Pfam ID Description Accession Interpro ID GO ID
Sigma70_r4 Sigma-70, region 4 PF04545 IPR007630
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987



Sigma70_r4 forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 PF00562 IPR007120
GO:0003677
GO:0003899
GO:0006350
PDB IPFAM 3DID
HTH_3 Helix-turn-helix PF01381 IPR001387
GO:0043565
PDB IPFAM 3DID
Sugar-bind Putative sugar-binding domain PF04198 IPR007324
GO:0030246
GO:0030528
PDB 3DID
FlgM Anti-sigma-28 factor, FlgM PF04316 IPR007412
GO:0016481
GO:0016564
GO:0019861
PDB IPFAM 3DID
Rsd_AlgQ Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PF04353 IPR007448
GO:0030528
GO:0045449
PDB 3DID
Sigma70_r3 Sigma-70 region 3 PF04539 IPR007624
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
PDB IPFAM 3DID ME DIPD
Sigma70_r2 Sigma-70 region 2 PF04542 IPR007627
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
PDB IPFAM 3DID ME DIPD
Sigma70_r4 Sigma-70, region 4 PF04545 IPR007630
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
PDB IPFAM 3DID DIPD
RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 PF04997 IPR007080
GO:0003677
GO:0003899
GO:0006350
PDB IPFAM 3DID GPE
AsiA Anti-Sigma Factor A PF09010 IPR015100
PDB IPFAM 3DID
Sigma70_r1_2 Sigma-70 factor, region 1.2 PF00140 IPR009042
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
HCP ME DIPD
Transposase_17 Transposase IS200 like PF01797 IPR002686
GO:0003677
GO:0004803
GO:0006313
MCP GPE DIPD
Sigma70_ner Sigma-70, non-essential region PF04546 IPR007631
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
MCP DIPD
RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 PF00623 IPR000722
GO:0003677
GO:0003899
GO:0006350
LCP GPE
RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 PF04983 IPR007066
GO:0003677
GO:0003899
GO:0006350
LCP GPE
RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 PF04998 IPR007081
GO:0003677
GO:0003899
GO:0006350
LCP GPE
RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 PF05000 IPR007083
GO:0003677
GO:0003899
GO:0006350
LCP GPE




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