Pfam ID
Description
Accession
Interpro ID
GO ID
S4
S4 domain
PF01479
IPR002942
GO:0003723
S4
forms interactions with
Pfam ID
Description
Accession
Interpro ID
GO ID
Notes
Source
Ribosomal_S4
Ribosomal protein S4/S9 N-terminal domain
PF00163
IPR001912
GO:0005622
GO:0019843
tRNA-synt_1b
tRNA synthetases class I (W and Y)
PF00579
IPR002305
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
PseudoU_synth_2
RNA pseudouridylate synthase
PF00849
IPR006145
GO:0001522
GO:0003723
GO:0009451
GO:0009982
S4
S4 domain
PF01479
IPR002942
GO:0003723
KOW
KOW motif
PF00467
IPR005824
FtsJ
FtsJ-like methyltransferase
PF01728
IPR002877
GO:0003676
GO:0008168
GO:0032259
Ribosomal_S2
Ribosomal protein S2
PF00318
IPR001865
GO:0003735
GO:0005622
GO:0005840
GO:0006412
C_tripleX
Cysteine rich repeat
PF02363
IPR003341
DUF1096
Protein of unknown function (DUF1096)
PF06493
IPR009475
RRM_1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00076
IPR000504
GO:0003676
Ribosomal_S5
Ribosomal protein S5, N-terminal domain
PF00333
IPR013810
GO:0003723
GO:0003735
GO:0005622
GO:0005840
GO:0006412
WD40
WD domain, G-beta repeat
PF00400
IPR019781
Ribosomal_S11
Ribosomal protein S11
PF00411
IPR001971
GO:0003735
GO:0005622
GO:0005840
GO:0006412
Ribosomal_S4e
Ribosomal family S4e
PF00900
IPR013845
Ribosomal_S26e
Ribosomal protein S26e
PF01283
IPR000892
GO:0003735
GO:0005622
GO:0005840
GO:0006412
IF4E
Eukaryotic initiation factor 4E
PF01652
IPR001040
GO:0003723
GO:0003743
GO:0005737
GO:0006413
Ribosomal_S5_C
Ribosomal protein S5, C-terminal domain
PF03719
IPR005324
GO:0003735
GO:0005622
GO:0005840
GO:0006412
Mpp10
Mpp10 protein
PF04006
IPR007151
PWP2
Periodic tryptophan protein 2 WD repeat associated presumed domain
PF04047
Bystin
Bystin
PF05291
IPR007955
SPC12
Microsomal signal peptidase 12 kDa subunit (SPC12)
PF06645
IPR009542
GO:0005787
GO:0006465
GO:0008233
GO:0016021
U3_snoRNA_assoc
U3 snoRNA associated
PF08297
IPR013268
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Copyright © 2007, Raghavachari et al.
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