N Ribosomal protein L11, N-terminal domain PF03946 IPR020784
Ribosomal_L12 Ribosomal protein L7/L12 C-terminal domain PF00542 IPR013823
Ribosomal_L13 Ribosomal protein L13 PF00572 IPR005822
Ribosomal_L13e Ribosomal protein L13e PF01294 IPR001380
Ribosomal_L14 Ribosomal protein L14p/L23e PF00238 IPR000218
Ribosomal_L14e Ribosomal protein L14 PF01929 IPR002784
Ribosomal_L15 Ribosomal protein L15 amino terminal region PF01305
Ribosomal_L15e Ribosomal L15 PF00827 IPR000439
Ribosomal_L16 Ribosomal protein L16p/L10e PF00252 IPR016180
Ribosomal_L17 Ribosomal protein L17 PF01196 IPR000456
Ribosomal_L18ae Ribosomal L18ae protein family PF01775 IPR021138
Ribosomal_L18e Eukaryotic ribosomal protein L18 PF00828 IPR021131
Ribosomal_L18p Ribosomal L18p/L5e family PF00861 IPR005484
Ribosomal_L19 Ribosomal protein L19 PF01245 IPR001857
Ribosomal_L19e Ribosomal protein L19e PF01280 IPR000196
Ribosomal_L2 Ribosomal Proteins L2, RNA binding domain PF00181 IPR022666
Ribosomal_L20 Ribosomal protein L20 PF00453 IPR005813
Ribosomal_L21e Ribosomal protein L21e PF01157 IPR001147
Ribosomal_L21p Ribosomal prokaryotic L21 protein PF00829 IPR001787
Ribosomal_L22 Ribosomal protein L22p/L17e PF00237 IPR001063
Ribosomal_L22e Ribosomal L22e protein family PF01776 IPR002671
Ribosomal_L23 Ribosomal protein L23 PF00276 IPR013025
Ribosomal_L23eN Ribosomal protein L23, N-terminal domain PF03939 IPR005633
Ribosomal_L24e Ribosomal protein L24e PF01246 IPR000988
Ribosomal_L25p Ribosomal L25p family PF01386 IPR020055
Ribosomal_L27 Ribosomal L27 protein PF01016 IPR001684
Ribosomal_L27e Ribosomal L27e protein family PF01777 IPR001141
Ribosomal_L28 Ribosomal L28 family PF00830 IPR001383
Ribosomal_L28e Ribosomal L28e protein family PF01778 IPR002672
Ribosomal_L29 Ribosomal L29 protein PF00831 IPR001854
Ribosomal_L29e Ribosomal L29e protein family PF01779 IPR002673
Ribosomal_L2_C Ribosomal Proteins L2, C-terminal domain PF03947 IPR022669
Ribosomal_L3 Ribosomal protein L3 PF00297 IPR000597
Ribosomal_L30 Ribosomal protein L30p/L7e PF00327 IPR000517
Ribosomal_L30_N Ribosomal L30 N-terminal domain PF08079 IPR012988
Ribosomal_L31 Ribosomal protein L31 PF01197 IPR002150
Ribosomal_L31e Ribosomal protein L31e PF01198 IPR000054
Ribosomal_L32e Ribosomal protein L32 PF01655 IPR001515
Ribosomal_L32p Ribosomal L32p protein family PF01783 IPR002677
Ribosomal_L33 Ribosomal protein L33 PF00471 IPR001705
Ribosomal_L34 Ribosomal protein L34 PF00468 IPR000271
Ribosomal_L34e Ribosomal protein L34e PF01199 IPR008195
Ribosomal_L35Ae Ribosomal protein L35Ae PF01247 IPR001780
Ribosomal_L35p Ribosomal protein L35 PF01632 IPR021137
Ribosomal_L36 Ribosomal protein L36 PF00444 IPR000473
Ribosomal_L36e Ribosomal protein L36e PF01158 IPR000509
Ribosomal_L37 Mitochondrial ribosomal protein L37 PF08561 IPR013870
Ribosomal_L37ae Ribosomal L37ae protein family PF01780 IPR002674
Ribosomal_L37e Ribosomal protein L37e PF01907 IPR001569
Ribosomal_L38e Ribosomal L38e protein family PF01781 IPR002675
Ribosomal_L39 Ribosomal L39 protein PF00832 IPR000077
Ribosomal_L4 Ribosomal protein L4/L1 family PF00573 IPR002136
Ribosomal_L40e Ribosomal L40e family PF01020 IPR001975
Ribosomal_L41 Ribosomal protein L41 PF05162 IPR007836
Ribosomal_L44 Ribosomal protein L44 PF00935 IPR000552
Ribosomal_L5 Ribosomal protein L5 PF00281 IPR020927
Ribosomal_L5_C ribosomal L5P family C-terminus PF00673 IPR020928
Ribosomal_L6 Ribosomal protein L6 PF00347 IPR020040
Ribosomal_L6e Ribosomal protein L6e PF01159 IPR000915
Ribosomal_L6e_N Ribosomal protein L6, N-terminal domain PF03868 IPR005568
Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PF01248 IPR004038
Ribosomal_L9_C Ribosomal protein L9, C-terminal domain PF03948 IPR020069
Ribosomal_L9_N Ribosomal protein L9, N-terminal domain PF01281 IPR020070
Ribosomal_LX Ribosomal LX protein PF01911
Ribosomal_MRP8 Mitochondrial Ribosomal protein MRP8 PF07957 IPR012917
Ribosomal_S10 Ribosomal protein S10p/S20e PF00338 IPR001848
Ribosomal_S11 Ribosomal protein S11 PF00411 IPR001971
Ribosomal_S12 Ribosomal protein S12 PF00164 IPR006032
Ribosomal_S13 Ribosomal protein S13/S18 PF00416 IPR001892
Ribosomal_S13_N Ribosomal S13/S15 N-terminal domain PF08069 IPR012606
Ribosomal_S14 Ribosomal protein S14p/S29e PF00253 IPR001209
Ribosomal_S15 Ribosomal protein S15 PF00312 IPR000589
Ribosomal_S16 Ribosomal protein S16 PF00886 IPR000307
Ribosomal_S17 Ribosomal protein S17 PF00366 IPR000266
Ribosomal_S17e Ribosomal S17 PF00833 IPR001210
Ribosomal_S18 Ribosomal protein S18 PF01084 IPR001648
Ribosomal_S19 Ribosomal protein S19 PF00203 IPR002222
Ribosomal_S19e Ribosomal protein S19e PF01090 IPR001266
Ribosomal_S2 Ribosomal protein S2 PF00318 IPR001865
Ribosomal_S20p Ribosomal protein S20 PF01649 IPR002583
Ribosomal_S21 Ribosomal protein S21 PF01165 IPR001911
Ribosomal_S21e Ribosomal protein S21e PF01249 IPR001931
Ribosomal_S22 30S ribosomal protein subunit S22 family PF08136 IPR012607
Ribosomal_S23p S23 ribosomal protein PF05635 IPR008815
Ribosomal_S24e Ribosomal protein S24e PF01282 IPR001976
Ribosomal_S25 S25 ribosomal protein PF03297 IPR004977
Ribosomal_S26e Ribosomal protein S26e PF01283 IPR000892
Ribosomal_S27 Ribosomal protein S27a PF01599 IPR002906
Ribosomal_S27e Ribosomal protein S27 PF01667 IPR000592
Ribosomal_S28e Ribosomal protein S28e PF01200 IPR000289
Ribosomal_S30 Ribosomal protein S30 PF04758 IPR006846
Ribosomal_S30AE Sigma 54 modulation protein / S30EA ribosomal protein PF02482 IPR003489
Ribosomal_S39 Ribosomal subunit 39S PF10501 IPR018305
Ribosomal_S3Ae Ribosomal S3Ae family PF01015 IPR001593
Ribosomal_S3_C Ribosomal protein S3, C-terminal domain PF00189 IPR001351
Ribosomal_S3_N Ribosomal protein S3, N-terminal domain PF00417 IPR008282
Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain PF00163 IPR001912
Ribosomal_S4e Ribosomal family S4e PF00900 IPR013845
Ribosomal_S5 Ribosomal protein S5, N-terminal domain PF00333 IPR013810
Ribosomal_S5_C Ribosomal protein S5, C-terminal domain PF03719 IPR005324
Ribosomal_S6 Ribosomal protein S6 PF01250 IPR000529
Ribosomal_S6e Ribosomal protein S6e PF01092 IPR001377
Ribosomal_S7 Ribosomal protein S7p/S5e PF00177 IPR000235
Ribosomal_S7e Ribosomal protein S7e PF01251 IPR000554
Ribosomal_S8 Ribosomal protein S8 PF00410 IPR000630
Ribosomal_S8e Ribosomal protein S8e PF01201 IPR022309
Ribosomal_S9 Ribosomal protein S9/S16 PF00380 IPR000754
Ribul_P_3_epim Ribulose-phosphate 3 epimerase family PF00834 IPR000056
Rib_5-P_isom_A Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PF06026 IPR004788
Rib_hydrolayse ADP-ribosyl cyclase PF02267 IPR003193
Rib_recp_KP_reg Ribosome receptor lysine/proline rich region PF05104 IPR007794
RIC1 RIC1 PF07064 IPR009771
Ric8 Guanine nucleotide exchange factor synembryn PF10165 IPR019318
RICH RICH domain PF05062 IPR007756
Ricin_B_lectin Ricin-type beta-trefoil lectin domain PF00652 IPR000772
Rick_17kDa_Anti Rickettsia 17 kDa surface antigen PF05433 IPR008816
Rieske Rieske [2Fe-2S] domain PF00355 IPR017941
Rifin_STEVOR Rifin/stevor family PF02009 IPR002858
RIH_assoc RyR and IP3R Homology associated PF08454 IPR013662
RIIa Regulatory subunit of type II PKA R-subunit PF02197 IPR003117
RII_binding_1 RII binding domain PF10522 IPR018459
RimK RimK-like ATP-grasp domain PF08443 IPR013651
RimM RimM N-terminal domain PF01782 IPR002676
RinB Transcriptional activator RinB PF06116 IPR009300
Ring_hydroxyl_A Ring hydroxylating alpha subunit (catalytic domain) PF00848 IPR015879
Ring_hydroxyl_B Ring hydroxylating beta subunit PF00866 IPR000391
RINT1_TIP1 RINT-1 / TIP-1 family PF04437 IPR007528
RIO1 RIO1 family PF01163 IPR018934
Rio2_N Rio2, N-terminal PF09202 IPR015285
RIP Ribosome inactivating protein PF00161 IPR001574
RLI Possible metal-binding domain in RNase L inhibitor, RLI PF04068 IPR007209
RLL Putative carnitine deficiency-associated protein PF10036 IPR019265
RMF Ribosome modulation factor PF04957 IPR007040
RmlD_sub_bind RmlD substrate binding domain PF04321 IPR005913
RMMBL RNA-metabolising metallo-beta-lactamase PF07521 IPR011108
RmuC RmuC family PF02646 IPR003798
RNA12 RNA12 protein PF10443 IPR018850
RnaseA Pancreatic ribonuclease PF00074 IPR001427
RnaseH RNase H PF00075 IPR002156
RNaseH_C T4 RNase H, C terminal PF09293 IPR015372
RNase_E_G Ribonuclease E/G family PF10150 IPR019307
RNase_H1_sml Ribonuclease H1/H2 small subunit PF08615 IPR013924
RNase_H2-Ydr279 Ydr279p protein family (RNase H2 complex component) PF09468 IPR019024
RNase_HII Ribonuclease HII PF01351 IPR001352
RNase_PH 3' exoribonuclease family, domain 1 PF01138 IPR001247
RNase_PH_C 3' exoribonuclease family, domain 2 PF03725 IPR015847
RNase_P_p30 RNase P subunit p30 PF01876 IPR002738
RNase_P_pop3 RNase P subunit Pop3 PF08228 IPR013241
RNase_P_Rpp14 Rpp14/Pop5 family PF01900 IPR002759
RNA_bind RNA binding domain PF08675 IPR014789
RNA_bind_2 Predicted RNA-binding protein PF10133 IPR019300
RNA_capsid Calicivirus putative RNA polymerase/capsid protein PF03035 IPR004278
RNA_GG_bind PHAX RNA-binding domain PF10258 IPR019385
RNA_helicase RNA helicase PF00910 IPR000605
RNA_ligase RNA ligase PF09414 IPR021122
RNA_lig_DRB0094 Probable RNA ligase (RNA_lig_DRB0094) PF09513
RNA_lig_T4_1 T4 RNA ligase (RNA_lig_T4_1) PF09511 IPR019039
RNA_Me_trans Predicted SAM-dependent RNA methyltransferase PF04252 IPR007364
RNA_pol DNA-dependent RNA polymerase PF00940 IPR002092
RNA_polI_A14 Yeast RNA polymerase I subunit RPA14 PF08203
RNA_polI_A34 DNA-directed RNA polymerase I subunit RPA34.5 PF08208 IPR013240
RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain PF01000 IPR011262
RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain PF03118 IPR011260
RNA_pol_delta DNA-directed RNA polymerase delta subunit PF05066 IPR007759
RNA_pol_III_C17 RNA polymerase III subunit C17 PF09417
RNA_pol_I_A49 A49-like RNA polymerase I associated factor PF06870 IPR009668
RNA_pol_I_TF RNA polymerase I specific initiation factor PF04090 IPR007224
RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain PF01193 IPR011261
RNA_POL_M_15KD RNA polymerases M/15 Kd subunit PF02150 IPR001529
RNA_pol_N RNA polymerases N / 8 kDa subunit PF01194 IPR000268
RNA_pol_Rbc25 RNA polymerase III subunit Rpc25 PF08292 IPR013238
RNA_pol_Rpa2_4 RNA polymerase I, Rpa2 specific domain PF06883 IPR009674
RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 PF04997 IPR007080
RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 PF00623 IPR000722
RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 PF04983 IPR007066
RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 PF05000 IPR007083
RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 PF04998 IPR007081
RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 PF04992 IPR007075
RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 PF04990 IPR007073
RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat PF05001 IPR000684
RNA_pol_Rpb2_1 RNA polymerase beta subunit PF04563 IPR007644
RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 PF04561 IPR007642
RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 PF04565 IPR007645
RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 PF04566 IPR007646
RNA_pol_Rpb2_45 RNA polymerase beta subunit external 1 domain PF10385 IPR019462
RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 PF04567 IPR007647
RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 PF00562 IPR007120
RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 PF04560 IPR007641
RNA_pol_Rpb4 RNA polymerase Rpb4 PF03874 IPR005574
RNA_pol_Rpb5_C RNA polymerase Rpb5, C-terminal domain PF01191 IPR000783
RNA_pol_Rpb5_N RNA polymerase Rpb5, N-terminal domain PF03871 IPR005571
RNA_pol_Rpb6 RNA polymerase Rpb6 PF01192 IPR006110
RNA_pol_Rpb7_N RNA polymerase Rpb7-like, N-terminal domain PF03876 IPR005576
RNA_pol_Rpb8 RNA polymerase Rpb8 PF03870 IPR005570
RNA_pol_Rpc34 RNA polymerase Rpc34 subunit PF05158 IPR007832
RNA_pol_Rpc4 RNA polymerase III RPC4 PF05132 IPR007811
RNA_pol_Rpc82 RNA polymerase III subunit RPC82 PF05645 IPR008806
RNA_replicase_B RNA replicase, beta-chain PF03431 IPR005093
RNB RNB domain PF00773 IPR001900
Rnf-Nqr Rnf-Nqr subunit, membrane protein PF02508 IPR003667
RNR_inhib Ribonucleotide reductase inhibitor PF08591 IPR013900
RNR_N Ribonucleotide reductase N-terminal PF08343 IPR013554
Robl_LC7 Roadblock/LC7 domain PF03259 IPR004942
Rod-binding Rod binding protein PF10135 IPR019301
Rod_C Rough deal protein C-terminal region PF10493 IPR019527
ROF Modulator of Rho-dependent transcription termination (ROF) PF07073 IPR009778
Rogdi_lz Rogdi leucine zipper containing protein PF10259
ROK ROK family PF00480 IPR000600
ROKNT ROKNT (NUC014) domain PF08067 IPR012987
RolB_RolC RolB/RolC glucosidase family PF02027 IPR006064
Root_cap Root cap PF06830 IPR009646
Rop Rop protein PF01815 IPR000769
Rossmann-like Rossmann-like domain PF10727 IPR019665
ROS_MUCR ROS/MUCR transcriptional regulator protein PF05443 IPR008807
Rot1 Chaperone for protein-folding within the ER, fungal PF10681 IPR019623
Rotamase PPIC-type PPIASE domain PF00639 IPR000297
Rotavirus_VP3 Rotavirus VP3 protein PF06929 IPR009697
Rotavirus_VP7 Rotavirus major outer capsid protein VP7 PF05868 IPR008818
Rota_Capsid_VP6 Rotavirus major capsid protein VP6 PF00980 IPR001385
Rota_NS26 Rotavirus NS26 PF01525 IPR002512
Rota_NS35 Rotavirus non-structural protein 35 PF02509 IPR003668
Rota_NS53 Rotavirus RNA-binding Protein 53 (NS53) PF00981 IPR002148
Rota_NS6 Rotavirus non-structural protein 6 PF04866 IPR006950
Rota_NSP3 Rotavirus non-structural protein NSP3 PF01665 IPR002873
Rota_NSP4 Rotavirus non structural protein PF01452 IPR002107
Rota_VP2 Rotavirus VP2 protein PF05087 IPR007779
Roughex Drosophila roughex protein PF06020 IPR009259
Rox3 Rox3 mediator complex subunit PF08633 IPR013942
RP-C Replication protein C PF03428 IPR005090
RPA Replication initiator protein A PF10134 IPR018777
RPAP1_C RPAP1-like, C-terminal PF08620 IPR013929
RPAP1_N RPAP1-like, N-terminal PF08621 IPR013930
RPAP2_Rtr1 Rtr1/RPAP2 family PF04181 IPR007308
RPA_C Replication protein A C terminal PF08784 IPR014892
RPE65 Retinal pigment epithelial membrane protein PF03055 IPR004294
RPEL RPEL repeat PF02755 IPR004018
RPH3A_effector Rabphilin-3A effector domain PF02318 IPR003315
RplB Rare lipoprotein B family PF04390 IPR007485
RPM2 Mitochondrial ribonuclease P subunit (RPM2) PF08579 IPR013888
Rpn3_C Proteasome regulatory subunit C-terminal PF08375 IPR013586
RPN7 26S proteasome subunit RPN7 PF10602 IPR019585
RpoE2 Archaeal DNA-directed RNA polymerase subunit E'' (RpoE'' or RpoE2) PF04035
