Pfam ID Description Accession Interpro ID GO ID
rve Integrase core domain PF00665 IPR001584
GO:0003677
GO:0015074



rve forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
Integrase Integrase DNA binding domain PF00552 IPR001037
GO:0003676
GO:0008907
PDB IPFAM 3DID ME
rve Integrase core domain PF00665 IPR001584
GO:0003677
GO:0015074
PDB IPFAM 3DID ME
Integrase_Zn Integrase Zinc binding domain PF02022 IPR003308
GO:0003677
GO:0008270
GO:0008907
GO:0015074
PDB IPFAM 3DID ME
RnaseH RNase H PF00075 IPR002156
GO:0003676
GO:0004523
HCP ME FUSION
RVP Retroviral aspartyl protease PF00077 IPR018061
HCP ME FUSION
RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) PF00078 IPR000477
GO:0003723
GO:0003964
GO:0006278
HCP ME FUSION
Gag_p17 gag gene protein p17 (matrix protein) PF00540 IPR000071
GO:0005198
HCP ME
Gag_p24 gag gene protein p24 (core nucleocapsid protein) PF00607 IPR000721
GO:0016032
HCP ME FUSION
dUTPase dUTPase PF00692 IPR008180
GO:0016787
GO:0046080
HCP ME FUSION
RVT_connect Reverse transcriptase connection domain PF06815 IPR010659
GO:0003964
GO:0006278
HCP ME
RVT_thumb Reverse transcriptase thumb domain PF06817 IPR010661
GO:0003964
GO:0006278
HCP ME
HLH Helix-loop-helix DNA-binding domain PF00010 IPR001092
GO:0030528
GO:0045449
LCP KGIDDI
zf-CCHC Zinc knuckle PF00098 IPR001878
GO:0003676
GO:0008270
LCP FUSION
TYA TYA transposon protein PF01021 IPR015820
GO:0003723
GO:0005737
LCP FUSION
LSM LSM domain PF01423 IPR001163
LCP RDFF
Transposase_8 Transposase PF01527 IPR002514
GO:0003677
GO:0004803
GO:0006313
LCP FUSION
Transposase_12 Transposase PF01610 IPR002560
GO:0003677
GO:0004803
GO:0006313
LCP FUSION
Spuma_A9PTase Spumavirus aspartic protease (A9) PF03539 IPR001641
GO:0004190
GO:0006508
LCP FUSION




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