| Pfam ID |
Description |
Accession |
Interpro ID |
| c-SKI_SMAD_bind |
c-SKI Smad4 binding domain | PF08782 | IPR014890 |
| C1-set |
Immunoglobulin C1-set domain | PF07654 | IPR003597 |
| C1q |
C1q domain | PF00386 | IPR001073 |
| C1_1 |
Phorbol esters/diacylglycerol binding domain (C1 domain) | PF00130 | IPR002219 |
| C1_2 |
C1 domain | PF03107 | IPR004146 |
| C1_3 |
C1-like domain | PF07649 | IPR011424 |
| C1_4 |
TFIIH C1-like domain | PF07975 | IPR004595 |
| C2 |
C2 domain | PF00168 | IPR000008 |
| C2-set |
Immunoglobulin C2-set domain | PF05790 | IPR008424 |
| C2-set_2 |
CD80-like C2-set immunoglobulin domain | PF08205 | IPR013162 |
| C4 |
C-terminal tandem repeated domain in type 4 procollagen | PF01413 | IPR001442 |
| C4dic_mal_tran |
C4-dicarboxylate transporter/malic acid transport protein | PF03595 | IPR004695 |
| C5-epim_C |
D-glucuronyl C5-epimerase C-terminus | PF06662 | IPR010598 |
| C6 |
C6 domain | PF01681 | IPR002601 |
| C6_DPF |
Cysteine-rich domain | PF10170 | IPR018785 |
| C8 |
C8 domain | PF08742 | IPR014853 |
| Caa3_CtaG |
Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) | PF09678 | IPR019108 |
| Cache_1 |
Cache domain | PF02743 | IPR004010 |
| Cache_2 |
Cache domain | PF08269 | IPR013163 |
| CactinC_cactus |
Cactus-binding C-terminus of cactin protein | PF09732 | IPR019134 |
| Cactin_mid |
Conserved mid region of cactin | PF10312 | IPR018816 |
| Cad |
Cadmium resistance transporter | PF03596 | IPR004676 |
| Cadherin |
Cadherin domain | PF00028 | IPR002126 |
| Cadherin_2 |
Cadherin-like | PF08266 | IPR013164 |
| Cadherin_C |
Cadherin cytoplasmic region | PF01049 | IPR000233 |
| Cadherin_pro |
Cadherin prodomain like | PF08758 | IPR014868 |
| Caenor_Her-1 |
Caenorhabditis elegans Her-1 | PF09232 | IPR015313 |
| Caerin_1 |
Caerin 1 protein | PF07440 | IPR010000 |
| CAF1 |
CAF1 family ribonuclease | PF04857 | IPR006941 |
| CagA |
CagA exotoxin | PF03507 | IPR005169 |
| CagE_TrbE_VirB |
CagE, TrbE, VirB family, component of type IV transporter system | PF03135 | IPR018145 |
| CagX |
Conjugal transfer protein | PF03524 | IPR010258 |
| CagY_M |
DC-EC Repeat | PF07337 | IPR010853 |
| CagZ |
CagZ | PF09053 | IPR015139 |
| CaKB |
Calcium-activated potassium channel, beta subunit | PF03185 | IPR003930 |
| Calcipressin |
Calcipressin | PF04847 | IPR006931 |
| CALCOCO1 |
Calcium binding and coiled-coil domain (CALCOCO1) like | PF07888 | IPR012852 |
| Calcyon |
D1 dopamine receptor-interacting protein (calcyon) | PF06387 | IPR009431 |
| Calc_CGRP_IAPP |
Calcitonin / CGRP / IAPP family | PF00214 | IPR021116 |
| Caldesmon |
Caldesmon | PF02029 | IPR006018 |
| Caleosin |
Caleosin related protein | PF05042 | IPR007736 |
| Calici_coat |
Calicivirus coat protein | PF00915 | IPR004005 |
| Calici_coat_C |
Calicivirus coat protein C-terminal | PF08435 | IPR013643 |
| Calici_MSP |
Calicivirus minor structural protein | PF05752 | IPR008437 |
| Calici_PP_N |
Viral polyprotein N-terminal | PF08405 | IPR013614 |
| Calmodulin_bind |
Calmodulin binding protein-like | PF07887 | IPR012416 |
| Calpain_III |
Calpain large subunit, domain III | PF01067 | IPR022682 |
| Calpain_inhib |
Calpain inhibitor | PF00748 | IPR001259 |
| Calponin |
Calponin family repeat | PF00402 | IPR000557 |
| Calreticulin |
Calreticulin family | PF00262 | IPR001580 |
| Calsarcin |
Calcineurin-binding protein (Calsarcin) | PF05556 | IPR008438 |
| Calsequestrin |
Calsequestrin | PF01216 | IPR001393 |
| Calx-beta |
Calx-beta domain | PF03160 | IPR003644 |
| CaMBD |
Calmodulin binding domain | PF02888 | IPR004178 |
| CaMKII_AD |
Calcium/calmodulin dependent protein kinase II Association | PF08332 | IPR013543 |
| Campylo_MOMP |
Campylobacter major outer membrane protein | PF05538 | IPR008439 |
| CAMP_factor |
CAMP factor (Cfa) | PF07373 | IPR010860 |
| CamS |
CamS sex pheromone cAM373 precursor | PF07537 | IPR011426 |
| CaM_bdg_C0 |
Calmodulin-binding domain C0 of NMDA receptor NR1 subunit | PF10562 | IPR018882 |
| CaM_binding |
Plant calmodulin-binding domain | PF07839 | IPR012417 |
| Candida_ALS |
Candida agglutinin-like protein (ALS) | PF05792 | IPR008440 |
| CAP160 |
CAP160 repeat | PF07918 | IPR012418 |
| Capsid_NCLDV |
Large eukaryotic DNA virus major capsid protein | PF04451 | IPR007542 |
| Capsule_synth |
Capsule polysaccharide biosynthesis protein | PF05159 | IPR007833 |
| Caps_synth |
Capsular polysaccharide synthesis protein | PF05704 | IPR008441 |
| CAP_C |
DE Adenylate cyclase associated (CAP) C terminal | PF08603 | IPR013912 |
| CAP_GLY |
CAP-Gly domain | PF01302 | IPR000938 |
| CAP_N |
Adenylate cyclase associated (CAP) N terminal | PF01213 | IPR013992 |
| Carboxyl_trans |
Carboxyl transferase domain | PF01039 | IPR000022 |
| CarbpepA_inh |
Carboxypeptidase A inhibitor | PF02977 | IPR004231 |
| Carbpep_Y_N |
Carboxypeptidase Y pro-peptide | PF05388 | IPR008442 |
| Carb_anhydrase |
Eukaryotic-type carbonic anhydrase | PF00194 | IPR001148 |
| Carb_bind |
Carbohydrate binding | PF10645 | IPR018909 |
| Carb_kinase |
Carbohydrate kinase | PF01256 | IPR000631 |
| Carcinustatin |
Carcinustatin peptide | PF08261 | IPR013165 |
| CARD |
Caspase recruitment domain | PF00619 | IPR001315 |
| CARDB |
CARDB | PF07705 | IPR011635 |
| CarD_TRCF |
CarD-like/TRCF domain | PF02559 | IPR003711 |
| Carla_C4 |
Carlavirus putative nucleic acid binding protein | PF01623 | IPR002568 |
| Carmo_coat_C |
Carmovirus coat protein | PF08462 | IPR013669 |
| Carn_acyltransf |
Choline/Carnitine o-acyltransferase | PF00755 | IPR000542 |
| Carot_N |
Orange carotenoid protein, N-terminal | PF09150 | IPR015233 |
| CART |
Cocaine and amphetamine regulated transcript protein (CART) | PF06373 | IPR009106 |
| Cas1p |
Cas1p-like protein | PF07779 | IPR012419 |
| Cas6 |
Cas6 Crispr | PF09559 | IPR014174 |
| Casein |
Casein | PF00363 | IPR001588 |
| Casein_kappa |
Kappa casein | PF00997 | IPR000117 |
| CASP_C |
CASP C terminal | PF08172 | IPR012955 |
| Cast |
RIM-binding protein of the cytomatrix active zone | PF10174 | IPR019323 |
| Cas_APE2256 |
CRISPR-associated protein (Cas_APE2256) | PF09651 | IPR013442 |
| Cas_Cas02710 |
CRISPR-associated protein (Cas_Cas02710) | PF09670 | |
| Cas_Cas2CT1978 |
CRISPR-associated protein (Cas_Cas2CT1978) | PF09707 | IPR010152 |
| Cas_Cas5a |
CRISPR-associated protein (Cas_Cas5a) | PF09705 | |