Rpr2 RNAse P Rpr2/Rpp21/SNM1 subunit domain PF04032 IPR007175
RPW8 Arabidopsis broad-spectrum mildew resistance protein RPW8 PF05659 IPR008808
RQC RQC domain PF09382 IPR018982
RRF Ribosome recycling factor PF01765 IPR002661
Rrf2 Transcriptional regulator PF02082 IPR000944
RRM Putative RRM domain PF10378 IPR018835
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
RRM_2 RNA recognition motif 2 PF04059 IPR007201
RRM_3 RNA binding motif PF08777 IPR014886
RRM_4 RNA recognition motif of the spliceosomal PrP8 PF10598 IPR019582
RRN3 RNA polymerase I specific transcription initiation factor RRN3 PF05327 IPR007991
Rrn6 RNA polymerase I-specific transcription-initiation factor PF10214 IPR019350
RRN9 RNA polymerase I specific transcription initiation factor PF10680 IPR019622
RrnaAD Ribosomal RNA adenine dimethylase PF00398 IPR001737
rRNA_methylase Putative rRNA methylase PF06962 IPR010719
rRNA_processing rRNA processing PF08524 IPR013730
Rrp15p Rrp15p PF07890 IPR012459
RRS1 Ribosome biogenesis regulatory protein (RRS1) PF04939 IPR007023
RR_TM4-6 Ryanodine Receptor TM 4-6 PF06459 IPR009460
RS4NT RS4NT (NUC023) domain PF08071 IPR013843
Rsbr_N Rsbr N terminal PF08678 IPR014792
RsbU_N Phosphoserine phosphatase RsbU, N-terminal domain PF08673 IPR014787
Rsc14 RSC complex, Rsc14/Ldb7 subunit PF08586 IPR013895
RSD-2 RSD-2 N-terminal domain PF07547 IPR011508
Rsd_AlgQ Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PF04353 IPR007448
RseA_C Anti sigma-E protein RseA, C-terminal domain PF03873 IPR005573
RseA_N Anti sigma-E protein RseA, N-terminal domain PF03872 IPR005572
RseC_MucC Positive regulator of sigma(E), RseC/MucC PF04246 IPR007359
Rsm1 Rsm1-like PF08600 IPR013909
Rsm22 Mitochondrial small ribosomal subunit Rsm22 PF09243 IPR015324
RSV_NS2 Respiratory synctial virus non-structural protein NS2 PF03113 IPR004336
RTA1 RTA1 like protein PF04479 IPR007568
RTBV_P12 Rice tungro bacilliform virus P12 protein PF06361 IPR009417
RTBV_P46 Rice tungro bacilliform virus P46 protein PF06216 IPR009347
RTC RNA 3'-terminal phosphate cyclase PF01137 IPR000228
RtcR Regulator of RNA terminal phosphate cyclase PF06956 IPR009715
RTC_insert RNA 3'-terminal phosphate cyclase (RTC), insert domain PF05189 IPR013796
RteC RteC protein PF09357 IPR018534
RTP Replication terminator protein PF02334 IPR003432
RTP801_C RTP801 C-terminal region PF07809 IPR012918
Rtt102p Rtt102p-like transcription regulator protein PF09510 IPR018304
Rtt106 Histone chaperone Rttp106-like PF08512 IPR013719
RTX RTX N-terminal domain PF02382 IPR018504
RtxA RtxA repeat PF07634 IPR011509
RTX_C RTX C-terminal domain PF08339 IPR013550
Rubella_Capsid Rubella capsid protein PF05750 IPR008819
Rubella_E1 Rubella membrane glycoprotein E1 PF05748 IPR008820
Rubella_E2 Rubella membrane glycoprotein E2 PF05749 IPR008821
Rubis-subs-bind Rubisco LSMT substrate-binding PF09273 IPR015353
RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain PF00016 IPR000685
RuBisCO_large_N Ribulose bisphosphate carboxylase large chain, N-terminal domain PF02788 IPR017444
RuBisCO_small Ribulose bisphosphate carboxylase, small chain PF00101 IPR000894
Rubredoxin Rubredoxin PF00301 IPR004039
Rubrerythrin Rubrerythrin PF02915 IPR003251
RUN RUN domain PF02759 IPR004012
Runt Runt domain PF00853 IPR013524
RunxI Runx inhibition domain PF08504 IPR013711
RusA Endodeoxyribonuclease RusA PF05866 IPR008822
RuvA_C RuvA, C-terminal domain PF07499 IPR011114
RuvA_N RuvA N terminal domain PF01330 IPR013849
RuvB_C Holliday junction DNA helicase ruvB C-terminus PF05491 IPR008823
RuvB_N Holliday junction DNA helicase ruvB N-terminus PF05496 IPR008824
RuvC Crossover junction endodeoxyribonuclease RuvC PF02075 IPR002176
rve Integrase core domain PF00665 IPR001584
RVP Retroviral aspartyl protease PF00077 IPR018061
RVP_2 Retroviral aspartyl protease PF08284 IPR013242
RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) PF00078 IPR000477
RVT_2 Reverse transcriptase (RNA-dependent DNA polymerase) PF07727 IPR013103
RVT_connect Reverse transcriptase connection domain PF06815 IPR010659
RVT_thumb Reverse transcriptase thumb domain PF06817 IPR010661
RWD RWD domain PF05773 IPR006575
RWP-RK RWP-RK domain PF02042 IPR003035
RXT2_N RXT2-like, N-terminal PF08595 IPR013904
Rxt3 Histone deacetylation protein Rxt3 PF08642 IPR013951
RYDR_ITPR RIH domain PF01365 IPR000699
RyR RyR domain PF02026 IPR003032
Rz1 Lipoprotein Rz1 precursor PF06085 IPR010346
R_equi_Vir Rhodococcus equi virulence-associated protein PF05526 IPR008810
S-AdoMet_synt_C S-adenosylmethionine synthetase, C-terminal domain PF02773 IPR022630
S-AdoMet_synt_M S-adenosylmethionine synthetase, central domain PF02772 IPR022629
S-AdoMet_synt_N S-adenosylmethionine synthetase, N-terminal domain PF00438 IPR022628
S-antigen S-antigen protein PF05756
S-methyl_trans Homocysteine S-methyltransferase PF02574 IPR003726
S1 S1 RNA binding domain PF00575 IPR003029
S1-P1_nuclease S1/P1 Nuclease PF02265 IPR003154
S10_plectin Plectin/S10 domain PF03501 IPR005326
S19 Chorion protein S19 C-terminal PF06756 IPR009611
S1FA DNA binding protein S1FA PF04689 IPR006779
S4 S4 domain PF01479 IPR002942
s48_45 Sexual stage antigen s48/45 domain PF07422 IPR010884
S6PP Sucrose-6F-phosphate phosphohydrolase PF05116 IPR006380
S6PP_C Sucrose-6-phosphate phosphohydrolase C-terminal PF08472 IPR013679
SAA Serum amyloid A protein PF00277 IPR000096
SAB SAB domain PF04382 IPR007477
SAC3_GANP SAC3/GANP/Nin1/mts3/eIF-3 p25 family PF03399 IPR005062
Saccharop_dh Saccharopine dehydrogenase PF03435 IPR005097
Saccharop_dh_N LOR/SDH bifunctional enzyme conserved region PF04455 IPR007545
Sad1_UNC Sad1 / UNC-like C-terminal PF07738 IPR012919
SAE2 DNA repair protein SAE2/CtIP PF08573 IPR013882
SAF SAF domain PF08666 IPR013974
Saf-Nte_pilin Saf-pilin pilus formation protein PF09460 IPR018569
SAFF SAFF domain PF10291 IPR018808
SAG SRS domain PF04092 IPR007226
SAICAR_synt SAICAR synthetase PF01259 IPR001636
Sak_Polo Sak polo-box PF09024
Salt_tol_Pase Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) PF09506 IPR012765
SAMP SAMP Motif PF05924 IPR009224
SAM_1 SAM domain (Sterile alpha motif) PF00536 IPR021129
SAM_2 SAM domain (Sterile alpha motif) PF07647 IPR011510
SAM_decarbox Adenosylmethionine decarboxylase PF01536 IPR001985
SAM_PNT Sterile alpha motif (SAM)/Pointed domain PF02198 IPR003118
SAND SAND domain PF01342 IPR000770
SANTA SANTA (SANT Associated) PF09133 IPR015216
SAP SAP domain PF02037 IPR003034
SAP18 Sin3 associated polypeptide p18 (SAP18) PF06487 IPR010516
SapA Saposin A-type domain PF02199 IPR003119
SapB_1 Saposin-like type B, region 1 PF05184 IPR007856
SapB_2 Saposin-like type B, region 2 PF03489 IPR008138
SapC SapC PF07277 IPR010836
SAPS SIT4 phosphatase-associated protein PF04499 IPR007587
Sar8_2 Sar8.2 family PF03058 IPR004297
Sarcoglycan_1 Sarcoglycan complex subunit protein PF04790 IPR006875
Sarcoglycan_2 Sarcoglycan alpha/epsilon PF05510 IPR008908
Sarcolipin Sarcolipin PF05366 IPR008028
SARS_lipid_bind SARS lipid binding protein PF09399 IPR018542
SARS_X4 SARS coronavirus X4 like PF08779 IPR014888
SART-1 SART-1 family PF03343 IPR005011
Sas10_Utp3 Sas10/Utp3/C1D family PF04000 IPR007146
Sas10_Utp3_C Sas10 C-terminal domain PF09368 IPR018972
SASP Small, acid-soluble spore proteins, alpha/beta type PF00269 IPR001448
SASP_gamma Small, acid-soluble spore protein, gamma-type PF04259 IPR006341
SATase_N Serine acetyltransferase, N-terminal PF06426 IPR010493
SAYSvFN Uncharacterized conserved domain (SAYSvFN) PF10260 IPR019387
SBBP Beta-propeller repeat PF06739 IPR010620
SBDS Shwachman-Bodian-Diamond syndrome (SBDS) protein PF01172 IPR019783
SBDS_C SBDS protein C-terminal domain PF09377 IPR018978
SBF Sodium Bile acid symporter family PF01758 IPR002657
SbmA_BacA SbmA/BacA-like family PF05992 IPR009248
SBP SBP domain PF03110 IPR004333
SBP56 56kDa selenium binding protein (SBP56) PF05694 IPR008826
SBP_bac_1 Bacterial extracellular solute-binding protein PF01547 IPR006059
SBP_bac_10 Protein of unknown function (DUF1559) PF07596 IPR011453
SBP_bac_3 Bacterial extracellular solute-binding proteins, family 3 PF00497 IPR001638
SBP_bac_5 Bacterial extracellular solute-binding proteins, family 5 Middle PF00496 IPR000914
SBP_bac_7 Bacterial extracellular solute-binding protein, family 7 PF03480 IPR018389
SBP_bac_9 Periplasmic solute binding protein family PF01297 IPR006127
SCA7 SCA7 PF08313 IPR013243
scADH Short-chain alcohol dehydrogenase PF07055 IPR010758
SCAMP SCAMP family PF04144 IPR007273
SCAN SCAN domain PF02023 IPR003309
ScdA_N Domain of Unknown function (DUF542) PF04405 IPR007500
SCF Stem cell factor PF02404 IPR003452
SCFA_trans Short chain fatty acid transporter PF02667 IPR006160
SchA_CurD SchA / CurD like protein PF04486 IPR007575
SCHIP-1 Schwannomin-interacting protein 1 PF10148 IPR015649
Sclerostin Sclerostin (SOST) PF05463 IPR008835
Scm3 Centromere protein Scm3 PF10384 IPR018465
SCO1-SenC SCO1/SenC PF02630 IPR003782
SCP SCP-like extracellular protein PF00188 IPR014044
SCP-1 Synaptonemal complex protein 1 (SCP-1) PF05483 IPR008827
SCP2 SCP-2 sterol transfer family PF02036 IPR003033
ScpA_ScpB ScpA/B protein PF02616 IPR003768
SCPU Spore Coat Protein U domain PF05229 IPR007893
Scramblase Scramblase PF03803 IPR005552
SCRL Plant self-incompatibility response (SCRL) protein PF06876 IPR010682
Scs3p Inositol phospholipid synthesis protein Scs3p PF10261 IPR019388
Scytalone_dh Scytalone dehydratase PF02982 IPR004235
Sda Sporulation inhibitor A PF08970 IPR015064
SDA1 SDA1 PF05285 IPR007949
SDF Sodium:dicarboxylate symporter family PF00375 IPR001991
SDH_alpha Serine dehydratase alpha chain PF03313 IPR005130
SDH_beta Serine dehydratase beta chain PF03315 IPR005131
Sdh_cyt Succinate dehydrogenase cytochrome b subunit PF01127 IPR000701
SdiA-regulated SdiA-regulated PF06977 IPR009722
SdrG_C_C C-terminus of bacterial fibrinogen-binding adhesin PF10425 IPR011266
Sds3 Sds3-like PF08598 IPR013907
SE Squalene epoxidase PF08491 IPR013698
SEA SEA domain PF01390 IPR000082
Seadorna_Vp10 Seadornavirus Vp10 PF07322 IPR009930
Seadorna_VP6 Seadornavirus VP6 protein PF07407 IPR009982
Seadorna_VP7 Seadornavirus VP7 PF07387 IPR009973
SEC-C SEC-C motif PF02810 IPR004027
Sec1 Sec1 family PF00995 IPR001619
Sec10 Exocyst complex component Sec10 PF07393 IPR009976
Sec15 Exocyst complex subunit Sec15-like PF04091 IPR007225
Sec20 Sec20 PF03908 IPR005606
Sec23_BS Sec23/Sec24 beta-sandwich domain PF08033 IPR012990
Sec23_helical Sec23/Sec24 helical domain PF04815 IPR006900
Sec23_trunk Sec23/Sec24 trunk domain PF04811 IPR006896
Sec2p GDP/GTP exchange factor Sec2p PF06428 IPR009449
Sec3 Exocyst complex component Sec3 PF09763 IPR019160
Sec34 Sec34-like family PF04136 IPR007265
Sec39 Secretory pathway protein Sec39 PF08314 IPR013244
Sec6 Exocyst complex component Sec6 PF06046 IPR010326
Sec61_beta Sec61beta family PF03911 IPR005609
Sec62 Translocation protein Sec62 PF03839 IPR004728
Sec63 Sec63 Brl domain PF02889 IPR004179
Sec66 Preprotein translocase subunit Sec66 PF09802 IPR018624
Sec7 Sec7 domain PF01369 IPR000904
Sec8_exocyst Sec8 exocyst complex component specific domain PF04048 IPR007191
SecA_DEAD SecA DEAD-like domain PF07517 IPR011115
SecA_PP_bind SecA preprotein cross-linking domain PF01043 IPR011130
SecA_SW SecA Wing and Scaffold domain PF07516 IPR011116
SecB Preprotein translocase subunit SecB PF02556 IPR003708
SecD_SecF Protein export membrane protein PF02355 IPR022645
SecE SecE/Sec61-gamma subunits of protein translocation complex PF00584 IPR001901
SecG Preprotein translocase SecG subunit PF03840 IPR004692
SecIII_SopE_N Salmonella type III secretion SopE effector N-terminus PF05364 IPR016018
SecM Secretion monitor precursor protein (SecM) PF06558 IPR009502
Secretin Bacterial type II and III secretion system protein PF00263 IPR004846
Secretin_N Bacterial type II/III secretion system short domain PF03958 IPR005644
Secretin_N_2 Secretin N-terminal domain PF07655 IPR011514
Secretogranin_V Neuroendocrine protein 7B2 precursor (Secretogranin V) PF05281 IPR007945
Securin Securin sister-chromatid separation inhibitor PF04856 IPR006940
SecY eubacterial secY protein PF00344 IPR002208
Sec_GG SecD/SecF GG Motif PF07549 IPR022646
Sedlin_N Sedlin, N-terminal conserved region PF04628 IPR006722
SEF14_adhesin SEF14-like adhesin PF06443 IPR010498
SEFIR SEFIR domain PF08357 IPR013568
Seipin Putative adipose-regulatory protein (Seipin) PF06775 IPR009617
Sel1 Sel1 repeat PF08238 IPR006597
SelA L-seryl-tRNA selenium transferase PF03841 IPR018319
SelB-wing_1 Elongation factor SelB, winged helix PF09105 IPR015189
SelB-wing_2 Elongation factor SelB, winged helix PF09106 IPR015190
SelB-wing_3 Elongation factor SelB, winged helix PF09107 IPR015191
Selenoprotein_S Selenoprotein S (SelS) PF06936 IPR009703
Seleno_W_rel Selenoprotein W-related family PF05169
Self-incomp_S1 Plant self-incompatibility protein S1 PF05938 IPR010264
SelP_C Selenoprotein P, C terminal region PF04593 IPR007672
SelP_N Selenoprotein P, N terminal region PF04592 IPR007671
SelR SelR domain PF01641 IPR002579
SelT Selenoprotein T PF10262 IPR011893
Sema Sema domain PF01403 IPR001627
Semenogelin Semenogelin PF05474 IPR008836
Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain PF01118 IPR000534
Semialdhyde_dhC Semialdehyde dehydrogenase, dimerisation domain PF02774 IPR012280
Sen15 Sen15 protein PF09631 IPR018593
Senescence Senescence-associated protein PF06911 IPR009686
SEP SEP domain PF08059 IPR012989
Sep15_SelM Sep15/SelM redox domain PF08806 IPR014912
SepL_SsaL SepL/SsaL protein PF07018
SepQ SepQ protein PF06622 IPR009532
Septin Septin PF00735 IPR000038
SepZ SepZ PF06066 IPR009275
SeqA SeqA protein PF03925 IPR005621
Serendipity_A Serendipity locus alpha protein (SRY-A) PF05482 IPR008837
Serglycin Serglycin PF04360 IPR007455
SerH Cell surface immobilisation antigen SerH PF06873 IPR009670
Serinc Serine incorporator (Serinc) PF03348 IPR005016
Serine_rich Serine rich protein interaction domain PF08824 IPR014928
Serpentine_r_xa Caenorhabditis serpentine receptor-like protein, class xa PF03383 IPR005047
Serpin Serpin (serine protease inhibitor) PF00079 IPR000215
Serpulina_VSP Serpulina hyodysenteriae variable surface protein PF05540 IPR008838
SERTA SERTA motif PF06031 IPR009263
Serum_albumin Serum albumin family PF00273 IPR014760
Seryl_tRNA_N Seryl-tRNA synthetase N-terminal domain PF02403 IPR015866
SET SET domain PF00856 IPR001214
Sex_peptide Sex peptide (SP) family PF08138 IPR012608
SF-assemblin SF-assemblin/beta giardin PF06705
