PBP_dimer

• Pfam ID: PBP_dimer
• Description: Penicillin-binding Protein dimerisation domain
• Accession: PF03717
• Interpro ID: IPR005311
• GO ID:

  GO:0008658

PBP_dimer forms interactions with

Pfam ID	Description	Accession	Interpro ID	GO ID	Notes	Source
Transpeptidase	Penicillin binding protein transpeptidase domain	PF00905	IPR001460	GO:0008658 GO:0009273
PBP_dimer	Penicillin-binding Protein dimerisation domain	PF03717	IPR005311	GO:0008658
PASTA	PASTA domain	PF03793	IPR005543	GO:0008658
MecA_N	NTF2-like N-terminal transpeptidase domain	PF05223	IPR007887	GO:0046677
dsrm	Double-stranded RNA binding motif	PF00035	IPR001159	GO:0003725 GO:0005622
Sigma70_r1_2	Sigma-70 factor, region 1.2	PF00140	IPR009042	GO:0003677 GO:0003700 GO:0006352 GO:0006355 GO:0016987
RecA	recA bacterial DNA recombination protein	PF00154	IPR013765	GO:0003697 GO:0005524 GO:0006281
Cpn10	Chaperonin 10 Kd subunit	PF00166	IPR020818	GO:0005737 GO:0006457
Bac_DNA_binding	Bacterial DNA-binding protein	PF00216	IPR000119	GO:0003677
Bac_DnaA	Bacterial dnaA protein	PF00308	IPR013317
Ribosomal_S3_N	Ribosomal protein S3, N-terminal domain	PF00417	IPR008282	GO:0003735 GO:0005622 GO:0005840 GO:0006412
SSB	Single-strand binding protein family	PF00436	IPR000424	GO:0003697
Ribosomal_L20	Ribosomal protein L20	PF00453	IPR005813	GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0019843
DNA_pol_A	DNA polymerase family A	PF00476	IPR001098	GO:0003677 GO:0003887 GO:0006260
BRCT	BRCA1 C Terminus (BRCT) domain	PF00533	IPR001357	GO:0005622
PP-binding	Phosphopantetheine attachment site	PF00550	IPR006163	GO:0048037
CLP_protease	Clp protease	PF00574	IPR001907	GO:0004252 GO:0006508
Ribonuclease_3	RNase3 domain	PF00636	IPR000999	GO:0003723 GO:0004525 GO:0006396
IF3_C	Translation initiation factor IF-3, C-terminal domain	PF00707	IPR019815	GO:0003743 GO:0006413
DNA_pol3_beta	DNA polymerase III beta subunit, N-terminal domain	PF00712	IPR022634	GO:0003677 GO:0003887 GO:0006260 GO:0008408 GO:0009360
DnaB	DnaB-like helicase N terminal domain	PF00772	IPR007693	GO:0003678 GO:0005524 GO:0006260
Ribosomal_L21p	Ribosomal prokaryotic L21 protein	PF00829	IPR001787	GO:0003723 GO:0003735 GO:0005622 GO:0005840 GO:0006412
EF_TS	Elongation factor TS	PF00889	IPR014039	GO:0003746 GO:0005622 GO:0006414
Transgly	Transglycosylase	PF00912	IPR001264	GO:0003824 GO:0009252 GO:0009274
RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain	PF01000	IPR011262	GO:0003899 GO:0006350 GO:0046983
NusB	NusB family	PF01029	IPR006027	GO:0003723 GO:0006355
SecA_PP_bind	SecA preprotein cross-linking domain	PF01043	IPR011130	GO:0005515 GO:0016020 GO:0017038
FTSW_RODA_SPOVE	Cell cycle protein	PF01098	IPR001182	GO:0007049 GO:0016021
EFP	Elongation factor P (EF-P) OB domain	PF01132	IPR001059	GO:0003746 GO:0006414
Dus	Dihydrouridine synthase (Dus)	PF01207	IPR001269	GO:0008033 GO:0017150 GO:0050660 GO:0055114
Mur_ligase	Mur ligase family, catalytic domain	PF01225	IPR000713	GO:0005524 GO:0009058
Ribosomal_L19	Ribosomal protein L19	PF01245	IPR001857	GO:0003735 GO:0005622 GO:0005840 GO:0006412
Ribosomal_S6	Ribosomal protein S6	PF01250	IPR000529	GO:0003735 GO:0005840 GO:0006412 GO:0019843
Peptidase_A8	Signal peptidase (SPase) II	PF01252	IPR001872	GO:0004190 GO:0006508 GO:0016020
