Pfam ID Description Accession Interpro ID GO ID
S4 S4 domain PF01479 IPR002942
GO:0003723



S4 forms interactions with

Pfam ID Description Accession Interpro ID GO ID Notes Source
Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain PF00163 IPR001912
GO:0005622
GO:0019843
PDB IPFAM 3DID ME
tRNA-synt_1b tRNA synthetases class I (W and Y) PF00579 IPR002305
GO:0000166
GO:0004812
GO:0005524
GO:0005737
GO:0006412
GO:0006418
PDB IPFAM ME FUSION
PseudoU_synth_2 RNA pseudouridylate synthase PF00849 IPR006145
GO:0001522
GO:0003723
GO:0009451
GO:0009982
PDB IPFAM 3DID ME FUSION
S4 S4 domain PF01479 IPR002942
GO:0003723
PDB IPFAM
KOW KOW motif PF00467 IPR005824
HCP ME FUSION
FtsJ FtsJ-like methyltransferase PF01728 IPR002877
GO:0003676
GO:0008168
GO:0032259
HCP ME FUSION
Ribosomal_S2 Ribosomal protein S2 PF00318 IPR001865
GO:0003735
GO:0005622
GO:0005840
GO:0006412
MCP RDFF INSITE
C_tripleX Cysteine rich repeat PF02363 IPR003341
MCP GPE DIPD
DUF1096 Protein of unknown function (DUF1096) PF06493 IPR009475
MCP GPE DIPD
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PF00076 IPR000504
GO:0003676
LCP KGIDDI
Ribosomal_S5 Ribosomal protein S5, N-terminal domain PF00333 IPR013810
GO:0003723
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIPD
WD40 WD domain, G-beta repeat PF00400 IPR019781
LCP RDFF
Ribosomal_S11 Ribosomal protein S11 PF00411 IPR001971
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DOMAINGA
Ribosomal_S4e Ribosomal family S4e PF00900 IPR013845
LCP FUSION
Ribosomal_S26e Ribosomal protein S26e PF01283 IPR000892
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DOMAINGA
IF4E Eukaryotic initiation factor 4E PF01652 IPR001040
GO:0003723
GO:0003743
GO:0005737
GO:0006413
LCP INSITE
Ribosomal_S5_C Ribosomal protein S5, C-terminal domain PF03719 IPR005324
GO:0003735
GO:0005622
GO:0005840
GO:0006412
LCP DIPD
Mpp10 Mpp10 protein PF04006 IPR007151
LCP INSITE
PWP2 Periodic tryptophan protein 2 WD repeat associated presumed domain PF04047
LCP DIPD
Bystin Bystin PF05291 IPR007955
LCP DIPD
SPC12 Microsomal signal peptidase 12 kDa subunit (SPC12) PF06645 IPR009542
GO:0005787
GO:0006465
GO:0008233
GO:0016021
LCP INSITE
U3_snoRNA_assoc U3 snoRNA associated PF08297 IPR013268
LCP INSITE




Terms of use
Copyright © 2007, Raghavachari et al.
Comments or questions on the site? Send an email to jothi AT mail.nih.gov