SF3b1 Splicing factor 3B subunit 1 PF08920 IPR015016
SF3b10 Splicing factor 3B subunit 10 (SF3b10) PF07189 IPR009846
Sfi1 Sfi1 spindle body protein PF08457 IPR013665
Sfi1_C Spindle body associated protein C-terminus PF10638 IPR018907
SfsA Sugar fermentation stimulation protein PF03749 IPR005224
SFT2 SFT2-like protein PF07770
SgaT_UlaA Putative sugar-specific permease, SgaT/UlaA PF04215
Sgf11 Sgf11 (transcriptional regulation protein) PF08209 IPR013246
SGL SMP-30/Gluconolaconase/LRE-like region PF08450 IPR013658
SGS SGS domain PF05002 IPR007699
SGT1 SGT1 protein PF07093 IPR010770
SH Viral small hydrophobic protein PF01445 IPR001477
SH2 SH2 domain PF00017 IPR000980
SH3BGR SH3-binding, glutamic acid-rich protein PF04908 IPR006993
SH3BP5 SH3 domain-binding protein 5 (SH3BP5) PF05276 IPR007940
SH3_1 SH3 domain PF00018 IPR001452
SH3_2 Variant SH3 domain PF07653 IPR011511
SH3_3 Bacterial SH3 domain PF08239 IPR013247
SH3_4 Bacterial SH3 domain PF06347 IPR010466
SH3_5 Bacterial SH3 domain PF08460 IPR013667
SHD1 SLA1 homology domain 1, SHD1 PF03983 IPR007131
She9_MDM33 She9 / Mdm33 family PF05546 IPR008839
Shigella_OspC Shigella flexneri OspC protein PF06128 IPR010366
Shikimate_DH Shikimate / quinate 5-dehydrogenase PF01488 IPR006151
Shikimate_dh_N Shikimate dehydrogenase substrate binding domain PF08501 IPR013708
ShK ShK domain-like PF01549 IPR003582
ShlB Haemolysin secretion/activation protein ShlB/FhaC/HecB PF03865 IPR005565
SHMT Serine hydroxymethyltransferase PF00464 IPR001085
SHNi-TPR SHNi-TPR PF10516 IPR019544
SHP Small hydrophobic protein PF03579 IPR005327
SHQ1 SHQ1 protein PF04925 IPR007009
SHR3_chaperone ER membrane protein SH3 PF08229 IPR013248
Shufflon_N Bacterial shufflon protein, N-terminal constant region PF04917 IPR007001
Shugoshin_C Shugoshin C terminus PF07557 IPR011515
Shugoshin_N N-terminal coiled-coil region of kinetochore-attachment protein PF07558 IPR011516
Siah-Interact_N Siah interacting protein, N terminal PF09032 IPR015120
Sial-lect-inser Vibrio cholerae sialidase, lectin insertion PF09264 IPR015344
Sialidase Sialidase, N-terminal domain PF02973 IPR004124
SIC sic protein PF03482 IPR005328
SicP-binding SicP binding PF09119 IPR015203
Sif Sif protein PF06767 IPR010637
Sigma54_activat Sigma-54 interaction domain PF00158 IPR002078
Sigma54_AID Sigma-54 factor, Activator interacting domain (AID) PF00309 IPR000394
Sigma54_CBD Sigma-54 factor, core binding domain PF04963 IPR007046
Sigma54_DBD Sigma-54, DNA binding domain PF04552 IPR007634
Sigma70_ECF ECF sigma factor PF07638
Sigma70_ner Sigma-70, non-essential region PF04546 IPR007631
Sigma70_r1_1 Sigma-70 factor, region 1.1 PF03979 IPR007127
Sigma70_r1_2 Sigma-70 factor, region 1.2 PF00140 IPR009042
Sigma70_r2 Sigma-70 region 2 PF04542 IPR007627
Sigma70_r3 Sigma-70 region 3 PF04539 IPR007624
Sigma70_r4 Sigma-70, region 4 PF04545 IPR007630
Sigma70_r4_2 Sigma-70, region 4 PF08281 IPR013249
Sigma_1s Sigma 1s protein PF02454 IPR003478
Sigma_1_2 Reoviral Sigma1/Sigma2 family PF03084 IPR004317
Silic_transp Silicon transporter PF03842 IPR004693
SIM_C Single-minded protein C-terminus PF06621 IPR010578
SIN1 Stress-activated map kinase interacting protein 1 (SIN1) PF05422 IPR008828
Sina Seven in absentia protein family PF03145 IPR018121
SinI Anti-repressor SinI PF08671 IPR010981
Sin_N Sin-like protein conserved region PF04801
SIP Siderophore-interacting protein PF04954 IPR007037
SIP1 Survival motor neuron (SMN) interacting protein 1 (SIP1) PF04938
SipA Salmonella invasion protein A PF09052 IPR015138
Sipho_Gp157 Siphovirus Gp157 PF05565 IPR008840
Sipho_tail Siphovirus tail component protein PF05709 IPR008841
SIR2 Sir2 family PF02146 IPR003000
SirA SirA-like protein PF01206 IPR001455
SirB Invasion gene expression up-regulator, SirB PF04247 IPR007360
SIS SIS domain PF01380 IPR001347
Siva Cd27 binding protein (Siva) PF05458
SKG6 Transmembrane alpha-helix domain PF08693 IPR014805
SKI Shikimate kinase PF01202 IPR000623
SKIP_SNW SKIP/SNW domain PF02731 IPR004015
Ski_Sno SKI/SNO/DAC family PF02437 IPR003380
Sklp_toxin Streptomyces killer toxin-like PF09076 IPR015161
SKN1 Beta-glucan synthesis-associated protein (SKN1) PF03935 IPR005629
Skp1 Skp1 family, dimerisation domain PF01466 IPR016072
Skp1_POZ Skp1 family, tetramerisation domain PF03931 IPR016073
SK_channel Calcium-activated SK potassium channel PF03530 IPR011996
SLAM Signaling lymphocytic activation molecule (SLAM) protein PF06214 IPR010407
SLAP Bacterial surface layer protein PF03217 IPR004903
SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) PF05889 IPR008829
SLBB SLBB domain PF10531 IPR019554
SLD3 DNA replication regulator SLD3 PF08639 IPR013948
Sld5 Synthetic lethal mutants of dpb11-1 five PF05916 IPR021151
SLEI_Leptospira SLEI PF07620 IPR011512
SLH S-layer homology domain PF00395 IPR001119
SLIDE SLIDE PF09111 IPR015195
Slp Outer membrane lipoprotein Slp family PF03843 IPR004658
SLR1-BP S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) PF07333 IPR010851
SLT Transglycosylase SLT domain PF01464 IPR008258
SLT_beta Shiga-like toxin beta subunit PF02258 IPR003189
Slx4 Slx4 endonuclease PF09494 IPR018574
SlyX SlyX PF04102 IPR007236
Smac_DIABLO Second Mitochondria-derived Activator of Caspases PF09057 IPR015142
SMC_hinge SMC proteins Flexible Hinge Domain PF06470 IPR010935
SMC_N RecF/RecN/SMC N terminal domain PF02463 IPR003395
SMC_Nse1 Nse1 non-SMC component of SMC5-6 complex PF07574 IPR011513
Smg4_UPF3 Smg-4/UPF3 family PF03467 IPR005120
SMI1_KNR4 SMI1 / KNR4 family PF09346 IPR018958
SMN Survival motor neuron protein (SMN) PF06003 IPR010304
SMP Seed maturation protein PF04927 IPR007011
SmpA_OmlA SmpA / OmlA family PF04355 IPR007450
SmpB SmpB protein PF01668 IPR000037
SMP_2 Bacterial virulence factor haemolysin PF10144 IPR019305
Smr Smr domain PF01713 IPR002625
Sm_multidrug_ex Putative small multi-drug export protein PF06695 IPR009577
SNAP-25 SNAP-25 family PF00835 IPR000928
SNAPc_SNAP43 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 PF09808
SNARE SNARE domain PF05739 IPR000727
SNARE_assoc SNARE associated Golgi protein PF09335 IPR015414
SNase Staphylococcal nuclease homologue PF00565 IPR006021
SNF Sodium:neurotransmitter symporter family PF00209 IPR000175
SNF2_assoc Bacterial SNF2 helicase associated PF08455 IPR013663
SNF2_N SNF2 family N-terminal domain PF00176 IPR000330
SNF5 SNF5 / SMARCB1 / INI1 PF04855 IPR006939
Snf7 Snf7 PF03357 IPR005024
SNN_cytoplasm Stannin cytoplasmic PF09051 IPR015137
SNN_linker Stannin unstructured linker PF09050 IPR015136
SNN_transmemb Stannin transmembrane PF09049 IPR015135
SNO SNO glutamine amidotransferase family PF01174 IPR002161
SnoaL SnoaL-like polyketide cyclase PF07366 IPR009959
SNURF SNURF/RPN4 protein PF07192 IPR009847
SOCS_box SOCS box PF07525 IPR001496
Sod_Cu Copper/zinc superoxide dismutase (SODC) PF00080 IPR001424
Sod_Fe_C Iron/manganese superoxide dismutases, C-terminal domain PF02777 IPR019832
Sod_Fe_N Iron/manganese superoxide dismutases, alpha-hairpin domain PF00081 IPR019831
Sod_Ni Nickel-containing superoxide dismutase PF09055 IPR014123
Sof1 Sof1-like domain PF04158 IPR007287
SOG2 RAM signalling pathway protein PF10428 IPR019487
SOH1 SOH1 PF05669 IPR008831
Somatomedin_B Somatomedin B domain PF01033 IPR001212
Somatostatin Somatostatin/Cortistatin family PF03002 IPR018142
SopE_GEF SopE GEF domain PF07487 IPR016019
SOR Sulphur oxygenase reductase PF07682 IPR011661
Sorb Sorbin homologous domain PF02208 IPR003127
Sororin Sororin protein PF09666 IPR018605
Sortase Sortase family PF04203 IPR005754
Sorting_nexin Sorting nexin, N-terminal domain PF03700 IPR005329
SOR_SNZ SOR/SNZ family PF01680 IPR001852
SOUL SOUL heme-binding protein PF04832 IPR006917
SoxD Sarcosine oxidase, delta subunit family PF04267 IPR006279
SoxE Sulfocyanin (SoxE) PF06525 IPR010532
SoxG Sarcosine oxidase, gamma subunit family PF04268 IPR007375
SoxZ Sulphur oxidation protein SoxZ PF08770 IPR014880
Sp100 Sp100 domain PF03172 IPR004865
SP2 Structural protein 2 PF03014 IPR004261
Sp38 Zona-pellucida-binding protein (Sp38) PF07354 IPR010857
SPAM Salmonella surface presentation of antigen gene type M protein PF02090
SPAN Surface presentation of antigens protein PF02510 IPR003066
SPAN-X Sperm protein associated with nucleus, mapped to X chromosome (SPAN-X) PF07458 IPR010007
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region PF10591
Spb1_C Spb1 C-terminal domain PF07780 IPR012920
SPB_interacting Spindle pole body interacting protein PF08616
SPC12 Microsomal signal peptidase 12 kDa subunit (SPC12) PF06645 IPR009542
SPC22 Signal peptidase subunit PF04573 IPR007653
Spc24 Spc24 subunit of Ndc80 PF08286 IPR013252
SPC25 Microsomal signal peptidase 25 kDa subunit (SPC25) PF06703 IPR009582
Spc7 Spc7 kinetochore protein PF08317 IPR013253
Spc97_Spc98 Spc97 / Spc98 family PF04130 IPR007259
SpdB Mobile element transfer protein PF05122 IPR007806
SPDY Domain of unknown function (DUF317) PF03771 IPR005523
SpecificRecomb Site-specific recombinase PF10136 IPR011385
Spectrin Spectrin repeat PF00435 IPR002017
Spermine_synth Spermine/spermidine synthase PF01564 IPR001045
Sperm_act_pep Sperm-activating peptides PF08250 IPR013254
Sperm_Ag_HE2 Sperm antigen HE2 PF05324 IPR007988
Spheroidin Entomopoxvirus spheroidin protein PF05541 IPR008843
Spike_rec_bind Spike receptor binding domain PF09408 IPR018548
Spin-Ssty Spin/Ssty Family PF02513 IPR003671
Spindle_Spc25 Chromosome segregation protein (Spc25, Csm1, Pcs1) PF08234 IPR013255
Spiralin Spiralin PF05215 IPR007880
SPK Domain of unknown function (DUF545) PF04435 IPR006570
Spo0A_C Sporulation initiation factor Spo0A C terminal PF08769 IPR014879
Spo0M SpoOM protein PF07070 IPR009776
SPO11_like SPO11 homologue PF03533 IPR004084
Spo12 Spo12 family PF05032 IPR007727
SPO22 Meiosis protein SPO22/ZIP4 like PF08631 IPR013940
Spo7 Spo7-like protein PF03907 IPR005605
SpoA Surface presentation of antigens (SPOA) PF01052 IPR001543
SPOC SPOC domain PF07744 IPR012921
SpoIID Stage II sporulation protein PF08486 IPR013693
SpoIIE Stage II sporulation protein E (SpoIIE) PF07228 IPR010822
SpoIIIAC Stage III sporulation protein AC (SpoIIIAC) PF06686
SpoIIP Stage II sporulation protein P (SpoIIP) PF07454 IPR010897
Spond_N Spondin_N PF06468
SpoOE-like Spo0E like sporulation regulatory protein PF09388 IPR018540
SPOR Sporulation related domain PF05036 IPR007730
Spore-coat_CotZ Spore coat protein Z PF10612 IPR019593
Spore_GerAC Spore germination B3/ GerAC like, C-terminal PF05504 IPR008844
Spore_GerQ Spore coat protein (Spore_GerQ) PF09671 IPR014099
Spore_III_AB Stage III sporulation protein AB (spore_III_AB) PF09548 IPR014198
Spore_III_AD Stage III sporulation protein AD (spore_III_AD) PF09555
Spore_III_AE Stage III sporulation protein AE (spore_III_AE) PF09546 IPR014194
Spore_III_AF Stage III sporulation protein AF (Spore_III_AF) PF09581 IPR014245
Spore_II_R Stage II sporulation protein R (spore_II_R) PF09551 IPR014202
Spore_IV_A Stage IV sporulation protein A (spore_IV_A) PF09547 IPR014201
Spore_permease Spore germination protein PF03845 IPR004761
Spore_SspJ Small spore protein J (Spore_SspJ) PF09575 IPR014220
Spore_YabQ Spore cortex protein YabQ (Spore_YabQ) PF09578 IPR019074
Spore_YhcN_YlaJ Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) PF09580 IPR019076
Spore_YpjB Sporulation protein YpjB (SpoYpjB) PF09577 IPR014231
Spore_YtfJ Sporulation protein YtfJ (Spore_YtfJ) PF09579 IPR014229
Spore_YunB Sporulation protein YunB (Spo_YunB) PF09560 IPR019061
Sporozoite_P67 Sporozoite P67 surface antigen PF05642 IPR008845
Spot_14 Thyroid hormone-inducible hepatic protein Spot 14 PF07084
SPOUT_MTase Predicted SPOUT methyltransferase PF02590 IPR003742
SpoU_methylase SpoU rRNA Methylase family PF00588 IPR001537
SpoU_sub_bind RNA 2'-O ribose methyltransferase substrate binding PF08032 IPR013123
SpoV Stage V sporulation protein family PF08183 IPR012609
SpoVA SpoVA protein PF03862 IPR005562
SpoVAD Stage V sporulation protein AD (SpoVAD) PF07451 IPR010894
SpoVG SpoVG PF04026 IPR007170
SpoVR SpoVR like protein PF04293 IPR007390
SpoVS Stage V sporulation protein S (SpoVS) PF04232 IPR007347
SpoVT_AbrB SpoVT / AbrB like domain PF04014 IPR007159
Spp-24 Secreted phosphoprotein 24 (Spp-24) PF07448 IPR010892
Sprouty Sprouty protein (Spry) PF05210 IPR007875
SprT-like Uncharacterized conserved protein (SprT-like) PF10263 IPR006640
SPRY SPRY domain PF00622 IPR003877
SPT16 FACT complex subunit (SPT16/CDC68) PF08644 IPR013953
SPT2 SPT2 chromatin protein PF08243 IPR013256
Spt4 Transcription elongation protein Spt4 PF06093
Spuma_A9PTase Spumavirus aspartic protease (A9) PF03539 IPR001641
SpvB Salmonella virulence plasmid 65kDa B protein PF03534
SpvD Salmonella plasmid virulence protein SpvD PF05563 IPR008834
SPW SPW repeat PF03779 IPR005530
SPX SPX domain PF03105 IPR004331
SP_C-Propep Surfactant protein C, N terminal propeptide PF08999 IPR015091
SQS_PSY Squalene/phytoene synthase PF00494 IPR002060
Squash Squash family serine protease inhibitor PF00299 IPR000737
SR-25 Nuclear RNA-splicing-associated protein PF10500 IPR019532
SRA1 Steroid receptor RNA activator (SRA1) PF07304
SRC-1 Steroid receptor coactivator PF08832 IPR014935
SRCR Scavenger receptor cysteine-rich domain PF00530 IPR001190
Sre C. elegans Sre G protein-coupled chemoreceptor PF03125 IPR004151
SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain) PF00319 IPR002100
SrfB Virulence factor SrfB PF07520 IPR009216
Srg Srg family chemoreceptor PF02118 IPR000609
SRI SRI (Set2 Rpb1 interacting) domain PF08236 IPR013257
SRI_2 Set2-Rpb1 interacting PF09031
SRP-alpha_N Signal recognition particle, alpha subunit, N-terminal PF04086 IPR007222
SRP14 Signal recognition particle 14kD protein PF02290 IPR003210
SRP19 SRP19 protein PF01922 IPR002778
SRP1_TIP1 Seripauperin and TIP1 family PF00660 IPR000992
SRP40_C SRP40, C-terminal domain PF05022 IPR007718
SRP54 SRP54-type protein, GTPase domain PF00448 IPR000897
SRP54_N SRP54-type protein, helical bundle domain PF02881 IPR013822
SRP72 SRP72 RNA-binding domain PF08492 IPR013699
SRP9 Signal recognition particle 9 kDa protein (SRP9) PF05486 IPR008832
SRPRB Signal recognition particle receptor beta subunit PF09439 IPR019009
SRP_SPB Signal peptide binding domain PF02978 IPR004125
SRR Seven Residue Repeat PF07709 IPR011714
SRR1 SRR1 PF07985 IPR012942
SRX SRX PF09201 IPR015284
SSB Single-strand binding protein family PF00436 IPR000424
ssDNA-exonuc_C Single-strand DNA-specific exonuclease, C terminal domain PF10141 IPR018779
