Pfam ID
Description
Accession
Interpro ID
GO ID
Cytidylate_kin
Cytidylate kinase
PF02224
IPR011994
GO:0004127
GO:0005524
GO:0006139
Cytidylate_kin
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Cytidylate_kin
Cytidylate kinase
PF02224
IPR011994
GO:0004127
GO:0005524
GO:0006139
ADK
Adenylate kinase
PF00406
IPR000850
GO:0005524
GO:0006139
GO:0019205
Sigma70_r1_2
Sigma-70 factor, region 1.2
PF00140
IPR009042
GO:0003677
GO:0003700
GO:0006352
GO:0006355
GO:0016987
RecA
recA bacterial DNA recombination protein
PF00154
IPR013765
GO:0003697
GO:0005524
GO:0006281
Bac_DnaA
Bacterial dnaA protein
PF00308
IPR013317
Ribosomal_S3_N
Ribosomal protein S3, N-terminal domain
PF00417
IPR008282
GO:0003735
GO:0005622
GO:0005840
GO:0006412
SSB
Single-strand binding protein family
PF00436
IPR000424
GO:0003697
Ribosomal_L20
Ribosomal protein L20
PF00453
IPR005813
GO:0003735
GO:0005622
GO:0005840
GO:0006412
GO:0019843
Ribosomal_L33
Ribosomal protein L33
PF00471
IPR001705
GO:0003735
GO:0005622
GO:0005840
GO:0006412
IF3_C
Translation initiation factor IF-3, C-terminal domain
PF00707
IPR019815
GO:0003743
GO:0006413
DnaB
DnaB-like helicase N terminal domain
PF00772
IPR007693
GO:0003678
GO:0005524
GO:0006260
Ribosomal_L21p
Ribosomal prokaryotic L21 protein
PF00829
IPR001787
GO:0003723
GO:0003735
GO:0005622
GO:0005840
GO:0006412
EF_TS
Elongation factor TS
PF00889
IPR014039
GO:0003746
GO:0005622
GO:0006414
RNA_pol_A_bac
RNA polymerase Rpb3/RpoA insert domain
PF01000
IPR011262
GO:0003899
GO:0006350
GO:0046983
SecA_PP_bind
SecA preprotein cross-linking domain
PF01043
IPR011130
GO:0005515
GO:0016020
GO:0017038
Ribosomal_S18
Ribosomal protein S18
PF01084
IPR001648
GO:0003735
GO:0005622
GO:0005840
GO:0006412
EFP
Elongation factor P (EF-P) OB domain
PF01132
IPR001059
GO:0003746
GO:0006414
Ribosomal_L19
Ribosomal protein L19
PF01245
IPR001857
GO:0003735
GO:0005622
GO:0005840
GO:0006412
Ribosomal_S6
Ribosomal protein S6
PF01250
IPR000529
GO:0003735
GO:0005840
GO:0006412
GO:0019843
Ribosomal_L9_N
Ribosomal protein L9, N-terminal domain
PF01281
IPR020070
Pep_deformylase
Polypeptide deformylase
PF01327
IPR000181
GO:0005506
GO:0006412
GO:0042586
RuvA_N
RuvA N terminal domain
PF01330
IPR013849
GO:0005524
GO:0006281
GO:0006310
GO:0009378
5_3_exonuc
5'-3' exonuclease, C-terminal SAM fold
PF01367
IPR020047
GO:0003677
GO:0008409
Peptidase_M41
Peptidase family M41
PF01434
IPR000642
GO:0004222
GO:0005524
GO:0006508
Acyltransferase
Acyltransferase
PF01553
IPR002123
GO:0008152
GO:0008415
Ribosomal_L35p
Ribosomal protein L35
PF01632
IPR021137
GO:0003735
GO:0005622
GO:0005840
GO:0006412
Ribosomal_S20p
Ribosomal protein S20
PF01649
IPR002583
GO:0003723
GO:0003735
GO:0005622
GO:0005840
GO:0006412
DNA_ligase_aden
NAD-dependent DNA ligase adenylation domain
PF01653
IPR013839
GO:0003911
SmpB
SmpB protein
PF01668
IPR000037
GO:0003723
GO:0006412
tRNA_m1G_MT
tRNA (Guanine-1)-methyltransferase
PF01746
IPR016009
LGT
Prolipoprotein diacylglyceryl transferase
PF01790
IPR001640
GO:0009249
GO:0016020
GO:0016757
GO:0042158
Methyltransf_5
MraW methylase family
PF01795
IPR002903
GO:0008168
zf-CHC2
CHC2 zinc finger
PF01807
IPR002694
GO:0003677
GO:0003896
GO:0006260
GO:0008270
NusG
Transcription termination factor nusG
PF02357
IPR006645
GO:0003711
GO:0032968
UPF0079
Uncharacterised P-loop hydrolase UPF0079
PF02367
IPR003442
GidB
Glucose inhibited division protein
PF02527
IPR003682
GO:0005737
GO:0006364
GO:0008649
5_3_exonuc_N
5'-3' exonuclease, N-terminal resolvase-like domain
PF02739
IPR020046
GO:0003677
GO:0008409
Formyl_trans_C
Formyl transferase, C-terminal domain
PF02911
IPR005793
GO:0009058
GO:0016742
RNA_pol_A_CTD
Bacterial RNA polymerase, alpha chain C terminal domain
PF03118
IPR011260
GO:0003677
GO:0003899
GO:0006350
DNA_ligase_OB
NAD-dependent DNA ligase OB-fold domain
PF03120
IPR004150
GO:0003911
GO:0006260
GO:0006281
Competence
Competence protein
PF03772
IPR004477
DnaB_C
DnaB-like helicase C terminal domain
PF03796
IPR007694
GO:0003678
GO:0005524
GO:0006260
Terms of use
Copyright © 2007, Raghavachari et al.
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