| Cas_Cas5d |
CRISPR-associated protein (Cas_Cas5d) | PF09704 | IPR021124 |
| Cas_Cas5e |
CRISPR-associated protein (Cas_Cas5e) | PF09708 | |
| Cas_Cmr3 |
CRISPR-associated protein (Cas_Cmr3) | PF09700 | IPR019117 |
| Cas_Cmr5 |
CRISPR-associated protein (Cas_Cmr5) | PF09701 | IPR010160 |
| Cas_Csa4 |
CRISPR-associated protein (Cas_Csa4) | PF09703 | IPR010184 |
| Cas_Csa5 |
CRISPR-associated protein (Cas_Csa5) | PF09702 | IPR010157 |
| Cas_Csd1 |
CRISPR-associated protein (Cas_Csd1) | PF09709 | IPR010144 |
| CAS_CSE1 |
CAS/CSE protein, C-terminus | PF03378 | IPR005043 |
| Cas_Csm6 |
CRISPR-associated protein (Cas_Csm6) | PF09659 | |
| Cas_Csn2 |
CRISPR-associated protein (Cas_Csn2) | PF09711 | IPR010146 |
| Cas_csx3 |
CRISPR-associated protein (Cas_csx3) | PF09620 | IPR013409 |
| Cas_Csx8 |
CRISPR-associated protein Csx8 (Cas_Csx8) | PF09657 | IPR013487 |
| Cas_Csx9 |
CRISPR-associated protein (Cas_Csx9) | PF09658 | IPR013488 |
| Cas_Csy1 |
CRISPR-associated protein (Cas_Csy1) | PF09611 | IPR013397 |
| Cas_Csy2 |
CRISPR-associated protein (Cas_Csy2) | PF09614 | IPR013398 |
| Cas_Csy3 |
CRISPR-associated protein (Cas_Csy3) | PF09615 | IPR013399 |
| Cas_Csy4 |
CRISPR-associated protein (Cas_Csy4) | PF09618 | IPR013396 |
| Cas_CT1975 |
CT1975-like protein | PF09344 | IPR010148 |
| Cas_CXXC_CXXC |
CRISPR-associated protein (Cas_CXXC_CXXC) | PF09706 | IPR019121 |
| Cas_DxTHG |
CRISPR-associated (Cas) DxTHG family | PF09455 | IPR019016 |
| Cas_GSU0053 |
CRISPR-associated protein GSU0053 (Cas_GSU0053) | PF09617 | IPR013403 |
| Cas_GSU0054 |
CRISPR-associated protein, GSU0054 family (Cas_GSU0054) | PF09609 | IPR019089 |
| Cas_NE0113 |
CRISPR-associated protein NE0113 (Cas_NE0113) | PF09623 | IPR019092 |
| Cas_TM1802 |
CRISPR-associated protein TM1802 (cas_TM1802) | PF09484 | IPR013389 |
| Cas_TM1812 |
CRISPR-associated protein (cas_TM1812) | PF09530 | IPR011742 |
| Cas_VVA1548 |
Putative CRISPR-associated protein (Cas_VVA1548) | PF09652 | IPR013443 |
| CAT |
Chloramphenicol acetyltransferase | PF00302 | IPR001707 |
| Catalase |
Catalase | PF00199 | IPR018028 |
| Catalase-rel |
Catalase-related immune-responsive | PF06628 | IPR010582 |
| Cathelicidins |
Cathelicidin | PF00666 | IPR001894 |
| CathepsinC_exc |
Cathepsin C exclusion domain | PF08773 | IPR014882 |
| Cation_ATPase_C |
Cation transporting ATPase, C-terminus | PF00689 | IPR006068 |
| Cation_ATPase_N |
Cation transporter/ATPase, N-terminus | PF00690 | IPR004014 |
| Cation_efflux |
Cation efflux family | PF01545 | IPR002524 |
| CAT_RBD |
CAT RNA binding domain | PF03123 | IPR004341 |
| Caudal_act |
Caudal like protein activation region | PF04731 | IPR006820 |
| Caudo_TAP |
Caudovirales tail fibre assembly protein | PF02413 | IPR003458 |
| Cauli_AT |
Aphid transmission protein | PF03233 | IPR004917 |
| Cauli_DNA-bind |
Caulimovirus DNA-binding protein | PF03310 | IPR004986 |
| Cauli_VI |
Caulimovirus viroplasmin | PF01693 | IPR011320 |
| Caveolin |
Caveolin | PF01146 | IPR001612 |
| CAV_VP3 |
Chicken anaemia virus VP-3 protein | PF04771 | IPR006858 |
| Ca_channel_B |
Dihydropyridine sensitive L-type calcium channel (Beta subunit) | PF00774 | |
| Ca_chan_IQ |
Voltage gated calcium channel IQ domain | PF08763 | IPR014873 |
| CBAH |
Linear amide C-N hydrolases, choloylglycine hydrolase family | PF02275 | IPR003199 |
| Cbb3_Q_epsi |
Cytochrome c oxidase cbb3-type (Cbb3_Q_epsi) | PF09672 | |
| CbbQ_C |
CbbQ/NirQ/NorQ C-terminal | PF08406 | IPR013615 |
| CBF |
CBF/Mak21 family | PF03914 | IPR005612 |
| CBFB_NFYA |
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | PF02045 | IPR001289 |
| CBFD_NFYB_HMF |
Histone-like transcription factor (CBF/NF-Y) and archaeal histone | PF00808 | IPR003958 |
| CBFNT |
CBFNT (NUC161) domain | PF08143 | IPR012956 |
| CBF_beta |
Core binding factor beta subunit | PF02312 | IPR003417 |
| CbiA |
CobQ/CobB/MinD/ParA nucleotide binding domain | PF01656 | IPR002586 |
| CbiC |
Precorrin-8X methylmutase | PF02570 | IPR003722 |
| CbiD |
CbiD | PF01888 | IPR002748 |
| CbiG |
CbiG | PF01890 | IPR002750 |
| CbiJ |
Precorrin-6x reductase CbiJ/CobK | PF02571 | IPR003723 |
| CbiK |
Cobalt chelatase (CbiK) | PF06180 | IPR010388 |
| CbiM |
Cobalt uptake substrate-specific transmembrane region | PF01891 | IPR002751 |
| CbiN |
Cobalt transport protein component CbiN | PF02553 | IPR003705 |
| CbiQ |
Cobalt transport protein | PF02361 | IPR003339 |
| CbiX |
CbiX | PF01903 | IPR002762 |
| CbiZ |
Adenosylcobinamide amidohydrolase | PF01955 | IPR002808 |
| CblD |
CblD like pilus biogenesis initiator | PF07434 | IPR010888 |
| Cbl_N |
CBL proto-oncogene N-terminal domain 1 | PF02262 | IPR003153 |
| Cbl_N2 |
CBL proto-oncogene N-terminus, EF hand-like domain | PF02761 | IPR014741 |
| Cbl_N3 |
CBL proto-oncogene N-terminus, SH2-like domain | PF02762 | IPR014742 |
| CBM27 |
Carbohydrate binding module 27 | PF09212 | IPR015295 |
| CBM49 |
Carbohydrate binding domain CBM49 | PF09478 | IPR019028 |
| CBM_1 |
Fungal cellulose binding domain | PF00734 | IPR000254 |
| CBM_10 |
Cellulose or protein binding domain | PF02013 | IPR002883 |
| CBM_11 |
Carbohydrate binding domain (family 11) | PF03425 | IPR005087 |
| CBM_14 |
Chitin binding Peritrophin-A domain | PF01607 | IPR002557 |
| CBM_15 |
Carbohydrate binding domain (family 15) | PF03426 | IPR005088 |
| CBM_17_28 |
Carbohydrate binding domain (family 17/28) | PF03424 | IPR005086 |
| CBM_19 |
Carbohydrate binding domain (family 19) | PF03427 | IPR005089 |
| CBM_2 |
Cellulose binding domain | PF00553 | IPR001919 |
| CBM_20 |
Starch binding domain | PF00686 | IPR002044 |
| CBM_21 |
Putative phosphatase regulatory subunit | PF03370 | IPR005036 |
| CBM_25 |
Carbohydrate binding domain (family 25) | PF03423 | IPR005085 |
| CBM_3 |
Cellulose binding domain | PF00942 | IPR001956 |
| CBM_48 |
Carbohydrate-binding module 48 (Isoamylase N-terminal domain) | PF02922 | IPR004193 |
| CBM_4_9 |
Carbohydrate binding domain | PF02018 | IPR003305 |
| CBM_5_12 |
Carbohydrate binding domain | PF02839 | IPR003610 |
| CBM_6 |
Carbohydrate binding module (family 6) | PF03422 | IPR005084 |
| CBM_X |
Putative carbohydrate binding domain | PF06204 | IPR009342 |
| CBP4 |
CBP4 | PF07960 | IPR012420 |
| CBS |
CBS domain pair | PF00571 | IPR000644 |
| CbtA |
Probable cobalt transporter subunit (CbtA) | PF09490 | |