SSDP Single-stranded DNA binding protein, SSDP PF04503 IPR007591
SseB SseB protein PF07179 IPR009839
SseC Secretion system effector C (SseC) like family PF04888 IPR006972
SSF Sodium:solute symporter family PF00474 IPR001734
SsgA Streptomyces sporulation and cell division protein, SsgA PF04686 IPR006776
SSI Subtilisin inhibitor-like PF00720 IPR000691
SSIII Starch synthase III PF07036
Ssl1 Ssl1-like PF04056 IPR007198
SSP160 Special lobe-specific silk protein SSP160 PF06933 IPR009701
SspB Stringent starvation protein B PF04386 IPR007481
SspH Small acid-soluble spore protein H family PF08141 IPR012610
SspK Small acid-soluble spore protein K family PF08176 IPR012611
SspN Small acid-soluble spore protein N family PF08177 IPR012612
SspO Small acid-soluble spore protein O family PF08175 IPR012613
SspP Small acid-soluble spore protein P family PF08179 IPR012614
SSrecog Structure-specific recognition protein (SSRP1) PF03531 IPR000969
Ssu72 Ssu72-like protein PF04722 IPR006811
SSV1_ORF_D-335 ORF D-335-like protein PF07935 IPR012922
SSXRD SSXRD motif PF09514 IPR019041
SSXT SSXT protein (N-terminal region) PF05030 IPR007726
ST7 ST7 protein PF04184 IPR007311
STAG STAG domain PF08514 IPR013721
Stanniocalcin Stanniocalcin family PF03298 IPR004978
Staphostatin_A Staphostatin A PF09022 IPR015112
Staphostatin_B Staphostatin B PF09023 IPR015113
Staphylcoagulse Staphylocoagulase repeat PF04022 IPR001443
Staphylokinase Staphylokinase/Streptokinase family PF02821 IPR004093
Staph_haemo Staphylococcus haemolytic protein PF05480 IPR008846
Stap_Strp_toxin Staphylococcal/Streptococcal toxin, OB-fold domain PF01123 IPR006173
Stap_Strp_tox_C Staphylococcal/Streptococcal toxin, beta-grasp domain PF02876 IPR006123
START START domain PF01852 IPR002913
STAS STAS domain PF01740 IPR002645
Statherin Statherin PF03875 IPR005575
Stathmin Stathmin family PF00836 IPR000956
STAT_alpha STAT protein, all-alpha domain PF01017 IPR013800
STAT_bind STAT protein, DNA binding domain PF02864 IPR013801
STAT_int STAT protein, protein interaction domain PF02865 IPR013799
Stb3 Putative Sin3 binding protein PF10330 IPR018818
StbA StbA protein PF06406 IPR009440
STb_secrete Heat-stable enterotoxin B, secretory PF09075 IPR015160
STE STE like transcription factor PF02200 IPR003120
STE2 Fungal pheromone mating factor STE2 GPCR PF02116 IPR000366
STE3 Pheromone A receptor PF02076 IPR001499
Ste50p-SAM Ste50p, sterile alpha motif PF09235 IPR015316
Sterile Male sterility protein PF03015 IPR004262
Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase PF02544 IPR001104
Sterol_MT_C Sterol methyltransferase C-terminal PF08498 IPR013705
Stig1 Stigma-specific protein, Stig1 PF04885 IPR006969
Stirrup Stirrup PF09061 IPR015146
Stk19 Serine-threonine protein kinase 19 PF10494 IPR018865
Stm1_N Stm1 PF09598 IPR019084
STN Secretin and TonB N terminus short domain PF07660 IPR011662
Stn1 Telomere regulation protein Stn1 PF10451 IPR018856
STOP STOP protein PF05217 IPR007882
Stork_head Winged helix Storkhead-box1 domain PF10264 IPR019391
Strabismus Strabismus protein PF06638 IPR009539
Strep_67kDa_ant Streptococcal 67 kDa myosin-cross-reactive antigen like family PF06100 IPR010354
Strep_his_triad Streptococcal histidine triad protein PF04270 IPR006270
Strep_SA_rep Streptococcal surface antigen repeat PF06696 IPR009578
Striatin Striatin family PF08232 IPR013258
Strumpellin Hereditary spastic paraplegia protein strumpellin PF10266 IPR019393
Str_synth Strictosidine synthase PF03088 IPR018119
STT3 Oligosaccharyl transferase STT3 subunit PF02516 IPR003674
SUA5 SUA5 domain PF03481 IPR005145
Sua5_yciO_yrdC yrdC domain PF01300 IPR006070
Succ_DH_flav_C Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain PF02910 IPR004112
Sucrose_synth Sucrose synthase PF00862 IPR000368
Suc_Fer-like Sucrase/ferredoxin-like PF06999 IPR009737
Suf Suppressor of forked protein (Suf) PF05843 IPR008847
SufE Fe-S metabolism associated domain PF02657 IPR003808
SUFU Suppressor of fused protein (SUFU) PF05076 IPR020941
Sugar-bind Putative sugar-binding domain PF04198 IPR007324
Sugar_tr Sugar (and other) transporter PF00083 IPR005828
Sugar_transport Sugar transport protein PF06800 IPR010651
SUI1 Translation initiation factor SUI1 PF01253 IPR001950
SulA Cell division inhibitor SulA PF03846 IPR004596
Sulfakinin Sulfakinin family PF08257 IPR013259
Sulfatase Sulfatase PF00884 IPR000917
Sulfate_transp Sulfate transporter family PF00916 IPR011547
Sulfolobus_pRN Sulfolobus plasmid regulatory protein PF05584 IPR008848
Sulfotransfer_1 Sulfotransferase domain PF00685 IPR000863
Sulfotransfer_2 Sulfotransferase PF03567 IPR005331
Sulphotransf Stf0 sulphotransferase PF09037
SUN Beta-glucosidase (SUN family) PF03856 IPR005556
Supt5 Supt5 repeat PF03439 IPR005100
SUR7 SUR7 protein PF06687 IPR009571
SurA_N SurA N-terminal domain PF09312 IPR015391
SurE Survival protein SurE PF01975 IPR002828
SURF1 SURF1 family PF02104 IPR002994
SURF2 Surfeit locus protein 2 (SURF2) PF05477 IPR008833
SURF4 SURF4 family PF02077 IPR002995
SURF5 Surfeit locus protein 5 PF06179
SURF6 Surfeit locus protein 6 PF04935 IPR007019
Surface_Ag_2 Surface antigen PF01617 IPR002566
Surfac_D-trimer Lung surfactant protein D coiled-coil trimerisation PF09006 IPR015097
Surf_Ag_VNR Surface antigen variable number repeat PF07244 IPR010827
SURNod19 Stress up-regulated Nod 19 PF07712 IPR011692
Surp Surp module PF01805 IPR000061
SusD_RagB RagB, SusD and hypothetical proteins PF07980 IPR012944
Sushi Sushi domain (SCR repeat) PF00084 IPR000436
Sushi_2 Beta-2-glycoprotein-1 fifth domain PF09014 IPR015104
SVA Seminal vesicle autoantigen (SVA) PF05326 IPR007990
Svf1 Svf1-like PF08622 IPR013931
SVS_QK Seminal vesicle protein repeat PF10578 IPR018942
Swi3 Replication Fork Protection Component Swi3 PF07962 IPR012923
Swi5 Swi5 PF07061 IPR010760
SWIB SWIB/MDM2 domain PF02201 IPR003121
SWIM SWIM zinc finger PF04434 IPR007527
SWIRM SWIRM domain PF04433 IPR007526
Sybindin Sybindin-like family PF04099 IPR007233
Syd Syd protein PF07348 IPR009948
SYF2 SYF2 splicing factor PF08231 IPR013260
Syja_N SacI homology domain PF02383 IPR002013
Synaphin Synaphin protein PF05835 IPR008849
Synapsin Synapsin, N-terminal domain PF02078
Synapsin_C Synapsin, ATP binding domain PF02750
Synapsin_N Synapsin N-terminal PF10581 IPR019569
Synaptobrevin Synaptobrevin PF00957 IPR001388
Syndecan Syndecan domain PF01034 IPR001050
Syntaxin Syntaxin PF00804 IPR006011
Syntaxin-18_N SNARE-complex protein Syntaxin-18 N-terminus PF10496 IPR019529
Syntaxin-6_N Syntaxin 6, N-terminal PF09177 IPR015260
Synuclein Synuclein PF01387 IPR001058
SYS1 Integral membrane protein S linking to the trans Golgi network PF09801 IPR019185
S_100 S-100/ICaBP type calcium binding domain PF01023 IPR013787
S_layer_C S-layer like family, C-terminal region PF05124 IPR022651
S_layer_N S-layer like family, N-terminal region PF05123 IPR022650
S_locus_glycop S-locus glycoprotein family PF00954 IPR000858
T-box T-box PF00907 IPR001699
T4-Gluco-transf Bacteriophage T4 beta-glucosyltransferase PF09198 IPR015281
T4-helicase_C T4 gene 59 helicase, C terminal PF08994 IPR015086
T4-helicase_N T4 gene 59 helicase, N terminal PF08993 IPR015085
T4SS Type IV secretion system proteins PF07996 IPR012991
T4_deiodinase Iodothyronine deiodinase PF00837 IPR000643
T4_gp9_10 Bacteriophage T4 gp9/10-like protein PF07880 IPR008987
T5orf172 T5orf172 domain PF10544 IPR018306
TACC Transforming acidic coiled-coil-containing protein (TACC) PF05010 IPR007707
Tachykinin Tachykinin family PF02202 IPR002040
TACI-CRD2 TACI, cysteine-rich domain PF09305 IPR015384
TadE TadE-like protein PF07811 IPR012495
Taeniidae_ag Taeniidae antigen PF05596 IPR008860
TAF TATA box binding protein associated factor (TAF) PF02969 IPR004823
TAF4 Transcription initiation factor TFIID component TAF4 family PF05236 IPR007900
TAF8_C Transcription factor TFIID complex subunit 8 C-term PF10406 IPR019473
TAFH NHR1 homology to TAF PF07531 IPR003894
Tafi-CsgC Thin aggregative fimbriae synthesis protein PF10610 IPR014491
Tafi-CsgF Curli production assembly/transport component CsgF PF10614 IPR018893
TAFII28 hTAFII28-like protein conserved region PF04719 IPR006809
TAFII55_N TAFII55 protein conserved region PF04658 IPR006751
Tagatose_6_P_K Tagatose 6 phosphate kinase PF08013 IPR012062
Tail_P2_I Phage tail protein (Tail_P2_I) PF09684
Tail_tube Phage tail tube protein PF10618 IPR019596
Talin_middle Talin, middle domain PF09141 IPR015224
Tannase Tannase and feruloyl esterase PF07519 IPR011118
Tap-RNA_bind Tap, RNA-binding PF09162
TAP35_44 Tapetum specific protein TAP35/TAP44 PF07265 IPR009891
TAP42 TAP42-like family PF04177 IPR007304
Tape_meas_lam_C Lambda phage tail tape-measure protein (Tape_meas_lam_C) PF09718
TAP_C TAP C-terminal domain PF03943 IPR005637
Taq-exonuc Taq polymerase, exonuclease PF09281 IPR015361
TarH Tar ligand binding domain homologue PF02203 IPR003122
TAS2R Mammalian taste receptor protein (TAS2R) PF05296 IPR007960
Tash_PEST Tash protein PEST motif PF07708 IPR011695
Tat Transactivating regulatory protein (Tat) PF00539 IPR001831
TATA_RF TATA-binding related factor (TRF) PF08612 IPR013921
TatC Sec-independent protein translocase protein (TatC) PF00902 IPR002033
TatD_DNase TatD related DNase PF01026 IPR001130
TATR Trans-activating transcriptional regulator PF03430 IPR005092
TAT_signal TAT (twin-arginine translocation) pathway signal sequence PF10518 IPR019546
TAT_ubiq Aminotransferase ubiquitination site PF07706 IPR011715
Tau95 RNA polymerase III transcription factor (TF)IIIC subunit PF09734 IPR019136
TauD Taurine catabolism dioxygenase TauD, TfdA family PF02668 IPR003819
Tautomerase Tautomerase enzyme PF01361 IPR004370
Tax HTLV Tax PF02959 IPR004120
Taxilin Myosin-like coiled-coil protein PF09728 IPR019132
TB TB domain PF00683 IPR002212
TB2_DP1_HVA22 TB2/DP1, HVA22 family PF03134 IPR004345
TBC TBC domain PF00566 IPR000195
TBCA Tubulin binding cofactor A PF02970 IPR004226
TBCC Tubulin binding cofactor C PF07986 IPR012945
Tbf5 Transcription factor TFIIH complex subunit Tfb5 PF06331 IPR009400
TBP Transcription factor TFIID (or TATA-binding protein, TBP) PF00352 IPR000814
TBP-binding TATA box-binding protein binding PF09247 IPR009067
TBPIP Tat binding protein 1(TBP-1)-interacting protein (TBPIP) PF07106 IPR010776
TBSV_P22 TBSV core protein P21/P22 PF03558 IPR005332
TCL1_MTCP1 TCL1/MTCP1 family PF01840 IPR004832
TCO89 TORC1 subunit TCO89 PF10452 IPR018857
TCP TCP family transcription factor PF03634 IPR005333
Tcp10_C T-complex protein 10 C-terminus PF07202 IPR009852
Tcp11 T-complex protein 11 PF05794 IPR008862
TcpA Toxin-coregulated pilus subunit TcpA PF05946 IPR010271
TcpF Vibrio cholerae toxin co-regulated pilus biosynthesis protein F (TcpF) PF06340 IPR009405
TcpQ Toxin co-regulated pilus biosynthesis protein Q PF10671 IPR018927
Tctex-1 Tctex-1 family PF03645 IPR005334
TCTP Translationally controlled tumour protein PF00838 IPR018105
TDH Vibrio thermostable direct hemolysin PF03347 IPR005015
TEA TEA/ATTS domain family PF01285 IPR000818
TEBP_beta Telomere-binding protein beta subunit (TEBP beta) PF07404 IPR010874
Tecti-min-caps Tectiviridae, minor capsid PF09300 IPR015379
TehB Tellurite resistance protein TehB PF03848 IPR015985
Tektin Tektin family PF03148 IPR000435
TelA Toxic anion resistance protein (TelA) PF05816 IPR008863
Telethonin Telethonin protein PF09470 IPR015667
Tellurium_res Tellurium resistance protein PF10138 IPR019303
Telomere_reg-2 Telomere length regulation protein PF10193 IPR019337
Telo_bind Telomere-binding protein alpha subunit, central domain PF02765 IPR011564
TENA_THI-4 TENA/THI-4/PQQC family PF03070 IPR004305
Tenui_N Tenuivirus nucleocapsid protein PF05733 IPR009522
Tenui_NCP Tenuivirus major non-capsid protein PF04876 IPR006960
Tenui_NS3 Tenuivirus NS-3 Protein PF05310 IPR007974
Tenui_NS4 Tenuivirus non-structural protein NS4 PF03300 IPR004980
Tenui_PV2 Tenuivirus PV2 protein PF07375 IPR009965
Tenui_PVC2 Tenuivirus PVC2 protein PF06656 IPR009547
Ten_N Teneurin Intracellular Region PF06484 IPR009471
TEP1_N TEP1 N-terminal domain PF05386 IPR008850
Ter DNA replication terminus site-binding protein (Ter protein) PF05472 IPR008865
TerB Tellurite resistance protein TerB PF05099 IPR007791
TerC Integral membrane protein TerC family PF03741 IPR005496
TerD Bacterial stress protein PF02342 IPR003325
Terminase_1 Phage Terminase PF03354 IPR005021
Terminase_2 Terminase small subunit PF03592 IPR005335
Terminase_3 Phage terminase large subunit PF04466 IPR006701
Terminase_4 Phage terminase, small subunit PF05119
Terminase_5 Putative ATPase subunit of terminase (gpP-like) PF06056 IPR010332
Terminase_6 Terminase-like family PF03237 IPR004921
Terminase_GpA Phage terminase large subunit (GpA) PF05876 IPR008866
Terpene_synth Terpene synthase, N-terminal domain PF01397 IPR001906
Terpene_synth_C Terpene synthase family, metal binding domain PF03936 IPR005630
TES Trematode Eggshell Synthesis PF08034 IPR012615
TetM_leader Tetracycline resistance determinant leader peptide PF08076 IPR012992
Tetradecapep Myoactive tetradecapeptides family PF08187 IPR012619
Tetraspannin Tetraspanin family PF00335 IPR018499
TetR_C Tetracyclin repressor, C-terminal all-alpha domain PF02909 IPR004111
TetR_C_2 MAATS-type transcriptional repressor, C-terminal region PF08361 IPR013572
TetR_C_3 YcdC-like protein, C-terminal region PF08362 IPR013573
TetR_C_4 YsiA-like protein, C-terminal region PF08359 IPR013570
TetR_C_5 QacR-like protein, C-terminal region PF08360 IPR013571
TetR_N Bacterial regulatory proteins, tetR family PF00440 IPR001647
Tet_res_leader Tetracycline resistance leader peptide PF08050 IPR012618
Tex_N Tex-like protein N-terminal domain PF09371 IPR018974
TFA Transcription elongation factor A, SII-related family PF06137
Tfb2 Transcription factor Tfb2 PF03849 IPR004598
Tfb4 Transcription factor Tfb4 PF03850 IPR004600
TFIIA Transcription factor IIA, alpha/beta subunit PF03153 IPR004855
TFIIA_gamma_C Transcription initiation factor IIA, gamma subunit, beta-barrel domain PF02751 IPR015871
TFIIA_gamma_N Transcription initiation factor IIA, gamma subunit, helical domain PF02268 IPR015872
TFIIB Transcription factor TFIIB repeat PF00382 IPR013150
TFIIB_Zn_Ribbon TFIIB zinc-binding PF08271 IPR013137
TFIID-18kDa Transcription initiation factor IID, 18kD subunit PF02269 IPR003195
TFIID-31kDa Transcription initiation factor IID, 31kD subunit PF02291 IPR003162
TFIID_20kDa Transcription initiation factor TFIID subunit A PF03847 IPR003228
TFIID_30kDa Transcription initiation factor TFIID 23-30kDa subunit PF03540 IPR003923