Ribosomal_L9_N	Ribosomal protein L9, N-terminal domain	PF01281	IPR020070
Pep_deformylase	Polypeptide deformylase	PF01327	IPR000181	GO:0005506 GO:0006412 GO:0042586
5_3_exonuc	5'-3' exonuclease, C-terminal SAM fold	PF01367	IPR020047	GO:0003677 GO:0008409
LysM	LysM domain	PF01476	IPR018392	GO:0016998
Ribosomal_L35p	Ribosomal protein L35	PF01632	IPR021137	GO:0003735 GO:0005622 GO:0005840 GO:0006412
Ribosomal_S20p	Ribosomal protein S20	PF01649	IPR002583	GO:0003723 GO:0003735 GO:0005622 GO:0005840 GO:0006412
DNA_ligase_aden	NAD-dependent DNA ligase adenylation domain	PF01653	IPR013839	GO:0003911
SmpB	SmpB protein	PF01668	IPR000037	GO:0003723 GO:0006412
IPPT	IPP transferase	PF01715	IPR002627	GO:0004811 GO:0005524 GO:0008033
PolyA_pol	Poly A polymerase head domain	PF01743	IPR002646	GO:0003723 GO:0006396 GO:0016779
tRNA_m1G_MT	tRNA (Guanine-1)-methyltransferase	PF01746	IPR016009
RimM	RimM N-terminal domain	PF01782	IPR002676	GO:0006364
LGT	Prolipoprotein diacylglyceryl transferase	PF01790	IPR001640	GO:0009249 GO:0016020 GO:0016757 GO:0042158
Methyltransf_5	MraW methylase family	PF01795	IPR002903	GO:0008168
zf-CHC2	CHC2 zinc finger	PF01807	IPR002694	GO:0003677 GO:0003896 GO:0006260 GO:0008270
Dala_Dala_lig_N	D-ala D-ala ligase N-terminus	PF01820	IPR011127	GO:0005618 GO:0008716 GO:0009252
RBFA	Ribosome-binding factor A	PF02033	IPR000238	GO:0006364
NusG	Transcription termination factor nusG	PF02357	IPR006645	GO:0003711 GO:0032968
UPF0079	Uncharacterised P-loop hydrolase UPF0079	PF02367	IPR003442
DUF143	Domain of unknown function DUF143	PF02410	IPR004394
DUF150	Uncharacterised BCR, YhbC family COG0779	PF02576	IPR003728
5_3_exonuc_N	5'-3' exonuclease, N-terminal resolvase-like domain	PF02739	IPR020046	GO:0003677 GO:0008409
DNA_pol3_beta_2	DNA polymerase III beta subunit, central domain	PF02767	IPR022637	GO:0003677 GO:0003887 GO:0006260 GO:0008408 GO:0009360
DNA_pol3_beta_3	DNA polymerase III beta subunit, C-terminal domain	PF02768	IPR022635	GO:0003677 GO:0003887 GO:0006260 GO:0008408 GO:0009360
MurB_C	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain	PF02873	IPR011601	GO:0008762 GO:0009252 GO:0055114
Formyl_trans_C	Formyl transferase, C-terminal domain	PF02911	IPR005793	GO:0009058 GO:0016742
Phe_tRNA-synt_N	Aminoacyl tRNA synthetase class II, N-terminal domain	PF02912	IPR004188	GO:0000166 GO:0004826 GO:0005524 GO:0005737 GO:0006412 GO:0006432
Glyco_transf_28	Glycosyltransferase family 28 N-terminal domain	PF03033	IPR004276	GO:0005975 GO:0016758 GO:0030259
RNA_pol_A_CTD	Bacterial RNA polymerase, alpha chain C terminal domain	PF03118	IPR011260	GO:0003677 GO:0003899 GO:0006350
DNA_ligase_OB	NAD-dependent DNA ligase OB-fold domain	PF03120	IPR004150	GO:0003911 GO:0006260 GO:0006281
TRCF	TRCF domain	PF03461	IPR005118	GO:0003684 GO:0004386 GO:0005524 GO:0006281
CorC_HlyC	Transporter associated domain	PF03471	IPR005170
Cons_hypoth95	Conserved hypothetical protein 95	PF03602	IPR004398	GO:0008168 GO:0031167
Competence	Competence protein	PF03772	IPR004477
DnaB_C	DnaB-like helicase C terminal domain	PF03796	IPR007694	GO:0003678 GO:0005524 GO:0006260
SecG	Preprotein translocase SecG subunit	PF03840	IPR004692	GO:0009306 GO:0015450 GO:0016021