| CbtB |
Probable cobalt transporter subunit (CbtB) | PF09489 | IPR012667 |
| CC |
CC domain | PF04942 | IPR007026 |
| CCD |
WisP family C-Terminal Region | PF07860 | IPR012421 |
| CcdA |
Post-segregation antitoxin CcdA | PF07362 | IPR009956 |
| CcdB |
CcdB protein | PF01845 | IPR002712 |
| CCG |
Cysteine-rich domain | PF02754 | IPR004017 |
| CcmB |
CcmB protein | PF03379 | IPR003544 |
| CcmD |
Heme exporter protein D (CcmD) | PF04995 | IPR007078 |
| CcmE |
CcmE | PF03100 | IPR004329 |
| CcmH |
Cytochrome C biogenesis protein | PF03918 | IPR005616 |
| CcoS |
Cytochrome oxidase maturation protein cbb3-type | PF03597 | IPR004714 |
| CCP_MauG |
Di-haem cytochrome c peroxidase | PF03150 | IPR004852 |
| CCT |
CCT motif | PF06203 | IPR010402 |
| CCT_2 |
Divergent CCT motif | PF09425 | IPR018467 |
| CD20 |
CD20/IgE Fc receptor beta subunit family | PF04103 | IPR007237 |
| CD225 |
Interferon-induced transmembrane protein | PF04505 | IPR007593 |
| CD34_antigen |
CD34/Podocalyxin family | PF06365 | IPR013836 |
| CD36 |
CD36 family | PF01130 | IPR002159 |
| CD4-extracel |
CD4, extracellular | PF09191 | IPR015274 |
| CD47 |
CD47 transmembrane region | PF04549 | IPR013147 |
| CDC13-DNA-bind |
CDC13, ssDNA binding | PF09283 | |
| CDC14 |
Cell division control protein 14, SIN component | PF08045 | IPR012535 |
| CDC24 |
CDC24 Calponin | PF06395 | IPR010481 |
| CDC27 |
DNA polymerase subunit Cdc27 | PF09507 | IPR019038 |
| CDC37_C |
Cdc37 C terminal domain | PF08564 | IPR013873 |
| CDC37_M |
Cdc37 Hsp90 binding domain | PF08565 | IPR013874 |
| CDC37_N |
Cdc37 N terminal kinase binding | PF03234 | IPR013855 |
| CDC45 |
CDC45-like protein | PF02724 | IPR003874 |
| CDC48_2 |
Cell division protein 48 (CDC48), domain 2 | PF02933 | IPR004201 |
| CDC48_N |
Cell division protein 48 (CDC48), N-terminal domain | PF02359 | IPR003338 |
| CDC50 |
LEM3 (ligand-effect modulator 3) family / CDC50 family | PF03381 | IPR005045 |
| Cdc6_C |
CDC6, C terminal | PF09079 | IPR015163 |
| CDC73 |
RNA pol II accessory factor, Cdc73 family | PF05179 | IPR007852 |
| CdCA1 |
Cadmium carbonic anhydrase repeat | PF10563 | IPR018883 |
| CDH |
CDP-diacylglycerol pyrophosphatase | PF02611 | IPR003763 |
| CdhC |
CO dehydrogenase/acetyl-CoA synthase complex beta subunit | PF03598 | IPR004461 |
| CdhD |
CO dehydrogenase/acetyl-CoA synthase delta subunit | PF03599 | IPR016041 |
| CDI |
Cyclin-dependent kinase inhibitor | PF02234 | IPR003175 |
| CDK2AP |
Cyclin-dependent kinase 2-associated protein | PF09806 | IPR019187 |
| CDK5_activator |
Cyclin-dependent kinase 5 activator protein | PF03261 | IPR004944 |
| CDKN3 |
Cyclin-dependent kinase inhibitor 3 (CDKN3) | PF05706 | |
| CDO_I |
Cysteine dioxygenase type I | PF05995 | IPR010300 |
| CDP-OH_P_transf |
CDP-alcohol phosphatidyltransferase | PF01066 | IPR000462 |
| CDP-OH_P_tran_2 |
CDP-alcohol phosphatidyltransferase 2 | PF08009 | IPR012616 |
| CDRN |
Cysteine-rich D. radiodurans N terminus | PF05174 | IPR007847 |
| CDT1 |
DNA replication factor CDT1 like | PF08839 | IPR014939 |
| CDtoxinA |
Cytolethal distending toxin A/C family | PF03498 | IPR003558 |
| Cecropin |
Cecropin family | PF00272 | IPR000875 |
| CedA |
Cell division activator CedA | PF10729 | IPR019666 |
| CelD_N |
N-terminal ig-like domain of cellulase | PF02927 | IPR004197 |
| Cellsynth_D |
Cellulose synthase subunit D | PF03500 | |
| Cellulase |
Cellulase (glycosyl hydrolase family 5) | PF00150 | IPR001547 |
| Cellulose_synt |
Cellulose synthase | PF03552 | IPR005150 |
| CemA |
CemA family | PF03040 | IPR004282 |
| Cementoin |
Trappin protein transglutaminase binding domain | PF10511 | IPR019541 |
| Cenp-B_dimeris |
Centromere protein B dimerisation domain | PF09026 | IPR015115 |
| CENP-B_N |
CENP-B N-terminal DNA-binding domain | PF04218 | IPR006695 |
| Cenp-F_leu_zip |
Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 | PF10473 | IPR019513 |
| Cenp-F_N |
Cenp-F N-terminal domain | PF10481 | IPR018463 |
| CENP-H |
Centromere protein H (CENP-H) | PF05837 | IPR008426 |
| Cenp-O |
Cenp-O kinetochore centromere component | PF09496 | IPR018464 |
| CenpB-DNA-bind |
Centromere binding protein B, DNA binding | PF09091 | |
| CEP1-DNA_bind |
CEP-1, DNA binding | PF09287 | IPR015367 |
| Ceramidase_alk |
Neutral/alkaline non-lysosomal ceramidase | PF04734 | |
| Cerato-platanin |
Cerato-platanin | PF07249 | IPR010829 |
| CesT |
Tir chaperone protein (CesT) | PF05932 | IPR010261 |
| CfAFP |
Choristoneura fumiferana antifreeze protein (CfAFP) | PF05264 | IPR007928 |
| CFC |
Cripto_Frl-1_Cryptic (CFC) | PF09443 | IPR019011 |
| CFEM |
CFEM domain | PF05730 | IPR008427 |
| CG-1 |
CG-1 domain | PF03859 | IPR005559 |
| Cg6151-P |
Uncharacterized conserved protein CG6151-P | PF10233 | IPR019365 |
| CGGC |
CGGC domain | PF08821 | IPR014925 |
| CGI-121 |
Kinase binding protein CGI-121 | PF08617 | IPR013926 |
| Cgr1 |
Cgr1 family | PF03879 | IPR005579 |
| CgtA |
Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) | PF06306 | IPR010446 |
| CH |
Calponin homology (CH) domain | PF00307 | IPR001715 |
| ChaB |
ChaB | PF06150 | IPR009317 |
| ChaC |
ChaC-like protein | PF04752 | IPR006840 |
| CHAD |
CHAD domain | PF05235 | IPR007899 |
| Chagasin_I42 |
Chagasin peptidase inhibitor I42 | PF09394 | IPR018990 |
| Chalcone |
Chalcone-flavanone isomerase | PF02431 | IPR003466 |
| Chal_sti_synt_C |
Chalcone and stilbene synthases, C-terminal domain | PF02797 | IPR012328 |
| Chal_sti_synt_N |
Chalcone and stilbene synthases, N-terminal domain | PF00195 | IPR001099 |
| Channel_Tsx |
Nucleoside-specific channel-forming protein, Tsx | PF03502 | IPR018013 |
| CHAP |
CHAP domain | PF05257 | IPR007921 |
| chaperone_DMP |
20S proteasome chaperone | PF10448 | IPR018854 |
| Chaperone_III |
Type III secretion chaperone domain | PF07824 | IPR013095 |
| ChAPs |
ChAPs (Chs5p-Arf1p-binding proteins) | PF09295 | IPR015374 |
| CHASE |
CHASE domain | PF03924 | IPR006189 |
| CHASE2 |
CHASE2 domain | PF05226 | IPR007890 |
| CHASE3 |
CHASE3 domain | PF05227 | IPR007891 |
| CHASE4 |
CHASE4 domain | PF05228 | IPR007892 |
| CHB_HEX |
Putative carbohydrate binding domain | PF03173 | IPR004866 |
| CHB_HEX_C |
Chitobiase/beta-hexosaminidase C-terminal domain | PF03174 | IPR004867 |
| CHCH |
CHCH domain | PF06747 | IPR010625 |
| CHD5 |
CHD5-like protein | PF04420 | IPR007514 |