TFIID_90kDa WD40 associated region in TFIID subunit PF04494 IPR007582
TFIIE_alpha TFIIE alpha subunit PF02002
TFIIE_beta TFIIE beta subunit core domain PF02186 IPR003166
TFIIF_alpha Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) PF05793 IPR008851
TFIIF_beta Transcription initiation factor IIF, beta subunit PF02270 IPR003196
TFIIH_BTF_p62_N TFIIH p62 subunit, N-terminal domain PF08567 IPR013876
TFIIIC_subunit TFIIIC subunit PF10419 IPR019481
TFIIS Transcription elongation factor S-II protein N terminal PF08711 IPR017923
TFIIS_C Transcription factor S-II (TFIIS) PF01096 IPR001222
TFIIS_M Transcription factor S-II (TFIIS), central domain PF07500 IPR003618
TfoX_C TfoX C-terminal domain PF04994 IPR007077
TfoX_N TfoX N-terminal domain PF04993 IPR007076
TFP11 Tuftelin interacting protein 11 PF08697
TFR_dimer Transferrin receptor-like dimerisation domain PF04253 IPR007365
TfuA TfuA-like protein PF07812 IPR012924
TF_AP-2 Transcription factor AP-2 PF03299 IPR013854
TF_Otx Otx1 transcription factor PF03529 IPR013851
TGFb_propeptide TGF-beta propeptide PF00688 IPR001111
TGF_beta Transforming growth factor beta like domain PF00019 IPR001839
TGF_beta_GS Transforming growth factor beta type I GS-motif PF08515 IPR003605
TGS TGS domain PF02824 IPR004095
TGT Queuine tRNA-ribosyltransferase PF01702 IPR002616
TH1 TH1 protein PF04858 IPR006942
THAP THAP domain PF05485 IPR006612
Thaumatin Thaumatin family PF00314 IPR001938
Thermopsin Thermopsin PF05317 IPR007981
THF_DHG_CYH Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PF00763 IPR020630
THF_DHG_CYH_C Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PF02882 IPR020631
Thg1 tRNAHis guanylyltransferase PF04446 IPR007537
Thi4 Thi4 family PF01946
Thia_YuaJ Thiamine transporter protein (Thia_YuaJ) PF09515 IPR012651
ThiC ThiC family PF01964 IPR002817
ThiF ThiF family PF00899 IPR000594
ThiG Thiazole biosynthesis protein ThiG PF05690 IPR008867
ThiI Thiamine biosynthesis protein (ThiI) PF02568 IPR020536
Thioesterase Thioesterase domain PF00975 IPR001031
Thiol-ester_cl Alpha-macro-globulin thiol-ester bond-forming region PF10569 IPR019565
Thiolase_C Thiolase, C-terminal domain PF02803 IPR020617
Thiolase_N Thiolase, N-terminal domain PF00108 IPR020616
Thiol_cytolysin Thiol-activated cytolysin PF01289 IPR001869
Thionin Plant thionin PF00321 IPR001010
Thioredoxin Thioredoxin PF00085 IPR013766
ThiS ThiS family PF02597 IPR003749
ThiW Thiamine-precursor transporter protein (ThiW) PF09512 IPR012652
THOC7 Tho complex subunit 7 PF05615 IPR008501
THP2 Tho complex subunit THP2 PF09432 IPR018557
Thrombin_light Thrombin light chain PF09396 IPR018992
Thr_dehydrat_C C-terminal regulatory domain of Threonine dehydratase PF00585 IPR001721
Tht1 Tht1-like nuclear fusion protein PF04163 IPR007292
THUMP THUMP domain PF02926 IPR004114
Thy1 Thymidylate synthase complementing protein PF02511 IPR003669
Thymidylate_kin Thymidylate kinase PF02223 IPR000062
Thymidylat_synt Thymidylate synthase PF00303 IPR000398
Thymopoietin Thymopoietin protein PF08198 IPR013146
Thymosin Thymosin beta-4 family PF01290 IPR001152
Thyroglobulin_1 Thyroglobulin type-1 repeat PF00086 IPR000716
Tic20 Chloroplast import component protein (Tic20) PF09685 IPR019109
Tic22 Tic22-like family PF04278 IPR007378
tify tify domain PF06200 IPR010399
TIG IPT/TIG domain PF01833 IPR002909
TIL Trypsin Inhibitor like cysteine rich domain PF01826 IPR018453
TIL_assoc TILa domain PF02345
TIM Triosephosphate isomerase PF00121 IPR000652
TIM-br_sig_trns TIM-barrel signal transduction protein PF09370 IPR009215
Tim17 Tim17/Tim22/Tim23 family PF02466 IPR003397
TIM21 TIM21 PF08294 IPR013261
Tim44 Tim44-like domain PF04280 IPR007379
TIMELESS Timeless protein PF04821 IPR006906
TIMELESS_C Timeless protein C terminal region PF05029 IPR007725
TIMP Tissue inhibitor of metalloproteinase PF00965 IPR001820
Tiny_TM_bacill Protein of unknown function (Tiny_TM_bacill) PF09680 IPR010070
TIP120 TATA-binding protein interacting (TIP20) PF08623 IPR013932
TIP41 TIP41-like family PF04176 IPR007303
TIP49 TIP49 C-terminus PF06068 IPR010339
TipAS TipAS antibiotic-recognition domain PF07739 IPR012925
TIR TIR domain PF01582 IPR000157
TIR-like Predicted nucleotide-binding protein containing TIR-like domain PF10137 IPR019302
Tir_receptor_C Translocated intimin receptor (Tir) C-terminus PF07489
Tir_receptor_M Translocated intimin receptor (Tir) intimin-binding domain PF03549 IPR003536
Tir_receptor_N Translocated intimin receptor (Tir) N-terminus PF07490
Tis11B_N Tis11B like protein, N terminus PF04553 IPR007635
Tissue_fac Tissue factor PF01108 IPR001187
Titin_Z Titin Z PF09042 IPR015129
TK Thymidine kinase PF00265 IPR001267
TLC TLC ATP/ADP transporter PF03219
TLD TLD PF07534
TLE_N Groucho/TLE N-terminal Q-rich domain PF03920 IPR005617
TLP-20 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) PF06088 IPR009092
TLV_coat ENV polyprotein (coat polyprotein) PF00429 IPR018154
TM2 TM2 domain PF05154 IPR007829
TMA7 Translation machinery associated TMA7 PF09072 IPR015157
TMC TMC domain PF07810 IPR012496
Tme5_EGF_like Thrombomodulin like fifth domain, EGF-like PF09064 IPR015149
Tmem26 Transmembrane protein 26 PF09772 IPR019169
Tmemb_14 Transmembrane proteins 14C PF03647 IPR005349
Tmemb_161AB Predicted transmembrane protein 161AB PF10268 IPR019395
Tmemb_170 Putative transmembrane protein 170 PF10190 IPR019334
Tmemb_185A Transmembrane Fragile-X-F protein PF10269 IPR019396
Tmemb_18A Transmembrane protein 188 PF09771 IPR019168
Tmemb_32 Transmembrane protein precursor 32 PF10270 IPR018937
Tmemb_40 Predicted membrane protein PF10160 IPR018781
Tmemb_55A Transmembrane protein 55A PF09788 IPR019178
Tmemb_9 TMEM9 PF05434 IPR008853
Tmemb_cc2 Predicted transmembrane and coiled-coil 2 protein PF10267 IPR019394
TmoB Toluene-4-monooxygenase system protein B (TmoB) PF06234 IPR009355
TMP TMP repeat PF05017
TMP-TENI Thiamine monophosphate synthase/TENI PF02581 IPR003733
Tmp39 Putative transmembrane protein PF10271 IPR019397
TMPIT TMPIT-like protein PF07851 IPR012926
Tmpp129 Putative transmembrane protein precursor PF10272 IPR018801
TMP_2 Prophage tail length tape measure protein PF06791 IPR009628
TMV_coat Virus coat protein (TMV like) PF00721 IPR001337
TM_helix Conserved TM helix PF05552 IPR008910
Tn916-Xis Excisionase from transposon Tn916 PF09035
Tna_leader Tryptophanese operon leader peptide PF08053 IPR012620
TNF TNF(Tumour Necrosis Factor) family PF00229 IPR006052
TNFR_c6 TNFR/NGFR cysteine-rich region PF00020 IPR001368
TniB Bacterial TniB protein PF05621 IPR008868
TniQ TniQ PF06527 IPR009492
TnsA_C TnsA endonuclease C terminal PF08721 IPR014832
TnsA_N TnsA endonuclease N terminal PF08722 IPR014833
TNV_CP Satellite tobacco necrosis virus coat protein PF03898 IPR005597
TOBE TOBE domain PF03459 IPR005116
TOBE_2 TOBE domain PF08402 IPR013611
Tobravirus_2B Tobravirus 2B protein PF05271 IPR007935
TolA TolA protein PF06519 IPR014161
TolB_N TolB amino-terminal domain PF04052 IPR007195
Toluene_X Outer membrane protein transport protein (OMPP1/FadL/TodX) PF03349 IPR005017
Tol_Tol_Ttg2 Toluene tolerance, Ttg2 PF05494 IPR008869
TOM13 Outer membrane protein TOM13 PF08219 IPR013262
TOM20_plant Plant specific mitochondrial import receptor subunit TOM20 PF06552 IPR010547
Tom22 Mitochondrial import receptor subunit Tom22 PF04281 IPR005683
Tom37 Outer mitochondrial membrane transport complex protein PF10568 IPR019564
Tom5 Mitochondrial import receptor subunit or translocase of outer membrane 5kDa PF10642 IPR019603
Tom7 TOM7 family PF08038 IPR012621
Tombus_movement Tombusvirus movement protein PF05318 IPR007982
Tombus_P19 Tombusvirus P19 core protein PF03220 IPR004905
Tombus_P33 Tombusvirus p33 PF08500 IPR013707
TonB Gram-negative bacterial tonB protein PF03544 IPR006260
TonB_dep_Rec TonB dependent receptor PF00593 IPR000531
Topo-VIb_trans Topoisomerase VI B subunit, transducer PF09239 IPR015320
Topoisom_bac DNA topoisomerase PF01131 IPR013497
Topoisom_I Eukaryotic DNA topoisomerase I, catalytic core PF01028 IPR013500
Topoisom_I_N Eukaryotic DNA topoisomerase I, DNA binding fragment PF02919 IPR008336
Topo_Zn_Ribbon Topoisomerase I zinc-ribbon-like PF08272 IPR013263
Toprim Toprim domain PF01751 IPR006171
Toprim_N DNA primase catalytic core, N-terminal domain PF08275 IPR013264
TorD Cytoplasmic chaperone TorD PF06192
Torsin Torsin PF06309 IPR010448
Tospo_nucleocap Tospovirus nucleocapsid protein PF01533 IPR002517
Totivirus_coat Totivirus coat protein PF05518 IPR008871
Tower Tower PF09121 IPR015205
Toxin_1 Snake toxin PF00087 IPR003571
Toxin_10 Insecticidal Crystal Toxin, P42 PF05431 IPR008872
Toxin_11 Spasmodic peptide gm9a PF07473 IPR010012
Toxin_12 Spider potassium channel inhibitory toxin PF07740 IPR011696
Toxin_13 Neurotoxin B-IV-like protein PF07822 IPR012497
Toxin_14 Alpha-A conotoxin PIVA-like protein PF07829 IPR012498
Toxin_15 ShET2 enterotoxin, N-terminal region PF07906 IPR012927
Toxin_16 Janus-atracotoxin PF07945 IPR012499
Toxin_17 Ergtoxin family PF08086 IPR012622
Toxin_18 Conotoxin O-superfamily PF08087 IPR012623
Toxin_19 Conotoxin I-superfamily PF08088 IPR012624
Toxin_2 Scorpion short toxin PF00451 IPR001947
Toxin_20 Huwentoxin-II family PF08089 IPR012625
Toxin_21 Spider insecticidal peptide PF08091 IPR012626
Toxin_22 Magi peptide toxin family PF08092 IPR012627
Toxin_23 Magi 5 toxic peptide family PF08093 IPR012628
Toxin_24 Conotoxin TVIIA/GS family PF08094 IPR012629
Toxin_25 Hefutoxin family PF08095 IPR012630
Toxin_26 Conotoxin T-superfamily PF08097 IPR012631
Toxin_27 Scorpion calcine family PF08099 IPR012632
Toxin_28 SFI toxin family PF08115 IPR012633
Toxin_29 PhTx neurotoxin family PF08116 IPR012634
Toxin_3 Scorpion toxin-like domain PF00537 IPR002061
Toxin_30 Ptu family PF08117 IPR012325
Toxin_31 Scorpion acidic alpha-KTx toxin family PF08119 IPR012635
Toxin_32 Tamulustoxin family PF08120 IPR012636
Toxin_33 Waglerin family PF08121 IPR012637
Toxin_34 Spider toxin omega agatoxin/Tx1 family PF08396 IPR013605
Toxin_35 Toxin with inhibitor cystine knot ICK or Knottin scaffold PF10530 IPR019553
Toxin_36 Conantokin-G mollusc-toxin PF10550 IPR005918
Toxin_4 Anenome neurotoxin PF00706 IPR000693
Toxin_5 Scorpion short toxin PF05294 IPR007958
Toxin_6 BmTXKS1/BmP02 toxin family PF05453 IPR008911
Toxin_7 Toxin 7 PF05980 IPR009243
Toxin_8 Alpha conotoxin precursor PF07365 IPR009958
Toxin_9 Spider toxin PF02819 IPR004169
Toxin_R_bind_C Clostridium neurotoxin, C-terminal receptor binding PF07951 IPR013104
Toxin_R_bind_N Clostridium neurotoxin, N-terminal receptor binding PF07953 IPR012928
Toxin_trans Clostridium neurotoxin, Translocation domain PF07952 IPR012500
TP1 Nuclear transition protein 1 PF02079 IPR001319
TP2 Nuclear transition protein 2 PF01254 IPR000678
TP6A_N Type IIB DNA topoisomerase PF04406 IPR013049
TP901-1_ORF40 TP901-1 ORF40-like protein PF07772
TPD52 Tumour protein D52 family PF04201 IPR007327
TPK_B1_binding Thiamin pyrophosphokinase, vitamin B1 binding domain PF04265
TPK_catalytic Thiamin pyrophosphokinase, catalytic domain PF04263 IPR007371
TPMT Thiopurine S-methyltransferase (TPMT) PF05724 IPR008854
TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PF02775 IPR011766
TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain PF00205 IPR012000
TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PF02776 IPR012001
TPR_1 Tetratricopeptide repeat PF00515 IPR001440
TPR_2 Tetratricopeptide repeat PF07719 IPR013105
TPR_3 Tetratricopeptide repeat PF07720 IPR011716
TPR_4 Tetratricopeptide repeat PF07721
TPR_MLP1_2 TPR/MLP1/MLP2-like protein PF07926 IPR012929
TPT Triose-phosphate Transporter family PF03151 IPR004853
TPX2 Targeting protein for Xklp2 (TPX2) PF06886 IPR009675
TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases PF00590 IPR000878
TraA TraA PF05513 IPR008873
TraB TraB family PF01963 IPR002816
TraB_2 TraB protein PF07186
TraB_pillus TraB pilus assembly protein PF06447
TraC TraC-like protein PF07820 IPR012930
TraD Conjugal transfer protein TraD PF06412 IPR009444
TRADD_N TRADD, N-terminal domain PF09034 IPR009095
TraE TraE protein PF05309
TraG TraG/TraD family PF02534 IPR003688
TraG_N TraG-like protein, N-terminal region PF07916 IPR012931
TraH Conjugative relaxosome accessory transposon protein PF06122 IPR010927
TraH_2 TraH_2 PF06871 IPR010680
TraI DNA helicase TraI PF07057 IPR009767
TraI_2 Putative helicase PF07514 IPR011119
TraK TraK protein PF06586 IPR010563
TraL TraL protein PF07178 IPR009838
TRAM TRAM domain PF01938 IPR002792
TRAM1 TRAM1-like protein PF08390 IPR013599
TRAM_LAG1_CLN8 TLC domain PF03798 IPR006634
TraN Mating pair stabilisation protein TraN PF06986 IPR009726
Transaldolase Transaldolase PF00923 IPR001585
Transferase Transferase family PF02458 IPR003480
Transferrin Transferrin PF00405 IPR001156
Transformer Fruit fly transformer protein PF06495 IPR010519
Transglut_C Transglutaminase family, C-terminal ig like domain PF00927 IPR008958
Transglut_core Transglutaminase-like superfamily PF01841 IPR002931
Transglut_N Transglutaminase family PF00868 IPR001102
Transglut_prok Microbial transglutaminase PF09017 IPR015107
Transgly Transglycosylase PF00912 IPR001264
Transglycosylas Transglycosylase-like domain PF06737 IPR010618
Transgly_assoc Transglycosylase associated protein PF04226 IPR007341
Transketolase_C Transketolase, C-terminal domain PF02780 IPR005476
Transketolase_N Transketolase, thiamine diphosphate binding domain PF00456 IPR005474
Transket_pyr Transketolase, pyrimidine binding domain PF02779 IPR005475
Translat_reg Bacteriophage translational regulator PF01818 IPR002702
Translin Translin family PF01997 IPR002848
Transmemb_17 Predicted membrane protein PF09799 IPR019184
Transpeptidase Penicillin binding protein transpeptidase domain PF00905 IPR001460
Transposase_1 Transposase PF01359 IPR001888
Transposase_11 Transposase DDE domain PF01609 IPR002559
Transposase_12 Transposase PF01610 IPR002560
Transposase_14 Transposase PF01710 IPR002622
Transposase_17 Transposase IS200 like PF01797 IPR002686
Transposase_2 Probable transposase PF01385 IPR001959
Transposase_20 Transposase IS116/IS110/IS902 family PF02371 IPR003346
Transposase_21 Transposase family tnp2 PF02992 IPR004242
Transposase_22 L1 transposable element PF02994 IPR004244
Transposase_23 TNP1/EN/SPM transposase PF03017 IPR004264
Transposase_24 Plant transposase (Ptta/En/Spm family) PF03004 IPR004252
Transposase_25 Transposase IS66 family PF03050 IPR004291
Transposase_27 IS1 transposase PF03400 IPR005063
Transposase_28 Putative gypsy type transposon PF04195 IPR007321
Transposase_29 Archaeal putative transposase ISC1217 PF04693 IPR006783
Transposase_30 Bacillus transposase protein PF04740 IPR006829
Transposase_31 Putative transposase, YhgA-like PF04754 IPR006842
Transposase_32 Putative transposase PF04986 IPR007069
Transposase_33 Sulfolobus transposase PF05457
Transposase_34 IS66 Orf2 like protein PF05717 IPR008878
Transposase_35 Putative transposase DNA-binding domain PF07282 IPR010095
Transposase_36 Rhodopirellula transposase PF07592 IPR011518
Transposase_5 Transposase PF01498 IPR002492
Transposase_7 Transposase PF01526 IPR002513
Transposase_8 Transposase PF01527 IPR002514
Transposase_9 Transposase PF01548 IPR002525
Transposase_mut Transposase, Mutator family PF00872 IPR001207
Transposase_Tc5 Tc5 transposase PF03221 IPR004906
Transposase_Tn5 Transposase Tn5 dimerisation domain PF02281 IPR003201
Transp_cyt_pur Permease for cytosine/purines, uracil, thiamine, allantoin PF02133 IPR001248
Transp_Tc5_C Tc5 transposase C-terminal domain PF04236 IPR007350
Transthyretin HIUase/Transthyretin family PF00576 IPR000895
Trans_reg_C Transcriptional regulatory protein, C terminal PF00486 IPR001867
TraO Conjugative transposon protein TraO PF10626 IPR018899
TraP TraP protein PF07296 IPR009913
TRAP-delta Translocon-associated protein, delta subunit precursor (TRAP-delta) PF05404 IPR008855
TRAP-gamma Translocon-associated protein, gamma subunit (TRAP-gamma) PF07074 IPR009779
TRAPP Transport protein particle (TRAPP) component PF04051 IPR007194
TRAP_240kDa TRAP240 PF06333 IPR009401
TRAP_alpha Translocon-associated protein (TRAP), alpha subunit PF03896 IPR005595
TRAP_beta Translocon-associated protein beta (TRAPB) PF05753 IPR008856
TraQ Type-F conjugative transfer system pilin chaperone (TraQ) PF09679 IPR014112
TraS Plasmid conjugative transfer entry exclusion protein TraS PF10624 IPR018898
TraT Enterobacterial TraT complement resistance protein PF05818 IPR008874
TraU TraU protein PF06834 IPR009649
TRAUB TRAUB (NUC102) domain PF08164 IPR012617
TraV Type IV conjugative transfer system lipoprotein (TraV) PF09676 IPR014118
TraX TraX protein PF05857 IPR008875
TraY TraY family PF05509 IPR008876
Tra_M TraM protein PF05261 IPR007925
TrbC TrbC/VIRB2 family PF04956 IPR007039
TrbC_Ftype Type-F conjugative transfer system pilin assembly protein (TrbC_Ftype) PF09673 IPR019106
TrbD Conjugal transfer protein TrbD PF05245
TrbF Conjugal transfer protein PF04585
TrbH Conjugal transfer protein TrbH PF07283 IPR010837
TrbI Bacterial conjugation TrbI-like protein PF03743 IPR005498
TrbI_Ftype Type-F conjugative transfer system protein (TrbI_Ftype) PF09677
TrbL TrbL/VirB6 plasmid conjugal transfer protein PF04610 IPR007688
TrbM TrbM PF07424 IPR009989
TRCF TRCF domain PF03461 IPR005118
Treacle Treacher Collins syndrome protein Treacle PF03546 IPR003993
Trefoil Trefoil (P-type) domain PF00088 IPR000519
Trehalase Trehalase PF01204 IPR001661
Trehalase_Ca-bi Neutral trehalase Ca2+ binding domain PF07492 IPR011120
Trehalose_PPase Trehalose-phosphatase PF02358 IPR003337
Trehalose_recp Trehalose receptor PF06151 IPR009318
Trep_dent_lipo Treponema clustered lipoprotein (Trep_dent_lipo) PF09710 IPR019122
Trep_Strep Hypothetical bacterial integral membrane protein (Trep_Strep) PF09605 IPR011733
TRF Telomere repeat binding factor (TRF) PF08558 IPR013867
TrfA TrfA protein PF07042 IPR010751
TRH Thyrotropin-releasing hormone (TRH) PF05438 IPR008857
TRI12 Fungal trichothecene efflux pump (TRI12) PF06609 IPR010573
Tri3 15-O-acetyltransferase Tri3 PF07428 IPR009992
TRI5 Trichodiene synthase (TRI5) PF06330
TRI9 TRI9 protein PF08195 IPR013265
Triabin Triabin PF03973 IPR005657
Triadin Triadin PF07169
Tricho_coat Trichovirus coat protein PF05892 IPR008879
Trigger_C Bacterial trigger factor protein (TF) C-terminus PF05698 IPR008880
Trigger_N Bacterial trigger factor protein (TF) PF05697 IPR008881
TrkA_C TrkA-C domain PF02080 IPR006037
TrkA_N TrkA-N domain PF02254 IPR003148
TrkH Cation transport protein PF02386 IPR003445
TRM N2,N2-dimethylguanosine tRNA methyltransferase PF02005 IPR002905
Trm112p Trm112p-like protein PF03966 IPR005651
TRM13 Methyltransferase TRM13 PF05206 IPR007871
TrmB Sugar-specific transcriptional regulator TrmB PF01978 IPR002831
TrmE_N GTP-binding protein TrmE N-terminus PF10396 IPR018948
tRNA-synt_1 tRNA synthetases class I (I, L, M and V) PF00133 IPR002300
tRNA-synt_1b tRNA synthetases class I (W and Y) PF00579 IPR002305
tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain PF00749 IPR020058
tRNA-synt_1c_C tRNA synthetases class I (E and Q), anti-codon binding domain PF03950 IPR020059
tRNA-synt_1d tRNA synthetases class I (R) PF00750 IPR015945
tRNA-synt_1e tRNA synthetases class I (C) catalytic domain PF01406 IPR015803
tRNA-synt_1f tRNA synthetases class I (K) PF01921 IPR020754
tRNA-synt_1g tRNA synthetases class I (M) PF09334 IPR015413
tRNA-synt_2 tRNA synthetases class II (D, K and N) PF00152 IPR004364
tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T) PF00587 IPR002314
tRNA-synt_2c tRNA synthetases class II (A) PF01411 IPR018164
tRNA-synt_2d tRNA synthetases class II core domain (F) PF01409 IPR002319
tRNA-synt_2e Glycyl-tRNA synthetase alpha subunit PF02091 IPR002310
tRNA-Thr_ED Archaea-specific editing domain of threonyl-tRNA synthetase PF08915 IPR015011
tRNA_anti OB-fold nucleic acid binding domain PF01336 IPR004365
tRNA_bind Putative tRNA binding domain PF01588 IPR002547
tRNA_deacylase D-aminoacyl-tRNA deacylase PF04414 IPR007508
tRNA_int_endo tRNA intron endonuclease, catalytic C-terminal domain PF01974 IPR006677
tRNA_int_endo_N tRNA intron endonuclease, N-terminal domain PF02778 IPR006678
tRNA_lig_CPD Fungal tRNA ligase phosphodiesterase domain PF08302 IPR015965
tRNA_lig_kinase tRNA ligase kinase domain PF08303 IPR015966
tRNA_lig_trans Fungal tRNA ligase adenylyltransferase PF08304
tRNA_m1G_MT tRNA (Guanine-1)-methyltransferase PF01746 IPR016009
tRNA_Me_trans tRNA methyl transferase PF03054
tRNA_NucTransf2 tRNA nucleotidyltransferase, second domain PF09249 IPR015329
tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain PF07973 IPR012947
tRNA_synt_1c_R1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 PF04558 IPR007639
tRNA_synt_1c_R2 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 PF04557 IPR007638
tRNA_synt_2f Glycyl-tRNA synthetase beta subunit PF02092 IPR002311
tRNA_U5-meth_tr tRNA (Uracil-5-)-methyltransferase PF05958 IPR010280
Tropomodulin Tropomodulin PF03250 IPR004934
Tropomyosin Tropomyosin PF00261 IPR000533
Troponin Troponin PF00992 IPR001978
TROVE TROVE domain PF05731 IPR008858
TRP Transient receptor potential (TRP) ion channel PF06011 IPR010308
TrpBP Tryptophan RNA-binding attenuator protein PF02081 IPR000824
TRP_2 Transient receptor ion channel II PF08344 IPR013555
Trp_dioxygenase Tryptophan 2,3-dioxygenase PF03301 IPR004981
Trp_halogenase Tryptophan halogenase PF04820 IPR006905
Trp_leader1 Tryptophan leader peptide PF08055 IPR012638
Trp_leader2 Tryptophan operon leader peptide PF08056 IPR012639
Trp_oprn_chp Tryptophan-associated transmembrane protein (Trp_oprn_chp) PF09534 IPR019051
Trp_repressor Trp repressor protein PF01371 IPR000831
Trp_syntA Tryptophan synthase alpha chain PF00290 IPR002028
Trp_Tyr_perm Tryptophan/tyrosine permease family PF03222 IPR018227
Trs120 Transport protein Trs120 PF08626 IPR013935
TruB-C_2 Pseudouridine synthase II TruB, C-terminal PF09157 IPR015240
TruB_C tRNA Pseudouridine synthase II, C terminal PF09142 IPR015225
TruB_N TruB family pseudouridylate synthase (N terminal domain) PF01509 IPR002501
TruD tRNA pseudouridine synthase D (TruD) PF01142 IPR001656
TrwB_AAD_bind Type IV secretion-system coupling protein DNA-binding domain PF10412 IPR019476
TrwC TrwC relaxase PF08751 IPR014862
Trypan_glycop Trypanosome variant surface glycoprotein PF00913 IPR001812
Trypan_glycop_C Trypanosome variant surface glycoprotein C-terminal domain PF10659 IPR019609
Trypan_PARP Procyclic acidic repetitive protein (PARP) PF05887 IPR008882
Trypsin Trypsin PF00089 IPR001254
Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family PF00234 IPR003612
Tryp_FSAP Tryptophyllin-3 skin active peptide PF08248 IPR013266
TSA Type specific antigen PF03249 IPR004933
TSC22 TSC-22/dip/bun family PF01166 IPR000580
Tsg Twisted gastrulation (Tsg) protein conserved region PF04668 IPR006761
TSGP1 Tick salivary peptide group 1 PF07771 IPR011694
TSNR_N Thiostrepton-resistance methylase, N terminus PF04705 IPR006795
Tsp45I Tsp45I type II restriction enzyme PF06300 IPR010443
TspO_MBR TspO/MBR family PF03073 IPR004307
TSP_1 Thrombospondin type 1 domain PF00090 IPR000884
TSP_3 Thrombospondin type 3 repeat PF02412 IPR003367
TSP_C Thrombospondin C-terminal region PF05735 IPR008859
TTKRSYEDQ Predicted coiled-coil domain-containing protein PF10212 IPR019348
TTL Tubulin-tyrosine ligase family PF03133 IPR004344
TT_ORF1 TT viral orf 1 PF02956 IPR004219
TT_ORF2 TT viral ORF2 PF02957 IPR004118
TT_ORF2a pORF2a truncated protein PF08197 IPR013267
Tub Tub family PF01167 IPR000007
Tuberin Tuberin PF03542 IPR018515
Tubulin Tubulin/FtsZ family, GTPase domain PF00091 IPR003008
Tubulin-binding Tau and MAP protein, tubulin-binding repeat PF00418 IPR001084
Tubulin_C Tubulin/FtsZ family, C-terminal domain PF03953 IPR018316
TUDOR Tudor domain PF00567 IPR008191
Tup_N Tup N-terminal PF08581 IPR013890
Turandot Stress-inducible humoral factor Turandot PF07240 IPR010825
Tweety Tweety PF04906 IPR006990
TYA TYA transposon protein PF01021 IPR015820
TyeA TyeA PF09059 IPR015144
TylF Macrocin-O-methyltransferase (TylF) PF05711 IPR008884
Tymo_45kd_70kd Tymovirus 45/70Kd protein PF03251 IPR004935
Tymo_coat Tymovirus coat protein PF00983 IPR000574
Type_III_YscG Bacterial type II secretion system chaperone protein (type_III_yscG) PF09477 IPR013348
Type_III_YscP Type III secretion system (type_III_yscP) PF09473
Type_III_YscX Type III secretion system YscX (type_III_YscX) PF09474 IPR012672
Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase PF06087 IPR010347
Tyrosinase Common central domain of tyrosinase PF00264 IPR002227
Tyr_Deacylase D-Tyr-tRNA(Tyr) deacylase PF02580 IPR003732
TYW3 Methyltransferase TYW3 PF02676 IPR003827
T_Ag_DNA_bind Origin of replication binding protein PF02217 IPR003133
U-box U-box domain PF04564 IPR003613
U3_assoc_6 U3 small nucleolar RNA-associated protein 6 PF08640 IPR013949
U3_snoRNA_assoc U3 snoRNA associated PF08297 IPR013268
U3_snoRNA_C U3 small nucleolar RNA C terminal PF09384 IPR018983
U5_2-snRNA_bdg U5-snRNA binding site 2 of PrP8 PF10597 IPR019581
U6-snRNA_bdg U6-snRNA interacting domain of PrP8 PF10596 IPR019580
U79_P34 HSV U79 / HCMV P34 PF03064 IPR004138
UAA UAA transporter family PF08449 IPR013657
UAF_Rrn10 UAF complex subunit Rrn10 PF05234
UBA UBA/TS-N domain PF00627 IPR000449
UBACT Repeat in ubiquitin-activating (UBA) protein PF02134 IPR000127
UBA_2 Ubiquitin associated domain (UBA) PF08587 IPR013896
UBA_3 Fungal ubiquitin-associated domain PF09288 IPR015368
UBA_e1_C Ubiquitin-activating enzyme e1 C-terminal domain PF09358 IPR018965
UBA_e1_thiolCys Ubiquitin-activating enzyme active site PF10585 IPR019572
UbiA UbiA prenyltransferase family PF01040 IPR000537
UbiD 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PF01977 IPR002830
Ubie_methyltran ubiE/COQ5 methyltransferase family PF01209 IPR004033
Ubiq-assoc Ubiquitin-associated PF09145 IPR015228
Ubiq-Cytc-red_N Ubiquinol-cytochrome c reductase 8 kDa, N-terminal PF09165 IPR015248
ubiquitin Ubiquitin family PF00240 IPR000626
Ubiq_cyt_C_chap Ubiquinol-cytochrome C chaperone PF03981 IPR021150
UBX UBX domain PF00789 IPR001012
UCH Ubiquitin carboxyl-terminal hydrolase PF00443 IPR001394
UcrQ UcrQ family PF02939 IPR004205
UCR_14kD Ubiquinol-cytochrome C reductase complex 14kD subunit PF02271 IPR003197
UCR_6-4kD Ubiquinol-cytochrome C reductase complex, 6.4kD protein PF08997 IPR015089
UCR_Fe-S_N Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PF10399 IPR019470
UCR_hinge Ubiquinol-cytochrome C reductase hinge protein PF02320 IPR003422
UCR_TM Ubiquinol cytochrome reductase transmembrane region PF02921 IPR004192
UCR_UQCRX_QCR9 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PF05365 IPR008027
uDENN uDENN domain PF03456 IPR005113
UDG Uracil DNA glycosylase superfamily PF03167 IPR005122
UDP-g_GGTase UDP-glucose:Glycoprotein Glucosyltransferase PF06427 IPR009448
UDPGP UTP--glucose-1-phosphate uridylyltransferase PF01704 IPR002618
UDPGT UDP-glucoronosyl and UDP-glucosyl transferase PF00201 IPR002213
UDPG_MGDP_dh UDP-glucose/GDP-mannose dehydrogenase family, central domain PF00984 IPR014026
UDPG_MGDP_dh_C UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PF03720 IPR014027
UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PF03721 IPR001732
UEV UEV domain PF05743 IPR008883
UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 PF08694 IPR014806
UFD1 Ubiquitin fusion degradation protein UFD1 PF03152 IPR004854
Ufd2P_core Ubiquitin elongating factor core PF10408 IPR019474
Ufm1 Ubiquitin fold modifier 1 protein PF03671 IPR005375
UIM Ubiquitin interaction motif PF02809 IPR003903
UK Virulence determinant PF02512
UL2 UL2 protein PF08196 IPR013269
UL40 Glycoprotein of human cytomegalovirus HHV-5 PF10682 IPR019624
UL97 UL97 PF06734 IPR010615
Umbravirus_LDM Umbravirus long distance movement (LDM) family PF04817 IPR006902
UME UME (NUC010) domain PF08064 IPR012993
UMP1 Proteasome maturation factor UMP1 PF05348 IPR008012
UMPH-1 Pyrimidine 5'-nucleotidase (UMPH-1) PF05822
UnbV_ASPIC ASPIC and UnbV PF07593 IPR011519
UNC-50 UNC-50 family PF05216 IPR007881
Unstab_antitox Putative addiction module component PF09720 IPR013406
UPAR_LY6 u-PAR/Ly-6 domain PF00021 IPR001526
UPF0004 Uncharacterized protein family UPF0004 PF00919 IPR013848
UPF0005 Uncharacterised protein family UPF0005 PF01027 IPR006214
UPF0014 Uncharacterised protein family (UPF0014) PF03649 IPR005226
UPF0016 Uncharacterized protein family UPF0016 PF01169 IPR001727
UPF0020 Putative RNA methylase family UPF0020 PF01170 IPR000241
UPF0027 Uncharacterized protein family UPF0027 PF01139 IPR001233
UPF0029 Uncharacterized protein family UPF0029 PF01205 IPR001498
UPF0041 Uncharacterised protein family (UPF0041) PF03650 IPR005336
UPF0047 Uncharacterised protein family UPF0047 PF01894 IPR001602
UPF0051 Uncharacterized protein family (UPF0051) PF01458 IPR000825
UPF0052 Uncharacterised protein family UPF0052 PF01933 IPR002882
UPF0054 Uncharacterized protein family UPF0054 PF02130 IPR002036