| CHDCT2 |
CHDCT2 (NUC038) domain | PF08074 | IPR012957 |
| CHDNT |
CHDNT (NUC034) domain | PF08073 | IPR012958 |
| CheB_methylest |
CheB methylesterase | PF01339 | IPR000673 |
| CheC |
CheC-like family | PF04509 | IPR007597 |
| CheD |
CheD | PF03975 | IPR005659 |
| CheR |
CheR methyltransferase, SAM binding domain | PF01739 | IPR022642 |
| CheR_N |
CheR methyltransferase, all-alpha domain | PF03705 | IPR022641 |
| CheW |
CheW-like domain | PF01584 | IPR002545 |
| CheY-binding |
CheY binding | PF09078 | IPR015162 |
| CheZ |
Chemotaxis phosphatase, CheZ | PF04344 | IPR007439 |
| CHGN |
Chondroitin N-acetylgalactosaminyltransferase | PF05679 | IPR008428 |
| ChiC |
Chitinase C | PF06483 | IPR009470 |
| ChitinaseA_N |
Chitinase A, N-terminal domain | PF08329 | IPR013540 |
| Chitin_bind_1 |
Chitin recognition protein | PF00187 | IPR001002 |
| Chitin_bind_3 |
Chitin binding domain | PF03067 | IPR004302 |
| Chitin_bind_4 |
Insect cuticle protein | PF00379 | IPR000618 |
| Chitin_synth_1 |
Chitin synthase | PF01644 | IPR004834 |
| Chitin_synth_1N |
Chitin synthase N-terminal | PF08407 | IPR013616 |
| Chitin_synth_2 |
Chitin synthase | PF03142 | IPR004835 |
| Chitosanase |
Fungal chitosanase | PF07335 | IPR009939 |
| CHL4 |
Kinetochore protein CHL4 like | PF05238 | IPR007902 |
| ChlamPMP_M |
Chlamydia polymorphic membrane protein middle domain | PF07548 | IPR011427 |
| Chlamy_scaf |
Chlamydia-phage Chp2 scaffold (Chlamy_scaf) | PF09675 | IPR014131 |
| Chlam_OMP |
Chlamydia major outer membrane protein | PF01308 | IPR000604 |
| Chlam_OMP3 |
Chlamydia cysteine-rich outer membrane protein 3 | PF03503 | IPR003517 |
| Chlam_OMP6 |
Chlamydia cysteine-rich outer membrane protein 6 | PF03504 | IPR003506 |
| Chlam_PMP |
Chlamydia polymorphic membrane protein (Chlamydia_PMP) | PF02415 | IPR003368 |
| Chlam_vir |
Chlamydia virulence protein PGP3-D | PF05475 | IPR008444 |
| Chloroa_b-bind |
Chlorophyll A-B binding protein | PF00504 | |
| Chlorophyllase |
Chlorophyllase | PF07224 | IPR010821 |
| Chlorovi_GP_rpt |
Chlorovirus glycoprotein repeat | PF06598 | IPR010568 |
| Chlor_dismutase |
Chlorite dismutase | PF06778 | IPR010644 |
| CHMI |
5-carboxymethyl-2-hydroxymuconate isomerase | PF02962 | IPR004220 |
| CholecysA-Rec_N |
Cholecystokinin A receptor, N-terminal | PF09193 | IPR015276 |
| Choline_kinase |
Choline/ethanolamine kinase | PF01633 | IPR002573 |
| Choline_kin_N |
Choline kinase N terminus | PF04428 | IPR007521 |
| Chol_subst-bind |
Cholesterol oxidase, substrate-binding | PF09129 | IPR015213 |
| Chon_Sulph_att |
Chondroitin sulphate attachment domain | PF06566 | IPR010555 |
| CHORD |
CHORD | PF04968 | IPR007051 |
| Chordopox_A13L |
Chordopoxvirus A13L protein | PF05961 | IPR009236 |
| Chordopox_A15 |
Chordopoxvirus A15 protein | PF05846 | IPR008445 |
| Chordopox_A20R |
Chordopoxvirus A20R protein | PF05941 | IPR010267 |
| Chordopox_A30L |
Chordopoxvirus A30L protein | PF06015 | IPR009257 |
| Chordopox_A33R |
Chordopoxvirus A33R protein | PF05966 | IPR009238 |
| Chordopox_A35R |
Chordopoxvirus A35R protein | PF05989 | IPR009247 |
| Chordopox_E11 |
Chordopoxvirus E11 protein | PF06138 | IPR009201 |
| Chordopox_G2 |
Chordopoxvirus protein G2 | PF05796 | IPR008446 |
| Chordopox_G3 |
Chordopoxvirus G3 protein | PF06129 | IPR010367 |
| Chordopox_L2 |
Chordopoxvirus L2 protein | PF05803 | IPR008447 |
| Chordopox_RPO7 |
Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) | PF05864 | IPR008448 |
| Chorion_1 |
Chorion protein | PF01723 | IPR002635 |
| Chorion_2 |
Chorion family 2 | PF03964 | IPR005649 |
| Chorion_3 |
Chorion family 3 | PF05387 | |
| Chorion_S16 |
Chorion protein S16 | PF05836 | IPR008450 |
| Chorismate_bind |
chorismate binding enzyme | PF00425 | IPR015890 |
| Chorismate_synt |
Chorismate synthase | PF01264 | IPR000453 |
| Chor_lyase |
Chorismate lyase | PF04345 | IPR007440 |
| ChpXY |
CO2 hydration protein (ChpXY) | PF10216 | IPR010220 |
| CHRD |
CHRD domain | PF07452 | IPR010895 |
| Chromadorea_ALT |
Chromadorea ALT protein | PF05535 | IPR008451 |
| Chromate_transp |
Chromate transporter | PF02417 | IPR003370 |
| Chrome_Resist |
Chromate resistance exported protein | PF09828 | IPR018634 |
| Chromo |
'chromo' (CHRromatin Organisation MOdifier) domain | PF00385 | IPR000953 |
| Chromo_shadow |
Chromo shadow domain | PF01393 | IPR008251 |
| Churchill |
Churchill protein | PF06573 | IPR009508 |
| ChW |
Clostridial hydrophobic W | PF07538 | IPR006637 |
| CHZ |
Histone chaperone domain CHZ | PF09649 | IPR019098 |
| CI-B14_5a |
NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) | PF07347 | IPR009947 |
| CIA30 |
Complex I intermediate-associated protein 30 (CIA30) | PF08547 | IPR013857 |
| Cid2 |
Caffeine-induced death protein 2 | PF09774 | IPR019171 |
| CIDE-N |
CIDE-N domain | PF02017 | IPR003508 |
| cIII |
cIII protein family | PF08134 | IPR012995 |
| CIMR |
Cation-independent mannose-6-phosphate receptor repeat | PF00878 | IPR000479 |
| CinA |
Competence-damaged protein | PF02464 | IPR008136 |
| Circo_capsid |
Circovirus capsid protein | PF02443 | IPR003383 |
| Cir_Bir_Yir |
Plasmodium variant antigen protein Cir/Yir/Bir | PF06022 | IPR006477 |
| Cir_N |
N-terminal domain of CBF1 interacting co-repressor CIR | PF10197 | IPR019339 |
| CitD |
Citrate lyase, gamma subunit | PF04953 | |
| CITED |
CITED | PF04487 | IPR007576 |
| CitF |
Citrate lyase, alpha subunit (CitF) | PF04223 | IPR006472 |
| CitG |
ATP:dephospho-CoA triphosphoribosyl transferase | PF01874 | IPR002736 |
| CitMHS |
Citrate transporter | PF03600 | IPR004680 |
| Citrate_ly_lig |
Citrate lyase ligase C-terminal domain | PF08218 | IPR013166 |
| Citrate_synt |
Citrate synthase | PF00285 | IPR002020 |
| Citrus_P18 |
Citrus tristeza virus P18 protein | PF05520 | IPR008452 |
| CitX |
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase | PF03802 | IPR005551 |
| CKS |
Cyclin-dependent kinase regulatory subunit | PF01111 | IPR000789 |
| CK_II_beta |
Casein kinase II regulatory subunit | PF01214 | IPR000704 |
| CLAG |
Cytoadherence-linked asexual protein | PF03805 | IPR005553 |
| Class_IIIsignal |
Class III signal peptide | PF04021 | IPR007166 |
| Clathrin |
Region in Clathrin and VPS | PF00637 | |
| Clathrin-link |
Clathrin, heavy-chain linker | PF09268 | IPR015348 |
| Clathrin_lg_ch |
Clathrin light chain | PF01086 | IPR000996 |
| Clathrin_propel |
Clathrin propeller repeat | PF01394 | IPR022365 |
| Clat_adaptor_s |
Clathrin adaptor complex small chain | PF01217 | |
| Clavanin |
Clavanin | PF05452 | IPR008453 |
| Clc-like |
Clc-like | PF07062 | IPR010761 |
| CLCA_N |
Calcium-activated chloride channel | PF08434 | IPR013642 |
| Cleaved_Adhesin |
Cleaved Adhesin Domain | PF07675 | IPR011628 |
| Clenterotox |
Clostridium enterotoxin | PF03505 | IPR003897 |
| CLN3 |
CLN3 protein | PF02487 | IPR003492 |
| Cloacin |
Cloacin | PF03515 | IPR003058 |
| Cloacin_immun |
Cloacin immunity protein | PF03513 | IPR003063 |
| Closter_coat |
Closterovirus coat protein | PF01785 | IPR002679 |
| Clostridium_P47 |
Clostridium P-47 protein | PF06597 | IPR010567 |
| Clp1 |
Pre-mRNA cleavage complex II protein Clp1 | PF06807 | IPR010655 |
| ClpB_D2-small |
C-terminal, D2-small domain, of ClpB protein | PF10431 | IPR019489 |
| ClpS |
ATP-dependent Clp protease adaptor protein ClpS | PF02617 | IPR003769 |
| CLPTM1 |
Cleft lip and palate transmembrane protein 1 (CLPTM1) | PF05602 | IPR008429 |
| Clp_N |
Clp amino terminal domain | PF02861 | IPR004176 |
| CLP_protease |
Clp protease | PF00574 | IPR001907 |
| Clr2 |
Transcription-silencing protein Clr2 | PF10383 | IPR018839 |
| Cluap1 |
Clusterin-associated protein-1 | PF10234 | IPR019366 |
| Clusterin |
Clusterin | PF01093 | IPR000753 |
| CM1 |
Influenza C virus M1 protein | PF03026 | IPR004271 |
| CM2 |
Influenza C virus M2 protein | PF03021 | IPR004267 |
| CMAS |
Cyclopropane-fatty-acyl-phospholipid synthase | PF02353 | IPR003333 |
| Cmc1 |
Cytochrome c oxidase biogenesis protein Cmc1 like | PF08583 | IPR013892 |
| CmcH_NodU |
Carbamoyltransferase | PF02543 | IPR003696 |
| CmcI |
Cephalosporin hydroxylase | PF04989 | IPR007072 |
| CMD |
Carboxymuconolactone decarboxylase family | PF02627 | IPR003779 |
| CMV_US |
CMV US | PF08001 | IPR012536 |
| Cmyb_C |
C-myb, C-terminal | PF09316 | IPR015395 |
| CM_1 |
Chorismate mutase type I | PF07736 | IPR008243 |
| CM_2 |
Chorismate mutase type II | PF01817 | IPR020822 |
| Cm_res_leader |
Chloramphenicol resistance gene leader peptide | PF08077 | IPR012537 |
| Cna_B |
Cna protein B-type domain | PF05738 | IPR008454 |
| CNF1 |
Rho-activating domain of cytotoxic necrotizing factor | PF05785 | IPR008430 |
| CNH |
CNH domain | PF00780 | IPR001180 |
| Cnl2_NKP2 |
Cnl2/NKP2 family protein | PF09447 | IPR018565 |
| cNMP_binding |
Cyclic nucleotide-binding domain | PF00027 | IPR000595 |
| CNP1 |
CNP1-like family | PF08750 | IPR014861 |
| CNPase |
2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) | PF05881 | IPR008431 |
| CNTF |
Ciliary neurotrophic factor | PF01110 | IPR000151 |
| CN_hydrolase |
Carbon-nitrogen hydrolase | PF00795 | IPR003010 |
| CoaE |
Dephospho-CoA kinase | PF01121 | IPR001977 |
| Coagulase |
Staphylococcus aureus coagulase | PF08764 | IPR014874 |
| Coagulin |
Coagulin | PF02035 | IPR000275 |
| Coatamer_beta_C |
Coatamer beta C-terminal region | PF07718 | IPR011710 |
| CoatB |
Bacteriophage coat protein B | PF10389 | IPR019463 |
| Coatomer_E |
Coatomer epsilon subunit | PF04733 | IPR006822 |
| Coatomer_WDAD |
Coatomer WD associated region | PF04053 | IPR006692 |
| Coat_F |
Coat F domain | PF07875 | IPR012851 |
| Coat_X |
Spore Coat Protein X and V domain | PF07552 | IPR011428 |
| CoA_binding |
CoA binding domain | PF02629 | IPR003781 |
| CoA_trans |
Coenzyme A transferase | PF01144 | IPR004165 |
| CoA_transf_3 |
CoA-transferase family III | PF02515 | IPR003673 |
| Cobalamin_bind |
Eukaryotic cobalamin-binding protein | PF01122 | IPR002157 |
| CobA_CobO_BtuR |
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | PF02572 | IPR003724 |
| CobD_Cbib |
CobD/Cbib protein | PF03186 | IPR004485 |
| Cobl |
Cordon-bleu domain | PF09469 | IPR019025 |
| CobN-Mg_chel |
CobN/Magnesium Chelatase | PF02514 | IPR003672 |
| COBRA |
COBRA-like protein | PF04833 | IPR006918 |
| COBRA1 |
Cofactor of BRCA1 (COBRA1) | PF06209 | IPR010405 |
| CobS |
Cobalamin-5-phosphate synthase | PF02654 | IPR003805 |
| CobT |
Cobalamin biosynthesis protein CobT | PF06213 | IPR006538 |
| CobU |
Cobinamide kinase / cobinamide phosphate guanyltransferase | PF02283 | IPR003203 |
| cobW |
CobW/HypB/UreG, nucleotide-binding domain | PF02492 | IPR003495 |
| CobW_C |
Cobalamin synthesis protein cobW C-terminal domain | PF07683 | IPR011629 |
| Cob_adeno_trans |
Cobalamin adenosyltransferase | PF01923 | IPR002779 |
| CodY |
CodY GAF-like domain | PF06018 | IPR010312 |
| COesterase |
Carboxylesterase | PF00135 | IPR002018 |
| Cofilin_ADF |
Cofilin/tropomyosin-type actin-binding protein | PF00241 | IPR002108 |
| COG2 |
COG (conserved oligomeric Golgi) complex component, COG2 | PF06148 | IPR009316 |
| COG4 |
COG4 transport protein | PF08318 | IPR013167 |
| COG5 |
Golgi transport complex subunit 5 | PF10392 | IPR019465 |
| COG6 |
Conserved oligomeric complex COG6 | PF06419 | IPR010490 |
| COG7 |
Golgi complex component 7 (COG7) | PF10191 | IPR019335 |
| Cohesin |
Cohesin domain | PF00963 | IPR002102 |
| Cohesin_load |
Cohesin loading factor | PF10345 | IPR019440 |
| CoiA |
Competence protein CoiA-like family | PF06054 | IPR010330 |
| Coiled |
Coiled coil | PF05710 | IPR008455 |
| Coiled-coil_56 |
Coiled-coil domain-containing protein 56 | PF09813 | IPR018628 |
| Coil_helix |
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 | PF09800 | |
| Coleoptericin |
Coleoptericin | PF06286 | IPR009382 |
| COLFI |
Fibrillar collagen C-terminal domain | PF01410 | IPR000885 |
| Colicin |
Colicin pore forming domain | PF01024 | IPR000293 |
| ColicinD |
Colicin D | PF09204 | IPR015287 |
| Colicin_im |
Colicin immunity protein | PF03857 | IPR005557 |
| Colicin_Pyocin |
Colicin immunity protein / pyocin immunity protein | PF01320 | IPR000290 |
| Colicin_V |
Colicin V production protein | PF02674 | IPR003825 |
| Colipase |
Colipase, N-terminal domain | PF01114 | IPR017913 |
| Colipase_C |
Colipase, C-terminal domain | PF02740 | IPR017914 |
| Collagen |
Collagen triple helix repeat (20 copies) | PF01391 | IPR008160 |
| Collagen_bind |
Collagen binding domain | PF05737 | IPR008456 |
| Collar |
Phage Tail Collar Domain | PF07484 | IPR011083 |
| Col_cuticle_N |
Nematode cuticle collagen N-terminal domain | PF01484 | IPR002486 |
| ComA |