UPF0057 Uncharacterized protein family UPF0057 PF01679 IPR000612
UPF0058 Uncharacterised protein family UPF0058 PF01893 IPR002753
UPF0060 Uncharacterised BCR, YnfA/UPF0060 family PF02694 IPR003844
UPF0061 Uncharacterized ACR, YdiU/UPF0061 family PF02696 IPR003846
UPF0066 Uncharacterised protein family UPF0066 PF01980 IPR001378
UPF0075 Uncharacterised protein family (UPF0075) PF03702 IPR005338
UPF0079 Uncharacterised P-loop hydrolase UPF0079 PF02367 IPR003442
UPF0081 Uncharacterised protein family (UPF0081) PF03652 IPR005227
UPF0086 Domain of unknown function UPF0086 PF01868 IPR002730
UPF0089 Uncharacterised protein family (UPF0089) PF03007 IPR004255
UPF0093 Uncharacterised protein family (UPF0093) PF03653 IPR005265
UPF0102 Uncharacterised protein family UPF0102 PF02021 IPR003509
UPF0104 Uncharacterised protein family (UPF0104) PF03706
UPF0113 Uncharacterised protein family (UPF0113) PF03657 IPR005155
UPF0114 Uncharacterized protein family, UPF0114 PF03350 IPR005134
UPF0118 Domain of unknown function DUF20 PF01594 IPR002549
UPF0121 Uncharacterised protein family (UPF0121) PF03661 IPR005344
UPF0122 Putative helix-turn-helix protein, YlxM / p13 like PF04297 IPR007394
UPF0125 Uncharacterised protein family (UPF0125) PF03658 IPR005346
UPF0126 UPF0126 domain PF03458 IPR005115
UPF0128 Uncharacterised protein family (UPF0128) PF03673 IPR005266
UPF0132 Uncharacterised protein family (UPF0132) PF03675
UPF0137 Uncharacterised protein family (UPF0137) PF03677 IPR005350
UPF0139 Uncharacterised protein family (UPF0139) PF03669 IPR005351
UPF0146 Uncharacterised protein family (UPF0146) PF03686 IPR005353
UPF0147 Uncharacterised protein family (UPF0147) PF03685 IPR005354
UPF0149 Uncharacterised protein family (UPF0149) PF03695 IPR011978
UPF0150 Uncharacterised protein family (UPF0150) PF03681 IPR005357
UPF0153 Uncharacterised protein family (UPF0153) PF03692 IPR005358
UPF0154 Uncharacterised protein family (UPF0154) PF03672 IPR005359
UPF0157 Uncharacterised protein family (UPF0157) PF04229 IPR007344
UPF0158 Uncharacterised protein family (UPF0158) PF03682 IPR005361
UPF0160 Uncharacterised protein family (UPF0160) PF03690 IPR003226
UPF0164 Uncharacterised protein family (UPF0164) PF03687 IPR005362
UPF0167 Uncharacterised protein family (UPF0167) PF03691 IPR005363
UPF0171 Uncharacterised protein family (UPF0171) PF03666 IPR005365
UPF0172 Uncharacterised protein family (UPF0172) PF03665 IPR005366
UPF0174 Uncharacterised protein family (UPF0174) PF03667
UPF0175 Uncharacterised protein family (UPF0175) PF03683 IPR005368
UPF0179 Uncharacterised protein family (UPF0179) PF03684 IPR005369
UPF0180 Uncharacterised protein family (UPF0180) PF03698 IPR005370
UPF0181 Uncharacterised protein family (UPF0181) PF03701 IPR005371
UPF0182 Uncharacterised protein family (UPF0182) PF03699 IPR005372
UPF0183 Uncharacterised protein family (UPF0183) PF03676 IPR005373
UPF0184 Uncharacterised protein family (UPF0184) PF03670
UPF0187 Uncharacterised protein family (UPF0187) PF05249
UPF0193 Uncharacterised protein family (UPF0193) PF05250 IPR007914
UPF0197 Uncharacterised protein family (UPF0197) PF05251 IPR007915
UPF0203 Uncharacterised protein family (UPF0203) PF05254 IPR007918
UPF0220 Uncharacterised protein family (UPF0220) PF05255 IPR007919
UPF0223 Uncharacterised protein family (UPF0223) PF05256 IPR007920
UPF0224 Uncharacterised protein family (UPF0224) PF05253
UPF0227 Uncharacterised protein family (UPF0227) PF05728 IPR008886
UPF0228 Uncharacterised protein family (UPF0228) PF05727 IPR008887
UPF0231 Uncharacterised protein family (UPF0231) PF06062 IPR008249
UPF0233 Uncharacterised protein family (UPF0233) PF06781 IPR009619
UPF0236 Uncharacterised protein family (UPF0236) PF06782 IPR009620
UPF0239 Uncharacterised protein family (UPF0239) PF06783 IPR009621
UPF0240 Uncharacterised protein family (UPF0240) PF06784 IPR009622
UPF0242 Uncharacterised protein family (UPF0242) PF06785 IPR009623
UPF0253 Uncharacterised protein family (UPF0253) PF06786 IPR009624
UPF0254 Uncharacterised protein family (UPF0254) PF06787 IPR009625
UPF0257 Uncharacterised protein family (UPF0257) PF06788 IPR010646
UPF0258 Uncharacterised protein family (UPF0258) PF06789 IPR009626
UPF0259 Uncharacterised protein family (UPF0259) PF06790 IPR009627
UPF0261 Uncharacterised protein family (UPF0261) PF06792 IPR008322
UPF0262 Uncharacterised protein family (UPF0262) PF06793 IPR008321
UPF0270 Uncharacterised protein family (UPF0270) PF06794 IPR010648
UPF0278 UPF0278 family PF08745
UPF0300 Uncharacterised protein family (UPF0300) PF08594 IPR013903
UPF0302 UPF0302 domain PF08864 IPR014963
UPF0546 Uncharacterised protein family UPF0546 PF10639 IPR018908
UPF0547 Uncharacterised protein family UPF0547 PF10571 IPR018886
UPF0552 Uncharacterised protein family UPF0552 PF10574 IPR018889
UPF0556 Uncharacterised protein family UPF0556 PF10572 IPR018887
UPF0560 Uncharacterised protein family UPF0560 PF10577 IPR018890
UPF0561 Uncharacterised protein family UPF0561 PF10573 IPR018888
UPF0564 Uncharacterised protein family UPF0564 PF10595 IPR019579
UPF0565 Uncharacterised protein family UPF0565 PF10561 IPR018881
UPF1_Zn_bind RNA helicase (UPF2 interacting domain) PF09416 IPR018999
Upf2 Up-frameshift suppressor 2 PF04050 IPR007193
UQ_con Ubiquitin-conjugating enzyme PF00179 IPR000608
Urb2 Urb2/Npa2 family PF10441 IPR018849
Urease_alpha Urease alpha-subunit, N-terminal domain PF00449 IPR011612
Urease_beta Urease beta subunit PF00699 IPR002019
Urease_gamma Urease, gamma subunit PF00547 IPR002026
UreD UreD urease accessory protein PF01774 IPR002669
UreE_C UreE urease accessory protein, C-terminal domain PF05194 IPR007864
UreE_N UreE urease accessory protein, N-terminal domain PF02814 IPR004029
UreF UreF PF01730 IPR002639
Ureidogly_hydro Ureidoglycolate hydrolase PF04115 IPR007247
Uricase Uricase PF01014 IPR002042
Urm1 Urm1 (Ubiquitin related modifier) PF09138 IPR015221
URO-D Uroporphyrinogen decarboxylase (URO-D) PF01208 IPR000257
Urocanase Urocanase PF01175 IPR000193
Uroplakin_II Uroplakin II PF07353 IPR009952
Urotensin_II Urotensin II PF02083 IPR001483
US2 US2 family PF02476 IPR003485
US22 US22 like PF02393 IPR003360
Use1 Membrane fusion protein Use1 PF09753 IPR019150
Usg Usg-like family PF06233 IPR009354
Usher Fimbrial Usher protein PF00577 IPR000015
Uso1_p115_C Uso1 / p115 like vesicle tethering protein, C terminal region PF04871 IPR006955
Uso1_p115_head Uso1 / p115 like vesicle tethering protein, head region PF04869 IPR006953
Usp Universal stress protein family PF00582 IPR006016
USP8_interact USP8 interacting PF08941 IPR015036
UspB Universal stress protein B (UspB) PF10625 IPR019598
Ustilago_mating Ustilago B locus mating-type protein PF05722 IPR008888
UT Urea transporter PF03253 IPR004937
Uteroglobin Uteroglobin family PF01099 IPR006038
Utp11 Utp11 protein PF03998 IPR007144
Utp12 Dip2/Utp12 Family PF04003 IPR007148
Utp13 Utp13 specific WD40 associated domain PF08625 IPR013934
Utp14 Utp14 protein PF04615 IPR006709
Utp21 Utp21 specific WD40 associated putative domain PF04192 IPR007319
Utp8 Utp8 family PF10395 IPR018843
UTRA UTRA domain PF07702 IPR011663
UvdE UV-endonuclease UvdE PF03851 IPR004601
UVR UvrB/uvrC motif PF02151 IPR001943
UvrC_HhH_N UvrC Helix-hairpin-helix N-terminal PF08459 IPR001162
UvrD-helicase UvrD/REP helicase PF00580 IPR000212
UxaC Glucuronate isomerase PF02614 IPR003766
UxuA D-mannonate dehydratase (UxuA) PF03786 IPR004628
V-ATPase_C V-ATPase subunit C PF03223 IPR004907
V-ATPase_G Vacuolar (H+)-ATPase G subunit PF03179 IPR005124
V-ATPase_H V-ATPase subunit H PF03224 IPR004908
V-set Immunoglobulin V-set domain PF07686 IPR013106
V-set_CD47 CD47 immunoglobulin-like domain PF08204 IPR013270
V-SNARE Vesicle transport v-SNARE protein PF05008 IPR007705
v110 Viral family 110 PF01639 IPR004848
V1R Vomeronasal organ pheromone receptor family, V1R PF03402 IPR004072
V4R V4R domain PF02830 IPR004096
VacA Vacuolating cyotoxin PF02691 IPR003842
VacA2 Putative vacuolating cytotoxin PF03077 IPR004311
VacJ VacJ like lipoprotein PF04333 IPR007428
Vac_Fusion Chordopoxvirus fusion protein PF02346 IPR003436
Vac_ImportDeg Vacuolar import and degradation protein PF09783 IPR018618
Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding arm PF10458 IPR019499
VanW VanW like protein PF04294 IPR007391
VanY D-alanyl-D-alanine carboxypeptidase PF02557 IPR003709
VanZ VanZ like family PF04892 IPR006976
VapD Virulence-associated protein D (VapD) PF04605
VAR1 Mitochondrial ribosomal protein (VAR1) PF05316 IPR007980
Varsurf_PPLC Variant-surface-glycoprotein phospholipase C PF03490 IPR003633
VASP_tetra VASP tetramerisation domain PF08776 IPR014885
vATP-synt_AC39 ATP synthase (C/AC39) subunit PF01992 IPR002843
vATP-synt_E ATP synthase (E/31 kDa) subunit PF01991 IPR002842
Vault Major Vault Protein repeat PF01505 IPR002499
VBS Vinculin Binding Site PF08913 IPR015009
VD10_N Viral D10 N-terminal PF08476 IPR013683
VDE Violaxanthin de-epoxidase (VDE) PF07137 IPR010788
VDRIP Vitamin-D-receptor interacting protein complex component PF10018 IPR019258
VEFS-Box VEFS-Box of polycomb protein PF09733 IPR019135
Vel1p Velum formation protein PF10339 IPR019435
Vert_HS_TF Vertebrate heat shock transcription factor PF06546 IPR010542
Vert_IL3-reg_TF Vertebrate interleukin-3 regulated transcription factor PF06529 IPR010533
Vesiculo_matrix Vesiculovirus matrix protein PF06326 IPR009397
VGCC_alpha2 Neuronal voltage-dependent calcium channel alpha 2acd PF08473 IPR013680
Vg_Tdu Vestigial/Tondu family PF07545 IPR011520
VHL von Hippel-Lindau disease tumour suppressor protein PF01847
VHP Villin headpiece domain PF02209 IPR003128
Vhr1 Transcription factor Vhr1 PF04001 IPR007147
VHS VHS domain PF00790 IPR002014
Vicilin_N Vicilin N terminal region PF04702 IPR006792
VID27 VID27 cytoplasmic protein PF08553 IPR013863
Vif Retroviral Vif (Viral infectivity) protein PF00559 IPR000475
Vinculin Vinculin family PF01044 IPR006077
Viral-P_C Viral P-protein, C-terminal region PF08380
Viral_Beta_CD Viral Beta C/D like family PF04530 IPR007617
Viral_coat Viral coat protein (S domain) PF00729 IPR000937
Viral_cys_rich Viral cysteine rich PF08008 IPR012641
Viral_DNA_bi Viral DNA-binding protein, all alpha domain PF02236 IPR003176
Viral_DNA_bp ssDNA binding protein PF00747 IPR000635
Viral_DNA_Zn_bi Viral DNA-binding protein, zinc binding domain PF03728 IPR005376
Viral_env Viral envelope protein PF08791
Viral_helicase1 Viral (Superfamily 1) RNA helicase PF01443 IPR000606
Viral_Hsp90 Viral heat shock protein Hsp90 homologue PF03225 IPR004909
Viral_NABP Viral nucleic acid binding PF05515 IPR008891
Viral_P18 ssRNA positive strand viral 18kD cysteine rich protein PF04521 IPR007609
Viral_protease Papain like viral protease PF08715 IPR014827
Viral_Rep Putative viral replication protein PF02407 IPR003365
Viral_Rep_C Viral replication domain C-terminal PF08419
VirB VirB/Tra/Trw family PF08139 IPR012640
VirB3 Type IV secretory pathway, VirB3-like protein PF05101 IPR007792
VirB7 T-complex transport apparatus lipoprotein VirB7 PF07269
VirB8 VirB8 protein PF04335 IPR007430
VirC1 VirC1 protein PF07015
VirC2 VirC2 protein PF07181 IPR009841
VirD1 T-DNA border endonuclease VirD1 PF07328 IPR009933
VirDNA-topo-I_N Viral DNA topoisomerase I, N-terminal PF09266 IPR015346
VirE Virulence-associated protein E PF05272 IPR007936
VirE2 VirE2 PF07229 IPR009868
VirE3 VirE3 PF06661 IPR009550
VirE_N VirE N-terminal domain PF08800 IPR014907
VirJ Bacterial virulence protein (VirJ) PF06057 IPR010333
VirK VirK protein PF06903 IPR010694
Virul_Fac Uncharacterized protein conserved in bacteria, putative virulence factor PF10139 IPR017030
Virus_HS Virion host shutoff protein PF01550
Vir_act_alpha_C Virulence activator alpha C-term PF10400 IPR018309
VIT Vault protein inter-alpha-trypsin PF08487 IPR013694
VitD-bind_III Vitamin D binding protein, domain III PF09164 IPR015247
Vitelline_membr Vitelline membrane cysteine-rich region PF10542 IPR013135
Vitellogenin_N Lipoprotein amino terminal region PF01347 IPR001747
VKG_Carbox Vitamin K-dependent gamma-carboxylase PF05090
VKOR Vitamin K epoxide reductase family PF07884 IPR012932
VlpA_repeat Mycoplasma hyorhinis VlpA repeat PF04649 IPR006743
VLPT Variable length PCR target protein (VLPT) PF07122 IPR009805
VMA21 VMA21-like domain PF09446 IPR019013
Vmethyltransf Viral methyltransferase PF01660 IPR002588
Vmethyltransf_C Viral methyltransferase C-terminal PF08456 IPR013664
vMSA Major surface antigen from hepadnavirus PF00695 IPR000349
Voltage_CLC Voltage gated chloride channel PF00654 IPR001807
VOMI Vitelline membrane outer layer protein I (VOMI) PF03762 IPR005515
VP4 Outer Capsid protein VP4 (Hemagglutinin) PF00426 IPR000416
VP40 Matrix protein VP40 PF07447 IPR008986
VP7 Glycoprotein VP7 PF00434 IPR001963
VP9 VP9 protein PF09625 IPR018587
VPEP PEP-CTERM motif PF07589 IPR011449
VPR VPR/VPX protein PF00522 IPR000012
Vps16_C Vps16, C-terminal region PF04840 IPR006925
Vps16_N Vps16, N-terminal region PF04841 IPR006926
Vps23_core Vps23 core domain PF09454 IPR017916
Vps26 Vacuolar protein sorting-associated protein 26 PF03643 IPR005377
VPS28 VPS28 protein PF03997 IPR007143
Vps35 Vacuolar protein sorting-associated protein 35 PF03635 IPR005378
Vps39_1 Vacuolar sorting protein 39 domain 1 PF10366 IPR019452
Vps39_2 Vacuolar sorting protein 39 domain 2 PF10367 IPR019453
Vps4_C Vps4 C terminal oligomerisation domain PF09336 IPR015415
Vps5 Vps5 C terminal like PF09325 IPR015404
Vps51 Vps51/Vps67 PF08700 IPR014812
Vps52 Vps52 / Sac2 family PF04129 IPR007258
Vps53_N Vps53-like, N-terminal PF04100 IPR007234
Vps54 Vps54-like protein PF07928 IPR012501
Vps55 Vacuolar protein sorting 55 PF04133 IPR007262
VPS9 Vacuolar sorting protein 9 (VPS9) domain PF02204 IPR003123
Vpu Vpu protein PF00558 IPR008187
VQ VQ motif PF05678 IPR008889
VRP1 Salmonella virulence plasmid 28.1kDa A protein PF03538 IPR018003
VRP3 Salmonella virulence-associated 28kDa protein PF03536 IPR003519
VRR_NUC VRR-NUC domain PF08774 IPR014883
VSP Giardia variant-specific surface protein PF03302 IPR005127
Vsr DNA mismatch endonuclease Vsr PF03852 IPR004603
VTC VTC domain PF09359 IPR018966
VWA von Willebrand factor type A domain PF00092 IPR002035
VWA_CoxE VWA domain containing CoxE-like protein PF05762 IPR008912
VWA_N VWA N-terminal PF08399 IPR013608
VWC von Willebrand factor type C domain PF00093 IPR001007
VWD von Willebrand factor type D domain PF00094 IPR001846
V_ATPase_I V-type ATPase 116kDa subunit family PF01496 IPR002490