(2R)-phospho-3-sulfolactate synthase (ComA) | PF02679 | IPR003830 |
| ComC |
COMC family | PF03047 | IPR004288 |
| ComFB |
Late competence development protein ComFB | PF10719 | IPR019657 |
| ComK |
ComK protein | PF06338 | IPR010461 |
| Como_LCP |
Large coat protein | PF02247 | IPR003181 |
| Como_SCP |
Small coat protein | PF02248 | IPR003182 |
| Competence |
Competence protein | PF03772 | IPR004477 |
| Complex1_24kDa |
Respiratory-chain NADH dehydrogenase 24 Kd subunit | PF01257 | IPR002023 |
| Complex1_30kDa |
Respiratory-chain NADH dehydrogenase, 30 Kd subunit | PF00329 | IPR001268 |
| Complex1_49kDa |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit | PF00346 | IPR001135 |
| Complex1_51K |
Respiratory-chain NADH dehydrogenase 51 Kd subunit | PF01512 | IPR011538 |
| Complex1_LYR |
Complex 1 protein (LYR family) | PF05347 | IPR008011 |
| ComX |
Bacillus competence pheromone ComX | PF05952 | IPR009233 |
| Con-6 |
Conidiation protein 6 | PF10346 | IPR018824 |
| Condensation |
Condensation domain | PF00668 | IPR001242 |
| Connexin |
Connexin | PF00029 | IPR013092 |
| Connexin43 |
Gap junction alpha-1 protein (Cx43) | PF03508 | IPR013124 |
| Connexin50 |
Gap junction alpha-8 protein (Cx50) | PF03509 | IPR002266 |
| Connexin_CCC |
Gap junction channel protein cysteine-rich domain | PF10582 | IPR019570 |
| Conotoxin |
Conotoxin | PF02950 | IPR004214 |
| Cons_hypoth698 |
Conserved hypothetical protein 698 | PF03601 | IPR018383 |
| Cons_hypoth95 |
Conserved hypothetical protein 95 | PF03602 | IPR004398 |
| CopB |
Copper resistance protein B precursor (CopB) | PF05275 | IPR007939 |
| CopC |
Copper resistance protein CopC | PF04234 | IPR007348 |
| CopD |
Copper resistance protein D | PF05425 | IPR008457 |
| Copine |
Copine | PF07002 | IPR010734 |
| COPI_assoc |
COPI associated protein | PF08507 | IPR013714 |
| COPI_C |
Coatomer (COPI) alpha subunit C-terminus | PF06957 | IPR010714 |
| Copper-bind |
Copper binding proteins, plastocyanin/azurin family | PF00127 | IPR000923 |
| Copper-fist |
Copper fist DNA binding domain | PF00649 | IPR001083 |
| Coprinus_mating |
Coprinus cinereus mating-type protein | PF05920 | IPR008422 |
| Coprogen_oxidas |
Coproporphyrinogen III oxidase | PF01218 | IPR001260 |
| Coq4 |
Coenzyme Q (ubiquinone) biosynthesis protein Coq4 | PF05019 | IPR007715 |
| COQ7 |
Ubiquinone biosynthesis protein COQ7 | PF03232 | IPR011566 |
| COQ9 |
COQ9 | PF08511 | IPR013718 |
| Cor1 |
Cor1/Xlr/Xmr conserved region | PF04803 | IPR006888 |
| CorA |
CorA-like Mg2+ transporter protein | PF01544 | IPR002523 |
| CorC_HlyC |
Transporter associated domain | PF03471 | IPR005170 |
| Cornichon |
Cornichon protein | PF03311 | IPR003377 |
| Cornifin |
Cornifin (SPRR) family | PF02389 | IPR003302 |
| Coronavirus_5 |
Coronavirus gene 5 protein | PF05528 | IPR008458 |
| Coronavirus_NS4 |
Coronavirus nonstructural protein 4 | PF05780 | |
| Corona_3 |
Coronavirus ORF3 protein | PF04694 | IPR006784 |
| Corona_5a |
Coronavirus 5a protein | PF06336 | IPR009404 |
| Corona_6B_7B |
Coronavirus 6B/7B protein | PF03262 | IPR004945 |
| Corona_7 |
Coronavirus protein 7 | PF02398 | IPR003449 |
| Corona_I |
Corona nucleocapsid I protein | PF03187 | IPR004876 |
| Corona_M |
Coronavirus M matrix/glycoprotein | PF01635 | IPR002574 |
| Corona_NS1 |
Coronavirus nonstructural protein NS1 | PF06145 | IPR009314 |
| Corona_NS2 |
Coronavirus non-structural protein NS2 | PF04753 | IPR006841 |
| Corona_NS2A |
Coronavirus NS2A protein | PF05213 | |
| Corona_NS3b |
ORF3b coronavirus protein | PF03053 | IPR004293 |
| Corona_NS4 |
Coronavirus non-structural protein NS4 | PF03905 | IPR005603 |
| Corona_nucleoca |
Coronavirus nucleocapsid protein | PF00937 | IPR001218 |
| Corona_RPol_N |
Coronavirus RPol N-terminus | PF06478 | IPR009469 |
| Corona_S1 |
Coronavirus S1 glycoprotein | PF01600 | IPR002551 |
| Corona_S2 |
Coronavirus S2 glycoprotein | PF01601 | IPR002552 |
| CortBP2 |
Cortactin-binding protein-2 | PF09727 | IPR019131 |
| Cortex-I_coil |
Cortexillin I, coiled coil | PF09304 | IPR015383 |
| CotE |
Outer spore coat protein E (CotE) | PF10628 | IPR018901 |
| CotH |
CotH protein | PF08757 | IPR014867 |
| COX1 |
Cytochrome C and Quinol oxidase polypeptide I | PF00115 | IPR000883 |
| COX15-CtaA |
Cytochrome oxidase assembly protein | PF02628 | IPR003780 |
| COX17 |
Cytochrome C oxidase copper chaperone (COX17) | PF05051 | IPR007745 |
| COX2 |
Cytochrome C oxidase subunit II, periplasmic domain | PF00116 | IPR002429 |
| COX2-transmemb |
Cytochrome C oxidase subunit II, transmembrane | PF09125 | IPR015209 |
| COX2_TM |
Cytochrome C oxidase subunit II, transmembrane domain | PF02790 | IPR011759 |
| COX3 |
Cytochrome c oxidase subunit III | PF00510 | IPR000298 |
| COX4 |
Cytochrome c oxidase subunit IV | PF02936 | IPR004203 |
| COX4_pro |
Prokaryotic Cytochrome C oxidase subunit IV | PF03626 | IPR005171 |
| COX4_pro_2 |
Bacterial aa3 type cytochrome c oxidase subunit IV | PF07835 | IPR012422 |
| COX5A |
Cytochrome c oxidase subunit Va | PF02284 | IPR003204 |
| COX5B |
Cytochrome c oxidase subunit Vb | PF01215 | IPR002124 |
| COX5C |
Cytochrome c oxidase subunit Vc (COX5C) | PF05799 | IPR008432 |
| COX6A |
Cytochrome c oxidase subunit VIa | PF02046 | IPR001349 |
| COX6B |
Cytochrome oxidase c subunit VIb | PF02297 | IPR003213 |
| COX6C |
Cytochrome c oxidase subunit VIc | PF02937 | IPR004204 |
| COX7a |
Cytochrome c oxidase subunit VIIa | PF02238 | IPR003177 |
| COX7B |
Cytochrome C oxidase chain VIIB | PF05392 | IPR008433 |
| COX7C |
Cytochrome c oxidase subunit VIIc | PF02935 | |
| COX8 |
Cytochrome oxidase c subunit VIII | PF02285 | IPR003205 |
| COX9 |
Cytochrome c oxidase subunit COX9 | PF09576 | IPR014368 |
| COXG |
Carbon monoxide dehydrogenase subunit G (CoxG) | PF06240 | IPR010419 |
| CoxIIa |
Cytochrome c oxidase subunit IIa family | PF08113 | IPR012538 |
| COX_ARM |
COX Aromatic Rich Motif | PF06481 | IPR010514 |
| CO_deh_flav_C |
CO dehydrogenase flavoprotein C-terminal domain | PF03450 | IPR005107 |
| CO_dh |
CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit | PF02552 | IPR003704 |
| CP12 |
CP12 domain | PF02672 | IPR003823 |
| CP2 |
CP2 transcription factor | PF04516 | IPR007604 |
| CpcD |
CpcD/allophycocyanin linker domain | PF01383 | IPR008213 |
| CPDase |
Cyclic phosphodiesterase-like protein | PF07823 | IPR012386 |
| CpeS |
CpeS-like protein | PF09367 | IPR018536 |
| CPL |
CPL (NUC119) domain | PF08144 | IPR012959 |
| Cpl-7 |
Cpl-7 lysozyme C-terminal domain | PF08230 | IPR013168 |
| Cpn10 |
Chaperonin 10 Kd subunit | PF00166 | IPR020818 |
| Cpn60_TCP1 |
TCP-1/cpn60 chaperonin family | PF00118 | IPR002423 |
| Cps15 |
Chromatin remodelling complex component cps15 | PF05205 | |
| CPSase_L_chain |
Carbamoyl-phosphate synthase L chain, N-terminal domain | PF00289 | IPR005481 |
| CPSase_L_D2 |
Carbamoyl-phosphate synthase L chain, ATP binding domain | PF02786 | IPR005479 |
| CPSase_L_D3 |
Carbamoyl-phosphate synthetase large chain, oligomerisation domain | PF02787 | IPR005480 |
| CPSase_sm_chain |
Carbamoyl-phosphate synthase small chain, CPSase domain | PF00988 | IPR002474 |
| CPSF_A |
CPSF A subunit region | PF03178 | IPR004871 |
| CPT |
Chloramphenicol phosphotransferase-like protein | PF07931 | IPR012853 |
| CPW_WPC |
Plasmodium falciparum domain of unknown function (CPW_WPC) | PF09717 | IPR006387 |
| CR6_interact |
Growth arrest and DNA-damage-inducible proteins-interacting protein 1 | PF10147 | IPR018472 |
| CRA |
Circumsporozoite-related antigen (CRA) | PF06589 | IPR009512 |
| CRAL_TRIO |
CRAL/TRIO domain | PF00650 | IPR001251 |
| CRAL_TRIO_N |
CRAL/TRIO, N-terminus | PF03765 | IPR008273 |
| CRAM_rpt |
Cysteine-rich, acidic integral membrane protein precursor (CRAM) repeat | PF07016 | IPR009745 |
| CRA_rpt |
Cytoplasmic repetitive antigen (CRA) like repeat | PF07046 | IPR009761 |
| CRCB |
CrcB-like protein | PF02537 | IPR003691 |
| CRC_subunit |
Chromatin remodelling complex subunit | PF08624 | IPR013933 |
| CreA |
CreA protein | PF05981 | IPR010292 |
| Creatinase_N |
Creatinase/Prolidase N-terminal domain | PF01321 | IPR000587 |
| Creatininase |
Creatinine amidohydrolase | PF02633 | IPR003785 |
| Creb_binding |
Creb binding | PF09030 | IPR014744 |
| CreD |
Inner membrane protein CreD | PF06123 | IPR010364 |
| CReP_N |
eIF2-alpha phosphatase phosphorylation constitutive repressor | PF10472 | IPR019512 |
| CRF |
Corticotropin-releasing factor family | PF00473 | IPR000187 |
| CRF-BP |
Corticotropin-releasing factor binding protein (CRF-BP) | PF05428 | IPR008435 |
| CRF1 |
Transcription factor CRF1 | PF10380 | IPR018837 |
| CRIC_ras_sig |
Connector enhancer of kinase suppressor of ras | PF10534 | IPR019555 |
| Crinivirus_P26 |
Crinivirus P26 protein | PF07416 | IPR009985 |
| Cript |
Microtubule-associated protein CRIPT | PF10235 | IPR019367 |
| Crisp |
Crisp | PF08562 | IPR013871 |
| CRISPR_assoc |
CRISPR associated protein | PF08798 | IPR010179 |
| CRISPR_Cas2 |
CRISPR associated protein Cas2 | PF09827 | IPR019199 |
| CRISPR_Cse1 |
CRISPR-associated protein Cse1 (CRISPR_cse1) | PF09481 | IPR013381 |
| CRISPR_Cse2 |
CRISPR-associated protein Cse2 (CRISPR_cse2) | PF09485 | IPR013382 |
| Crl |
Transcriptional regulator Crl | PF07417 | IPR009986 |
| CRM1_C |
CRM1 C terminal | PF08767 | IPR014877 |
| Cro |
Cro | PF09048 | IPR000655 |
| Crp |
Bacterial regulatory proteins, crp family | PF00325 | IPR001808 |
| CRPA |
Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) | PF05745 | IPR008436 |
| CRPV_capsid |
CRPV capsid protein like | PF08762 | IPR014872 |
| CRS1_YhbY |
CRS1 / YhbY (CRM) domain | PF01985 | IPR001890 |
| CRT-like |
CRT-like | PF08627 | IPR013936 |
| CRT10 |
CRT10 | PF08728 | IPR014839 |
| CrtC |
Hydroxyneurosporene synthase (CrtC) | PF07143 | IPR010791 |
| Crust_neurohorm |
Crustacean CHH/MIH/GIH neurohormone family | PF01147 | IPR001166 |
| Crust_neuro_H |
Crustacean neurohormone H | PF03858 | IPR005558 |
| CryBP1 |
CryBP1 protein | PF07029 | IPR009751 |
| Crystall |
Beta/Gamma crystallin | PF00030 | IPR001064 |
| Crystallin |
Alpha crystallin A chain, N terminal | PF00525 | IPR003090 |
| CS |
CS domain | PF04969 | IPR017447 |
| CsbD |
CsbD-like | PF05532 | IPR008462 |
| CSD |
'Cold-shock' DNA-binding domain | PF00313 | IPR002059 |
| Cse1 |
Cse1 | PF08506 | IPR013713 |
| CSE2 |
RNA polymerase II transcription mediator | PF07544 | IPR011425 |
| CSF-1 |
Macrophage colony stimulating factor-1 (CSF-1) | PF05337 | IPR008001 |
| CsgE |
Curli assembly protein CsgE | PF10627 | IPR018900 |
| CsgG |
Curli production assembly/transport component CsgG | PF03783 | IPR005534 |
| CsiD |
CsiD | PF08943 | IPR015038 |
| CsoSCA |
Carboxysome Shell Carbonic Anhydrase | PF08936 | IPR014074 |
| CsrA |
Global regulator protein family | PF02599 | IPR003751 |
| CST-I |
Alpha-2,3-sialyltransferase (CST-I) | PF06002 | IPR009251 |
| CstA |
Carbon starvation protein CstA | PF02554 | IPR003706 |
| CT20 |
CT20 family | PF07904 | IPR012423 |
| CtaG_Cox11 |
Cytochrome c oxidase assembly protein CtaG / Cox11 | PF04442 | IPR007533 |
| Ctf8 |
Ctf8 | PF09696 | IPR018607 |
| CTF_NFI |
CTF/NF-I family transcription modulation region | PF00859 | IPR000647 |
| CTI |
Fatty acid cis/trans isomerase (CTI) | PF06934 | IPR010706 |
| CtIP_N |
Tumour-suppressor protein CtIP N-terminal domain | PF10482 | IPR019518 |
| CtnDOT_TraJ |
Homologues of TraJ from Bacteroides conjugative transposon | PF07863 | IPR012424 |
| CTNNB1_binding |
N-terminal CTNNB1 binding | PF08347 | IPR013558 |
| CTP-dep_RFKase |
Domain of unknown function DUF120 | PF01982 | IPR002834 |
| CTP_synth_N |
CTP synthase N-terminus | PF06418 | IPR017456 |
| CTP_transf_1 |
Cytidylyltransferase family | PF01148 | IPR000374 |
| CTP_transf_2 |
Cytidylyltransferase | PF01467 | IPR004820 |
| CTP_transf_3 |
Cytidylyltransferase | PF02348 | IPR003329 |
| Ctr |
Ctr copper transporter family | PF04145 | IPR007274 |
| CtsR |
Firmicute transcriptional repressor of class III stress genes (CtsR) | PF05848 | IPR008463 |
| CTV_P13 |
Citrus tristeza virus P13 protein | PF06922 | IPR009692 |
| CTV_P23 |
Citrus tristeza virus (CTV) P23 protein | PF04808 | IPR006893 |
| CTV_P33 |
Citrus tristeza virus P33 protein | PF07184 | IPR010803 |
| CTV_P6 |
Citrus tristeza virus 6-kDa protein | PF06706 | IPR009584 |
| CTX_RstB |
CTX phage RstB protein | PF07459 | IPR010008 |
| Cu-oxidase |
Multicopper oxidase | PF00394 | IPR001117 |
| Cu-oxidase_2 |
Multicopper oxidase | PF07731 | IPR011706 |
| Cu-oxidase_3 |
Multicopper oxidase | PF07732 | IPR011707 |
| Cu-oxidase_4 |
Multi-copper polyphenol oxidoreductase laccase | PF02578 | IPR003730 |
| Cu2_monooxygen |