V_cholerae_RfbT Vibrio cholerae RfbT protein PF05575 IPR008890
W2 eIF4-gamma/eIF5/eIF2-epsilon PF02020 IPR003307
WaaY Lipopolysaccharide core biosynthesis protein (WaaY) PF06176
WAC_Acf1_DNA_bd ATP-utilising chromatin assembly and remodelling N-terminal PF10537 IPR013136
WAK Wall-associated kinase PF08488 IPR013695
WAP WAP-type (Whey Acidic Protein) 'four-disulfide core' PF00095 IPR008197
WAPL Wings apart-like protein PF07814
WavE WavE lipopolysaccharide synthesis PF07507 IPR011122
Wbp11 WW domain binding protein 11 PF09429 IPR019007
WbqC WbqC-like protein family PF08889 IPR014985
WCCH WCCH motif PF03716 IPR005159
WCOR413 Cold acclimation protein WCOR413 PF05562 IPR008892
WD-3 WD-repeat region PF09765 IPR019162
WD40 WD domain, G-beta repeat PF00400 IPR019781
WDYHV Uncharacterized conserved protein PF09764 IPR019161
WGG Pre-rRNA-processing protein TSR2 PF10273 IPR019398
WGR WGR domain PF05406 IPR008893
WH1 WH1 domain PF00568 IPR000697
WH2 WH2 motif PF02205 IPR003124
WHEP-TRS WHEP-TRS domain PF00458 IPR000738
Whi5 Whi5 like PF08528 IPR013734
WhiA_N Sporulation Regulator WhiA N terminal PF10298 IPR018478
Whib Transcription factor WhiB PF02467 IPR003482
Whirly Whirly transcription factor PF08536 IPR013742
WI12 Wound-induced protein WI12 PF07107 IPR009798
WIF WIF domain PF02019 IPR003306
WIYLD WIYLD domain PF10440 IPR018848
WLM WLM domain PF08325 IPR013536
WND WisP family N-Terminal Region PF07861 IPR012503
wnt wnt family PF00110 IPR005817
Wos2 Wos2 motif PF07988 IPR012642
Wound_ind Wound-inducible basic protein family PF08186 IPR012643
WRC WRC PF08879 IPR014977
WRKY WRKY DNA -binding domain PF03106 IPR003657
WRW Mitochondrial F1F0-ATP synthase, subunit f PF10206 IPR019344
WSC WSC domain PF01822 IPR002889
WSK WSK motif PF03832 IPR001573
WSN Domain of unknown function PF02206 IPR003125
WT1 Wilm's tumour protein PF02165 IPR000976
WTF WTF protein PF03303 IPR004982
WTX WTX protein PF09422 IPR019003
WW WW domain PF00397 IPR001202
WWamide WWamide peptide PF08258 IPR013271
WWbp WW-domain ligand protein PF10349 IPR018826
WWE WWE domain PF02825 IPR004170
Wx5_PLAF3D7 Protein of unknown function (Wx5_PLAF3D7) PF09688
WXG100 Proteins of 100 residues with WXG PF06013
Wyosine_form Wyosine base formation PF08608 IPR013917
WzyE WzyE protein PF06899 IPR010691
Wzy_C O-Antigen Polymerase PF04932 IPR007016
Wzz Chain length determinant protein PF02706 IPR003856
W_rich_C Tryptophan-rich Synechocystis species C-terminal domain PF07483 IPR011121
X Trans-activation protein X PF00739 IPR000236
X8 X8 domain PF07983 IPR012946
Xan_ur_permease Permease family PF00860 IPR006043
XAP5 XAP5 protein PF04921 IPR007005
XdhC_CoxI XdhC and CoxI family PF02625 IPR003777
XendoU Endoribonuclease XendoU PF09412 IPR018998
XET_C Xyloglucan endo-transglycosylase (XET) C-terminus PF06955 IPR010713
XFP D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase PF03894 IPR005593
XFP_C XFP C-terminal domain PF09363 IPR018969
XFP_N XFP N-terminal domain PF09364 IPR018970
XG_FTase Xyloglucan fucosyltransferase PF03254 IPR004938
XH XH domain PF03469 IPR005379
XhlA Haemolysin XhlA PF10779 IPR019715
XhoI Restriction endonuclease XhoI PF04555 IPR007636
Xin Xin repeat PF08043 IPR012510
XisH XisH protein PF08814 IPR014919
XisI XisI protein PF08869 IPR014968
XK-related XK-related protein PF09815 IPR018629
XkdN Phage XkdN-like protein PF08890 IPR014986
XkdW XkdW protein PF09636 IPR019094
XLF XLF (XRCC4-like factor) PF09302 IPR015381
Xlink Extracellular link domain PF00193 IPR000538
Xol-1_GHMP-like Switch protein XOL-1, GHMP-like PF09109 IPR015193
Xol-1_N Switch protein XOL-1, N-terminal PF09108 IPR015192
XPA_C XPA protein C-terminus PF05181
XPA_N XPA protein N-terminal PF01286
XPC-binding XPC-binding domain PF09280 IPR015360
XPG_I XPG I-region PF00867 IPR006086
XPG_N XPG N-terminal domain PF00752 IPR006085
Xpo1 Exportin 1-like protein PF08389 IPR013598
XRCC1_N XRCC1 N terminal domain PF01834 IPR002706
XRCC4 DNA double-strand break repair and V(D)J recombination protein XRCC4 PF06632 IPR010585
XRN_N XRN 5'-3' exonuclease N-terminus PF03159 IPR004859
XS XS domain PF03468 IPR005380
XylR_N Activator of aromatic catabolism PF06505 IPR010523
XYPPX XYPPX repeat PF02162 IPR006031
X_fast-SP_rel Xylella fastidiosa surface protein related PF06669 IPR009555
YABBY YABBY protein PF04690 IPR006780
YabP YabP family PF07873 IPR022476
YadA YadA-like C-terminal region PF03895 IPR005594
Yae1_N Essential protein Yae1, N terminal PF09811 IPR019191
YaeQ YaeQ protein PF07152 IPR009822
YagB_YeeU_YfjZ YagB/YeeU/YfjZ family PF06154 IPR009320
YajC Preprotein translocase subunit PF02699 IPR003849
YbaJ Biofilm formation regulator YbaJ PF10757 IPR019693
YbaK YbaK / prolyl-tRNA synthetases associated domain PF04073 IPR007214
YbbR YbbR-like protein PF07949 IPR012505
YbcF YbcF protein PF10575
YbgT_YccB Membrane bound YbgT-like protein PF08173 IPR012994
YbjN Putative bacterial sensory transduction regulator PF10722 IPR019660
YcaO YcaO-like family PF02624 IPR003776
YcbB YcbB domain PF08664 IPR013972
YccV-like Hemimethylated DNA-binding protein YccV like PF08755 IPR011722
YceI YceI-like domain PF04264 IPR007372
Ycf1 Ycf1 PF05758 IPR008896
Ycf15 Chloroplast protein precursor Ycf15 putative PF10705 IPR019645
Ycf34 Hypothetical chloroplast protein Ycf34 PF10718 IPR019656
Ycf4 Ycf4 PF02392 IPR003359
Ycf66_N Ycf66 protein N-terminus PF07444 IPR010004
Ycf9 YCF9 PF01737 IPR002644
YcfA YcfA-like protein PF07927 IPR012933
YcgL YcgL domain PF05166 IPR007840
YcgR YcgR protein PF07317 IPR009926
YchF-GTPase_C Protein of unknown function (DUF933) PF06071 IPR013029
YCII YCII-related domain PF03795 IPR005545
Ydc2-catalyt Mitochondrial resolvase Ydc2, catalytic PF09159 IPR015242
YDG_SRA YDG/SRA domain PF02182 IPR003105
ydhR Putative mono-oxygenase ydhR PF08803 IPR014910
YdjC YdjC-like protein PF04794 IPR006879
Yeast-kill-tox Yeast killer toxin PF09207 IPR015290
YEATS YEATS family PF03366 IPR005033
YebG YebG protein PF07130 IPR009813
YecM YecM protein PF06185 IPR010393
YfaZ YfaZ precursor PF07437 IPR009998
YfbU YfbU domain PF03887 IPR005587
YfcL YfcL protein PF08891 IPR014987
YfhO Bacterial membrane protein YfhO PF09586 IPR018580
YfkB YfkB-like domain PF08756 IPR014866
YfmQ Uncharacterised protein from bacillus cereus group PF10787 IPR019723
YgbB YgbB family PF02542 IPR003526
YGGT YGGT family PF02325 IPR003425
YhfT Protein of unknown function PF10797 IPR019733
YhhN YhhN-like protein PF07947 IPR012506
YhjQ YhjQ protein PF06564 IPR017746
YHS YHS domain PF04945 IPR007029
YiaAB yiaA/B two helix domain PF05360 IPR008024
YibE_F YibE/F-like protein PF07907 IPR012507
YicC_N YicC-like family, N-terminal region PF03755 IPR013527
YIF1 YIF1 PF03878 IPR005578
YiiD_Cterm Putative thioesterase (yiiD_Cterm) PF09500 IPR012660
Yip1 Yip1 domain PF04893 IPR006977
Yippee Yippee putative zinc-binding protein PF03226 IPR004910
YjcQ YjcQ protein PF09639 IPR018597
YjeF_N YjeF-related protein N-terminus PF03853 IPR004443
YjgP_YjgQ Predicted permease YjgP/YjgQ family PF03739 IPR005495
Ykof YKOF-related Family PF07615 IPR011522
YkuD Ykud domain PF03734 IPR005490
YkuI_C EAL-domain associated signalling protein domain PF10388 IPR018842
YkyA Putative cell-wall binding lipoprotein PF10368 IPR019454
YL1 YL1 nuclear protein PF05764 IPR008895
YL1_C YL1 nuclear protein C-terminal domain PF08265 IPR013272
YlaC Extracytoplasmic function sigma factor YlaC PF10777 IPR019713
YLP YLP motif PF02757
YMF19 Plant ATP synthase F0 PF02326 IPR003319
YodA YodA PF09223 IPR015304
YojJ Bacterial membrane-spanning protein N-terminus PF10372 IPR019457
YolD YolD-like protein PF08863 IPR014962
YonK YonK protein PF09642 IPR018600
YopD YopD protein PF05844 IPR008898
YopE Yersinia virulence determinant (YopE) PF03545 IPR014773
YopE_N YopE, N terminal PF09020 IPR015110
YopH_N YopH, N-terminal PF09013 IPR015103
YopJ YopJ Serine/Threonine acetyltransferase PF03421 IPR005083
YopR_core YopR Core PF09025 IPR013349
Yopt Hypothetical protein Yopt PF09467 IPR018572
YopX YopX protein PF09643 IPR019096
YorP YorP protein PF09629 IPR018591
Yos1 Yos1-like PF08571 IPR013880
YpM Yersinia pseudotuberculosis mitogen PF09144 IPR015227
Yqai Hypothetical protein Yqai PF09466 IPR018474
YqaJ YqaJ viral recombinase family PF09588 IPR019080
YqcI_YcgG YqcI/YcgG family PF08892 IPR014988
YqeY Yqey-like protein PF09424 IPR019004
YqfD Putative stage IV sporulation protein YqfD PF06898 IPR010690
YrbL-PhoP_reg PhoP regulatory network protein YrbL PF10707 IPR019647
YscI_HrpB_dom Bacterial type III secretion system protein (yscI_hrpB_dom) PF09525
YscJ_FliF Secretory protein of YscJ/FliF family PF01514 IPR006182
YscJ_FliF_C Flagellar M-ring protein C-terminal PF08345 IPR013556
YscK YOP proteins translocation protein K (YscK) PF06578 IPR009510
YscO Type III secretion protein YscO PF07321 IPR009929
YscW Type III secretion system lipoprotein chaperone (YscW) PF09619
YSIRK_signal YSIRK type signal peptide PF04650 IPR005877
YtfJ_HI0045 Bacterial protein of unknown function (YtfJ_HI0045) PF09695 IPR006513
YTH YT521-B-like family PF04146 IPR007275
Ytp1 Protein of unknown function (Ytp1) PF10355 IPR018827
YTV YTV PF07639 IPR011521
YtxC YtxC-like family PF08812 IPR014199
YugN YugN-like family PF08868 IPR014967
YukD YukD PF08817 IPR014921
YvfG YvfG protein PF09628 IPR018590
YwhD YwhD family PF08741 IPR014852
YycH YycH protein PF07435 IPR009996
YycI YycH protein PF09648 IPR018604
Y_phosphatase Protein-tyrosine phosphatase PF00102 IPR000242
Y_phosphatase2 Tyrosine phosphatase family PF03162 IPR004861
Y_Y_Y Y_Y_Y domain PF07495 IPR011123
z-alpha Adenosine deaminase z-alpha domain PF02295 IPR000607
Z1 Z1 domain PF10593 IPR018310
ZapA Cell division protein ZapA PF05164 IPR007838
Zds1_C Sporulation protein Zds1 C terminal region PF08632 IPR013941
Zea_mays_MuDR Zea mays MURB-like protein (MuDR) PF05928 IPR009227
Zein Zein seed storage protein PF01559 IPR002530
Zeta_toxin Zeta toxin PF06414 IPR010488
zf-4CXXC_R1 Zinc-finger domain of monoamine-oxidase A repressor R1 PF10497 IPR018866
zf-A20 A20-like zinc finger PF01754 IPR002653
zf-AD Zinc-finger associated domain (zf-AD) PF07776 IPR012934
zf-AN1 AN1-like Zinc finger PF01428 IPR000058
zf-BED BED zinc finger PF02892 IPR003656
zf-B_box B-box zinc finger PF00643 IPR000315
zf-C2H2 Zinc finger, C2H2 type PF00096 IPR007087
zf-C2HC Zinc finger, C2HC type PF01530 IPR002515
zf-C2HC5 Putative zinc finger motif, C2HC5-type PF06221 IPR009349
zf-C2HC_plant Protein of unknown function, DUF1544 PF07567
zf-C3H1 Putative zinc-finger domain PF10650 IPR019607
zf-C3HC C3HC zinc finger-like PF07967 IPR012935
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) PF00097 IPR018957
zf-C4 Zinc finger, C4 type (two domains) PF00105 IPR001628
zf-C4H2 Zinc finger-containing protein PF10146 IPR018482
zf-C4_C Zinc finger, C4 type, C-terminal PF08420 IPR013629
zf-C4_ClpX ClpX C4-type zinc finger PF06689 IPR010603
zf-C4_Topoisom Topoisomerase DNA binding C4 zinc finger PF01396 IPR013498
zf-C5HC2 C5HC2 zinc finger PF02928 IPR004198
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) PF00642 IPR000571
zf-CCHC Zinc knuckle PF00098 IPR001878
zf-CCHH Zinc-finger (CX5CX6HX5H) motif PF10283 IPR019406
zf-CDGSH Iron-binding zinc finger CDGSH type PF09360 IPR018967
zf-CHC2 CHC2 zinc finger PF01807 IPR002694
zf-CHCC Zinc-finger domain PF10276 IPR019401
zf-CHY CHY zinc finger PF05495 IPR008913
zf-CSL CSL zinc finger PF05207 IPR007872
zf-CW CW-type Zinc Finger PF07496 IPR011124
zf-CXXC CXXC zinc finger domain PF02008 IPR002857
zf-DBF DBF zinc finger PF07535 IPR006572
zf-DHHC DHHC zinc finger domain PF01529 IPR001594
zf-DNA_Pol DNA Polymerase alpha zinc finger PF08996 IPR015088
zf-DNL DNL zinc finger PF05180 IPR007853
zf-Dof Dof domain, zinc finger PF02701 IPR003851
zf-dskA_traR Prokaryotic dksA/traR C4-type zinc finger PF01258 IPR000962
zf-FCS MYM-type Zinc finger with FCS sequence motif PF06467 IPR010507
zf-Fe2-S2-FpoO Fe420H2 dehydrogenase subunit FpoO PF10621 IPR018288
zf-FPG_IleRS Zinc finger found in FPG and IleRS PF06827 IPR010663
zf-GRF GRF zinc finger PF06839 IPR010666
zf-H2C2 His(2)-Cys(2) zinc finger PF09337 IPR015416
ZF-HD_dimer ZF-HD protein dimerisation region PF04770 IPR006456
zf-HIT HIT zinc finger PF04438 IPR007529
zf-HYPF HypF finger PF07503 IPR011125
zf-like Cysteine-rich small domain PF04071 IPR007212
zf-LITAF-like LITAF-like zinc finger domain PF10601 IPR006629
zf-LSD1 LSD1 zinc finger PF06943 IPR005735
zf-LYAR LYAR-type C2HC zinc finger PF08790 IPR014898
zf-MIZ MIZ/SP-RING zinc finger PF02891 IPR004181
zf-MYND MYND finger PF01753 IPR002893
zf-NADH-PPase NADH pyrophosphatase zinc ribbon domain PF09297 IPR015376
zf-nanos Nanos RNA binding domain PF05741 IPR008705
zf-NF-X1 NF-X1 type zinc finger PF01422 IPR000967
zf-NPL4 NPL4 family, putative zinc binding region PF05020 IPR007716
zf-P11 P-11 zinc finger PF03854 IPR003224
zf-PARP Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region PF00645 IPR001510
zf-piccolo Piccolo Zn-finger PF05715 IPR008899
zf-primase Primase zinc finger PF09329 IPR015408
zf-RAG1 Recombination-activating protein 1 zinc-finger domain PF10426 IPR019485
zf-RanBP Zn-finger in Ran binding protein and others PF00641 IPR001876
zf-RING-like RING-like domain PF08746 IPR014857
zf-RNPHF RNPHF zinc finger PF08080 IPR012996
zf-Sec23_Sec24 Sec23/Sec24 zinc finger PF04810 IPR006895
zf-TAZ TAZ zinc finger PF02135 IPR000197
zf-Tim10_DDP Tim10/DDP family zinc finger PF02953 IPR004217
zf-TRAF TRAF-type zinc finger PF02176
zf-U1 U1 zinc finger PF06220 IPR013085
zf-UBP Zn-finger in ubiquitin-hydrolases and other protein PF02148 IPR001607
zf-UBR Putative zinc finger in N-recognin (UBR box) PF02207 IPR003126
zf-XS XS zinc finger domain PF03470 IPR005381
zf-ZPR1 ZPR1 zinc-finger domain PF03367 IPR004457
Zfx_Zfy_act Zfx / Zfy transcription activation region PF04704 IPR006794
Zip ZIP Zinc transporter PF02535 IPR003689
ZipA_C ZipA, C-terminal FtsZ-binding domain PF04354 IPR007449
Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain PF00172 IPR001138
Zn_dep_PLPC Zinc dependent phospholipase C PF00882 IPR001531
Zn_peptidase Putative neutral zinc metallopeptidase PF04228 IPR007343
Zn_peptidase_2 Putative neutral zinc metallopeptidase PF04298 IPR007395
Zona_pellucida Zona pellucida-like domain PF00100 IPR001507
Zot Zonular occludens toxin (Zot) PF05707 IPR008900
ZU5 ZU5 domain PF00791 IPR000906
Zw10 Centromere/kinetochore Zw10 PF06248 IPR009361
ZZ Zinc finger, ZZ type PF00569 IPR000433


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