Copper type II ascorbate-dependent monooxygenase, N-terminal domain | PF01082 | IPR000323 |
| Cu2_monoox_C |
Copper type II ascorbate-dependent monooxygenase, C-terminal domain | PF03712 | |
| CUB |
CUB domain | PF00431 | IPR000859 |
| CUB_2 |
CUB-like domain | PF02408 | IPR003366 |
| Cucumo_2B |
Cucumovirus protein 2B | PF03263 | IPR004946 |
| Cucumo_coat |
Cucumovirus coat protein | PF00760 | IPR000247 |
| CUE |
CUE domain | PF02845 | IPR003892 |
| Cullin |
Cullin family | PF00888 | IPR001373 |
| Cullin_Nedd8 |
Cullin protein neddylation domain | PF10557 | IPR019559 |
| Cupin_1 |
Cupin | PF00190 | IPR006045 |
| Cupin_2 |
Cupin domain | PF07883 | IPR013096 |
| Cupin_3 |
Protein of unknown function (DUF861) | PF05899 | IPR008579 |
| Cupin_4 |
Cupin superfamily protein | PF08007 | |
| Cupin_5 |
Cupin superfamily (DUF985) | PF06172 | IPR009327 |
| Curlin_rpt |
Curlin associated repeat | PF07012 | IPR009742 |
| Curto_V2 |
Curtovirus V2 protein | PF07325 | IPR009931 |
| Curto_V3 |
Curtovirus V3 protein | PF07436 | IPR009997 |
| CUT |
CUT domain | PF02376 | IPR003350 |
| Cut8 |
Cut8 | PF08559 | IPR013868 |
| CutA1 |
CutA1 divalent ion tolerance protein | PF03091 | IPR004323 |
| CutC |
CutC family | PF03932 | IPR005627 |
| Cuticle_1 |
Crustacean cuticle protein repeat | PF08140 | IPR012539 |
| Cuticle_2 |
Cuticle protein 7 isoform family | PF08184 | IPR012540 |
| Cutinase |
Cutinase | PF01083 | IPR000675 |
| Cu_amine_oxid |
Copper amine oxidase, enzyme domain | PF01179 | IPR015798 |
| Cu_amine_oxidN1 |
Copper amine oxidase N-terminal domain | PF07833 | IPR012854 |
| Cu_amine_oxidN2 |
Copper amine oxidase, N2 domain | PF02727 | IPR015800 |
| Cu_amine_oxidN3 |
Copper amine oxidase, N3 domain | PF02728 | IPR015802 |
| Cu_bind_like |
Plastocyanin-like domain | PF02298 | IPR003245 |
| CVNH |
CVNH domain | PF08881 | IPR011058 |
| Cw-hydrolase |
Cell wall-associated hydrolase | PF10695 | IPR019636 |
| cwf18 |
cwf18 pre-mRNA splicing factor | PF08315 | IPR013169 |
| cwf21 |
cwf21 | PF08312 | IPR013170 |
| CwfJ_C_1 |
Protein similar to CwfJ C-terminus 1 | PF04677 | IPR006768 |
| CwfJ_C_2 |
Protein similar to CwfJ C-terminus 2 | PF04676 | IPR006767 |
| Cwf_Cwc_15 |
Cwf15/Cwc15 cell cycle control protein | PF04889 | IPR006973 |
| CW_binding_1 |
Putative cell wall binding repeat | PF01473 | IPR002479 |
| CW_binding_2 |
Putative cell wall binding repeat 2 | PF04122 | IPR007253 |
| CX |
CX module | PF01705 | IPR002619 |
| CXC |
Tesmin/TSO1-like CXC domain | PF03638 | IPR005172 |
| CXCXC |
CXCXC repeat | PF03128 | |
| CxxC_CxxC_SSSS |
Putative regulatory protein (CxxC_CxxC_SSSS) | PF09723 | IPR013429 |
| Cyanate_lyase |
Cyanate lyase C-terminal domain | PF02560 | IPR003712 |
| CybS |
CybS | PF05328 | IPR007992 |
| Cyc-maltodext_C |
Cyclo-malto-dextrinase C-terminal domain | PF10438 | IPR019492 |
| Cyc-maltodext_N |
Cyclomaltodextrinase, N-terminal | PF09087 | IPR015171 |
| Cyclase |
Putative cyclase | PF04199 | IPR007325 |
| Cyclase_polyket |
Polyketide synthesis cyclase | PF04673 | IPR006765 |
| Cyclin |
Cyclin | PF08613 | IPR013922 |
| Cyclin_C |
Cyclin, C-terminal domain | PF02984 | IPR004367 |
| Cyclin_N |
Cyclin, N-terminal domain | PF00134 | IPR006671 |
| Cyclotide |
Cyclotide family | PF03784 | IPR005535 |
| Cyd_oper_YbgE |
Cyd operon protein YbgE (Cyd_oper_YbgE) | PF09600 | IPR011846 |
| Cypo_polyhedrin |
Cypovirus polyhedrin protein | PF05865 | IPR008464 |
| CysG_dimeriser |
Sirohaem synthase dimerisation region | PF10414 | IPR019478 |
| Cystatin |
Cystatin domain | PF00031 | IPR000010 |
| Cys_knot |
Cystine-knot domain | PF00007 | IPR006208 |
| Cys_Met_Meta_PP |
Cys/Met metabolism PLP-dependent enzyme | PF01053 | IPR000277 |
| Cys_rich_FGFR |
Cysteine rich repeat | PF00839 | IPR001893 |
| Cyt-b5 |
Cytochrome b5-like Heme/Steroid binding domain | PF00173 | IPR001199 |
| Cytadhesin_P30 |
Cytadhesin P30/P32 | PF07271 | IPR009896 |
| CytB6-F_Fe-S |
Cytochrome B6-F complex Fe-S subunit | PF08802 | IPR014909 |
| CYTH |
CYTH domain | PF01928 | IPR008172 |
| Cytidylate_kin |
Cytidylate kinase | PF02224 | IPR011994 |
| CytochromB561_N |
Cytochrome B561, N terminal | PF09786 | IPR019176 |
| Cytochrome-c551 |
Photosystem P840 reaction-centre cytochrome c-551 | PF10643 | IPR019604 |
| Cytochrom_B558a |
Cytochrome Cytochrome b558 alpha-subunit | PF05038 | IPR007732 |
| Cytochrom_B559 |
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits | PF00283 | IPR013081 |
| Cytochrom_B559a |
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit | PF00284 | IPR013082 |
| Cytochrom_B561 |
Eukaryotic cytochrome b561 | PF03188 | IPR004877 |
| Cytochrom_B562 |
Cytochrome b562 | PF07361 | IPR009155 |
| Cytochrom_B_C |
Cytochrome b(C-terminal)/b6/petD | PF00032 | IPR005798 |
| Cytochrom_B_N |
Cytochrome b(N-terminal)/b6/petB | PF00033 | IPR005797 |
| Cytochrom_C |
Cytochrome c | PF00034 | IPR003088 |
| Cytochrom_C1 |
Cytochrome C1 family | PF02167 | IPR002326 |
| Cytochrom_C552 |
Cytochrome c552 | PF02335 | IPR003321 |
| Cytochrom_CIII |
Class III cytochrome C family | PF02085 | IPR020942 |
| Cytochrom_C_2 |
Cytochrome C' | PF01322 | IPR002321 |
| Cytochrom_C_asm |
Cytochrome C assembly protein | PF01578 | IPR002541 |
| Cytochrom_D1 |
Cytochrome D1 heme domain | PF02239 | |
| Cytochrom_NNT |
NapC/NirT cytochrome c family, N-terminal region | PF03264 | IPR005126 |
| CytoC_RC |
Photosynthetic reaction centre cytochrome C subunit | PF02276 | IPR003158 |
| Cytokin-bind |
Cytokinin dehydrogenase 1, FAD and cytokinin binding | PF09265 | IPR015345 |
| Cytokin_check_N |
Cdc14 phosphatase binding protein N-terminus | PF10407 | IPR018844 |
| Cytomega_gL |
Cytomegalovirus glycoprotein L | PF01801 | IPR002689 |
| Cytomega_TRL10 |
Cytomegalovirus TRL10 protein | PF06084 | IPR009284 |
| Cytomega_UL20A |
Cytomegalovirus UL20A protein | PF05984 | IPR009245 |
| Cytomega_UL84 |
Cytomegalovirus UL84 protein | PF06284 | IPR010436 |
| Cytomega_US3 |
Cytomegalovirus US3 protein | PF05963 | IPR009237 |
| Cytotoxic |
Cytotoxic | PF09000 | IPR009105 |
| Cyto_heme_lyase |
Cytochrome c/c1 heme lyase | PF01265 | IPR000511 |
| Cyto_ox_2 |
Cytochrome oxidase subunit II | PF02322 | IPR003317 |
| C_GCAxxG_C_C |
Putative redox-active protein (C_GCAxxG_C_C) | PF09719 | IPR010181 |
| C_tripleX |
Cysteine rich repeat | PF02363 | IPR003341 |
